CmoCh05G005780 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCACGTTGTGCTCGAGAACCTTCCCGCGGCTGCAACTGGAAGTCAGCGACCGTAAACGCTAAAGAGGTTGAGAATCACACCGGTAAATCGTCAGCGGAATTGTGAACCATGTCTGCCGATCTTCGATGCGTGATCGTGGCCGTTGACGGCAGCGAGGAGAGCATGGGCGCTTTACGGTGGGCGTTTGAAAATCTCAAGCTCCGTTCATCGGCGCCGGACTCCAATGACGGTACTTTTATTGTGCTGCATGTTCAACCTCCTCCTACAATCGCCGCCGGTCTCAGTCCTGGTCCAATCCCCTTTGGTGGCCCTAGTTGAGTCCTATACTATTTTCTCACGCTCATTTCTGAGCTGTTGTTGGGAGTTATCTAAGTTTAATGTTTTAATTTGATGTAGGCGATCTGGAGGTTCCTGCTTTCACGGCAGCGATTGAGTCGCATCAGAGGCGGATTACAGCTGCGATATTGGATCATGCTTCACGGATTTGCTCCGAGTACAAAGTTAGGCTCCACTATTTGGAACCTTTCGCCTAAATTCATTTTCATTGTGCTCTTTTAACTCGGTTATTCTTGCTAATTGCGACTCTGCGAGTTAGCATAGATATTTTACTTCGGATTGCAAACTTCTTAATAGAATTTAACTGGTCAAATTAGTTATTAGTGGATTTGAATCGTTTAGCCCCCTTTAACCATTTGGTTTTTGGTTTTTGAAACTCAAGCATATAAATACTACTTCCATCTGCAAATGTTTGTTGTCAAACGGGCTTAATTTTCAGAAAATATTATGAATTGTTAGTGTGTGGTGGTGTACGGTATGCCGTCAATTTAGAGTCAAGGAGAACAATCTCAGTGAAATCTTCAGATCTCTTTCACTTTGTGTCGTTTCTTTTATTCTTTTATCCCGAAACTAATGAAATTACGCAATAATTTGCTTCAACAATTTTTATATATGGTGTATTCTTGCTTGTCGAGTGCTTTTAGTTTCCTTAATGTATCTGTGGGTATCAATTTCAAGTCAGCGAGGCATTTTCTCCAGTTGAACTAATGGTTGCAGCAAACTCATTATGCAATTTTTAGGTGAACGTGGAAACTAAAGTGGTAATCGGAGATCCAAAGGAAAAGATCTGTGAAGCGGCTGAGAATTTGCATGCTGATTTGCTAGTTATGGGGTCCCGTGCTTTTGGCCCCATCAAAAGGTATGGTTACATAATAGTCTTAGCTAATGTCGATCGCTATTTTTCTGCAAGCCACACTATGATCAAATAGTAGCTGTTGCTTCTTGGTATGAATAATGCTAGCATGTAGATTTTGTGATGTTAGAGACTGTACTGTATTGCTAACTATTAAAATCTGATGCGTCAAATAATTCATCAAATCATCTGCTTGCCTATTCCAAGTATTCCAGTCTTGTCTCCAAATTAAAAGTAAAGCTAGAGTGACTTTGTTGCATATTCCAAGTATTCCAGTCCTTATCAAATCAACGGAGACTAGCTTAAAGCTCAAATCTCCCTTGATCGATGTTATTTGGAAATTCAATGTTCCAAACAAGATTAAAGTTCTTTTGTGAAGCCTTTCCTATAAAAATTTGAATACTCGTGAAAGGCTACAACGTAAGCTCACGACTATGTCTCGTTCCCCTTTGGTGTGTGCCTTATGCCTGAAAGATGAATAATCCATGGAACACCTTTTCCTTAACTGCTATCCTGCTTCGAGAGGGTGGAATCAGATCCTTAAAGCTTTTGGTTTTTCTGTTTAACGGCCTGAGATGATTAAGGATTGGCTTATTGAAGCTTTAAATGGTTGGATCTTTAAAGGCAGGAGTAAAATCTTATGGAGGTGTGCTACCCGGATGCTTGTTTGGGAGTTACGGAAGAAGAGAAATAAAAGGATTCTTTAAAGAAAAGTCTATTACTTTTGATTCTTTTTTCAGCAATATAGAAATTGCGTTCTCTCTATGGTGTCTTAGAAACATGAATTTTTTTTTGTATAATTGTAGCCCAACTCAACTACTCCACAATTGGGAAGCTGTGCTCCATTAGTCTTTTGTTTGTGAGGGGGTTCCTCGCCCCTGCCCTTATTCTGTTCCCTTTTGTTTTTCAACATACACTCATATATATAAGATATCAATGATCTGATAGGCAATAACCACCAAAAATAACAGATGCAGAGGAACACACAAGAACTCTCCCTCTTAGAGGAAACTCTAAGCCCAAAATTCCAACATGTTCCAATGCCATGCAAGGGCCTCCTACTGGACAAGATAAACGTGATGCTTCCTATGGCCATGGTTAATACGTATTTTAGAAAGCGCAAAGAAGGAATTCACCACCGACAGTTAGTTAGAAGTCAGAGAAGTATGGTTAGTGAGCTCATACGCTTATATGTTTGGGGGGATGCCGTAGAAGGTGGCTTTTATTTTGAAATAGGAGCAGTGTGAGGAGCAGTGTGAGGAGGGTGAGTAAAGCCCTTGTGACTGTTCTTCCTGCTCTTAATATCATGAATTATAAGGGAGATACCTTACAAGGTCACCTGTCCTATTACAAAATTGGGGACCGTAGTACCTACTCCATTAACAATTCCATCAACACTCGCCAACTACTGATCTTCTCCCTTCCCCACTTGCACTCCTAGTGTATGTGCAGCACACCAGCAGTCTCGCTTTGCTATCATGACCATCTTGTTTTATGTTTTATTACTTACCATTGTTTTGTTATCATATTCCGGACCACTATTGTCGATATAGTTCCTTGCATTTTGTTGGAAAATAACTTCGATCGACTGCTGAAGTGAATGGATTATTTACATGCCTTTGTGATCATACTGCTTCATGCAGGATGTTCTTGGGAAGTGTCAGCAACTACTGCACCAATCATGTAGAATGCCCAGTCATCATAGTCAAGGACAAGAAAAGGGGCAGTTCGGCTTGATCTTAATAGGTACACCCAACTCTTCATGCATTCGAGCCTAAAAGATTTCCGTACCACCGATTTTCTCTGTTTTTATGTCGTTGTAGATATCTCCTGGCACTTTTATGTTGATTGAGATTTGCTTATATACATAATTGAGTCACCATTGTTCTCATATCTTACCTTGAAAATGAAACGAAGCAAATGTTCACCACGATTCAATTTGTCCATTCTGTGAATACGTTATGTCTCCTTATTCAACTATATAAGTCCAGATTTAATACTCCTTTAGTTCCCCCCAACCCCCTGCTCAAATTTGATTCTTGTTTGCAGCAATGCTAATATAAATATAACTAATCATTATATATTTCACTTAGATTGCAGGTTTCTCTTTCGTTATGTGTGCCCGTTACCGTCTTATCAATGCTGATGCTCGTGACACGTATTATTCATCAATTGGTTTGCTTTTCTGCTTCCCGTTCTGCTATTTTGTATTGTGCGAGCCATCTTGTGCAGCCATAGGCAAGTTTCCAAAACAGTAAACAGGAAGTTCCTCTGTTTCTGTATTTCCTAGGCTTCGCGACATCACCTGTTGCCCCCATTGTTTACAGACAAATCCTTGTCCAGCTGACCATCTTCCATGGCTTGGCTACTGAAAATTGTCCTGTCCGAGTAAAATTGTGTATTATTCTTTCTATTTTGTCCCTGCATGTCAAAAAGCTGGGTTGAACCTTTTTTTCTGTTACAGCAGATATTTGTTGTGAAATTATTGTGCCTCGACTCTTGGACAGAAGGACTGTGAATGTGATTCCTTTTTGGGGAGACACGTGGCTCCTGTGTGGCATGTGACTTTTTCTTTCCCTTTCTCTGAATTATATGATTGTATGAAATAATAATTGAAAATTCACCGTCCTGTACTTTGGCTTGTTATCATATTTTGGTTGTAATGCTTTCATTTTATAATCATTGAGTCCTTATTTCTA TCACGTTGTGCTCGAGAACCTTCCCGCGGCTGCAACTGGAAGTCAGCGACCGTAAACGCTAAAGAGGTTGAGAATCACACCGGTAAATCGTCAGCGGAATTGTGAACCATGTCTGCCGATCTTCGATGCGTGATCGTGGCCGTTGACGGCAGCGAGGAGAGCATGGGCGCTTTACGGTGGGCGTTTGAAAATCTCAAGCTCCGTTCATCGGCGCCGGACTCCAATGACGGTACTTTTATTGTGCTGCATGTTCAACCTCCTCCTACAATCGCCGCCGGTCTCAGTCCTGGTCCAATCCCCTTTGGTGGCCCTAGCGATCTGGAGGTTCCTGCTTTCACGGCAGCGATTGAGTCGCATCAGAGGCGGATTACAGCTGCGATATTGGATCATGCTTCACGGATTTGCTCCGAGTACAAAGTGAACGTGGAAACTAAAGTGGTAATCGGAGATCCAAAGGAAAAGATCTGTGAAGCGGCTGAGAATTTGCATGCTGATTTGCTAGTTATGGGGTCCCGTGCTTTTGGCCCCATCAAAAGGATGTTCTTGGGAAGTGTCAGCAACTACTGCACCAATCATGTAGAATGCCCAGTCATCATAGTCAAGGACAAGAAAAGGGGCAGTTCGGCTTGATCTTAATAGATTGCAGGTTTCTCTTTCGTTATGTGTGCCCGTTACCGTCTTATCAATGCTGATGCTCGTGACACGTATTATTCATCAATTGGTTTGCTTTTCTGCTTCCCGTTCTGCTATTTTGTATTGTGCGAGCCATCTTGTGCAGCCATAGGCAAGTTTCCAAAACAGTAAACAGGAAGTTCCTCTGTTTCTGTATTTCCTAGGCTTCGCGACATCACCTGTTGCCCCCATTGTTTACAGACAAATCCTTGTCCAGCTGACCATCTTCCATGGCTTGGCTACTGAAAATTGTCCTGTCCGAGTAAAATTGTGTATTATTCTTTCTATTTTGTCCCTGCATGTCAAAAAGCTGGGTTGAACCTTTTTTTCTGTTACAGCAGATATTTGTTGTGAAATTATTGTGCCTCGACTCTTGGACAGAAGGACTGTGAATGTGATTCCTTTTTGGGGAGACACGTGGCTCCTGTGTGGCATGTGACTTTTTCTTTCCCTTTCTCTGAATTATATGATTGTATGAAATAATAATTGAAAATTCACCGTCCTGTACTTTGGCTTGTTATCATATTTTGGTTGTAATGCTTTCATTTTATAATCATTGAGTCCTTATTTCTA ATGTCTGCCGATCTTCGATGCGTGATCGTGGCCGTTGACGGCAGCGAGGAGAGCATGGGCGCTTTACGGTGGGCGTTTGAAAATCTCAAGCTCCGTTCATCGGCGCCGGACTCCAATGACGGTACTTTTATTGTGCTGCATGTTCAACCTCCTCCTACAATCGCCGCCGGTCTCAGTCCTGGTCCAATCCCCTTTGGTGGCCCTAGCGATCTGGAGGTTCCTGCTTTCACGGCAGCGATTGAGTCGCATCAGAGGCGGATTACAGCTGCGATATTGGATCATGCTTCACGGATTTGCTCCGAGTACAAAGTGAACGTGGAAACTAAAGTGGTAATCGGAGATCCAAAGGAAAAGATCTGTGAAGCGGCTGAGAATTTGCATGCTGATTTGCTAGTTATGGGGTCCCGTGCTTTTGGCCCCATCAAAAGGATGTTCTTGGGAAGTGTCAGCAACTACTGCACCAATCATGTAGAATGCCCAGTCATCATAGTCAAGGACAAGAAAAGGGGCAGTTCGGCTTGA
