CmoCh05G005150 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G005150
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Late embryogenesis abundant hydroxyproline-rich glycoprotein
Location	Cmo_Chr05 : 2496014 .. 2496727 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGCCCGAGCGGATTCACTCTAATCTTCTACCCGTCCATCCCGGGTTCTCTCCCGGCACCTACGTCATTCAGATCCCCAAGGATCAAATCTATCGCATTCCACCTCCTGAAAACGCTTTCATCGTCGAATGTCATCGTAACCCTTCTATCTCCACTTCTAAACGTCGTCGCTCTTGTTGTTTTCGTATCTTCCTCCCTATCTTCATCGTCCTTCTCTTCATCCTCATCCTAGCCCTCGTCCTCCCTCCTCTTCTCACCCCTCCCAAACCCCCCGTCTTTAAGCTCACCAAATTTCGATTCACCCCCTCCACCCGTGACTTCCATATAGTCCTGAATATCCTCAACCCTAACCCTTCTGGCTTCATCGAGTTCAAATCTCCCTCACACGCTTCCCTCTCCTTTCGAAAACACAAAGTCGCTGTGGCTAAGTTCCCTCTTATCCAACAAGAACATGGCTCCCAACGACATGTCGCATTAGCCCTTCACACCAAATCCTCCTCGTTTCCCAAGGAATTGGAGAGACGAATCAAAAACAAGTCGAAGCTCAAAACTTCCATGTCTTTGATGATGGATCTTCCCGCTCATACGAAAGGTCGACTCTCGACACGTCGGAATGTCAAATTTGTTGTCGTTTGTAGCTTCACGGTCAATACGTTGGGAAAAAATTCACATATACTATCACAAGATTGTCAAAGCGAACGCCAATGA

mRNA sequence

ATGGCGGAGCCCGAGCGGATTCACTCTAATCTTCTACCCGTCCATCCCGGGTTCTCTCCCGGCACCTACGTCATTCAGATCCCCAAGGATCAAATCTATCGCATTCCACCTCCTGAAAACGCTTTCATCGTCGAATGTCATCGTAACCCTTCTATCTCCACTTCTAAACGTCGTCGCTCTTGTTGTTTTCGTATCTTCCTCCCTATCTTCATCGTCCTTCTCTTCATCCTCATCCTAGCCCTCGTCCTCCCTCCTCTTCTCACCCCTCCCAAACCCCCCGTCTTTAAGCTCACCAAATTTCGATTCACCCCCTCCACCCGTGACTTCCATATAGTCCTGAATATCCTCAACCCTAACCCTTCTGGCTTCATCGAGTTCAAATCTCCCTCACACGCTTCCCTCTCCTTTCGAAAACACAAAGTCGCTGTGGCTAAGTTCCCTCTTATCCAACAAGAACATGGCTCCCAACGACATGTCGCATTAGCCCTTCACACCAAATCCTCCTCGTTTCCCAAGGAATTGGAGAGACGAATCAAAAACAAGTCGAAGCTCAAAACTTCCATGTCTTTGATGATGGATCTTCCCGCTCATACGAAAGGTCGACTCTCGACACGTCGGAATGTCAAATTTGTTGTCGTTTGTAGCTTCACGGTCAATACGTTGGGAAAAAATTCACATATACTATCACAAGATTGTCAAAGCGAACGCCAATGA

Coding sequence (CDS)

ATGGCGGAGCCCGAGCGGATTCACTCTAATCTTCTACCCGTCCATCCCGGGTTCTCTCCCGGCACCTACGTCATTCAGATCCCCAAGGATCAAATCTATCGCATTCCACCTCCTGAAAACGCTTTCATCGTCGAATGTCATCGTAACCCTTCTATCTCCACTTCTAAACGTCGTCGCTCTTGTTGTTTTCGTATCTTCCTCCCTATCTTCATCGTCCTTCTCTTCATCCTCATCCTAGCCCTCGTCCTCCCTCCTCTTCTCACCCCTCCCAAACCCCCCGTCTTTAAGCTCACCAAATTTCGATTCACCCCCTCCACCCGTGACTTCCATATAGTCCTGAATATCCTCAACCCTAACCCTTCTGGCTTCATCGAGTTCAAATCTCCCTCACACGCTTCCCTCTCCTTTCGAAAACACAAAGTCGCTGTGGCTAAGTTCCCTCTTATCCAACAAGAACATGGCTCCCAACGACATGTCGCATTAGCCCTTCACACCAAATCCTCCTCGTTTCCCAAGGAATTGGAGAGACGAATCAAAAACAAGTCGAAGCTCAAAACTTCCATGTCTTTGATGATGGATCTTCCCGCTCATACGAAAGGTCGACTCTCGACACGTCGGAATGTCAAATTTGTTGTCGTTTGTAGCTTCACGGTCAATACGTTGGGAAAAAATTCACATATACTATCACAAGATTGTCAAAGCGAACGCCAATGA

Homology

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BLAST of CmoCh05G005150 vs. TrEMBL
Match: A0A0A0LK43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G307330 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.6e-82
Identity = 172/246 (69.92%), Postives = 197/246 (80.08%), Query Frame = 1


Query: 1   MAEPERIHSNLLPVHPG--------FSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSI 60
           MAEPE       PVHP         FS GTYV+QIPKDQIYRIPPPENA IVE HRNPS+
Sbjct: 1   MAEPEPE-----PVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSV 60

Query: 61  STSKRRRSCCFRIFLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIV 120
            TS RRRSCCFRIFLPIF++LL I+ILAL+LPPLLT PKPPV +L KF+ TPSTR+F I 
Sbjct: 61  VTSSRRRSCCFRIFLPIFVLLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLIN 120

Query: 121 LNILNPNPSGFIEFKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPK 180
           L+ILNPN  G I FKSPS  SLSFRK+++A  KFPLI+Q+HGS++ VAL+L  K S+FPK
Sbjct: 121 LDILNPNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAK-SAFPK 180

Query: 181 ELERRIK-NKSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQD 238
           EL+RR+K NK+KL TS+SL M+L A T GRLS RRNVKFVV CSFTVNTLGKNS ILSQD
Sbjct: 181 ELKRRMKNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQD 240

[Close]

BLAST of CmoCh05G005150 vs. TrEMBL
Match: M5Y5Z5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014613mg PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.3e-30
Identity = 88/228 (38.60%), Postives = 129/228 (56.58%), Query Frame = 1


Query: 18  FSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRSCCFRIFLPIFIVLLFIL 77
           F  GTY++Q+PKDQIYR+PPPE+A IVE HR+  ++  K    CC  I    FIVLL I 
Sbjct: 49  FRSGTYIVQVPKDQIYRMPPPEHATIVERHRDSGVN-KKSCSYCCLGII--AFIVLLIIT 108

Query: 78  ILALVLPPLLTPPKPPVFKLTK--FRFTPSTRDFHIVLNILNPNPSGFIEFKSPSHASLS 137
           ++A++L  +L     P F + +   +      D+ + L   NPN    I +K    ASL 
Sbjct: 109 LVAVIL-TMLAKSGDPKFSVERVVVKGKSGRPDYDLTLEARNPNSRVAIVYKDGGGASLY 168

Query: 138 FRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIKN------KSKLKTSMS 197
           F++ K+A  K+P + Q  G  + VAL LH  +   PKE+E+ +K+      K   + S+S
Sbjct: 169 FKQKKIANGKYPSLYQGSGKSKEVALVLHGSNMKLPKEIEKSLKSSYSSTYKKGHRVSLS 228

Query: 198 LMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQSERQ 238
           L MD+PA  +      R+ KF V C  TV+TL K + +L Q+CQ+ER+
Sbjct: 229 LNMDIPARMRIGTLNSRSRKFHVTCDITVDTLAKGTKVLKQECQTERK 272

