CmoCh05G008530 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G008530
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Pectin lyase-like superfamily protein
Location	Cmo_Chr05 : 5436446 .. 5437796 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATTAATACCACTGTTGCTATTGTTGGTGTCTAATGCTACCGCTGATGCTACTAGCGGTGTTTTTGATATTACGACATTTGGTGCCAAACCTAATAATGATGTTACTCTAAGTTGATAAACCAAAATTTCATTTTGTACAAAATATTTTTCTCAAATGAAATGGTTGAATTCACCGGCTTTAGCAGATGCATGGAAGGAAGCATGTATTTCGGCTACTCCAAGTAAAGTATTGGTTCTAAAAGGAACTTATCAATTAGGAGCATCCACACTCAAAGGTCCATGTAAAGGTCCTATTGAGCTTCTAGTTGAAGGAACATTACAAGCTTCTCCTACCGGAAGGAGATGGGTTGCTTGTTATGGAATACTTCGATCATTTGACATTGTCTGGTACTGGAGTTTTCGATGGCCAAGGAAAAGCTTGTTGGGAAAAGAATGATTGCCACATGAAGAAAGAATGCAAAAAGCTTCCCATGGTAAATGCTCGTACTACTTTAATTATAAAAAGAACTCGTAATTTGGGTTAGCATTATATGCTTTAACATGGGAGTGTTTTTTCTTTGTTTGTTTAAAATGGGCAGAATTTGAAGTTCAATTTCATCACAAATTCGATAGTGAAGGACATAACTTCATTGGATAGCAAGAATTTTCATATCAATGTTTTGACGGGCAAGAATCTTACCTTCGATCACCTGAAAATTACTGCACCAGACAATAGTCCCAACACCGATGGAATTTACTTGGGCGATTCAGAAGACGTTTACATTCTCAATACCGTAATCGCAACGGGAGATGATTGTATATCTGTAGGATACACTAACAGAAAAATAACCATTAGTGATGTTACTTGCGGACAGGGACATGACATTAGCATAGGCAGGTTGGGCAAGTATAAAACTGAAAAAGAACTGGTAGGAGTTACCGTGAAGAAATGCAAATTAATCGGTACTACAAATGGTGTCAGGATCAAATCATGGTCAGATTCGGCCGTCTCATACCCAACCTCTAACATGCATTTTGAAGATATTGAAATGGATAATGTTGCTAACCCTATCATCATAGATCAAGAATATTGTCCATGGAATCAATGCAACCGAAAGGTGTGTATTAAAATTGAACCTCCTTGGTTTCCAACTTATTATCTTTTGAACAAGTATTAATTAATGTTTACTTTGAACATCCAGGTTCCATCAGCAATTAAGATTAGCAAAGTTAGTTTCAAGAACTTCAGGGGCACATCTTCAACTCGGTTGCAGTCAAGCTTGTTTGCAGTAAAAGTAATCCATGTGAGGATGTGGAATTTCCTGATATTGACCTCACTTATAGTGGTAAAGAAGGGTCAATTGTGA

mRNA sequence

ATGGCATTAATACCACTGTTGCTATTGTTGGTGTCTAATGCTACCGCTGATGCTACTAGCGGTGTTTTTGATATTACGACATTTGGTGCCAAACCTAATAATGATGAACATTACAAGCTTCTCCTACCGGAAGGAGATGGGTTGCTTGTTATGGAATACTTCGATCATTTGACATTGTCTGGTACTGGAGTTTTCGATGGCCAAGGAAAAGCTTGTTGGGAAAAGAATGATTGCCACATGAAGAAAGAATGCAAAAAGCTTCCCATGAATTTGAAGTTCAATTTCATCACAAATTCGATAGTGAAGGACATAACTTCATTGGATAGCAAGAATTTTCATATCAATGTTTTGACGGGCAAGAATCTTACCTTCGATCACCTGAAAATTACTGCACCAGACAATAGTCCCAACACCGATGGAATTTACTTGGGCGATTCAGAAGACGTTTACATTCTCAATACCGTAATCGCAACGGGAGATGATTGTATATCTGTAGGATACACTAACAGAAAAATAACCATTAGTGATGTTACTTGCGGACAGGGACATGACATTAGCATAGGCAGGTTGGGCAAGTATAAAACTGAAAAAGAACTGGTAGGAGTTACCGTGAAGAAATGCAAATTAATCGGTACTACAAATGGTGTCAGGATCAAATCATGGTCAGATTCGGCCGTCTCATACCCAACCTCTAACATGCATTTTGAAGATATTGAAATGGATAATGTTGCTAACCCTATCATCATAGATCAAGAATATTGTCCATGGAATCAATGCAACCGAAAGGTTCCATCAGCAATTAAGATTAGCAAAGTTAGTTTCAAGAACTTCAGGGGCACATCTTCAACTCGGTTGCAGTCAAGCTTGTTTGCAGTAAAAGTAATCCATGTGAGGATGTGGAATTTCCTGATATTGACCTCACTTATAGTGGTAAAGAAGGGTCAATTGTGA

Coding sequence (CDS)

ATGGCATTAATACCACTGTTGCTATTGTTGGTGTCTAATGCTACCGCTGATGCTACTAGCGGTGTTTTTGATATTACGACATTTGGTGCCAAACCTAATAATGATGAACATTACAAGCTTCTCCTACCGGAAGGAGATGGGTTGCTTGTTATGGAATACTTCGATCATTTGACATTGTCTGGTACTGGAGTTTTCGATGGCCAAGGAAAAGCTTGTTGGGAAAAGAATGATTGCCACATGAAGAAAGAATGCAAAAAGCTTCCCATGAATTTGAAGTTCAATTTCATCACAAATTCGATAGTGAAGGACATAACTTCATTGGATAGCAAGAATTTTCATATCAATGTTTTGACGGGCAAGAATCTTACCTTCGATCACCTGAAAATTACTGCACCAGACAATAGTCCCAACACCGATGGAATTTACTTGGGCGATTCAGAAGACGTTTACATTCTCAATACCGTAATCGCAACGGGAGATGATTGTATATCTGTAGGATACACTAACAGAAAAATAACCATTAGTGATGTTACTTGCGGACAGGGACATGACATTAGCATAGGCAGGTTGGGCAAGTATAAAACTGAAAAAGAACTGGTAGGAGTTACCGTGAAGAAATGCAAATTAATCGGTACTACAAATGGTGTCAGGATCAAATCATGGTCAGATTCGGCCGTCTCATACCCAACCTCTAACATGCATTTTGAAGATATTGAAATGGATAATGTTGCTAACCCTATCATCATAGATCAAGAATATTGTCCATGGAATCAATGCAACCGAAAGGTTCCATCAGCAATTAAGATTAGCAAAGTTAGTTTCAAGAACTTCAGGGGCACATCTTCAACTCGGTTGCAGTCAAGCTTGTTTGCAGTAAAAGTAATCCATGTGAGGATGTGGAATTTCCTGATATTGACCTCACTTATAGTGGTAAAGAAGGGTCAATTGTGA

Homology

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BLAST of CmoCh05G008530 vs. Swiss-Prot
Match: PGLR_BRANA (Polygalacturonase OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.4e-77
Identity = 130/239 (54.39%), Postives = 177/239 (74.06%), Query Frame = 1


Query: 46  DGLLVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDIT 105
           D  +V E  +   L+G G FDG+G A W+ N+CH   ECKKLP++++F+F+ N+ +KD+T
Sbjct: 96  DRWVVFEKINGFKLNGGGTFDGEGNAAWKANNCHKTFECKKLPISVRFDFVDNAEIKDVT 155

Query: 106 SLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIATGDDCISV 165
           SLD+KNFH NV++GKN+TFD++KI AP  SPNTDGI+LG  E V ILNT IATGDDCISV
Sbjct: 156 SLDAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEGVKILNTKIATGDDCISV 215

Query: 166 GYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSA 225
           G   + + I  V CG GH IS+G LG+Y  E+++  +TVK C L GT+NG+RIK+W  +A
Sbjct: 216 GDGMKNLLIEKVVCGPGHGISVGSLGRYGWEQDVTDITVKNCTLEGTSNGLRIKTWPSAA 275

Query: 226 VSYPTSNMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTR 285
            +   + +HFEDI ++ V+NPI+IDQEYCPWNQCN+  PS IK+  ++F+N RGTS  +
Sbjct: 276 CTTTAAGIHFEDIILNKVSNPILIDQEYCPWNQCNKNKPSTIKLVDITFRNIRGTSENK 334

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BLAST of CmoCh05G008530 vs. Swiss-Prot
Match: PGLR_OENOR (Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 4.1e-74
Identity = 131/242 (54.13%), Postives = 179/242 (73.97%), Query Frame = 1


Query: 44  EGDGLLVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKE-CKKLPMNLKFNFITNSIVK 103
           +G G + +   D LT+ G GVFDGQGK+ W +NDCH     CK L MNL+   +TNSI++
Sbjct: 62  KGLGWINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSILR 121

Query: 104 DITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIATGDDC 163
           D+T+LDSKNFH+NV+  KNLTF+  KI+A + S NTDGI++G S+ V I+NT I TGDDC
Sbjct: 122 DVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDDC 181

Query: 164 ISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWS 223
           IS+G  ++ I I+++TCG GH IS+G LG+YK E+ +VG+ VK C + G+ NGVRIK+W 
Sbjct: 182 ISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTWP 241

Query: 224 DSAVSYPTSNMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSS 283
            S      S MHF+DI M++V  PI+IDQ YCP+NQC  +VPS++K+SK+SFKN +GTS+
Sbjct: 242 KSEPG-EASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTST 301

Query: 284 TR 285
           T+
Sbjct: 302 TK 302

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BLAST of CmoCh05G008530 vs. Swiss-Prot
Match: PGLR_MEDSA (Polygalacturonase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.2e-73
Identity = 134/235 (57.02%), Postives = 169/235 (71.91%), Query Frame = 1


Query: 53  YFDHLTLSGTGVFDGQGKACWEK----NDCHMKKECKKLPMNLKFNFITNSIVKDITSLD 112
           Y DHLTLSG GVFDGQG   ++K    +    K    K+ MN  FNF+ NSIV+ +TS D
Sbjct: 108 YMDHLTLSGKGVFDGQGATVYKKAAPASAWSGKNSNSKVFMNFGFNFVNNSIVRGVTSKD 167

Query: 113 SKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIATGDDCISVGYT 172
           SKNFH+ V   KN+TFD   ITAP +SPNTDGI++G S DV ILNT I TGDDC+S+G  
Sbjct: 168 SKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVSIGDG 227

