CmoCh05G006850 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh05G006850
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCoiled-coil domain-containing protein 93
LocationCmo_Chr05 : 3489853 .. 3496767 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGACTTATCGGAGTTCCATTTTCAGGCGACATTGACCTTTGCCATTCGATCAGTTTCGACGGCGTTCGGAAACCCGTGATTTCTTCATCCGAGAAGCTGGCTTCCGGCATTCCCTGCTGCATCAAACCGTAACAGGTGTGCATTATCAATTCGATGTTATCCCTCTCCTTTTATACCATTTCCATGCTGAAAGTGAGGGACGGAACTTTCTGATGAACTTCTCGAATCATAAATTAATTGTTAGCGTCGATTTTAGAGAATTGAATGAGCTTTAATTTGATTGGAGAATGACTTGTATATCGTTGTGATTCATGTACGATTAATTACAGTGTCTTCTGTAGAGGTCGTATTTTCCTTCGTCCGGTTGCTTTCCATCCGCATCAGTGGTCCGTGTAATGTCTGAGGCGATCAAGAGCCAGGTACTTAGTCTTTGTATTGTATCAGTTGTGATGGTTAGGTTCGGTAAATATCAATTCTGTGTTAGGAACTTTGGGCTTGGACTTGCGGCGTGTTTTTGCTGGTAGTATTGAGAGTTCTTAAAATAGTCTTGATGTTTTTCAGTATGTTGTCTAATTTCATACTGCTGTGGCGCTCACTTACTGGAAATCACAGGGTACTTGCAGTGAGCGCTTGATTGAGGAAAACAAATGTTTACAATCCCTTCAGGTGGATTCCGACAATGGAGTTTCAATGGATATACTAAAGGAGGACGTGGATGAACTGGTCGGAGTTTTTAAAAATCATTTCCTTTTCCTTTTTTTCTTCCTTTTCAAGTGTATAATAGGATCTATCATGGCTTTTGTTTGAAGTCCTGAGTTCTCAAGATCACTAAAAAGCGTATATTAGAATATAATTTATCAAGCATAATTATCAGTTTTCTCTTAAGAAATTTTTTCCCTTGATGAATTTCTTTCTCGTTATTTCCGGTATTTAGAACCAGAAGAAAGTTGCAGTGGTGAAGGACTTGCAATTTTTACAAGATAGAGTCAGTAAGGCGAATGCTAATCATGTGGTGCAGAATTTGATGTCATGCTTGAAGACTTTGGAGGTCTGCACCTTTGCTCTGCACTTACAGTCTTATTTTTTCGCTGAATAGTTTCGTCCCTCTGCATTTCGTTTGTAGTTCTTGTGATTTTCTGTAGTGTCCTTTACAATTTTATTCTAAACCGGTTTTCTGTTCCTCCTAAGGAGGCTGAAGATTTTATATTTTCTCTGATTTAGTTGAAGAGTGCTAGTCACTGAAGGGACATCTCTTGGGAAAAGTTTCTTGAACATTTTCAGGGTTCTTTGAAGTATCTTTCTCTATTTAAATCAACTAAACTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTCTTTCTGTTTAATAACCTTCTGGATAGAACTTTTTTTTTGTTCCTCTCTCTCTCTGTTGACAGCTATCATATTGTTTCTAATACCATGCATTCTCACATGCAAGATGTATTTTACCAATTTCTTTTCTTGTGCTTTATCAGATTTGTGTTTTAAAGCTTTTGTTTCCAAACATCTTCCATACTTGAATTGGAACAGCATTCAGTATAGGTTTTTTTTCTCATCCATATCTTTTTATTTGTATATGCCATCTATGATCACAATTTACCTCTGTGGCTCATCTACTATAAGAATTTAAAAAAATTGTGATGGAGGCGTGGGCTCCAACTTATGTCAGAAATTGATACTACAAGGGGTTTGGCTTGAAAGTGTAGTCATTTTGAAGAGTTCCTTTTCATTTTTATTCTACATTGTAATGTTAAATTGCATAATTACTTAAACACACACACACACACGCATACACAACTAACCCGCATTCTTTGAGTTTGAAAACTATCAACCATTTTTTATTCAACTTATCCTTGTAATATATTTATGTACAACTTATCATTTTGTGTTTCTAGTTATATTTATATGCAACTTATAATTTTGTGTTTCAAATGCACCTTGGTTTGTTTCAGGATCTTGGAAAGCAGGAATCTGAACTCCTATCTCCATGTGATGCACAGCGTATTAAATTGCAAGCTGAGATTTTCGAGCTGGAGGGAAGATTAACTGGAGACCACGAAGGCTCAAATTTCTTGGATAGCTTAGATAATTTTATCAGTGAATCTGAGGAGGAATTGAATTCTGTAAAGAAGGTAAATTTTTTCTCCCCAAAGCAGTTTTTTACTGTGTTCTCCTTTTTATGCATGAATAATTCAAAATCAAGGCTTGAAGCCATTTCATGTCATGATTGATTTTGTCTATCACTCCAAATTCCATCACTGAATCCTTATCCTTTTTGCATTAGATCTAGTCAATTCATTGATCTATTTATCTTGACTGTAAGTACTCTGTATTTTATCTTTAAGTATTCTGTATTTTATCTTTATTATAGGCACTTGCTTCAAGATTAAGGGAAACACTTGCATTAAAGAGGCTTCTTGATGATGTGCCAACCCAAACTGAACTCATCCAGTTTGTTGTTCTCTTATTCTCCTTCTGTTTTTCCTTCCTAAAAATTGTTTTGTTTGTTCTTCATTTTTTCTAGATGATTATGATATTATCTTCAATTTTTCTTGGTGATAATTGCATTATCTTACCTCTTCTCAGCGATGATTGCATTGTTGTCACTTTTTCTTGGTCGTAGTTTGAATTCCTTAGTTGATCTTGGACACTTATCCAGTTTTCTGAGCTGCTGCGGCTGATATCTTGCTTAAAAGTTTAGGACCTAATGAAGTTTTTGTGTGCTTTTTAAAACACTAGAACTTCATTTTGAGAAGTGAAACTTAATCTTTAGGTCAGTAACAATTCTCAGTCTCTAACTCGGTACCTTCTTGATGACGAAATCTAAATAGCCTCATCGAGGTCTCATTATCTGATCTATTTCTGGCTGTTGATTAGTCTTGGATTACGACCATGCAGAAGCAACATGTAAAACTCCTATTTCTGGGAATGGCTGGAAACTAAGGAGCATTTAGTTGATATATATTCAATTAAGTGCCCCATTTCATTCTTGCTTTGATTATTATTGTTTATGCTCTTAATTGCATGCAGAGATGAATGCAGCTTCTTACCGAAGTAGTGGTGGCATGTCTATGTCATTCTTCTTCATCTTCTTCTTTGTACATGTACATTCACACACGAGTTTTTGTTTTAGCTTTACCTGCATTCTATTTATTCTATGTGAGACCATTCTTGATTTTACAATATTTGGTTTCAAAAGACTTGTATGTTTAATATTGTTGGTAGGTGAGAACCATGATTTGAATCCATGACGTTAAAGACATGAGTTTACATCATGTCTATTCAACCATTGGACTAATGGCCACTCCATCACATGCCTGTGTATGGAGCTACGATTTTTTTTCTCTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCCATTTTTCCCATCACAAATTGACTGTGTTGTGTTAAAGATAGTGTCCAGTTCATTGCACGTGGTACACAATTTTAGACGTGGACACATTCCACTCATTTCTTTATTCCTCAACTCTGACTTCTGAATTTCTAAATTTCTGTGCTATCAACTCGAAGAATTCTGAACTTCTTTTTTCTTCTCAAATGTTCACATGGGCACTTTGAAATACTTCTAAATGCTTTACATTAGCTGGAAAGCCATCCTCTTCTGATTTAATCTCAGTTTGCAGGTACGAGCGCCGATTTTCAGAGCTATACATTAACATCCAGGTTCGATTATTTTTTTTCCATGAACCACTTATTTGTCTTGATTCATATTATTTGTCAAACTTCTTCAGATGATATTTTACTCTTGAGCTAAAGATGTTCCATCAAGCAGGATAAACATAGGCAAACACGCAGATACTATGCAACCTACAATGCACTCTTGGAGATAAAGGATCTGATGTTGAAGGAGACATCCTTGTTGAATTCCATAAGTTCACAGGTTAATGATCATTAAAAGGATACACTTTTGTCATTTGTTTCAGTATCTATACGTTAAGGAACTATTTTCCATGACTGCTAATATGATGATGACTCCTTTATCAAGGTGTATGAATTTTCGTTTGTAATGGGTGCACTAGGAATAATTCATCTTTCTTCTGCATGTTAAATTTTGTACCTTTTATCTGCCAATTTATTGCTTGTCTTTGGATTTTTTATTTCTAGTTCGATTATTTGGGACATTTAGTCCAGCCTCCTCCTTTCGTCCTTTTGGTAATCTGGTCAAGACTATTGTCATCATCTTCTGTGATGATTTTTTATTTATTTATTTATTTATAATTTTTATTTATTTTTATGTTTGGGGCTAGTGATGGCGGTCGTTTCAACAAGAAAAAAGGCGGCGTCTATATACACACTATTTATCTTCATAAAGAATTTCTCTTAAAGCAAGTACAGTTTTGTTGTATGCTGTGATATTTTCTGTTCCCCATTTGAAGGATAGATTGTACGAATCCTTATGCTGTAATAGTTTTTTTTTTAAAGATATTAAATAAATTGTAGTCAACAGTTGCAAGGATTGCCAATAGATATGTGAAACGCATGATTAAAAATATTTTTTAGTGGACTTATCTAGTATCGACCTCCCATGCAATGATATGTTATCGTGTCCCACCTTAATCTAGTGTTGGTGGGATGTGATGTTGGTCCTAGAATGTACTAGTCATTTGACACTCCCATTTCTGATAGCAGCTGTGGTTGTTACTGCTTTTCAGGCTAATGTGTCACTTTATACTCAATTGCGGCCCTGTGAGGTTGTGTTACTATAAGTTAGACGTGATTGCTGTGCACATATTTGAGACATCATAAACTTATATCCAGAAAGATTAATCAATCTTGTTAGGCGATCAACTCCAACGTGCTGTGTTCATCAATAATTTTGTTGCCATTCGTTGACAAGTTTGGTGGCTGTTTAAGAAACTCTGTTACTGATGTTCCCTTCAACTTTTGTAGTTTCAAGATGCCATAGCCAACTCCATGAGTCAAATGAAACTTATCGAATCCATGGAGGGAATTCTGAAAGGCATTCAACAGGTACTTTTTGTTTCCATTGTTGAGCTTATGACATACAAGAGTGGACCAACTCTAATGAAGATTTATAATTGGTGAAAGTAATAACTTCTAAATTAGATATTGTCATTGAAGTAACCAATATAAAAGAGCCACAAAGATCAAACCTAGCAAAAAATTTCCATACTAAAATTTAAATTTTATTTAAGCTCAAGTTTCAATTTTATGAAATTAAAATTTTGAGTTTAAAATTGATAACTGAGCTAAGTATAGAGGAATAAATAATTTTCCCTTTCTTATACTATTGGACCTTCTTGAGTTGTAGTCTTTTATTAGTATTATTATTTATCCCAGTTTAATAGATATTGATATATGCAGAAACTAGATAAGGTGCTTCTTTCTCATCAAGAAGAGCAGCAGGTCTGCAATGCCTTGAAAGAGAAATATGCTGCAGCAACTGCAGAGCAAAGACGTTGCTATGCACTCTTAAAAGCTTTCCAGGTGAGCACTATAGCGTTGTGATTTGTGATTGATATTATACTTTTTGTGCCAACTAAACCTAGCTCAACTGATTTGTGACAACATCAGAGAGTGAGAGATTAGAGGTTCAAATCTCTCTCTCTGATGTTGTGGTAACCACGTTCTTAAAGGTGGTCTCGTCCTTGCTTATTTTCTTTATTTTCCAGGAGGAATGTGCAAAGAACGAGAAACTTCGGACCCAAAATTCAACGTGAACAGATTTTAACCATTACCAATGCTTGTGTTGTGTAAGCCTTCATTCAATTTGGTCTTTGTTAGAGAGAGCTTTTGTGCAGAGTTCATTAGAGGCCTTCAAAATAGTGATGATCAACTTAAAACGTGTTTCCCTGCCCCGTTCCAACTTCAAAGCCGGTATGTGAAAATATTAGCCCTCCTTAATGATTTCTGATATGTAATTACCCAACTTTCCCAGGGATAGGGCATTTGTATGAAAATCTAACATTTAAAGAGATAGAGCCGTTCGGATAGGAACAAACACATATCGATGCGTGTGTTTTTTTAAAAAATATTGCGGAGTAATTGAAGATCCTGTTGGGAACGGACCAATTTGAGGCTTCT