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BLAST of CmoCh05G005150 vs. TrEMBL
Match: K7KJB0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G103700 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.1e-29
Identity = 86/238 (36.13%), Postives = 128/238 (53.78%), Query Frame = 1


Query: 5   ERIHSNLLPVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRSCCFR 64
           E+ HS      P F+PGTYV+Q+PKDQ+YR+PPPENA I E H+      +K  R C F 
Sbjct: 18  EKKHSTNKLELPDFNPGTYVVQVPKDQVYRVPPPENARIAESHKKAPPKAAKTSRCCLFC 77

Query: 65  I-FLPIFIVLLFIL--ILALVLPPLLTPPKPPVFKLTKFRF--TPSTRDFHIVLNILNPN 124
           + F  IF VLL +L  +L  +   LLT PK P F +T+F+   T     + + L + N N
Sbjct: 78  VLFFIIFFVLLILLGAVLGGLFSMLLT-PKDPQFSITRFKVVETKPHPKYDVTLEVHNLN 137

Query: 125 PSGFIEFKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIK 184
               + +K+  H SLS R+ +VA   +P   Q+   +    + L +     PKE+E  + 
Sbjct: 138 SDVGVSYKNKGHVSLSLRRQEVASGAYPSFNQDAHDRTTFGVTLTSSKVGLPKEVEESVT 197

Query: 185 N-KSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQSER 237
           N K K+  + SL +   A  K  L     +KF V C+  ++TL K + +LSQ C+++R
Sbjct: 198 NDKKKVNVTFSLAIHALARMKMGLLRSGTMKFDVTCNVKLDTLAKTTQVLSQQCETKR 254

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BLAST of CmoCh05G005150 vs. TrEMBL
Match: B9H747_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s16920g PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.0e-28
Identity = 89/251 (35.46%), Postives = 132/251 (52.59%), Query Frame = 1


Query: 8   HSNLLP-VH--------PGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRR 67
           HS+ +P +H        P F PGTYVIQIP+DQIYR+PPP NA + +  RNP     K+ 
Sbjct: 10  HSDAIPKIHDPVATSNQPFFEPGTYVIQIPRDQIYRVPPPGNASVAQRQRNPH---QKKH 69

Query: 68  RSCC-FRIFLPIFIVL---LFILILALVLPPLLTPPKPPVFKLTKF--------RFTPST 127
           +SCC    F   FI +   + + +  + L  +L  PK P F++ +F        +   S 
Sbjct: 70  KSCCGCSCFWCCFIAIASGIAVAVTIVGLSFILLKPKDPEFQVQRFVVKNPQVSKHKYSY 129

Query: 128 RDFHIVLNILNPNPSGFIEFKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTK 187
            ++ I LN+ N N    I ++     SLSFR+  VA  KFP   Q H +   + + L   
Sbjct: 130 TNYDIRLNVHNSNRRSSILYQQGGAVSLSFRQQNVATGKFPTFHQGHKNSTDIGIVLKGT 189

Query: 188 SSSFPKELERRIKN-KSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNS 237
               PK+++  ++N KSK+  S SL M++P   K         + VV C FTV +L +++
Sbjct: 190 GVGLPKDVQNSLRNRKSKVPDSFSLKMNVPVKMKTSGFKTGRAEIVVTCDFTVQSLAQDT 249

[Close]

BLAST of CmoCh05G005150 vs. TrEMBL
Match: A0A059BRD6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02438 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-27
Identity = 85/238 (35.71%), Postives = 133/238 (55.88%), Query Frame = 1


Query: 13  PVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRR-----SCCFRIFL 72
           P H  F+  TYV+QIPKDQIYR+PPPENA IV+ HR P   T  ++R     SCC  +FL
Sbjct: 43  PEH-AFASDTYVVQIPKDQIYRVPPPENALIVKRHRKP---TEPKKRSFCCSSCCCWLFL 102