Query: 173 NRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSY 232
           +++IT+  V CG GH +S+G LGK+ TE+ + G+TVK C L  T NGVRIK+W D+  + 
Sbjct: 228 SKQITVQGVNCGPGHGLSVGSLGKFTTEENVEGITVKNCTLTATDNGVRIKTWPDAPGTI 287

Query: 233 PTSNMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSST 284
             S++HFEDI M NV NP+IIDQEY PWNQC++K PS IK+SK+SFKN +GTS T
Sbjct: 288 TVSDIHFEDITMTNVKNPVIIDQEYYPWNQCSKKNPSKIKLSKISFKNVKGTSGT 342

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BLAST of CmoCh05G008530 vs. Swiss-Prot
Match: PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.5e-71
Identity = 126/242 (52.07%), Postives = 174/242 (71.90%), Query Frame = 1


Query: 44  EGDGLLVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKD 103
           + DG +     D LT+SGTG  DGQG+  W KN+C     CK   MNL+F+F+ +++V+D
Sbjct: 84  KSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCKHAAMNLRFDFLKHAMVRD 143

Query: 104 ITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIATGDDCI 163
           ITSL+SK FHINVL  +++TF H+ +TAP  S NTDGI++G S+ V I NT IATGDDCI
Sbjct: 144 ITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKGVTITNTKIATGDDCI 203

Query: 164 SVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSD 223
           S+G  ++ +TI+ V CG GH ISIG LG+Y  EKE+ G+TVK C   GT NGVR+K+W +
Sbjct: 204 SIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKGCTFSGTMNGVRVKTWPN 263

Query: 224 SAVSYPTSNMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSST 283
           S     T ++ F+D+ M+NV NP+I+DQEYCP+ QC+R+ PS IK+S ++F N RGTS+ 
Sbjct: 264 SPPGAAT-DLTFQDLTMNNVQNPVILDQEYCPYGQCSRQAPSRIKLSNINFNNIRGTSTG 323

Query: 284 RL 286
           ++
Sbjct: 324 KV 324

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BLAST of CmoCh05G008530 vs. Swiss-Prot
Match: PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 3.7e-67
Identity = 115/228 (50.44%), Postives = 163/228 (71.49%), Query Frame = 1


Query: 55  DHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHI 114
           ++  + G G+FDGQG   +EKN C  ++   KLP+N++F+F+TN++++DITS DSK FHI
Sbjct: 116 ENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSKLFHI 175

Query: 115 NVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIATGDDCISVGYTNRKITI 174
           NV   KN+T + LKI APD SPNTDGI++G SE V I+ + I TGDDCIS+G   + + I
Sbjct: 176 NVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVI 235

Query: 175 SDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMH 234
            ++TCG GH ISIG LGK++ E+ + G+ +  C +  T+NG RIK+W         S +H
Sbjct: 236 KEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEH-GGAVSEIH 295

Query: 235 FEDIEMDNVANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSS 283
           FEDI M+NV++PI+IDQ+YCPWN+C +   S +K+S +SFKN RGTS+
Sbjct: 296 FEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSA 342

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BLAST of CmoCh05G008530 vs. TrEMBL
Match: E3VSV7_CUCPE (Polygalacturonase OS=Cucurbita pepo GN=PG1 PE=2 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 1.4e-137
Identity = 260/343 (75.80%), Postives = 268/343 (78.13%), Query Frame = 1


Query: 1   MALIPLLLLLVSNATADATSGVFDITTFGAKPNND------------------------- 60
           MALIPLLLLLVSNAT  ATSGVFDITTFGAKPN D                         
Sbjct: 18  MALIPLLLLLVSNATVGATSGVFDITTFGAKPNADATQALADAWKEACASATPSKVLVPK 77

Query: 61  ---------------EHYKLLLP----------EGDGLLVMEYFDHLTLSGTGVFDGQGK 120
                             +LL+           EGDGLLVMEY DHLTLSGTGVFDGQGK
Sbjct: 78  GTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEGDGLLVMEYIDHLTLSGTGVFDGQGK 137

Query: 121 ACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKIT 180
           A WEKNDCH+KKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVL GKNLTFDHLKIT
Sbjct: 138 AGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLAGKNLTFDHLKIT 197

Query: 181 APDNSPNTDGIYLGDSEDVYILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRL 240
           AP NSPNTDGI+LGDSEDVYILNT IATGDDCISVGYTNRKITISDVTCG GH ISIG L
Sbjct: 198 APHNSPNTDGIHLGDSEDVYILNTAIATGDDCISVGYTNRKITISDVTCGPGHGISIGSL 257

Query: 241 GKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID 294
           GKYKTEKE+VGVTVKKCKLIGTTNGVRIKSW DSAVSYP S+MHFEDIEM+NVANPIIID
Sbjct: 258 GKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSYPASDMHFEDIEMENVANPIIID 317

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BLAST of CmoCh05G008530 vs. TrEMBL
Match: A0A0A0K3B7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037910 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 8.9e-84
Identity = 153/253 (60.47%), Postives = 192/253 (75.89%), Query Frame = 1


Query: 43  PEGDGLLVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVK 102
           P GD  +   Y D + LSG GVFDGQGKA WEKNDCH + +C KLP++L+F+FITNSIV+
Sbjct: 102 PHGDSWITFAYVDRMRLSGGGVFDGQGKAGWEKNDCHKRIDCAKLPISLRFDFITNSIVR 161

