CmoCh05G008300 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh05G008300
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionATP synthase subunit alpha, chloroplastic (3.6.3.14)
LocationCmo_Chr05 : 5060593 .. 5065528 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATTTTCATGGTTAATGTTAGGTTCTTAGGATTGCTCAACAACGAACACCCAAGAAGACCGCCCGGCCGTTAAGCTTATTCGGGAGATGTTTTTTATTTGCATTCACGCCTTTTGGAAAGAGGCACTAAATCAAGTTCTGCTTTAGGTGAAGGAAGTATGACTGCTTTACCAATAGTTGAGACTCAGTCGGGAGATGTTTCAGCTTATATTCCTACTAATGTAATTTCCATTACCGATGGACAAATATTCTTATTTGCGGATCTATTCAATGTTGGAATCAAACCTGCTATTAATGTGGGTATTTCCGTCTCCAAAGTAGGATCTGCAGCTCAAATTAAAGCCATGAAACAAATAGCCAACAAATCAAAATTGGAATTGGCTCAATTTGTCGAATTAGAAGCCTTTGCGCAATTCGCTTATGATCTCGATAAAGCTACTCAGAATCAATTGGCAAGAGGTCAACGATTACATGAGTTGCTCAAACAATCTCAATCATCCCCTCTCATGGTAGAAGAACAGATAATGACTATTTATACCGGAACGAATGATTATCTTGATTCATTAGAAATTGAACAAGTAAGAAAATTTCTCGTTGAGTTACGTACTTACGTAAAAACGAATGATCAAGATGAATACAAAGAACAGGAGCGAGAAAATACAATAAAGAATATTCGCTAAAGGTTTTATTATTGATGACTTCAGGTACGTAGAATAAGATAGAATACGAACGAAGAAAAGTACAGTTTGAGAGCACCGTTAATATATATGGTTTCAATTTACTAAATATAGCTTCCAAAGATTTAAACCTACTCGATATAATCAAATAAATATATCTCTATCAAATCTTTACCAAATATCTATCATATCTTTACTAAATTTGTTTCAAATATATCTAGGCATCAGACTCCATATCCCAACAATCTCACACTTTGAGACTGATCAACCCCAACAATCTCCCAATTAGAGACTGGTCCAGTCAACCCCAACAATCTCCACTAATCCAGTCAACCAAGAATTTCATTCTAAATAGGTACCATACCACTTGAGGCTTTGCACAACCTCAATGTTCCAACGTCAACACAAAATGTTTGCTGGATCTCTTGCCCCCTCTATCTTCTCCAAACACATCACCATCTTCCACAAACCTCTGAGTGAAATGTTATCGCCTTATGTGTTTTGAATTTCAATGATAAACCAGGTTCCTCGCCAACTGCATGACACTTTAACTATCTATCTGAAGAATCTTTTCACGCTGCTTCTTGCCTAATTCTTCTAGATAGTCCGTCATCCATATCATCTCCTTTCCATCTTCAGCTATTGCCACGTACTCAGCCTCAACAGATGAAAGAGCAACACATTTCTGAAGCCTAAACATTCCATCATCCATGGCTTGCTCCCACTTAGTTGTATCCTCCAACTGTAGGTCCTCATCAAGGGGCTTTCGTTCCACTTCATCAGTCACCAACCAATAGTGTAAAGAAGACTCTGAATGATACTCAAGAATTAGGCAAGAACATCACTAGGTGAATCTTTCAGCAACTCAACCTCAACCTCAACTCCAACTTGCTTCACCTCTGGTTTCTCAACAAGAGTCTCATAAGTTTTTTGAGTATCTGCTACAACATCACTATGTGAATCTTTCAGCAACTCAACCTCAACTCCCACTTGCTTCACCTCTGGTTTCTCAGCAACAGTCTTAGGAGTTTCTTGAGTATCCACTACAACATCATTATGTGAATTGTTCTGCAACTCAACCTCAACTCCCACTTGCTTCGTTGTCCCGGTATCTTTCTTCAATTCTCTGGTAGTCTTTGTGAAGCTAACTCGCTTTTGTTTGCTCATAACGCAGTTCTCATAAGAACTCATATCAACAGATTTCAGACCTTCTAAAACTCCTCCCGCAGCCAACATCTTCATTCCTTTAACGCTCATATGTCCAAGTCTATTGTGCCATATACTTGAATTTGAAGCACTCTCAGCAACAACAACTCTGTTCATACACCCTCCAGCAGTGTATAAAGTTCTAGATTTTGTGCCACGTGCTACCACCATAGCACCCTTCACAATCTTCCACGAAATCTTACCAAACTTTGTTGCATAACCTGTGCTATCCAACTAACCAATAGAGATCAGGTTTTTCTTGAGACTAGAAATATATCTGACATCTTTTAATGTCTACTGATTTCCTACTGGAGTTTTTTATGCAGACATCCCATTTTCCTTCAATTTTCAAATCTTTGTTGTCGACAAGATACACTTTCTCGAAATTTCCAGACTTAAAATTTTGACATAGCTCTTTATTTGGAGACGAATGAAAAGATGCACTTGAATCCAAAATCCAGGATTCAATCGGACTGTCCACACTAAGGATTAGAGCATCCCCAATGTCTTCTGCTGAATTTACCGAATCATCATCATCCTCTGATTTGTGATACTGCTTCCTCTTTGATCGTTTACCATCTATTTGAAAGTGACCTTTTCCTCCACAACTCCAACACTTCACATTTGGTTTGTTTGGAGATTTTCCTCAGTTTCTTGATTTTGATCGCCCATTGTTTGGGTCCTTTGATTTACTCCTTCCCCTTCGAACAACACTGAGAGCATTGCCTAAATCTCTGATTTCTTGTTTGCGAATACTTTCGCTAAGAACTACATCTCGAATTTCATCGAACTTCAGCTTATTAGATCCTCGTGAACTGCTGATCGCGGCAACAACAGTATCTCACGACTCAGGTAAAGATGACATCAAAATCAATGCCTTAATTTCATTTTCGAAATTAATATCTACCGAACTTAGTTGACTTACAATCACATTGAATTCATTTATATGACCAGCAACAGATCCACCTTTAGACATTTGTAAATTAAATAGTCTCTGCATTAAATACACCTTGTTCATAGCCGACGGTTTCTCGTACATATTCAACAACGCCTTCAACAGATCTGACGTTGTCTTCTCCTTGATGATGTTGAACGTCACTTTTCTAGACAGCTTCAATCAGATCAACCCTAAGGTCTGACGATCCTTGAGCTTTCACTGCTCCATGGTCATACTATCCGGCTTCACCCCCAACAGGGGTTCTTGAAGACCTTTCTCCATCTTCACAGACCAGGGTGAGAATTTCGCCTCCCTCTGATACCAATTGTTAGCTCTAATCCCAAGGTTTACACAAATACCAGGAGAGAGAAAATACAATGAGGAATATTTGTTAAAGGTTTTATTATTGATGACTTAGGGATGATAACAAAAAAAAAAGAGTATATATATAGTTTCAATTTACTAAAGATAGCTTTCCAAAGATTTAAACTAATATAATCTAACAAATATCTCTCTATCCAATCTCTACCAAATATCTACCATATATATCTTTCAGATTTTTACGAAATATCAAATGTGTCGATCTAGGCATCAGGCTCCATATCCCAACAGTTAAAACATACATTATAGGTAAAATTGGATTCATACGATCGTTCGAAAAAGAAAGAAGAAACTGAGACAAGACTAAAGCAAAACGAGCCCAATATTACATAGGCCCTGTCGTGCCATTACCTTAGGTATTTTTCTACTTAATATTTTCTTGAAGATAACTTTTTTTTAGTTCAATTTAAGTGATTGAAAAGTGTTGAAATCGTTATTCTAGTTTCTACACTATGAAATCTTCAAAATTATTAAAACTAATCGAAAATCGAACTTAAAAATGTTTTAAAAAATGGCTCAAAATAGTGTCAGGTCACAAACTTAGTTTAGTTATGTCGTCGAGAGCTGGTTCACTTTAACCGCAGATATCATCCTTCTTTATCTTCTAGACAATAGGGCACAAGCATGGTCTTCTCCTTCGATGGTCTGGTTTTGAGCTTTTGTGGTCGAGTTGGTTTCTTCATTGAACTTCTAAATCTCCTTATTACGAACATTTGATAAAAAAAAAATTTATATATTTTCATCTAGAATCGAAGAGGAATTTAGGACATTAGTATCCTTATTTTCAGGCTAAATCAAATATACCTCAACTTGAATTCATGTCCTTTCTTGAGACGTACTCAACCTTCGATTCCTTCACGAACATCGATCTCATTACTTCCACGAAACTATAGGAAAAGGATTTATTCAAAGCTATAAGGTATATGAAGAGAAAATGACTTCCAAAGAATTTGATTCAAAACTTAATTTCTTAAAGAAATACTTAAATGCAATTCATATTTAGATACGATAAGATCTCACATCAATCAATTAGAGAGACGAACGAAATATTTTTTATAAGGGTGCGAAAACCTATCACTAACAAACGCATTTTAAAAACCTTGAAGAAAAGTTAAAAAGAATACAATATCAGCTAACCATTACCGATACATAAAAGAAATTTGAACTTAAAAATAACCACAAACAAGTTTTATTTTTGGGAATGATGATCAATAATACTTCTACTAAATTAGAGTATCCAAGTGTTGATGGATGTTACCATATGATACCATAAAGGCAAGACTTTTAATATCCAAATTCTTGAGTTGGTGCATGCAAGAACTAACAGCTACAAATATGAGTTTTGGTTGTTCCTTCTCACAAAGAATCAATCCAAAGATCCATTTCTGATACCCAATCATCCCAAAGCTCCCTCTTGTTGCACCCATCTCCATCTGCCATTGCTACCACTTCTTGATCAAATTGGTAGTCCATTTGGATATTCTCCATGCGGATGCTACCACTTTGTTCAATAATTGGTACGTTTTGGTTCTGATTTTGTATCAATATTCCTTGCTTCTCTCCATTTTGATCCTCAACATATTCTTTTTCTTTTGATTTGCTGCTTTCTTCTTGAATAGGCTTCCACTTTGTGGAATTTGGCTTCTGATCACCTCCTTGATGACCATTCACCTTCTTGCTCAAATGGCAATTCCAATAGTTCTTGATGTCGTTTGCTGTTCTTCCCGGTAA