mRNA sequence

TGACTTATCGGAGTTCCATTTTCAGGCGACATTGACCTTTGCCATTCGATCAGTTTCGACGGCGTTCGGAAACCCGTGATTTCTTCATCCGAGAAGCTGGCTTCCGGCATTCCCTGCTGCATCAAACCGTAACAGTGTCTTCTGTAGAGGTCGTATTTTCCTTCGTCCGGTTGCTTTCCATCCGCATCAGTGGTCCGTGTAATGTCTGAGGCGATCAAGAGCCAGGTGGATTCCGACAATGGAGTTTCAATGGATATACTAAAGGAGGACGTGGATGAACTGGTCGGAAACCAGAAGAAAGTTGCAGTGGTGAAGGACTTGCAATTTTTACAAGATAGAGTCAGTAAGGCGAATGCTAATCATGTGGTGCAGAATTTGATGTCATGCTTGAAGACTTTGGAGGATCTTGGAAAGCAGGAATCTGAACTCCTATCTCCATGTGATGCACAGCGTATTAAATTGCAAGCTGAGATTTTCGAGCTGGAGGGAAGATTAACTGGAGACCACGAAGGCTCAAATTTCTTGGATAGCTTAGATAATTTTATCAGTGAATCTGAGGAGGAATTGAATTCTGTAAAGAAGGCACTTGCTTCAAGATTAAGGGAAACACTTGCATTAAAGAGGCTTCTTGATGATGTGCCAACCCAAACTGAACTCATCCAGTACGAGCGCCGATTTTCAGAGCTATACATTAACATCCAGGATAAACATAGGCAAACACGCAGATACTATGCAACCTACAATGCACTCTTGGAGATAAAGGATCTGATGTTGAAGGAGACATCCTTGTTGAATTCCATAAGTTCACAGTTTCAAGATGCCATAGCCAACTCCATGAGTCAAATGAAACTTATCGAATCCATGGAGGGAATTCTGAAAGGCATTCAACAGAAACTAGATAAGGTGCTTCTTTCTCATCAAGAAGAGCAGCAGGTCTGCAATGCCTTGAAAGAGAAATATGCTGCAGCAACTGCAGAGCAAAGACGTTGCTATGCACTCTTAAAAGCTTTCCAGGAGGAATGTGCAAAGAACGAGAAACTTCGGACCCAAAATTCAACGTGAACAGATTTTAACCATTACCAATGCTTGTGTTGTGTAAGCCTTCATTCAATTTGGTCTTTGTTAGAGAGAGCTTTTGTGCAGAGTTCATTAGAGGCCTTCAAAATAGTGATGATCAACTTAAAACGTGTTTCCCTGCCCCGTTCCAACTTCAAAGCCGGTATGTGAAAATATTAGCCCTCCTTAATGATTTCTGATATGTAATTACCCAACTTTCCCAGGGATAGGGCATTTGTATGAAAATCTAACATTTAAAGAGATAGAGCCGTTCGGATAGGAACAAACACATATCGATGCGTGTGTTTTTTTAAAAAATATTGCGGAGTAATTGAAGATCCTGTTGGGAACGGACCAATTTGAGGCTTCT

Coding sequence (CDS)

ATGTCTGAGGCGATCAAGAGCCAGGTGGATTCCGACAATGGAGTTTCAATGGATATACTAAAGGAGGACGTGGATGAACTGGTCGGAAACCAGAAGAAAGTTGCAGTGGTGAAGGACTTGCAATTTTTACAAGATAGAGTCAGTAAGGCGAATGCTAATCATGTGGTGCAGAATTTGATGTCATGCTTGAAGACTTTGGAGGATCTTGGAAAGCAGGAATCTGAACTCCTATCTCCATGTGATGCACAGCGTATTAAATTGCAAGCTGAGATTTTCGAGCTGGAGGGAAGATTAACTGGAGACCACGAAGGCTCAAATTTCTTGGATAGCTTAGATAATTTTATCAGTGAATCTGAGGAGGAATTGAATTCTGTAAAGAAGGCACTTGCTTCAAGATTAAGGGAAACACTTGCATTAAAGAGGCTTCTTGATGATGTGCCAACCCAAACTGAACTCATCCAGTACGAGCGCCGATTTTCAGAGCTATACATTAACATCCAGGATAAACATAGGCAAACACGCAGATACTATGCAACCTACAATGCACTCTTGGAGATAAAGGATCTGATGTTGAAGGAGACATCCTTGTTGAATTCCATAAGTTCACAGTTTCAAGATGCCATAGCCAACTCCATGAGTCAAATGAAACTTATCGAATCCATGGAGGGAATTCTGAAAGGCATTCAACAGAAACTAGATAAGGTGCTTCTTTCTCATCAAGAAGAGCAGCAGGTCTGCAATGCCTTGAAAGAGAAATATGCTGCAGCAACTGCAGAGCAAAGACGTTGCTATGCACTCTTAAAAGCTTTCCAGGAGGAATGTGCAAAGAACGAGAAACTTCGGACCCAAAATTCAACGTGA
Homology
[Close]
BLAST of CmoCh05G006850 vs. Swiss-Prot
Match: CCD93_CHICK (Coiled-coil domain-containing protein 93 OS=Gallus gallus GN=CCDC93 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.9e-28
Identity = 86/245 (35.10%), Postives = 139/245 (56.73%), Query Frame = 1 

Query: 38  KDLQFLQDRVSKANANHVVQNLMSCLKTLEDLGKQESELLSPCDAQRIKLQAEIFEL--E 97
           K+L  L+   S+A+++ V+QNL   +   E+L  QE E  + C  +  +LQ +I  L  E
Sbjct: 367 KELAALETIESQADSS-VLQNLRMLVAINENLKSQEQEFKAHCREEMERLQQDIENLKAE 426

Query: 98  GRLTGDHEGSNFLDSLDNFISESEEELNSVKKALASRLRETLALKRLLDDVPTQTELIQY 157
               G+ E  N L  +D      +E+L  ++  LA R RE   L+R +D+VP++ EL QY
Sbjct: 427 AAENGEEEEPNKL--IDQQYQTEKEKLQKIRLLLARRNREIAILQRKIDEVPSRAELTQY 486

Query: 158 ERRFSELYINIQDKHRQTRRYYATYNALLEIKDLMLKETSLLNSISSQFQDAIANSMSQM 217
           ++RF ELY  +   H++T++++  YN L + K  + KE +LLNSI   F  A+A+S S+ 
Sbjct: 487 QKRFIELYSQVSATHKETKQFFTLYNTLDDKKVYLEKEVNLLNSIHDNFHQAMASSGSRE 546

Query: 218 KLIESMEGILKGIQQKLDKVLLSHQEEQQVCNALKEKYAAATAEQRRCYALLKAFQEECA 277
           + +  ME I++GI+Q   K+    QE +   + L ++Y     +QR  +  +K F+EEC 
Sbjct: 547 QFLRQMEQIVEGIKQNRMKMEKKKQENKMRRDQLNDEYLELLEKQRLYFKTVKEFKEECR 606

Query: 278 KNEKL 281
           KNE L
Sbjct: 607 KNEML 608

[Close]
BLAST of CmoCh05G006850 vs. Swiss-Prot
Match: CCD93_XENTR (Coiled-coil domain-containing protein 93 OS=Xenopus tropicalis GN=ccdc93 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 7.6e-27
Identity = 82/260 (31.54%), Postives = 141/260 (54.23%), Query Frame = 1 

Query: 21  KEDVDELVGNQKKVAVVKDLQFLQDRVSKANANHVVQNLMSCLKTLEDLGKQESELLSPC 80
           ++ + E+  + +K+   ++L  L++  SKA+ + V+Q L   +   E L  QE +  S C
Sbjct: 345 RKQLTEVTSHMEKLD--QELSVLENMESKADPS-VLQKLRDLVAQNESLKAQEQQFRSKC 404

Query: 81  DAQRIKLQAEIFELEGRLTGDHEGSNFLDSLDNFISESEEELNSVKKALASRLRETLALK 140
             +  +LQ  I  L+   T   E      + +       E+L  ++  LA R RE   L+
Sbjct: 405 REEMSRLQQNIDGLKAAATEHGEEKEQTQAFEQQYKAEREKLQKIRLLLARRNREIAILQ 464

Query: 141 RLLDDVPTQTELIQYERRFSELYINIQDKHRQTRRYYATYNALLEIKDLMLKETSLLNSI 200
           R +D+VP++ EL QY++RF ELY  +   H++T++++  YN L + K  + KE +LLNSI
Sbjct: 465 RKIDEVPSRAELTQYQKRFIELYGQVSATHKETKQFFTLYNTLDDKKVYLEKEVNLLNSI 524