Query: 103 DITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIATGDDC 162
            ITSLDSKNFH+N+L   NLTF  + I AP+NSPNTDGI++G S  + IL + IATGDDC
Sbjct: 162 RITSLDSKNFHVNILGCNNLTFQGVNIIAPENSPNTDGIHIGRSIGISILKSRIATGDDC 221

Query: 163 ISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWS 222
           IS+G  +++I +++V CG GH ISIG LGKY  E+ + GV V  C +I TTNGVRIK+W 
Sbjct: 222 ISLGDGSKRIKVNNVICGPGHGISIGSLGKYNNEEPVEGVIVNNCTIINTTNGVRIKTWP 281

Query: 223 DSAVSYPTSNMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSS 282
            S V+   +NMHF DI M NV+NPI+IDQEYCPWNQCNR++PS IKI+KVSFKN RG+S+
Sbjct: 282 ASPVAGIATNMHFSDITMVNVSNPILIDQEYCPWNQCNREIPSNIKINKVSFKNIRGSSA 341

Query: 283 TRLQSSLFAVKVI 296
           T +     AVK+I
Sbjct: 342 TPV-----AVKLI 349

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BLAST of CmoCh05G008530 vs. TrEMBL
Match: A0A0L9TZD8_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g206000 PE=3 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 6.0e-80
Identity = 141/240 (58.75%), Postives = 179/240 (74.58%), Query Frame = 1


Query: 45  GDGLLVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDI 104
           GD +L ++Y D LT+SG GVFDGQG   W++NDC  K  CK L MN  FNF+TNSIV+ I
Sbjct: 99  GDEMLRIDYADALTISGKGVFDGQGSYAWKQNDCSKKFSCKLLGMNFAFNFVTNSIVRGI 158

Query: 105 TSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIATGDDCIS 164
           TS DSK+FH+NVL  KN TFD  K+TAP+NS NTDGI++G S  V +LNT I TGDDC+S
Sbjct: 159 TSKDSKHFHVNVLGCKNFTFDGFKVTAPENSANTDGIHIGRSTGVNVLNTDIGTGDDCVS 218

Query: 165 VGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDS 224
           +G  ++++ + +V CG GH ISIG LGKYK E+ + G+T+K C + GT NGVRIK+W   
Sbjct: 219 LGDGSKQVLVQNVKCGPGHGISIGSLGKYKEEEPVDGITIKSCSIKGTQNGVRIKTWPSQ 278

Query: 225 AVSYPTSNMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTR 284
             +   +NM FEDI MDNV+NP+IIDQEYCPWNQC ++ PS IKISKV  KN +GTS+T+
Sbjct: 279 PGTITVTNMRFEDITMDNVSNPVIIDQEYCPWNQCTKQYPSKIKISKVIIKNIKGTSATK 338

[Close]

BLAST of CmoCh05G008530 vs. TrEMBL
Match: A0A0S3SN60_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G085700 PE=3 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 6.0e-80
Identity = 141/240 (58.75%), Postives = 179/240 (74.58%), Query Frame = 1


Query: 45  GDGLLVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDI 104
           GD +L ++Y D LT+SG GVFDGQG   W++NDC  K  CK L MN  FNF+TNSIV+ I
Sbjct: 99  GDEMLRIDYADALTISGKGVFDGQGSYAWKQNDCSKKFSCKLLGMNFAFNFVTNSIVRGI 158

Query: 105 TSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIATGDDCIS 164
           TS DSK+FH+NVL  KN TFD  K+TAP+NS NTDGI++G S  V +LNT I TGDDC+S
Sbjct: 159 TSKDSKHFHVNVLGCKNFTFDGFKVTAPENSANTDGIHIGRSTGVNVLNTDIGTGDDCVS 218

Query: 165 VGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDS 224
           +G  ++++ + +V CG GH ISIG LGKYK E+ + G+T+K C + GT NGVRIK+W   
Sbjct: 219 LGDGSKQVLVQNVKCGPGHGISIGSLGKYKEEEPVDGITIKSCSIKGTQNGVRIKTWPSQ 278

Query: 225 AVSYPTSNMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTR 284
             +   +NM FEDI MDNV+NP+IIDQEYCPWNQC ++ PS IKISKV  KN +GTS+T+
Sbjct: 279 PGTITVTNMRFEDITMDNVSNPVIIDQEYCPWNQCTKQYPSKIKISKVIIKNIKGTSATK 338

[Close]

BLAST of CmoCh05G008530 vs. TrEMBL
Match: A0A0B2QYF6_GLYSO (Polygalacturonase OS=Glycine soja GN=glysoja_049882 PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 7.8e-80
Identity = 142/235 (60.43%), Postives = 178/235 (75.74%), Query Frame = 1


Query: 50  VMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDS 109
           V++Y +  TLSG GVFDGQG   W++NDC   K+CK L MN  FNF+ NSIV+DITS DS
Sbjct: 105 VVQYVNSFTLSGKGVFDGQGATAWKQNDCTTNKDCKMLCMNFGFNFLNNSIVRDITSKDS 164

Query: 110 KNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIATGDDCISVGYTN 169
           KNFH+NVL   N TFD  K++AP +SPNTDGI++G S DV ILNT IATGDDC+S+G   
Sbjct: 165 KNFHVNVLGCNNFTFDGFKVSAPKDSPNTDGIHIGRSTDVKILNTNIATGDDCVSLGDGC 224