mRNA sequence

ATGAAAATTTTCATGGATTGCTCAACAACGAACACCCAAGAAGACCGCCCGGCCGTTAAGCTTATTCGGGAGATAGGCACTAAATCAAGTTCTGCTTTAGGTGAAGGAAGTATGACTGCTTTACCAATAGTTGAGACTCAGTCGGGAGATGTTTCAGCTTATATTCCTACTAATGTAATTTCCATTACCGATGGACAAATATTCTTATTTGCGGATCTATTCAATGTTGGAATCAAACCTGCTATTAATGTGGGTATTTCCGTCTCCAAAGTAGGATCTGCAGCTCAAATTAAAGCCATGAAACAAATAGCCAACAAATCAAAATTGGAATTGGCTCAATTTGTCGAATTAGAAGCCTTTGCGCAATTCGCTTATGATCTCGATAAAGCTACTCAGAATCAATTGGCAAGAGGTCAACGATTACATGAGTTGCTCAAACAATCTCAATCATCCCCTCTCATGGCTAAATCAAATATACCTCAACTTGAATTCATGTCCTTTCTTGAGACGCTTCCACTTTGTGGAATTTGGCTTCTGATCACCTCCTTGATGACCATTCACCTTCTTGCTCAAATGGCAATTCCAATAGTTCTTGATGTCGTTTGCTGTTCTTCCCGGTAA

Coding sequence (CDS)