Query: 201 SSQFQDAIANSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCNALKEKYAAATAEQ 260
              FQ A+A+  ++ + +  ME I+ GI+Q  +K+    QE +   + L ++Y     +Q
Sbjct: 525 HDNFQQAMASPSARDQFLRQMEQIVDGIRQSRNKMEKKKQENKMKRDQLNDEYLELLEKQ 584

Query: 261 RRCYALLKAFQEECAKNEKL 281
           R  +  +K F+EEC KNE L
Sbjct: 585 RLYFKTVKEFKEECRKNETL 601

[Close]
BLAST of CmoCh05G006850 vs. Swiss-Prot
Match: CCD93_XENLA (Coiled-coil domain-containing protein 93 OS=Xenopus laevis GN=ccdc93 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.9e-25
Identity = 81/263 (30.80%), Postives = 140/263 (53.23%), Query Frame = 1 

Query: 21  KEDVDELVGNQKKVAVVKDLQFLQDRVSKANANHVVQNLMSCLKTLEDLGKQESELLSPC 80
           K+ + E+  + + +   ++L  L+   SKA+ + V+Q L   +   E L  QE +  S C
Sbjct: 344 KKQLTEVTSHMENLE--QELLVLEKVESKADPS-VLQKLRDLVAQNESLKLQEQQFRSKC 403

Query: 81  DAQRIKLQAEIFELEGRLTGDHEGSNFLDSLDNFISESEEELNSVKKALASRLRETLALK 140
             +  +LQ  I  L+   T   E      + +      +E+L  ++  LA R RE   L 
Sbjct: 404 REEMSRLQQNIDSLKAAATEHGEEKEQSQAFEQQYKAEKEKLQKIRLLLARRNREIAILH 463

Query: 141 RLLDDVPTQTELIQYERRFSELYINIQDKHRQTRRYYATYNALLEIKDLMLKETSLLNSI 200
           R +D+VP++ EL QY++RF ELY  +   H++T++++  YN L + K  + KE +LLNS+
Sbjct: 464 RKIDEVPSRAELTQYQKRFIELYGQVSATHKETKQFFTLYNTLDDKKVYLEKEVNLLNSV 523

Query: 201 SSQFQDAIANSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCNALKEKYAAATAEQ 260
              FQ A+A+   + + +  ME I+ GI+Q  +K+    QE +   + L ++Y     +Q
Sbjct: 524 HDNFQQAMASPSVRDQFLRQMEQIVDGIRQSRNKMEKKKQENKMKRDQLNDEYLELLEKQ 583

Query: 261 RRCYALLKAFQEECAKNEKLRTQ 284
           R  +  +K F+EEC +NE L T+
Sbjct: 584 RLYFKTVKEFREECRRNETLLTK 603

[Close]
BLAST of CmoCh05G006850 vs. Swiss-Prot
Match: CCD93_HUMAN (Coiled-coil domain-containing protein 93 OS=Homo sapiens GN=CCDC93 PE=1 SV=2)

HSP 1 Score: 110.5 bits (275), Expect = 3.0e-23
Identity = 83/258 (32.17%), Postives = 137/258 (53.10%), Query Frame = 1 

Query: 38  KDLQFLQDRVSKANANHVVQNLMSCLKTLEDLGKQESELLSPCDAQRIKLQAEIFELEGR 97
           K+   L+   SKA+ + ++QNL + +   E+L  QE E  + C  +  +LQ EI  L+  
Sbjct: 366 KEQAALEKIESKADPS-ILQNLRALVAMNENLKSQEQEFKAHCREEMTRLQQEIENLKAE 425

Query: 98  L----------TGDHEGS-----NFLDSLDNFISESEEELNSVKKALASRLRETLALKRL 157
                      +G+  G+        + LD   +  +E+L  ++   A R RE   L R 
Sbjct: 426 RAPRGDEKTLSSGEPPGTLTSAMTHDEDLDRRYNMEKEKLYKIRLLQARRNREIAILHRK 485

Query: 158 LDDVPTQTELIQYERRFSELYINIQDKHRQTRRYYATYNALLEIKDLMLKETSLLNSISS 217
           +D+VP++ ELIQY++RF ELY  I   H++T++++  YN L + K  + KE SLLNSI  
Sbjct: 486 IDEVPSRAELIQYQKRFIELYRQISAVHKETKQFFTLYNTLDDKKVYLEKEISLLNSIHE 545

Query: 218 QFQDAIANSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCNALKEKYAAATAEQRR 277
            F  A+A+  ++ + +  ME I++GI+Q   K+    QE +   + L ++Y     +QR 
Sbjct: 546 NFSQAMASPAARDQFLRQMEQIVEGIKQSRMKMEKKKQENKMRRDQLNDQYLELLEKQRL 605

Query: 278 CYALLKAFQEECAKNEKL 281
            +  +K F+EE  KNE L
Sbjct: 606 YFKTVKEFKEEGRKNEML 622

[Close]
BLAST of CmoCh05G006850 vs. Swiss-Prot
Match: CCD93_MOUSE (Coiled-coil domain-containing protein 93 OS=Mus musculus GN=Ccdc93 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 8.7e-23
Identity = 86/273 (31.50%), Postives = 145/273 (53.11%), Query Frame = 1 

Query: 21  KEDVDELVGNQKKVAVVKDLQFLQDRVSKANANHVVQNLMSCLKTLEDLGKQESELLSPC 80
           K+ + EL  + +K+   K+   L+   +KA+ + ++QNL + +   E L  QE E  + C
Sbjct: 351 KKTLTELKDHGEKLD--KEQAALEKLEAKADPS-MLQNLRALVAMNESLKSQEQEFKAHC 410

Query: 81  DAQRIKLQAEIFELEGRLT--------GDHEGS-----NFLDSLDNFISESEEELNSVKK 140
             +  +LQ EI  L+            G+ +G+        + LD   +  +E+L  ++ 
Sbjct: 411 REEMARLQQEIETLKAERAPGEKIISGGEPQGALTSTMTHNEDLDRRYNMEKEKLYKIRL 470

Query: 141 ALASRLRETLALKRLLDDVPTQTELIQYERRFSELYINIQDKHRQTRRYYATYNALLEIK 200
             A R RE   L R +D+VP++ ELIQY++RF ELY  I   H++T++++  YN L + K
Sbjct: 471 LQARRNREIAILHRKIDEVPSRAELIQYQKRFIELYRQISAVHKETKQFFTLYNTLDDKK 530

Query: 201 DLMLKETSLLNSISSQFQDAIANSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCN 260
             + KE SLLNSI   F  A+A+  ++ + +  ME I++GI+Q   K+    QE +   +
Sbjct: 531 VYLEKEISLLNSIHENFSQAMASPAARDQFLRQMEQIVEGIKQSRMKMEKKKQENKMRRD 590

Query: 261 ALKEKYAAATAEQRRCYALLKAFQEECAKNEKL 281
            L ++Y     +QR  +  +K F+EE  KNE L
Sbjct: 591 QLNDQYLELLEKQRLYFKTVKEFKEEGRKNELL 620

[Close]
BLAST of CmoCh05G006850 vs. TrEMBL
Match: A0A0A0LQ22_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379330 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 9.8e-90
Identity = 185/217 (85.25%), Postives = 197/217 (90.78%), Query Frame = 1 