Query: 170 RKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYP 229
           + IT+ +V CG GH IS+G LGKY  E+ + G+ VK C L GT NGVRIK+W ++  +  
Sbjct: 225 KNITVQNVNCGPGHGISVGSLGKYDAEEPVAGLLVKNCTLNGTDNGVRIKTWPNTPGAIT 284

Query: 230 TSNMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTR 285
            ++MHFED+ M+NV NPIIIDQEYCPWNQC+++ PS IKISKVSFKN +GTS T+
Sbjct: 285 ITDMHFEDLTMNNVTNPIIIDQEYCPWNQCSKQNPSKIKISKVSFKNIKGTSGTK 339

[Close]

BLAST of CmoCh05G008530 vs. TAIR10
Match: AT3G07840.1 (AT3G07840.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 286.6 bits (732), Expect = 1.9e-77
Identity = 127/226 (56.19%), Postives = 174/226 (76.99%), Query Frame = 1


Query: 59  LSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLT 118
           L+G G+FDG+G A W  N+CH   ECKKLP++++F+F+ N+ ++DI+S+D+KNFHINVL 
Sbjct: 110 LNGGGIFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVENAEIRDISSIDAKNFHINVLG 169

Query: 119 GKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIATGDDCISVGYTNRKITISDVT 178
            KN+TFD++K+ AP  SPNTDGI+LG SE V ILN+ IATGDDCISVG   + + + +V 
Sbjct: 170 AKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKILNSKIATGDDCISVGDGMKNLHVENVM 229

Query: 179 CGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDI 238
           CG GH IS+G LG+Y  E+++ G+TV  C L GT NG+RIK+W  +A +   S +HFE+I
Sbjct: 230 CGPGHGISVGSLGRYVHEQDVTGITVVNCTLQGTDNGLRIKTWPSAACATTASGIHFENI 289

Query: 239 EMDNVANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTR 285
            ++NV+NPI+IDQEYCPWNQCN++ PS IK+  +SFKN RGTS  +
Sbjct: 290 ILNNVSNPILIDQEYCPWNQCNKQKPSTIKLVDISFKNIRGTSGNK 335

[Close]

BLAST of CmoCh05G008530 vs. TAIR10
Match: AT3G07820.1 (AT3G07820.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 279.3 bits (713), Expect = 3.0e-75
Identity = 127/236 (53.81%), Postives = 174/236 (73.73%), Query Frame = 1


Query: 49  LVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLD 108
           +V    D   L+G G FDG+G A W  N+CH   ECKKLP++++F+FI NS ++DI+S+D
Sbjct: 99  VVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISSID 158

Query: 109 SKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIATGDDCISVGYT 168
           +KNFHINVL  KN+T +++KI AP++SPNTDGI+LG S+ V ILN+ I+TGDDCISVG  
Sbjct: 159 AKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGDG 218

Query: 169 NRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSY 228
            + + +  VTCG GH IS+G LG+Y  E+++ G+ V  C L  T NG+RIK+W  +A S 
Sbjct: 219 MKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACST 278

Query: 229 PTSNMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTR 285
             S++HFEDI + +V+NPI+IDQEYCPWNQCN++  S IK+  +SFKN RGTS  +
Sbjct: 279 TASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNK 334

[Close]

BLAST of CmoCh05G008530 vs. TAIR10
Match: AT3G07830.1 (AT3G07830.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 275.8 bits (704), Expect = 3.3e-74
Identity = 123/236 (52.12%), Postives = 174/236 (73.73%), Query Frame = 1


Query: 49  LVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLD 108
           +V +  D   L+G G FDG+G A W  N+CH   ECKKLP++++F+F+TN+ ++DI+S+D
Sbjct: 100 VVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVTNAEIRDISSID 159

Query: 109 SKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIATGDDCISVGYT 168
           +KNFHINV+  KN+TFD++KI AP  SPNTDGI+LG S  V I+N+ I+TGDDC+SVG  
Sbjct: 160 AKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDDCVSVGDG 219

Query: 169 NRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSY 228
              + + +V CG GH IS+G LG+Y  E+++ G+ V  C L  T NG+RIK+W  +A S 
Sbjct: 220 MVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTWPSAACST 279

Query: 229 PTSNMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTR 285
             SN+HFE+I + NV+NPI+IDQEYCPWNQCN++  S+IK++ +SF+  RGTS  +
Sbjct: 280 TASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKLANISFRRIRGTSGNK 335

[Close]

BLAST of CmoCh05G008530 vs. TAIR10
Match: AT5G48140.1 (AT5G48140.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 269.2 bits (687), Expect = 3.1e-72
Identity = 118/226 (52.21%), Postives = 169/226 (74.78%), Query Frame = 1


Query: 59  LSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLT 118
           L+G GVFDG+G A W  N+CH    CKKLP++++F+F+T++ ++ ITSLD+K+FHINV+ 
Sbjct: 109 LNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGITSLDAKHFHINVIG 168

Query: 119 GKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIATGDDCISVGYTNRKITISDVT 178
            KN+TF+ +KI AP  SPNTDGI++G S+ + I+N+ I+TGDDC+SVG   + + +  VT
Sbjct: 169 AKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGDGMKNLLVERVT 228

Query: 179 CGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDI 238
           CG GH ISIG LG+Y  E+ + G+ +  C L  T NG+RIK+W  +A +   S++HFE+I
Sbjct: 229 CGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSAACTTTASDIHFENI 288

Query: 239 EMDNVANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSSTR 285
            + NV+NPI+IDQEYCPWNQCN++ PS IK++ +SFK  RGTS  +
Sbjct: 289 LLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNK 334

[Close]

BLAST of CmoCh05G008530 vs. TAIR10
Match: AT4G18180.1 (AT4G18180.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 246.1 bits (627), Expect = 2.8e-65
Identity = 116/239 (48.54%), Postives = 164/239 (68.62%), Query Frame = 1


Query: 45  GDGLLVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDI 104
           G G +   + + LTL+G G FDGQG   W  N+C     CK LP +LKF  +  ++V+ I
Sbjct: 111 GGGWIQFGWINGLTLTGGGTFDGQGALAWPFNNCTSDSNCKLLPTSLKFVGMNRTVVRRI 170

Query: 105 TSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIATGDDCIS 164
           +S++SK FHI ++  ++     L ITAP +SPNTDGI++  S +VY   + IATGDDC+S
Sbjct: 171 SSVNSKFFHIALVECRDFKGTRLNITAPSDSPNTDGIHIERSSNVYFSRSHIATGDDCVS 230

Query: 165 VGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDS 224
           +G  N +ITI+ + CG GH IS+G LG+Y  EK++ G+ VK CK+ GTTNG+RIK+W++S
Sbjct: 231 IGQGNSQITITSIKCGPGHGISVGSLGRYPNEKDVNGLVVKDCKISGTTNGIRIKTWANS 290

Query: 225 AVSYPTSNMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSST 284
                 +NM FE+I M+NV NPIIIDQ YCP++ C   VPS +++S++ FKN RGTSS+
Sbjct: 291 PGLSAATNMTFENIIMNNVTNPIIIDQSYCPFSSCISNVPSKVELSEIYFKNIRGTSSS 349

[Close]

BLAST of CmoCh05G008530 vs. NCBI nr
Match: gi|310753534|gb|ADP09681.1| (polygalacturonase [Cucurbita pepo])

HSP 1 Score: 497.3 bits (1279), Expect = 2.0e-137
Identity = 260/343 (75.80%), Postives = 268/343 (78.13%), Query Frame = 1


Query: 1   MALIPLLLLLVSNATADATSGVFDITTFGAKPNND------------------------- 60
           MALIPLLLLLVSNAT  ATSGVFDITTFGAKPN D                         
Sbjct: 18  MALIPLLLLLVSNATVGATSGVFDITTFGAKPNADATQALADAWKEACASATPSKVLVPK 77

Query: 61  ---------------EHYKLLLP----------EGDGLLVMEYFDHLTLSGTGVFDGQGK 120
                             +LL+           EGDGLLVMEY DHLTLSGTGVFDGQGK
Sbjct: 78  GTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEGDGLLVMEYIDHLTLSGTGVFDGQGK 137

Query: 121 ACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKIT 180
           A WEKNDCH+KKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVL GKNLTFDHLKIT
Sbjct: 138 AGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLAGKNLTFDHLKIT 197

Query: 181 APDNSPNTDGIYLGDSEDVYILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRL 240
           AP NSPNTDGI+LGDSEDVYILNT IATGDDCISVGYTNRKITISDVTCG GH ISIG L
Sbjct: 198 APHNSPNTDGIHLGDSEDVYILNTAIATGDDCISVGYTNRKITISDVTCGPGHGISIGSL 257

Query: 241 GKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIID 294
           GKYKTEKE+VGVTVKKCKLIGTTNGVRIKSW DSAVSYP S+MHFEDIEM+NVANPIIID
Sbjct: 258 GKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSYPASDMHFEDIEMENVANPIIID 317

[Close]

BLAST of CmoCh05G008530 vs. NCBI nr
Match: gi|659097567|ref|XP_008449696.1| (PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 411.4 bits (1056), Expect = 1.4e-111
Identity = 211/332 (63.55%), Postives = 243/332 (73.19%), Query Frame = 1


Query: 1   MALIPLLLLLVSNATADATSGVFDITTFGAK---------------------PNN----- 60
           +AL+P+LLLLVSN+ A + +GVFDIT +GAK                     P+      
Sbjct: 8   VALLPVLLLLVSNSKAQSAAGVFDITKYGAKPNADITAALASAWKEACASTTPSKVLIPK 67

Query: 61  --------------DEHYKLLLP---------EGDGLLVMEYFDHLTLSGTGVFDGQGKA 120
                             +L L          +GDGLL++EY D LT+SGTGV DGQGK 
Sbjct: 68  GTYGLTQSNLKGPCKSSIELQLEGTVQASVDVKGDGLLLLEYVDQLTVSGTGVVDGQGKT 127

Query: 121 CWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITA 180
            W KNDCH+KK C KLPMNLKFNF+TNSIVKDITSLDSKN+H N+L  KNLTFDH+ ITA
Sbjct: 128 AWGKNDCHLKKICTKLPMNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITA 187

Query: 181 PDNSPNTDGIYLGDSEDVYILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLG 240
           P NSPNTDGI++GDSE + ILNT IATGDDCISVG +N++I ISDVTCG GH ISIG LG
Sbjct: 188 PGNSPNTDGIHVGDSEQINILNTNIATGDDCISVGISNKQIVISDVTCGPGHGISIGSLG 247