ATGAAAATTTTCATGGATTGCTCAACAACGAACACCCAAGAAGACCGCCCGGCCGTTAAGCTTATTCGGGAGATAGGCACTAAATCAAGTTCTGCTTTAGGTGAAGGAAGTATGACTGCTTTACCAATAGTTGAGACTCAGTCGGGAGATGTTTCAGCTTATATTCCTACTAATGTAATTTCCATTACCGATGGACAAATATTCTTATTTGCGGATCTATTCAATGTTGGAATCAAACCTGCTATTAATGTGGGTATTTCCGTCTCCAAAGTAGGATCTGCAGCTCAAATTAAAGCCATGAAACAAATAGCCAACAAATCAAAATTGGAATTGGCTCAATTTGTCGAATTAGAAGCCTTTGCGCAATTCGCTTATGATCTCGATAAAGCTACTCAGAATCAATTGGCAAGAGGTCAACGATTACATGAGTTGCTCAAACAATCTCAATCATCCCCTCTCATGGCTAAATCAAATATACCTCAACTTGAATTCATGTCCTTTCTTGAGACGCTTCCACTTTGTGGAATTTGGCTTCTGATCACCTCCTTGATGACCATTCACCTTCTTGCTCAAATGGCAATTCCAATAGTTCTTGATGTCGTTTGCTGTTCTTCCCGGTAA
Homology
[Close]
BLAST of CmoCh05G008300 vs. Swiss-Prot
Match: ATPA_LIRTU (ATP synthase subunit alpha, chloroplastic OS=Liriodendron tulipifera GN=atpA PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.4e-54
Identity = 117/136 (86.03%), Postives = 122/136 (89.71%), Query Frame = 1 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSS LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQ+A KSKLELAQF ELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL  +  I
Sbjct: 420 LLKQSQSTPLTVEDQI 435

[Close]
BLAST of CmoCh05G008300 vs. Swiss-Prot
Match: ATPA_BUXMI (ATP synthase subunit alpha, chloroplastic OS=Buxus microphylla GN=atpA PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.4e-54
Identity = 117/136 (86.03%), Postives = 122/136 (89.71%), Query Frame = 1 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSS LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQ+A KSKLELAQF ELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL  +  I
Sbjct: 420 LLKQSQSAPLTVEEQI 435

[Close]
BLAST of CmoCh05G008300 vs. Swiss-Prot
Match: ATPA_DIOEL (ATP synthase subunit alpha, chloroplastic OS=Dioscorea elephantipes GN=atpA PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.1e-54
Identity = 117/136 (86.03%), Postives = 121/136 (88.97%), Query Frame = 1 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSS LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQ+A KSKLELAQF ELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS PL  +  I
Sbjct: 420 LLKQSQSDPLAVEEQI 435

[Close]
BLAST of CmoCh05G008300 vs. Swiss-Prot
Match: ATPA_GOSHI (ATP synthase subunit alpha, chloroplastic OS=Gossypium hirsutum GN=atpA PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.0e-54
Identity = 117/136 (86.03%), Postives = 121/136 (88.97%), Query Frame = 1 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSS LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQ+A KSKLELAQF ELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL     I
Sbjct: 420 LLKQSQSAPLTVAEQI 435

[Close]
BLAST of CmoCh05G008300 vs. Swiss-Prot
Match: ATPA_GOSBA (ATP synthase subunit alpha, chloroplastic OS=Gossypium barbadense GN=atpA PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.0e-54
Identity = 117/136 (86.03%), Postives = 121/136 (88.97%), Query Frame = 1 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSS LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQ+A KSKLELAQF ELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQVAGKSKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL     I
Sbjct: 420 LLKQSQSAPLTVAEQI 435

[Close]
BLAST of CmoCh05G008300 vs. TrEMBL
Match: A0A0S2IEU2_9ROSI (ATP synthase subunit alpha OS=Cucurbita digitata GN=atpA PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.8e-53
Identity = 120/136 (88.24%), Postives = 124/136 (91.18%), Query Frame = 1 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQIA KSKLELAQFVELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQIAGKSKLELAQFVELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL  +  I
Sbjct: 420 LLKQSQSAPLTVEEQI 435

[Close]
BLAST of CmoCh05G008300 vs. TrEMBL
Match: A0A0S2IHQ9_9ROSI (ATP synthase subunit alpha OS=Cucurbita pedatifolia GN=atpA PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.8e-53
Identity = 120/136 (88.24%), Postives = 124/136 (91.18%), Query Frame = 1 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQIA KSKLELAQFVELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQIAGKSKLELAQFVELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL  +  I
Sbjct: 420 LLKQSQSAPLTVEEQI 435

[Close]
BLAST of CmoCh05G008300 vs. TrEMBL
Match: A0A0S2IF17_9ROSI (ATP synthase subunit alpha OS=Cucurbita andreana GN=atpA PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.8e-53
Identity = 120/136 (88.24%), Postives = 124/136 (91.18%), Query Frame = 1 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQIA KSKLELAQFVELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQIAGKSKLELAQFVELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL  +  I
Sbjct: 420 LLKQSQSAPLTVEEQI 435