Query: 68  DLGKQESELLSPCDAQRIKLQAEIFELEGRLTGDHEGSNFLDSLDNFISESEEELNSVKK 127
           DLGKQESE +S C+++R +LQ EI EL GRLT DHE  NF DSLD+ IS SEEEL+SVKK
Sbjct: 43  DLGKQESEFMSTCNSKRSELQDEIIELGGRLTEDHECLNFFDSLDDLISASEEELDSVKK 102

Query: 128 ALASRLRETLALKRLLDDVPTQTELIQYERRFSELYINIQDKHRQTRRYYATYNALLEIK 187
           ALA  +RETLALKRLLDDVPTQTELIQYERRFSELY NIQDK RQTRRYYATYNALLEIK
Sbjct: 103 ALALSVRETLALKRLLDDVPTQTELIQYERRFSELYTNIQDKLRQTRRYYATYNALLEIK 162

Query: 188 DLMLKETSLLNSISSQFQDAIANSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCN 247
           DLMLKETSLLNSISSQFQDAIA+S S+MKLI+SM GILKGIQQKL+KV LSHQEEQQVCN
Sbjct: 163 DLMLKETSLLNSISSQFQDAIASSASKMKLIDSMVGILKGIQQKLNKVHLSHQEEQQVCN 222

Query: 248 ALKEKYAAATAEQRRCYALLKAFQEECAKNEKLRTQN 285
           ALKEKYAAATAEQRRCY LLKAFQEECAKNEKLRTQN
Sbjct: 223 ALKEKYAAATAEQRRCYTLLKAFQEECAKNEKLRTQN 259

[Close]
BLAST of CmoCh05G006850 vs. TrEMBL
Match: D7SUP2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g04930 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.9e-72
Identity = 154/267 (57.68%), Postives = 206/267 (77.15%), Query Frame = 1 

Query: 19  ILKEDVDELVGNQKKVAVVKDLQFLQDRVSKANANHVVQNLMSCLKTLEDLGKQESELLS 78
           +L  ++DE   N++KV V+ ++Q LQ+R+SK  AN  VQ L+S LK L+   +QES++ S
Sbjct: 39  LLNANLDEQ--NERKVEVLNEMQELQERISKEGANSSVQRLLSLLKLLKSQERQESDIQS 98

Query: 79  PCDAQRIKLQAEIFELEGRLTGDHEGSNFLDSLDNFISESEEELNSVKKALASRLRETLA 138
             +A+  KL+AE+ +LE ++   +   +  +  D F+    EELN+ K+ LA RLR  L 
Sbjct: 99  CHEAKHSKLKAEVVDLEEKVASGNGSESISNGFDKFLHNCLEELNAAKRELAGRLRAILL 158

Query: 139 LKRLLDDVPTQTELIQYERRFSELYINIQDKHRQTRRYYATYNALLEIKDLMLKETSLLN 198
           LKR LDDVP+QTELIQYERRFSELY++IQ+K +QTR++YATYNAL+EIK+LMLKETSLLN
Sbjct: 159 LKRQLDDVPSQTELIQYERRFSELYVHIQEKLQQTRKFYATYNALVEIKELMLKETSLLN 218

Query: 199 SISSQFQDAIANSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCNALKEKYAAATA 258
           SI+SQFQDAI ++  ++KLI SMEGI+KG QQKL+KV L  Q EQ+VC+ALKE+++AA A
Sbjct: 219 SINSQFQDAITSTAGRLKLINSMEGIVKGAQQKLEKVQLGLQAEQKVCDALKERHSAAIA 278

Query: 259 EQRRCYALLKAFQEECAKNEKLRTQNS 286
           EQRRCY+LLKAFQEEC KNE+L+ Q S
Sbjct: 279 EQRRCYSLLKAFQEECTKNERLQRQTS 303

[Close]
BLAST of CmoCh05G006850 vs. TrEMBL
Match: A0A0D2U627_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G238600 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.8e-68
Identity = 144/259 (55.60%), Postives = 200/259 (77.22%), Query Frame = 1 

Query: 27  LVGNQKKVAVVKDLQFLQDRVSKANANHVVQNLMSCLKTLEDLGKQESELLSPCDAQRIK 86
           ++ NQ+K++V+ +LQ LQ+++ K  A   V+  +S L+ L+ L +QESE+    D +R  
Sbjct: 5   MIQNQRKISVLNELQNLQEKIRKEGAESKVKKFVSLLENLKLLERQESEIRCDFDEKRSS 64

Query: 87  LQAEIFELEGRLTGDHEGSNFLDSLDNFISESEEELNSVKKALASRLRETLALKRLLDDV 146
           L+AE+ +LE ++    +       LD  ++ES ++LNS K+ LA++LR  +++KR LDD 
Sbjct: 65  LEAEVSDLEEKIAAGSDSKMLSRGLDGSLNESLQKLNSAKRELAAKLRAIVSIKRQLDDA 124

Query: 147 PTQTELIQYERRFSELYINIQDKHRQTRRYYATYNALLEIKDLMLKETSLLNSISSQFQD 206
           P+Q+ELIQYE R SEL  +IQ+K +QTR++YATYNALLEIK+LMLKETSLLNSI+SQFQ+
Sbjct: 125 PSQSELIQYECRLSELNAHIQEKLQQTRKFYATYNALLEIKELMLKETSLLNSINSQFQE 184

Query: 207 AIANSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCNALKEKYAAATAEQRRCYAL 266
           AIA++  +MKL+ESM+GI+KG QQKL KV L  QEEQ+VC+ALKE+Y AA AEQRRCY+L
Sbjct: 185 AIASTTGRMKLLESMQGIVKGSQQKLGKVQLGLQEEQKVCDALKERYTAAMAEQRRCYSL 244

Query: 267 LKAFQEECAKNEKLRTQNS 286
           LKAFQEECA+NEKL++Q S
Sbjct: 245 LKAFQEECARNEKLQSQTS 263

[Close]
BLAST of CmoCh05G006850 vs. TrEMBL
Match: A0A067KJ69_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13220 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.6e-68
Identity = 153/271 (56.46%), Postives = 205/271 (75.65%), Query Frame = 1 

Query: 16  SMDILKEDVDELVGNQKKVAVVKDLQFLQDRVSK-ANANHVVQNLMSCLKTLEDLGKQES 75
           S++ L  ++D+   N++K  ++ DLQ L+ R+ +    N  VQ L+  L +L+ L +QES
Sbjct: 33  SIEKLTSNLDKQ--NERKANLLNDLQQLRARIEEDETVNGAVQKLVRLLYSLKALERQES 92

Query: 76  ELLSPCDAQRIKLQAEIFELEGRLTGDHEGSNFLDSLDNFISESEEELNSVKKALASRLR 135
            L S  +A+R +L+ E++EL+ ++    +      +LD  ++ES E+LNS KK LA++LR
Sbjct: 93  VLQSNYNAKRSQLEREVYELQEKIENVCDSEALSKNLDCLLAESLEQLNSAKKELAAKLR 152

Query: 136 ETLALKRLLDDVPTQTELIQYERRFSELYINIQDKHRQTRRYYATYNALLEIKDLMLKET 195
             L++KR +DD+PTQ+ELIQYER FSEL ++IQ+KHRQTR+YYATYNALLEIK+LMLKET
Sbjct: 153 ALLSIKRQIDDIPTQSELIQYERCFSELNVHIQEKHRQTRKYYATYNALLEIKELMLKET 212

Query: 196 SLLNSISSQFQDAIANSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCNALKEKYA 255
           SLLNSISSQFQDA+ +S  +MKLI SMEGI KG QQKL KV +  QEEQ+ C+ALK+KYA
Sbjct: 213 SLLNSISSQFQDALTSSDGRMKLINSMEGIAKGSQQKLQKVQVGLQEEQKACDALKKKYA 272

Query: 256 AATAEQRRCYALLKAFQEECAKNEKLRTQNS 286
            A AEQR CYALLKA QEECAKNEKL++Q+S
Sbjct: 273 VAMAEQRDCYALLKALQEECAKNEKLQSQSS 301

[Close]
BLAST of CmoCh05G006850 vs. TrEMBL
Match: W9SY13_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002524 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 8.1e-68
Identity = 147/256 (57.42%), Postives = 196/256 (76.56%), Query Frame = 1 

Query: 30  NQKKVAVVKDLQFLQDRVSKANANHVVQNLMSCLKTLEDLGKQESELLSPCDAQRIKLQA 89
           NQ+KV VV  LQ L++R+S   A   VQ   S +++L+D+ K+ESE LS   A+R +L+A
Sbjct: 121 NQRKVGVVSQLQQLRERISMEGAETKVQKFASLMQSLKDMEKKESEFLSYSGAKRYQLEA 180

Query: 90  EIFELEGRLTGDHEGSNFLDSLDNFISESEEELNSVKKALASRLRETLALKRLLDDVPTQ 149
           E+  L+ ++ G  +  +  D LD  +SES EELNS +K LA+ LR  LA+KR LDDVP+Q
Sbjct: 181 EVIYLKEKIAGGCDSKSLSDGLDRSLSESAEELNSARKELAATLRAILAVKRQLDDVPSQ 240

Query: 150 TELIQYERRFSELYINIQDKHRQTRRYYATYNALLEIKDLMLKETSLLNSISSQFQDAIA 209
           +ELIQYERR S+LY +IQ KH+QT+++Y TYNALLEIK+LMLKETSLLNSISSQFQ+AI 
Sbjct: 241 SELIQYERRLSDLYGHIQGKHQQTQKHYDTYNALLEIKELMLKETSLLNSISSQFQNAIT 300

Query: 210 NSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCNALKEKYAAATAEQRRCYALLKA 269
           ++  +MKLI+SMEGI+KG QQKL KV L  +E++++ +ALKE+Y AA A QR+ Y+LLKA
Sbjct: 301 STAGRMKLIDSMEGIVKGSQQKLQKVRLGLEEQEKIRDALKERYTAAIAAQRQWYSLLKA 360

Query: 270 FQEECAKNEKLRTQNS 286
           FQE CAKNE+LR+  S
Sbjct: 361 FQEACAKNERLRSSTS 376

[Close]
BLAST of CmoCh05G006850 vs. TAIR10
Match: AT4G32560.1 (AT4G32560.1 paramyosin-related)

HSP 1 Score: 240.7 bits (613), Expect = 1.1e-63
Identity = 136/256 (53.12%), Postives = 183/256 (71.48%), Query Frame = 1 

Query: 30  NQKKVAVVKDLQFLQDRVSKANANHVVQNLMSCLKTLEDLGKQESELLSPCDAQRIKLQA 89
           NQ+K      LQ L++R+SK   +  VQ L+  L++L++  K+ESE+ S C+ +R  L+ 
Sbjct: 45  NQRKCDAKDKLQQLRERISKEVVDVSVQELIPLLRSLKEFVKEESEVRSRCNVKRSALED 104

Query: 90  EIFELEGRLTGDHEGSNFLDSLDNFISESEEELNSVKKALASRLRETLALKRLLDDVPTQ 149
            + +LE R     +G    + LD  +  S + L S KK L + LRE ++LKR +DDVP Q
Sbjct: 105 AVHDLEERAGKGLDGEIQEEDLDGLLVVSLDNLTSAKKELGATLREIVSLKRQIDDVPCQ 164

Query: 150 TELIQYERRFSELYINIQDKHRQTRRYYATYNALLEIKDLMLKETSLLNSISSQFQDAIA 209
           +EL+QYERRFSEL + IQ+K +QTR+ YATYNALLEIKDLMLKETSLLNSI SQFQD I 
Sbjct: 165 SELLQYERRFSELNVCIQEKLQQTRKLYATYNALLEIKDLMLKETSLLNSIGSQFQDVIG 224

Query: 210 NSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCNALKEKYAAATAEQRRCYALLKA 269
               ++KLI+SMEG++KGIQQK+ K+ L  QEEQ++ +A KEKY AA AEQR+CY +L+A
Sbjct: 225 TPAGRVKLIDSMEGVMKGIQQKIGKIQLGLQEEQRLRDASKEKYIAAAAEQRKCYTVLRA 284

Query: 270 FQEECAKNEKLRTQNS 286
           +QEEC KNE+LR+  S
Sbjct: 285 YQEECTKNERLRSHIS 300

[Close]
BLAST of CmoCh05G006850 vs. NCBI nr
Match: gi|659088748|ref|XP_008445141.1| (PREDICTED: coiled-coil domain-containing protein 93 isoform X3 [Cucumis melo])

HSP 1 Score: 413.3 bits (1061), Expect = 3.4e-112
Identity = 233/277 (84.12%), Postives = 249/277 (89.89%), Query Frame = 1 

Query: 8   QVDSDNGVSMDILKEDVDELVGNQKKVAVVKDLQFLQDRVSKANANHVVQNLMSCLKTLE 67
           QVD DNGVSM +LKED+DEL  +QKKVA+VKDLQ L+DRV K +AN VVQNLMSCLKTLE
Sbjct: 26  QVDPDNGVSM-VLKEDMDEL--DQKKVAMVKDLQLLRDRVDKVDAN-VVQNLMSCLKTLE 85

Query: 68  DLGKQESELLSPCDAQRIKLQAEIFELEGRLTGDHEGSNFLDSLDNFISESEEELNSVKK 127
           DLGKQESE LS  +++R +LQ EI EL GRLTGDHE SNF DSLD+ IS SEEEL+SVKK
Sbjct: 86  DLGKQESEFLSTSNSKRSELQDEIIELGGRLTGDHECSNFFDSLDDLISASEEELDSVKK 145

Query: 128 ALASRLRETLALKRLLDDVPTQTELIQYERRFSELYINIQDKHRQTRRYYATYNALLEIK 187
           AL S +RETLALKRLLDDVPTQTELIQYERRFSELYINIQDK RQTRRYYATYNALLEIK
Sbjct: 146 ALMSSVRETLALKRLLDDVPTQTELIQYERRFSELYINIQDKLRQTRRYYATYNALLEIK 205

Query: 188 DLMLKETSLLNSISSQFQDAIANSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCN 247
           DLMLKETSLLNSISSQFQDAIA+S S+MKLI+SM GILKGIQQKLDKV LSHQEEQQVCN
Sbjct: 206 DLMLKETSLLNSISSQFQDAIASSASKMKLIDSMVGILKGIQQKLDKVNLSHQEEQQVCN 265

Query: 248 ALKEKYAAATAEQRRCYALLKAFQEECAKNEKLRTQN 285
           ALKEKYAAA  EQRRCY LLKAFQEECAKNEKLRTQN
Sbjct: 266 ALKEKYAAAAVEQRRCYTLLKAFQEECAKNEKLRTQN 298

[Close]
BLAST of CmoCh05G006850 vs. NCBI nr
Match: gi|449441954|ref|XP_004138747.1| (PREDICTED: coiled-coil domain-containing protein 93 isoform X1 [Cucumis sativus])

HSP 1 Score: 409.5 bits (1051), Expect = 5.0e-111
Identity = 232/277 (83.75%), Postives = 248/277 (89.53%), Query Frame = 1 

Query: 8   QVDSDNGVSMDILKEDVDELVGNQKKVAVVKDLQFLQDRVSKANANHVVQNLMSCLKTLE 67
           QVD DNGV MD LKED+DEL  NQKKVA+VKDLQ L+DRV KA+AN VVQNL SCLKTLE
Sbjct: 26  QVDPDNGVWMD-LKEDMDEL--NQKKVAMVKDLQLLRDRVDKADAN-VVQNLKSCLKTLE 85

Query: 68  DLGKQESELLSPCDAQRIKLQAEIFELEGRLTGDHEGSNFLDSLDNFISESEEELNSVKK 127
           DLGKQESE +S C+++R +LQ EI EL GRLT DHE  NF DSLD+ IS SEEEL+SVKK
Sbjct: 86  DLGKQESEFMSTCNSKRSELQDEIIELGGRLTEDHECLNFFDSLDDLISASEEELDSVKK 145

Query: 128 ALASRLRETLALKRLLDDVPTQTELIQYERRFSELYINIQDKHRQTRRYYATYNALLEIK 187
           ALA  +RETLALKRLLDDVPTQTELIQYERRFSELY NIQDK RQTRRYYATYNALLEIK
Sbjct: 146 ALALSVRETLALKRLLDDVPTQTELIQYERRFSELYTNIQDKLRQTRRYYATYNALLEIK 205

Query: 188 DLMLKETSLLNSISSQFQDAIANSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCN 247
           DLMLKETSLLNSISSQFQDAIA+S S+MKLI+SM GILKGIQQKL+KV LSHQEEQQVCN
Sbjct: 206 DLMLKETSLLNSISSQFQDAIASSASKMKLIDSMVGILKGIQQKLNKVHLSHQEEQQVCN 265

Query: 248 ALKEKYAAATAEQRRCYALLKAFQEECAKNEKLRTQN 285
           ALKEKYAAATAEQRRCY LLKAFQEECAKNEKLRTQN
Sbjct: 266 ALKEKYAAATAEQRRCYTLLKAFQEECAKNEKLRTQN 298

[Close]
BLAST of CmoCh05G006850 vs. NCBI nr
Match: gi|778672365|ref|XP_011649795.1| (PREDICTED: coiled-coil domain-containing protein 93 isoform X2 [Cucumis sativus])

HSP 1 Score: 390.6 bits (1002), Expect = 2.4e-105
Identity = 216/255 (84.71%), Postives = 231/255 (90.59%), Query Frame = 1 

Query: 30  NQKKVAVVKDLQFLQDRVSKANANHVVQNLMSCLKTLEDLGKQESELLSPCDAQRIKLQA 89
           NQKKVA+VKDLQ L+DRV KA+AN VVQNL SCLKTLEDLGKQESE +S C+++R +LQ 
Sbjct: 10  NQKKVAMVKDLQLLRDRVDKADAN-VVQNLKSCLKTLEDLGKQESEFMSTCNSKRSELQD 69

Query: 90  EIFELEGRLTGDHEGSNFLDSLDNFISESEEELNSVKKALASRLRETLALKRLLDDVPTQ 149
           EI EL GRLT DHE  NF DSLD+ IS SEEEL+SVKKALA  +RETLALKRLLDDVPTQ
Sbjct: 70  EIIELGGRLTEDHECLNFFDSLDDLISASEEELDSVKKALALSVRETLALKRLLDDVPTQ 129

Query: 150 TELIQYERRFSELYINIQDKHRQTRRYYATYNALLEIKDLMLKETSLLNSISSQFQDAIA 209
           TELIQYERRFSELY NIQDK RQTRRYYATYNALLEIKDLMLKETSLLNSISSQFQDAIA
Sbjct: 130 TELIQYERRFSELYTNIQDKLRQTRRYYATYNALLEIKDLMLKETSLLNSISSQFQDAIA 189

Query: 210 NSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCNALKEKYAAATAEQRRCYALLKA 269
           +S S+MKLI+SM GILKGIQQKL+KV LSHQEEQQVCNALKEKYAAATAEQRRCY LLKA
Sbjct: 190 SSASKMKLIDSMVGILKGIQQKLNKVHLSHQEEQQVCNALKEKYAAATAEQRRCYTLLKA 249

Query: 270 FQEECAKNEKLRTQN 285
           FQEECAKNEKLRTQN
Sbjct: 250 FQEECAKNEKLRTQN 263

[Close]
BLAST of CmoCh05G006850 vs. NCBI nr
Match: gi|659088744|ref|XP_008445139.1| (PREDICTED: coiled-coil domain-containing protein 93 isoform X1 [Cucumis melo])

HSP 1 Score: 388.3 bits (996), Expect = 1.2e-104
Identity = 220/264 (83.33%), Postives = 236/264 (89.39%), Query Frame = 1 

Query: 8   QVDSDNGVSMDILKEDVDELVGNQKKVAVVKDLQFLQDRVSKANANHVVQNLMSCLKTLE 67
           QVD DNGVSM +LKED+DEL  +QKKVA+VKDLQ L+DRV K +AN VVQNLMSCLKTLE
Sbjct: 26  QVDPDNGVSM-VLKEDMDEL--DQKKVAMVKDLQLLRDRVDKVDAN-VVQNLMSCLKTLE 85

Query: 68  DLGKQESELLSPCDAQRIKLQAEIFELEGRLTGDHEGSNFLDSLDNFISESEEELNSVKK 127
           DLGKQESE LS  +++R +LQ EI EL GRLTGDHE SNF DSLD+ IS SEEEL+SVKK
Sbjct: 86  DLGKQESEFLSTSNSKRSELQDEIIELGGRLTGDHECSNFFDSLDDLISASEEELDSVKK 145

Query: 128 ALASRLRETLALKRLLDDVPTQTELIQYERRFSELYINIQDKHRQTRRYYATYNALLEIK 187
           AL S +RETLALKRLLDDVPTQTELIQYERRFSELYINIQDK RQTRRYYATYNALLEIK
Sbjct: 146 ALMSSVRETLALKRLLDDVPTQTELIQYERRFSELYINIQDKLRQTRRYYATYNALLEIK 205

Query: 188 DLMLKETSLLNSISSQFQDAIANSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCN 247
           DLMLKETSLLNSISSQFQDAIA+S S+MKLI+SM GILKGIQQKLDKV LSHQEEQQVCN
Sbjct: 206 DLMLKETSLLNSISSQFQDAIASSASKMKLIDSMVGILKGIQQKLDKVNLSHQEEQQVCN 265

Query: 248 ALKEKYAAATAEQRRCYALLKAFQ 272
           ALKEKYAAA  EQRRCY LLKAFQ
Sbjct: 266 ALKEKYAAAAVEQRRCYTLLKAFQ 285

[Close]
BLAST of CmoCh05G006850 vs. NCBI nr
Match: gi|659088746|ref|XP_008445140.1| (PREDICTED: coiled-coil domain-containing protein 93 isoform X2 [Cucumis melo])

HSP 1 Score: 376.7 bits (966), Expect = 3.6e-101
Identity = 211/253 (83.40%), Postives = 227/253 (89.72%), Query Frame = 1 

Query: 19  ILKEDVDELVGNQKKVAVVKDLQFLQDRVSKANANHVVQNLMSCLKTLEDLGKQESELLS 78
           +LKED+DEL  +QKKVA+VKDLQ L+DRV K +AN VVQNLMSCLKTLEDLGKQESE LS
Sbjct: 2   VLKEDMDEL--DQKKVAMVKDLQLLRDRVDKVDAN-VVQNLMSCLKTLEDLGKQESEFLS 61

Query: 79  PCDAQRIKLQAEIFELEGRLTGDHEGSNFLDSLDNFISESEEELNSVKKALASRLRETLA 138
             +++R +LQ EI EL GRLTGDHE SNF DSLD+ IS SEEEL+SVKKAL S +RETLA
Sbjct: 62  TSNSKRSELQDEIIELGGRLTGDHECSNFFDSLDDLISASEEELDSVKKALMSSVRETLA 121

Query: 139 LKRLLDDVPTQTELIQYERRFSELYINIQDKHRQTRRYYATYNALLEIKDLMLKETSLLN 198
           LKRLLDDVPTQTELIQYERRFSELYINIQDK RQTRRYYATYNALLEIKDLMLKETSLLN
Sbjct: 122 LKRLLDDVPTQTELIQYERRFSELYINIQDKLRQTRRYYATYNALLEIKDLMLKETSLLN 181

Query: 199 SISSQFQDAIANSMSQMKLIESMEGILKGIQQKLDKVLLSHQEEQQVCNALKEKYAAATA 258
           SISSQFQDAIA+S S+MKLI+SM GILKGIQQKLDKV LSHQEEQQVCNALKEKYAAA  
Sbjct: 182 SISSQFQDAIASSASKMKLIDSMVGILKGIQQKLDKVNLSHQEEQQVCNALKEKYAAAAV 241

Query: 259 EQRRCYALLKAFQ 272
           EQRRCY LLKAFQ
Sbjct: 242 EQRRCYTLLKAFQ 251

The following BLAST results are available for this feature:
BLAST of CmoCh05G006850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CCD93_CHICK6.9e-2835.10Coiled-coil domain-containing protein 93 OS=Gallus gallus GN=CCDC93 PE=2 SV=1[more]
CCD93_XENTR7.6e-2731.54Coiled-coil domain-containing protein 93 OS=Xenopus tropicalis GN=ccdc93 PE=2 SV... [more]
CCD93_XENLA1.9e-2530.80Coiled-coil domain-containing protein 93 OS=Xenopus laevis GN=ccdc93 PE=2 SV=1[more]
CCD93_HUMAN3.0e-2332.17Coiled-coil domain-containing protein 93 OS=Homo sapiens GN=CCDC93 PE=1 SV=2[more]
CCD93_MOUSE8.7e-2331.50Coiled-coil domain-containing protein 93 OS=Mus musculus GN=Ccdc93 PE=1 SV=1[more]
BLAST of CmoCh05G006850 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQ22_CUCSA9.8e-9085.25Uncharacterized protein OS=Cucumis sativus GN=Csa_2G379330 PE=4 SV=1[more]
D7SUP2_VITVI1.9e-7257.68Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g04930 PE=4 SV=... [more]
A0A0D2U627_GOSRA2.8e-6855.60Uncharacterized protein OS=Gossypium raimondii GN=B456_013G238600 PE=4 SV=1[more]
A0A067KJ69_JATCU3.6e-6856.46Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13220 PE=4 SV=1[more]
W9SY13_9ROSA8.1e-6857.42Uncharacterized protein OS=Morus notabilis GN=L484_002524 PE=4 SV=1[more]
BLAST of CmoCh05G006850 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G32560.11.1e-6353.13 paramyosin-related[more]
BLAST of CmoCh05G006850 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659088748|ref|XP_008445141.1|3.4e-11284.12PREDICTED: coiled-coil domain-containing protein 93 isoform X3 [Cucumis melo][more]
gi|449441954|ref|XP_004138747.1|5.0e-11183.75PREDICTED: coiled-coil domain-containing protein 93 isoform X1 [Cucumis sativus][more]
gi|778672365|ref|XP_011649795.1|2.4e-10584.71PREDICTED: coiled-coil domain-containing protein 93 isoform X2 [Cucumis sativus][more]
gi|659088744|ref|XP_008445139.1|1.2e-10483.33PREDICTED: coiled-coil domain-containing protein 93 isoform X1 [Cucumis melo][more]
gi|659088746|ref|XP_008445140.1|3.6e-10183.40PREDICTED: coiled-coil domain-containing protein 93 isoform X2 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G006850.1CmoCh05G006850.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 239..259
scor
NoneNo IPR availablePANTHERPTHR16441FIDIPIDINEcoord: 30..283
score: 4.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh05G006850Cucsa.162050Cucumber (Gy14) v1cgycmoB0461
CmoCh05G006850CmaCh12G003110Cucurbita maxima (Rimu)cmacmoB194
CmoCh05G006850CmaCh05G006540Cucurbita maxima (Rimu)cmacmoB786
CmoCh05G006850Cla022287Watermelon (97103) v1cmowmB746
CmoCh05G006850Csa2G379330Cucumber (Chinese Long) v2cmocuB778
CmoCh05G006850MELO3C011219Melon (DHL92) v3.5.1cmomeB719
CmoCh05G006850CSPI02G23070Wild cucumber (PI 183967)cmocpiB783
CmoCh05G006850Lsi08G011570Bottle gourd (USVL1VR-Ls)cmolsiB728
CmoCh05G006850Cp4.1LG11g05810Cucurbita pepo (Zucchini)cmocpeB720
CmoCh05G006850MELO3C011219.2Melon (DHL92) v3.6.1cmomedB816
CmoCh05G006850CsaV3_2G031690Cucumber (Chinese Long) v3cmocucB0919
CmoCh05G006850Cla97C08G156250Watermelon (97103) v2cmowmbB800
CmoCh05G006850Bhi04G000829Wax gourdcmowgoB0947
CmoCh05G006850CsGy2G022810Cucumber (Gy14) v2cgybcmoB239
CmoCh05G006850Carg08340Silver-seed gourdcarcmoB0087
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh05G006850CmoCh12G002610Cucurbita moschata (Rifu)cmocmoB151
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh05G006850Cucurbita moschata (Rifu)cmocmoB159
CmoCh05G006850Cucurbita moschata (Rifu)cmocmoB373
CmoCh05G006850Cucurbita maxima (Rimu)cmacmoB486
CmoCh05G006850Watermelon (Charleston Gray)cmowcgB713
CmoCh05G006850Cucurbita pepo (Zucchini)cmocpeB747
CmoCh05G006850Cucurbita pepo (Zucchini)cmocpeB754
CmoCh05G006850Silver-seed gourdcarcmoB1318
CmoCh05G006850Silver-seed gourdcarcmoB1320