Query: 241 KYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIIDQ 284
           KY  EKELVGVTVKKCKL GTTNGVRIK+W DSAV++P S+MHFEDIEM NV+NP++IDQ
Sbjct: 248 KYTNEKELVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQ 307

[Close]

BLAST of CmoCh05G008530 vs. NCBI nr
Match: gi|659097569|ref|XP_008449697.1| (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 405.6 bits (1041), Expect = 7.9e-110
Identity = 210/332 (63.25%), Postives = 242/332 (72.89%), Query Frame = 1


Query: 1   MALIPLLLLLVSNATADATSGVFDITTFGAK---------------------PNN----- 60
           +AL+P+LLL VSN+ A + +GVFDIT +GAK                     P+      
Sbjct: 8   VALLPMLLL-VSNSKAQSAAGVFDITKYGAKPNADITAALASAWKEACASTTPSKVLIPK 67

Query: 61  --------------DEHYKLLLP---------EGDGLLVMEYFDHLTLSGTGVFDGQGKA 120
                             +L L          +GDGLL++EY D LT+SGTGV DGQGK 
Sbjct: 68  GTYGLTQSNLKGPCKSSIELQLEGTVQASSDVKGDGLLLLEYVDQLTVSGTGVVDGQGKT 127

Query: 121 CWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKITA 180
            W KNDCH+KK C KLPMNLKFNF+TNSIVKDITSLDSKN+H N+L  KNLTFDH+ ITA
Sbjct: 128 AWGKNDCHLKKICTKLPMNLKFNFVTNSIVKDITSLDSKNYHFNLLACKNLTFDHVTITA 187

Query: 181 PDNSPNTDGIYLGDSEDVYILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGRLG 240
           P NSPNTDGI++GDSE + ILNT IATGDDCISVG +N++I ISDVTCG GH ISIG LG
Sbjct: 188 PGNSPNTDGIHVGDSEQINILNTNIATGDDCISVGSSNKQIVISDVTCGPGHGISIGSLG 247

Query: 241 KYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIIIDQ 284
           KY  EKELVGVTVKKCKL GTTNGVRIK+W DSAV++P S+MHFEDIEM NV+NP++IDQ
Sbjct: 248 KYTNEKELVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVSNPVLIDQ 307

[Close]

BLAST of CmoCh05G008530 vs. NCBI nr
Match: gi|778658546|ref|XP_011652893.1| (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 401.0 bits (1029), Expect = 2.0e-108
Identity = 212/346 (61.27%), Postives = 245/346 (70.81%), Query Frame = 1


Query: 1   MALIPLLLLLVSNATADATSG--VFDITTFGAK--------------------------- 60
           + L+PL LLLVSNA   + +G  VFD+T+FGAK                           
Sbjct: 8   VTLLPLFLLLVSNAKGQSAAGGGVFDVTSFGAKPNGDITGPLLVAWKDACASTTPSKVLI 67

Query: 61  PNND-------------EHYKLLL---------PEGDGLLVMEYFDHLTLSGTGVFDGQG 120
           P                   +L +         P+GDGLL++EY D LT+SGTGV DGQG
Sbjct: 68  PKGSYGLSQSNLKGPCKSPIELQIEGTLQASPDPKGDGLLLLEYIDQLTVSGTGVLDGQG 127

Query: 121 KACWEKNDCHMKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLTGKNLTFDHLKI 180
           KA WEKNDCH+KK C KLPM LK NFITNSIVKDITSLDSKN+HIN+L  KNLTFDH+ I
Sbjct: 128 KAGWEKNDCHLKKICTKLPMTLKLNFITNSIVKDITSLDSKNYHINLLGCKNLTFDHVTI 187

Query: 181 TAPDNSPNTDGIYLGDSEDVYILNTVIATGDDCISVGYTNRKITISDVTCGQGHDISIGR 240
           TAP+NSPNTDGI++  SE + ILNT IATGDDCISVG TN++I ISDVTCG GH ISIG 
Sbjct: 188 TAPENSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQIVISDVTCGPGHGISIGS 247

Query: 241 LGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWSDSAVSYPTSNMHFEDIEMDNVANPIII 296
           LGKY  EKE+VGVTVKKCKL  TTNGVRIK+W DS  ++P ++MHFEDIEMDNV+NPIII
Sbjct: 248 LGKYTKEKEVVGVTVKKCKLTSTTNGVRIKTWPDSVGTFPATDMHFEDIEMDNVSNPIII 307

[Close]

BLAST of CmoCh05G008530 vs. NCBI nr
Match: gi|659134134|ref|XP_008467043.1| (PREDICTED: exopolygalacturonase-like, partial [Cucumis melo])

HSP 1 Score: 399.8 bits (1026), Expect = 4.4e-108
Identity = 191/253 (75.49%), Postives = 217/253 (85.77%), Query Frame = 1


Query: 43  PEGDGLLVMEYFDHLTLSGTGVFDGQGKACWEKNDCHMKKECKKLPMNLKFNFITNSIVK 102
           P+GDGLL++EY D LT+SGTGV DGQGKA WEKNDCH+KKEC KLPMNLK NF+TNSIVK
Sbjct: 60  PKGDGLLLLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVK 119

Query: 103 DITSLDSKNFHINVLTGKNLTFDHLKITAPDNSPNTDGIYLGDSEDVYILNTVIATGDDC 162
           DITSLDSKN+HIN+L  KNLTFDH+ ITAP NSPNTDGI++  SE + ILNT IATGDDC
Sbjct: 120 DITSLDSKNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDC 179