[Close]
BLAST of CmoCh05G008300 vs. TrEMBL
Match: A0A0S2IF15_9ROSI (ATP synthase subunit alpha OS=Cucurbita foetidissima GN=atpA PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.8e-53
Identity = 120/136 (88.24%), Postives = 124/136 (91.18%), Query Frame = 1 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQIA KSKLELAQFVELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQIAGKSKLELAQFVELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL  +  I
Sbjct: 420 LLKQSQSAPLTVEEQI 435

[Close]
BLAST of CmoCh05G008300 vs. TrEMBL
Match: A0A0S2IEV4_9ROSI (ATP synthase subunit alpha OS=Cucurbita ficifolia GN=atpA PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.8e-53
Identity = 120/136 (88.24%), Postives = 124/136 (91.18%), Query Frame = 1 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQIA KSKLELAQFVELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQIAGKSKLELAQFVELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL  +  I
Sbjct: 420 LLKQSQSAPLTVEEQI 435

[Close]
BLAST of CmoCh05G008300 vs. TAIR10
Match: ATCG00120.1 (ATCG00120.1 ATP synthase subunit alpha)

HSP 1 Score: 206.5 bits (524), Expect = 1.6e-53
Identity = 113/136 (83.09%), Postives = 120/136 (88.24%), Query Frame = 1 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   K SS LGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKLSSQLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQ+A K KLELAQF ELEAF+QF+ DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFSQFSSDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL  +  I
Sbjct: 420 LLKQSQSAPLTVEEQI 435

[Close]
BLAST of CmoCh05G008300 vs. TAIR10
Match: AT2G07698.1 (AT2G07698.1 ATPase, F1 complex, alpha subunit protein)

HSP 1 Score: 157.1 bits (396), Expect = 1.1e-38
Identity = 88/136 (64.71%), Postives = 103/136 (75.74%), Query Frame = 1 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   K S   G GS+TALP++ETQ+GDVSAYIPTNVISITDGQI L  +LF  GI+PAIN
Sbjct: 580 ERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAIN 639

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VG+SVS+VGSAAQ+KAMKQ+   SKLELAQ+ E+ AFAQF  DLD ATQ  L RG RL E
Sbjct: 640 VGLSVSRVGSAAQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTE 699

Query: 144 LLKQSQSSPLMAKSNI 160
           + KQ Q +PL  +  I
Sbjct: 700 VPKQPQYAPLPIEKQI 715

[Close]
BLAST of CmoCh05G008300 vs. TAIR10
Match: ATMG01190.1 (ATMG01190.1 ATP synthase subunit 1)

HSP 1 Score: 157.1 bits (396), Expect = 1.1e-38
Identity = 88/136 (64.71%), Postives = 103/136 (75.74%), Query Frame = 1 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   K S   G GS+TALP++ETQ+GDVSAYIPTNVISITDGQI L  +LF  GI+PAIN
Sbjct: 310 ERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAIN 369

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VG+SVS+VGSAAQ+KAMKQ+   SKLELAQ+ E+ AFAQF  DLD ATQ  L RG RL E
Sbjct: 370 VGLSVSRVGSAAQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTE 429

Query: 144 LLKQSQSSPLMAKSNI 160
           + KQ Q +PL  +  I
Sbjct: 430 VPKQPQYAPLPIEKQI 445

[Close]
BLAST of CmoCh05G008300 vs. NCBI nr
Match: gi|952954756|gb|ALO22114.1| (AtpA (plastid) [Cucurbita ficifolia])

HSP 1 Score: 217.2 bits (552), Expect = 2.6e-53
Identity = 120/136 (88.24%), Postives = 124/136 (91.18%), Query Frame = 1 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQIA KSKLELAQFVELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQIAGKSKLELAQFVELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL  +  I
Sbjct: 420 LLKQSQSAPLTVEEQI 435

[Close]
BLAST of CmoCh05G008300 vs. NCBI nr
Match: gi|952954937|gb|ALO22292.1| (AtpA (plastid) [Cucurbita andreana])

HSP 1 Score: 217.2 bits (552), Expect = 2.6e-53
Identity = 120/136 (88.24%), Postives = 124/136 (91.18%), Query Frame = 1 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQIA KSKLELAQFVELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQIAGKSKLELAQFVELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL  +  I
Sbjct: 420 LLKQSQSAPLTVEEQI 435