Query: 73  PIFIVLLFILILALVLPPLLTPPKP-------PVFKLTKFRFTPSTRDFHIVLNILNPNP 132
            I +++L + ILA+V    L    P        V  LTK     +   + + L + NPN 
Sbjct: 103 AIIVIVLVVGILAIVSSVFLKLKNPNFHVDHFVVKDLTKSHDKNTKLVYDVKLKVENPNT 162

Query: 133 SGFIEFKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIKN 192
                +K     SL+F++  +A+ KF    Q+  + + V + L   +++ PKE+++ +++
Sbjct: 163 YSSFTYKQGGAVSLAFKQKAIAMGKFVAFDQDRKTSKAVDIVLKGSNTALPKEMQKSLRS 222

Query: 193 -KSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQSERQ 238
            K+K   + +L +D PA  K  +    + +FV  C FTV+ LGK++ +LSQ CQ+ER+
Sbjct: 223 KKTKNHLTFALHVDAPARRKIGIIKGSSSRFVASCQFTVDKLGKDARVLSQKCQTERK 276

[Close]

BLAST of CmoCh05G005150 vs. TAIR10
Match: AT2G27080.1 (AT2G27080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-13
Identity = 63/240 (26.25%), Postives = 105/240 (43.75%), Query Frame = 1


Query: 9   SNLLPVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRS---CCFRI 68
           S   P  P   P TYVIQ+PKDQIYRIPPPENA     HR   +S  K  RS   CCF  
Sbjct: 23  SGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENA-----HRFEQLSRKKTNRSNCRCCFCS 82

Query: 69  FLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRF--------TPSTRDFHIVLNILN 128
           FL    +L+ +  ++  +  L+  P+ P + +  F          +P +  F++ +   N
Sbjct: 83  FLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRN 142

Query: 129 PNPSGFIEFKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERR 188
            N    + ++  S   + +    ++    P+  Q   +   V L L          + + 
Sbjct: 143 GNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKE 202

Query: 189 IKNKSKLKTSMSLMMDLPAHTKGRLSTRRNVKFV--VVCSFTVNTLGKNSHILSQDCQSE 236
           ++N+   KT +   + + A  K +  + +    +  V C  TV+ L   S I+S+ C  +
Sbjct: 203 MRNEVSKKT-VPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKCSHD 256

[Close]

BLAST of CmoCh05G005150 vs. TAIR10
Match: AT5G21130.1 (AT5G21130.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-12
Identity = 67/233 (28.76%), Postives = 103/233 (44.21%), Query Frame = 1


Query: 17  GFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRSCCFRIFLPIFIVLLFI 76
           G  PGTYVI++PKDQIYR+PPPENA     HR   +S  K  +SCC R        LL I
Sbjct: 52  GPPPGTYVIKLPKDQIYRVPPPENA-----HRYEYLSRRKTNKSCCRRCLCYSLSALLII 111

Query: 77  LILALV---LPPLLTPPKPPVFKLTKFRFT--------PSTRDFHIVLNILNPNPSGFIE 136
           ++LA +      L+  P  P F ++    T        P +    I L   N      + 
Sbjct: 112 IVLAAIAFGFFYLVYQPHKPQFSVSGVSVTGINLTSSSPFSPVIRIKLRSQNVKGKLGLI 171

Query: 137 FKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKS----SSFPKELERRIKNK 196
           ++  + A + F   K+   +F   +Q  G+   +   L   S    SS  KEL    +++
Sbjct: 172 YEKGNEADVFFNGTKLGNGEFTAFKQPAGNVTVIVTVLKGSSVKLKSSSRKEL---TESQ 231

Query: 197 SKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQS 235
            K K    L +  P   K    T   +   V C  TV+ L  ++ + +++C++
Sbjct: 232 KKGKVPFGLRIKAPVKFKVGSVTTWTMTITVDCKITVDKLTASATVKTENCET 276

[Close]