BLAST of CmoCh05G005780 vs. Swiss-Prot
Match: PHO34_ARATH (Universal stress protein PHOS34 OS=Arabidopsis thaliana GN=PHOS34 PE=1 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.1e-12 Identity = 57/180 (31.67%), Postives = 83/180 (46.11%), Query Frame = 1
BLAST of CmoCh05G005780 vs. Swiss-Prot
Match: PHO32_ARATH (Universal stress protein PHOS32 OS=Arabidopsis thaliana GN=PHOS32 PE=1 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.1e-11 Identity = 55/174 (31.61%), Postives = 82/174 (47.13%), Query Frame = 1
BLAST of CmoCh05G005780 vs. Swiss-Prot
Match: USPAL_ARATH (Universal stress protein A-like protein OS=Arabidopsis thaliana GN=At3g01520 PE=1 SV=2) HSP 1 Score: 69.7 bits (169), Expect = 3.5e-11 Identity = 44/145 (30.34%), Postives = 72/145 (49.66%), Query Frame = 1
BLAST of CmoCh05G005780 vs. Swiss-Prot
Match: NHAX_BACSU (Stress response protein NhaX OS=Bacillus subtilis (strain 168) GN=nhaX PE=2 SV=2) HSP 1 Score: 60.5 bits (145), Expect = 2.1e-08 Identity = 49/164 (29.88%), Postives = 77/164 (46.95%), Query Frame = 1
BLAST of CmoCh05G005780 vs. Swiss-Prot
Match: YXIE_BACSU (Universal stress protein YxiE OS=Bacillus subtilis (strain 168) GN=yxiE PE=3 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.4e-07 Identity = 46/159 (28.93%), Postives = 69/159 (43.40%), Query Frame = 1
BLAST of CmoCh05G005780 vs. TrEMBL
Match: A0A0A0LLD9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G371090 PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 2.9e-84 Identity = 153/173 (88.44%), Postives = 166/173 (95.95%), Query Frame = 1
BLAST of CmoCh05G005780 vs. TrEMBL
Match: A0A061FLP7_THECC (Adenine nucleotide alpha hydrolases-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_034492 PE=4 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 5.8e-69 Identity = 132/175 (75.43%), Postives = 146/175 (83.43%), Query Frame = 1
BLAST of CmoCh05G005780 vs. TrEMBL
Match: A0A068CDD7_CATRO (Putative universal stress protein OS=Catharanthus roseus PE=2 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 1.3e-68 Identity = 130/167 (77.84%), Postives = 148/167 (88.62%), Query Frame = 1
BLAST of CmoCh05G005780 vs. TrEMBL
Match: M5XH22_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012379mg PE=4 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 1.7e-68 Identity = 132/169 (78.11%), Postives = 148/169 (87.57%), Query Frame = 1
BLAST of CmoCh05G005780 vs. TrEMBL