[Close]
BLAST of CmoCh05G008300 vs. NCBI nr
Match: gi|952954543|gb|ALO21904.1| (AtpA (plastid) [Cucurbita cordata])

HSP 1 Score: 217.2 bits (552), Expect = 2.6e-53
Identity = 120/136 (88.24%), Postives = 124/136 (91.18%), Query Frame = 1 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQIA KSKLELAQFVELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQIAGKSKLELAQFVELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL  +  I
Sbjct: 420 LLKQSQSAPLTVEEQI 435

[Close]
BLAST of CmoCh05G008300 vs. NCBI nr
Match: gi|952954674|gb|ALO22033.1| (AtpA (plastid) [Cucurbita ecuadorensis])

HSP 1 Score: 217.2 bits (552), Expect = 2.6e-53
Identity = 120/136 (88.24%), Postives = 124/136 (91.18%), Query Frame = 1 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQIA KSKLELAQFVELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQIAGKSKLELAQFVELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL  +  I
Sbjct: 420 LLKQSQSAPLTVEEQI 435

[Close]
BLAST of CmoCh05G008300 vs. NCBI nr
Match: gi|952954897|gb|ALO22253.1| (AtpA (plastid) [Cucurbita lundelliana])

HSP 1 Score: 216.5 bits (550), Expect = 4.5e-53
Identity = 120/136 (88.24%), Postives = 123/136 (90.44%), Query Frame = 1 

Query: 24  EIGTKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLFADLFNVGIKPAIN 83
           E   KSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFL ADLFN GI+PAIN
Sbjct: 300 ERAAKSSSALGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAIN 359

Query: 84  VGISVSKVGSAAQIKAMKQIANKSKLELAQFVELEAFAQFAYDLDKATQNQLARGQRLHE 143
           VGISVS+VGSAAQIKAMKQIA KSKLELAQFVELEAFAQFA DLDKATQNQLARGQRL E
Sbjct: 360 VGISVSRVGSAAQIKAMKQIAGKSKLELAQFVELEAFAQFASDLDKATQNQLARGQRLRE 419

Query: 144 LLKQSQSSPLMAKSNI 160
           LLKQSQS+PL     I
Sbjct: 420 LLKQSQSAPLTVDEQI 435

The following BLAST results are available for this feature:
BLAST of CmoCh05G008300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATPA_LIRTU2.4e-5486.03ATP synthase subunit alpha, chloroplastic OS=Liriodendron tulipifera GN=atpA PE=... [more]
ATPA_BUXMI2.4e-5486.03ATP synthase subunit alpha, chloroplastic OS=Buxus microphylla GN=atpA PE=3 SV=1[more]
ATPA_DIOEL3.1e-5486.03ATP synthase subunit alpha, chloroplastic OS=Dioscorea elephantipes GN=atpA PE=3... [more]
ATPA_GOSHI4.0e-5486.03ATP synthase subunit alpha, chloroplastic OS=Gossypium hirsutum GN=atpA PE=3 SV=... [more]
ATPA_GOSBA4.0e-5486.03ATP synthase subunit alpha, chloroplastic OS=Gossypium barbadense GN=atpA PE=3 S... [more]
BLAST of CmoCh05G008300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0S2IEU2_9ROSI1.8e-5388.24ATP synthase subunit alpha OS=Cucurbita digitata GN=atpA PE=3 SV=1[more]
A0A0S2IHQ9_9ROSI1.8e-5388.24ATP synthase subunit alpha OS=Cucurbita pedatifolia GN=atpA PE=3 SV=1[more]
A0A0S2IF17_9ROSI1.8e-5388.24ATP synthase subunit alpha OS=Cucurbita andreana GN=atpA PE=3 SV=1[more]
A0A0S2IF15_9ROSI1.8e-5388.24ATP synthase subunit alpha OS=Cucurbita foetidissima GN=atpA PE=3 SV=1[more]
A0A0S2IEV4_9ROSI1.8e-5388.24ATP synthase subunit alpha OS=Cucurbita ficifolia GN=atpA PE=3 SV=1[more]
BLAST of CmoCh05G008300 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00120.11.6e-5383.09ATCG00120.1 ATP synthase subunit alpha[more]
AT2G07698.11.1e-3864.71 ATPase, F1 complex, alpha subunit protein[more]
ATMG01190.11.1e-3864.71ATMG01190.1 ATP synthase subunit 1[more]
BLAST of CmoCh05G008300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|952954756|gb|ALO22114.1|2.6e-5388.24AtpA (plastid) [Cucurbita ficifolia][more]
gi|952954937|gb|ALO22292.1|2.6e-5388.24AtpA (plastid) [Cucurbita andreana][more]
gi|952954543|gb|ALO21904.1|2.6e-5388.24AtpA (plastid) [Cucurbita cordata][more]
gi|952954674|gb|ALO22033.1|2.6e-5388.24AtpA (plastid) [Cucurbita ecuadorensis][more]
gi|952954897|gb|ALO22253.1|4.5e-5388.24AtpA (plastid) [Cucurbita lundelliana][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000194ATPase_F1/V1/A1_a/bsu_nucl-bd
IPR000793ATP_synth_asu_C
IPR020003ATPase_a/bsu_AS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016820hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
Vocabulary: Cellular Component
TermDefinition
GO:0033178proton-transporting two-sector ATPase complex, catalytic domain
Vocabulary: Biological Process
TermDefinition
GO:0015991ATP hydrolysis coupled proton transport
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0006119 oxidative phosphorylation
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005886 plasma membrane
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain
molecular_function GO:0005524 ATP binding
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
molecular_function GO:0016820 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G008300.1CmoCh05G008300.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainPFAMPF00006ATP-synt_abcoord: 34..89
score: 2.0
IPR000793ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminalPFAMPF00306ATP-synt_ab_Ccoord: 96..161
score: 2.3
IPR000793ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminalunknownSSF47917C-terminal domain of alpha and beta subunits of F1 ATP synthasecoord: 97..163
score: 1.07
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active sitePROSITEPS00152ATPASE_ALPHA_BETAcoord: 80..89
scor
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 28..96
score: 1.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 22..95
score: 1.06
NoneNo IPR availableGENE3DG3DSA:1.20.150.20coord: 97..159
score: 3.2
NoneNo IPR availablePANTHERPTHR15184ATP SYNTHASEcoord: 24..159
score: 2.7
NoneNo IPR availablePANTHERPTHR15184:SF42ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTICcoord: 24..159
score: 2.7

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh05G008300Wax gourdcmowgoB0926
CmoCh05G008300Cucurbita moschata (Rifu)cmocmoB149
CmoCh05G008300Cucumber (Gy14) v1cgycmoB0510
CmoCh05G008300Cucumber (Gy14) v1cgycmoB0768
CmoCh05G008300Cucurbita maxima (Rimu)cmacmoB191
CmoCh05G008300Cucurbita maxima (Rimu)cmacmoB786
CmoCh05G008300Wild cucumber (PI 183967)cmocpiB784
CmoCh05G008300Wild cucumber (PI 183967)cmocpiB790
CmoCh05G008300Cucumber (Chinese Long) v2cmocuB779
CmoCh05G008300Cucumber (Chinese Long) v2cmocuB787
CmoCh05G008300Melon (DHL92) v3.5.1cmomeB725
CmoCh05G008300Melon (DHL92) v3.5.1cmomeB726
CmoCh05G008300Watermelon (Charleston Gray)cmowcgB692
CmoCh05G008300Watermelon (Charleston Gray)cmowcgB696
CmoCh05G008300Watermelon (97103) v1cmowmB760
CmoCh05G008300Cucurbita pepo (Zucchini)cmocpeB743
CmoCh05G008300Bottle gourd (USVL1VR-Ls)cmolsiB703
CmoCh05G008300Cucumber (Gy14) v2cgybcmoB240
CmoCh05G008300Cucumber (Gy14) v2cgybcmoB246
CmoCh05G008300Melon (DHL92) v3.6.1cmomedB822
CmoCh05G008300Melon (DHL92) v3.6.1cmomedB823
CmoCh05G008300Silver-seed gourdcarcmoB0538
CmoCh05G008300Silver-seed gourdcarcmoB0653
CmoCh05G008300Cucumber (Chinese Long) v3cmocucB0920
CmoCh05G008300Cucumber (Chinese Long) v3cmocucB0926
CmoCh05G008300Watermelon (97103) v2cmowmbB784