Query: 163 ISVGYTNRKITISDVTCGQGHDISIGRLGKYKTEKELVGVTVKKCKLIGTTNGVRIKSWS 222
           ISVG TN+++ ISDVTCG GH ISIG LGKY  EKE+VGVTVKKCKL  TTNGVRIK+W 
Sbjct: 180 ISVGDTNKQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWP 239

Query: 223 DSAVSYPTSNMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNFRGTSS 282
           DSAV++P S+MHFEDIEM NV+NP+IIDQEYCPWNQCNRKVPS IKIS VSFKN RGTS+
Sbjct: 240 DSAVAFPASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSA 299

Query: 283 TRLQSSLFAVKVI 296
           T +     AVK++
Sbjct: 300 TPV-----AVKIV 307

The following BLAST results are available for this feature:

BLAST of CmoCh05G008530 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PGLR_BRANA	1.4e-77	54.39	Polygalacturonase OS=Brassica napus PE=2 SV=1	[more]
PGLR_OENOR	4.1e-74	54.13	Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1	[more]
PGLR_MEDSA	1.2e-73	57.02	Polygalacturonase OS=Medicago sativa PE=2 SV=1	[more]
PGLR2_PLAAC	1.5e-71	52.07	Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1	[more]
PGLR_GOSBA	3.7e-67	50.44	Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1	[more]

BLAST of CmoCh05G008530 vs. TrEMBL


Match Name	E-value	Identity	Description
E3VSV7_CUCPE	1.4e-137	75.80	Polygalacturonase OS=Cucurbita pepo GN=PG1 PE=2 SV=1	[more]
A0A0A0K3B7_CUCSA	8.9e-84	60.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037910 PE=3 SV=1	[more]
A0A0L9TZD8_PHAAN	6.0e-80	58.75	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g206000 PE=3 SV=1	[more]
A0A0S3SN60_PHAAN	6.0e-80	58.75	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G085700 PE=...	[more]
A0A0B2QYF6_GLYSO	7.8e-80	60.43	Polygalacturonase OS=Glycine soja GN=glysoja_049882 PE=3 SV=1	[more]

BLAST of CmoCh05G008530 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07840.1	1.9e-77	56.19	Pectin lyase-like superfamily protein	[more]
AT3G07820.1	3.0e-75	53.81	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	3.3e-74	52.12	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	3.1e-72	52.21	Pectin lyase-like superfamily protein	[more]
AT4G18180.1	2.8e-65	48.54	Pectin lyase-like superfamily protein	[more]

BLAST of CmoCh05G008530 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|310753534\|gb\|ADP09681.1\|	2.0e-137	75.80	polygalacturonase [Cucurbita pepo]	[more]
gi\|659097567\|ref\|XP_008449696.1\|	1.4e-111	63.55	PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like [Cucumis melo]	[more]
gi\|659097569\|ref\|XP_008449697.1\|	7.9e-110	63.25	PREDICTED: exopolygalacturonase-like [Cucumis melo]	[more]
gi\|778658546\|ref\|XP_011652893.1\|	2.0e-108	61.27	PREDICTED: exopolygalacturonase-like [Cucumis sativus]	[more]
gi\|659134134\|ref\|XP_008467043.1\|	4.4e-108	75.49	PREDICTED: exopolygalacturonase-like, partial [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000743	Glyco_hydro_28
IPR006626	PbH1
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0004650	polygalacturonase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004650	polygalacturonase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G008530.1	CmoCh05G008530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 48..286 score: 2.8
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 146..167 score: 860.0coord: 230..251 score: 4900.0coord: 199..220 score: 110.0coord: 119..145 score: 2
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 11..291 score: 2.09
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 33..288 score: 1.4
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 49..289 score: 8.2E
None	No IPR available	PANTHER	PTHR31375:SF37	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 49..289 score: 8.2E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh05G008530	Cucumber (Gy14) v2	cgybcmoB240
CmoCh05G008530	Melon (DHL92) v3.6.1	cmomedB823
CmoCh05G008530	Cucumber (Chinese Long) v3	cmocucB0920
CmoCh05G008530	Watermelon (97103) v2	cmowmbB780
CmoCh05G008530	Watermelon (97103) v2	cmowmbB784
CmoCh05G008530	Wax gourd	cmowgoB0930
CmoCh05G008530	Cucurbita moschata (Rifu)	cmocmoB372
CmoCh05G008530	Cucumber (Gy14) v1	cgycmoB0554
CmoCh05G008530	Cucurbita maxima (Rimu)	cmacmoB485
CmoCh05G008530	Cucurbita maxima (Rimu)	cmacmoB789
CmoCh05G008530	Wild cucumber (PI 183967)	cmocpiB784
CmoCh05G008530	Cucumber (Chinese Long) v2	cmocuB779
CmoCh05G008530	Melon (DHL92) v3.5.1	cmomeB726
CmoCh05G008530	Watermelon (Charleston Gray)	cmowcgB696
CmoCh05G008530	Watermelon (Charleston Gray)	cmowcgB697
CmoCh05G008530	Watermelon (97103) v1	cmowmB762
CmoCh05G008530	Watermelon (97103) v1	cmowmB765
CmoCh05G008530	Cucurbita pepo (Zucchini)	cmocpeB725
CmoCh05G008530	Bottle gourd (USVL1VR-Ls)	cmolsiB703