BLAST of CmoCh05G005150 vs. TAIR10
Match: AT2G22180.1 (AT2G22180.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 65.9 bits (159), Expect = 3.9e-11
Identity = 61/221 (27.60%), Postives = 103/221 (46.61%), Query Frame = 1


Query: 22  TYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRSCCFRIFLPIFIVLL---FILI 81
           TYV+Q+P+DQ+Y  PPPE+A  VE     S +  K ++  C +  L  FI+L+   F+L 
Sbjct: 79  TYVVQVPRDQVYWTPPPEHAKYVE---KRSKNPEKNKKKGCSKRLLWFFIILVIFGFLLG 138

Query: 82  LALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIVLNILNPNPSGFIEFKSPSH--ASLSF 141
             +++      P  PVF + +    PS  +F + L   NP  +  + +    +   SL++
Sbjct: 139 AIILILHFAFNPTLPVFAVERLTVNPS--NFEVTLRAENPTSNMGVRYMMEKNGVVSLTY 198

Query: 142 RKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIKNKSKLKTSMSLMMDLPA 201
           +   +   KFP + Q       V + L+  + +   +        SK    + L M+L A
Sbjct: 199 KNKSLGSGKFPGLSQAASGSDKVNVKLNGSTKNAVVQ-----PRGSKQPVVLMLNMELKA 258

Query: 202 HTKGRLSTRRNVKFVVVCSFTVNTL--GKNSHILSQDCQSE 236
             +     +RN + VV C   V  L   K   I+S++C+SE
Sbjct: 259 EYEAG-PVKRNKEVVVTCDVKVKGLLDAKKVEIVSENCESE 288

[Close]

BLAST of CmoCh05G005150 vs. NCBI nr
Match: gi|659089589|ref|XP_008445591.1| (PREDICTED: uncharacterized protein LOC103488571 [Cucumis melo])

HSP 1 Score: 315.5 bits (807), Expect = 8.1e-83
Identity = 165/226 (73.01%), Postives = 193/226 (85.40%), Query Frame = 1


Query: 13  PVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRSCCFRIFLPIFIV 72
           P  P FS GTYV+QIPKDQIYRIPPPENA IV+ HRNPS+ TS RRRSCCFRIFLPIFIV
Sbjct: 16  PDPPFFSSGTYVVQIPKDQIYRIPPPENALIVQRHRNPSVVTSSRRRSCCFRIFLPIFIV 75

Query: 73  LLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIVLNILNPNPSGFIEFKSPSHA 132
           LL I+ILAL++PPL+  PKPPVFKLTKF+ TPSTR+F+I L+ILNPN +G I FKSPS  
Sbjct: 76  LLLIIILALLIPPLIALPKPPVFKLTKFKLTPSTRNFNINLDILNPNSAGSISFKSPSRV 135

Query: 133 SLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIK-NKSKLKTSMSLM 192
           SLSFRK ++A  KFPLI+Q+HGS+++VAL+L  K S+FPKEL+RR+K +K+KL TS+SL 
Sbjct: 136 SLSFRKSQLATTKFPLIRQDHGSKKNVALSLRAK-SAFPKELQRRMKSSKTKLHTSLSLK 195

Query: 193 MDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQSERQ 238
           M+L A TKGRLS RRNVKFVV CSFTVNTLGK S ILSQDC+SERQ
Sbjct: 196 MNLLAETKGRLSNRRNVKFVVTCSFTVNTLGKTSRILSQDCESERQ 240

[Close]

BLAST of CmoCh05G005150 vs. NCBI nr
Match: gi|449465892|ref|XP_004150661.1| (PREDICTED: uncharacterized protein LOC101202802 [Cucumis sativus])

HSP 1 Score: 313.9 bits (803), Expect = 2.4e-82
Identity = 172/246 (69.92%), Postives = 197/246 (80.08%), Query Frame = 1


Query: 1   MAEPERIHSNLLPVHPG--------FSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSI 60
           MAEPE       PVHP         FS GTYV+QIPKDQIYRIPPPENA IVE HRNPS+
Sbjct: 1   MAEPEPE-----PVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSV 60

Query: 61  STSKRRRSCCFRIFLPIFIVLLFILILALVLPPLLTPPKPPVFKLTKFRFTPSTRDFHIV 120
            TS RRRSCCFRIFLPIF++LL I+ILAL+LPPLLT PKPPV +L KF+ TPSTR+F I 
Sbjct: 61  VTSSRRRSCCFRIFLPIFVLLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLIN 120

Query: 121 LNILNPNPSGFIEFKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPK 180
           L+ILNPN  G I FKSPS  SLSFRK+++A  KFPLI+Q+HGS++ VAL+L  K S+FPK
Sbjct: 121 LDILNPNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAK-SAFPK 180

Query: 181 ELERRIK-NKSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQD 238
           EL+RR+K NK+KL TS+SL M+L A T GRLS RRNVKFVV CSFTVNTLGKNS ILSQD
Sbjct: 181 ELKRRMKNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQD 240

[Close]

BLAST of CmoCh05G005150 vs. NCBI nr
Match: gi|596290130|ref|XP_007226131.1| (hypothetical protein PRUPE_ppa014613mg [Prunus persica])

HSP 1 Score: 140.2 bits (352), Expect = 4.7e-30
Identity = 88/228 (38.60%), Postives = 129/228 (56.58%), Query Frame = 1


Query: 18  FSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRSCCFRIFLPIFIVLLFIL 77
           F  GTY++Q+PKDQIYR+PPPE+A IVE HR+  ++  K    CC  I    FIVLL I 
Sbjct: 49  FRSGTYIVQVPKDQIYRMPPPEHATIVERHRDSGVN-KKSCSYCCLGII--AFIVLLIIT 108

Query: 78  ILALVLPPLLTPPKPPVFKLTK--FRFTPSTRDFHIVLNILNPNPSGFIEFKSPSHASLS 137
           ++A++L  +L     P F + +   +      D+ + L   NPN    I +K    ASL 
Sbjct: 109 LVAVIL-TMLAKSGDPKFSVERVVVKGKSGRPDYDLTLEARNPNSRVAIVYKDGGGASLY 168

Query: 138 FRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIKN------KSKLKTSMS 197
           F++ K+A  K+P + Q  G  + VAL LH  +   PKE+E+ +K+      K   + S+S
Sbjct: 169 FKQKKIANGKYPSLYQGSGKSKEVALVLHGSNMKLPKEIEKSLKSSYSSTYKKGHRVSLS 228

Query: 198 LMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQSERQ 238
           L MD+PA  +      R+ KF V C  TV+TL K + +L Q+CQ+ER+
Sbjct: 229 LNMDIPARMRIGTLNSRSRKFHVTCDITVDTLAKGTKVLKQECQTERK 272

[Close]

BLAST of CmoCh05G005150 vs. NCBI nr
Match: gi|645225639|ref|XP_008219666.1| (PREDICTED: uncharacterized protein LOC103319851 [Prunus mume])

HSP 1 Score: 137.5 bits (345), Expect = 3.0e-29
Identity = 90/240 (37.50%), Postives = 128/240 (53.33%), Query Frame = 1


Query: 5   ERIHSNLLPVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRSCCFR 64
           +RI SN       F  GTY++Q+PKDQIYR+PPPE+A IVE HR+  ++  K    CC  
Sbjct: 36  QRILSNSNGSTATFRSGTYIVQVPKDQIYRMPPPEHATIVERHRDSGVN-KKSCSYCCLG 95

Query: 65  IFLPIFIVLLFILILALVLPPLLTPPKPPV-FKLTKFRFTPSTRDFHIVLNILNPNPSGF 124
           I    FIVLL I  +A++L  L     P    K    +      D+ + L   NPN    
Sbjct: 96  II--AFIVLLIITPVAVILTMLAKSGDPKFSVKRVVVKGKSGLSDYDLTLEARNPNSRVA 155

Query: 125 IEFKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIKN--- 184
           I +K    ASL F++ K+A  K+P + Q  G  + VAL LH  +   P E+E+ +K+   
Sbjct: 156 IVYKDGGGASLYFKQKKIANGKYPSLYQGSGKSKEVALVLHGSNMKLPNEIEKSLKSSHS 215

Query: 185 ---KSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQSERQ 238
              K   + S+SL MD+P   +      R+ KF V C  TV+TL K + +L Q+CQ+ER+
Sbjct: 216 STYKKGNRVSLSLNMDIPVRMRIGTLNSRSRKFHVTCDITVDTLAKGTKVLKQECQTERK 272

[Close]

BLAST of CmoCh05G005150 vs. NCBI nr
Match: gi|356510197|ref|XP_003523826.1| (PREDICTED: uncharacterized protein LOC100790243 [Glycine max])

HSP 1 Score: 136.0 bits (341), Expect = 8.8e-29
Identity = 86/238 (36.13%), Postives = 128/238 (53.78%), Query Frame = 1


Query: 5   ERIHSNLLPVHPGFSPGTYVIQIPKDQIYRIPPPENAFIVECHRNPSISTSKRRRSCCFR 64
           E+ HS      P F+PGTYV+Q+PKDQ+YR+PPPENA I E H+      +K  R C F 
Sbjct: 18  EKKHSTNKLELPDFNPGTYVVQVPKDQVYRVPPPENARIAESHKKAPPKAAKTSRCCLFC 77

Query: 65  I-FLPIFIVLLFIL--ILALVLPPLLTPPKPPVFKLTKFRF--TPSTRDFHIVLNILNPN 124
           + F  IF VLL +L  +L  +   LLT PK P F +T+F+   T     + + L + N N
Sbjct: 78  VLFFIIFFVLLILLGAVLGGLFSMLLT-PKDPQFSITRFKVVETKPHPKYDVTLEVHNLN 137

Query: 125 PSGFIEFKSPSHASLSFRKHKVAVAKFPLIQQEHGSQRHVALALHTKSSSFPKELERRIK 184
               + +K+  H SLS R+ +VA   +P   Q+   +    + L +     PKE+E  + 
Sbjct: 138 SDVGVSYKNKGHVSLSLRRQEVASGAYPSFNQDAHDRTTFGVTLTSSKVGLPKEVEESVT 197

Query: 185 N-KSKLKTSMSLMMDLPAHTKGRLSTRRNVKFVVVCSFTVNTLGKNSHILSQDCQSER 237
           N K K+  + SL +   A  K  L     +KF V C+  ++TL K + +LSQ C+++R
Sbjct: 198 NDKKKVNVTFSLAIHALARMKMGLLRSGTMKFDVTCNVKLDTLAKTTQVLSQQCETKR 254

The following BLAST results are available for this feature:

BLAST of CmoCh05G005150 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh05G005150 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LK43_CUCSA	1.6e-82	69.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G307330 PE=4 SV=1	[more]
M5Y5Z5_PRUPE	3.3e-30	38.60	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014613mg PE=4 SV=1	[more]
K7KJB0_SOYBN	6.1e-29	36.13	Uncharacterized protein OS=Glycine max GN=GLYMA_04G103700 PE=4 SV=1	[more]
B9H747_POPTR	4.0e-28	35.46	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s16920g PE=4 SV=1	[more]
A0A059BRD6_EUCGR	1.2e-27	35.71	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02438 PE=4 SV=1	[more]

BLAST of CmoCh05G005150 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27080.1	1.1e-13	26.25	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT5G21130.1	1.2e-12	28.76	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT2G22180.1	3.9e-11	27.60	hydroxyproline-rich glycoprotein family protein	[more]

BLAST of CmoCh05G005150 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089589\|ref\|XP_008445591.1\|	8.1e-83	73.01	PREDICTED: uncharacterized protein LOC103488571 [Cucumis melo]	[more]
gi\|449465892\|ref\|XP_004150661.1\|	2.4e-82	69.92	PREDICTED: uncharacterized protein LOC101202802 [Cucumis sativus]	[more]
gi\|596290130\|ref\|XP_007226131.1\|	4.7e-30	38.60	hypothetical protein PRUPE_ppa014613mg [Prunus persica]	[more]
gi\|645225639\|ref\|XP_008219666.1\|	3.0e-29	37.50	PREDICTED: uncharacterized protein LOC103319851 [Prunus mume]	[more]
gi\|356510197\|ref\|XP_003523826.1\|	8.8e-29	36.13	PREDICTED: uncharacterized protein LOC100790243 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G005150.1	CmoCh05G005150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 19..235 score: 8.7
None	No IPR available	PANTHER	PTHR31852:SF47	HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN	coord: 19..235 score: 8.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh05G005150	Cucsa.154480	Cucumber (Gy14) v1	cgycmoB0425
CmoCh05G005150	CmaCh12G001500	Cucurbita maxima (Rimu)	cmacmoB192
CmoCh05G005150	CmaCh05G004920	Cucurbita maxima (Rimu)	cmacmoB786
CmoCh05G005150	Cla022087	Watermelon (97103) v1	cmowmB746
CmoCh05G005150	Csa2G307330	Cucumber (Chinese Long) v2	cmocuB786
CmoCh05G005150	MELO3C011361	Melon (DHL92) v3.5.1	cmomeB715
CmoCh05G005150	ClCG08G011020	Watermelon (Charleston Gray)	cmowcgB713
CmoCh05G005150	CSPI02G15830	Wild cucumber (PI 183967)	cmocpiB789
CmoCh05G005150	Lsi08G009560	Bottle gourd (USVL1VR-Ls)	cmolsiB728
CmoCh05G005150	Cp4.1LG07g01330	Cucurbita pepo (Zucchini)	cmocpeB744
CmoCh05G005150	MELO3C011361.2	Melon (DHL92) v3.6.1	cmomedB812
CmoCh05G005150	CsaV3_1G022890	Cucumber (Chinese Long) v3	cmocucB0916
CmoCh05G005150	Cla97C08G153960	Watermelon (97103) v2	cmowmbB800
CmoCh05G005150	Bhi04G000616	Wax gourd	cmowgoB0937
CmoCh05G005150	CsGy2G016430	Cucumber (Gy14) v2	cgybcmoB245
CmoCh05G005150	Carg09217	Silver-seed gourd	carcmoB0196

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh05G005150	Melon (DHL92) v3.6.1	cmomedB830
CmoCh05G005150	Silver-seed gourd	carcmoB0894
CmoCh05G005150	Cucumber (Chinese Long) v3	cmocucB0942
CmoCh05G005150	Watermelon (97103) v2	cmowmbB775
CmoCh05G005150	Wax gourd	cmowgoB0954
CmoCh05G005150	Cucurbita moschata (Rifu)	cmocmoB150
CmoCh05G005150	Cucurbita moschata (Rifu)	cmocmoB452
CmoCh05G005150	Cucumber (Gy14) v1	cgycmoB0230
CmoCh05G005150	Wild cucumber (PI 183967)	cmocpiB804
CmoCh05G005150	Cucumber (Chinese Long) v2	cmocuB799
CmoCh05G005150	Melon (DHL92) v3.5.1	cmomeB733
CmoCh05G005150	Watermelon (Charleston Gray)	cmowcgB698
CmoCh05G005150	Watermelon (97103) v1	cmowmB755
CmoCh05G005150	Cucurbita pepo (Zucchini)	cmocpeB720
CmoCh05G005150	Bottle gourd (USVL1VR-Ls)	cmolsiB707
CmoCh05G005150	Cucumber (Gy14) v2	cgybcmoB829