Match: E0CRU7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g07360 PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 3.7e-68 Identity = 128/166 (77.11%), Postives = 146/166 (87.95%), Query Frame = 1
BLAST of CmoCh05G005780 vs. TAIR10
Match: AT1G09740.1 (AT1G09740.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 256.9 bits (655), Expect = 8.8e-69 Identity = 125/172 (72.67%), Postives = 145/172 (84.30%), Query Frame = 1
BLAST of CmoCh05G005780 vs. TAIR10
Match: AT3G11930.3 (AT3G11930.3 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 115.2 bits (287), Expect = 4.1e-26 Identity = 73/193 (37.82%), Postives = 101/193 (52.33%), Query Frame = 1
BLAST of CmoCh05G005780 vs. TAIR10
Match: AT3G58450.1 (AT3G58450.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 112.5 bits (280), Expect = 2.7e-25 Identity = 65/171 (38.01%), Postives = 93/171 (54.39%), Query Frame = 1
BLAST of CmoCh05G005780 vs. TAIR10
Match: AT3G62550.1 (AT3G62550.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 112.1 bits (279), Expect = 3.5e-25 Identity = 63/163 (38.65%), Postives = 96/163 (58.90%), Query Frame = 1
BLAST of CmoCh05G005780 vs. TAIR10
Match: AT1G68300.1 (AT1G68300.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 96.7 bits (239), Expect = 1.5e-20 Identity = 64/165 (38.79%), Postives = 90/165 (54.55%), Query Frame = 1
BLAST of CmoCh05G005780 vs. NCBI nr
Match: gi|659088362|ref|XP_008444941.1| (PREDICTED: uncharacterized protein LOC103488134 [Cucumis melo]) HSP 1 Score: 326.2 bits (835), Expect = 3.4e-86 Identity = 159/173 (91.91%), Postives = 166/173 (95.95%), Query Frame = 1
BLAST of CmoCh05G005780 vs. NCBI nr
Match: gi|449461379|ref|XP_004148419.1| (PREDICTED: uncharacterized protein LOC101203754 [Cucumis sativus]) HSP 1 Score: 319.3 bits (817), Expect = 4.1e-84 Identity = 153/173 (88.44%), Postives = 166/173 (95.95%), Query Frame = 1
BLAST of CmoCh05G005780 vs. NCBI nr
Match: gi|694315062|ref|XP_009373939.1| (PREDICTED: uncharacterized protein C167.05-like [Pyrus x bretschneideri]) HSP 1 Score: 270.4 bits (690), Expect = 2.2e-69 Identity = 133/169 (78.70%), Postives = 149/169 (88.17%), Query Frame = 1
BLAST of CmoCh05G005780 vs. NCBI nr
Match: gi|658034385|ref|XP_008352713.1| (PREDICTED: uncharacterized protein C167.05-like [Malus domestica]) HSP 1 Score: 269.2 bits (687), Expect = 4.9e-69 Identity = 134/169 (79.29%), Postives = 149/169 (88.17%), Query Frame = 1
BLAST of CmoCh05G005780 vs. NCBI nr
Match: gi|743802479|ref|XP_011016913.1| (PREDICTED: uncharacterized protein LOC105120428 isoform X2 [Populus euphratica]) HSP 1 Score: 268.9 bits (686), Expect = 6.3e-69 Identity = 134/173 (77.46%), Postives = 150/173 (86.71%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |