CmoCh05G004730 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh05G004730
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUPF0420 C16orf58-like protein
LocationCmo_Chr05 : 2209491 .. 2213288 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGGCATGGCGATTGGTATGCTTCTTGCTCGTATTACCATGGGATGCCCACTGGCCATCTGGCTTTCTTTTCTATCTCTCACGTTGTTCCATATGTACGGTGAGTTATTTGCTTGAACAAACCCTCGGTTTATAGTATATGTTGACGTGACATTTAGTTTTTAAATTTCTGAATTGGTAAGAGTTCAAATTTTAGACCATCATCTCTTATGAACACATTGTTAACTTTTCTTCATCAAATTTTCTTAATAGTATTTTAGGTTCAAAATGTTTATTCGTCTACATAAAAAGAAAAAAGATGGAAAAATATATATTTATGTAGTCATGGTAGATTTCAAACATGCCTTGGTAGGTCTGTCACAATTTTGTAAAATTCTGCTTGTGAATTTGTGCAGCAAATTACAAGGCTGTTTGCTGCCTTTCCTTGACTTCACTCAACCCTCAGAGGTGTTCAATTGCTTTGCAGCATTTTATTCAGACAGGCCAAGGTGATGCCCGATGTCTTTATTCTTTCCTGTTGTTACTGATCATGATTCATTTCCTGGATGGTTCAGGGCTATTTGTACGTATGTACACTGTAAATTCCACTCACACGCGTTAATATGTGATTTATGCGACAAAACTATTTTTAAATCTACCTCTTTCTGCGATAAATAAAAATTGCTGCACTCTAATCTCTTTGTTTAAATAAAAGTTACCATGCGACTGAACCTGCATTCAGTTCTCTCTCCTCAACAGGTTTCTAAGATGGAGCATGTTTTACCCACATGGGTTTCTTCATGGAGTTTAAGGAGTATTAAGTTAATCCATACACGTGTAAGATTAGGAGAGAGGATCTCTTCACTTCATCACTCAGAAATGTGAGTTTTTACATACCAGCTTTTTGACTTGCTTGATCTTTTTTTTTTTCTTTTCTTATTATTTAGATAAGAAGAAGACATCCATTTGACAAATAAATGACAAAGAAGCAGGTTAAGCCAAAGTGTTATAAAAAAGGGTTTCAAATGGACAAGTTTTGGATGCAATAATTACAAGACTCAATATTGAAAGAACTCCCAAGATTTTAAAATGCTGGCATATGTGGAAGCGAAAATAGAAGTGGTTGTATATGTACTATTGTTTACATTAAAAAATAAATAAATAAACTAGCAACACGATACTCCTTAAATAGATCAATCAAATATGGTTTATCATTAGGATTTAGGCAATATAGTACGTCCGTTGCAAGTGTAAAGAAATTTACTTTTATTTAAAGAACACATGCGATTGGAAGACTGAAGTTTGTCTGGTTATCTGTCATAGTTTTTCTTTCCACAGTTCATAAAACTGATATATAGCTAATAACATTATTTTGGTATAGGAAGGAGCTGTTGCAATTGGCAGGTGCCAATAGTAACAAAGGTTGGAGTACTTTTAAATATTTTCCGAAAGATAGGTTTGAGCTGTATTTTATAACTCCATCTGATCATATGTTATTCGTTTTCCAGTGAAGTACCTTCTAATGGAGAGGAAGTCCATTATCTGTGTTATTGTGCGAAAAGATGCAACTGCTAATGACATCTTCCAATCATTCTTTCATGCACTTGTTACGGCTTATGTTCCTGATCAGGCGTCTAGGCATTTGGAAAGCCTGTCGTGGATGGACAAACATTATGAAGATTTTATTCAAAAGGTTTTTTTTTTTTTTTTTTCTCTTTAATGTTTCTGAACTTCATTAAGTTGCAAATTTTCTCTTCCGTTCTTCTTTTCTTAGCCTTTTCTTTTTGGTTATAAAAAATGATAAATTTTCATTAATTTTTTGAGAAAATGATACGAAAAACTTCCCCAAAAGTAACTCACAAAAAACCACTTCAACAAGACTGCAAGAATTAATTAAAGAACGGTTGAAATTTAGCAAACGGTCCAAATCTAATCTTAATCTCGTCTCTTCTCGCTATAATTTATAAGGTGTCCTTTCATCGAACTCCCAGTAGGCAGCTTTTTGTTTTACTCCCACAACATTTGCCTTTTCCCGGTGGTTCAACTGTTCAACTGTTCTCCCAATTAGCGGAGTATATACATAAAGCCTGTTTAAATTTAAACCTTGAGCCTTTGGCTGAAGGGATGGAGAAAAAGGAGTTGATCCTTTTGTTAGGAATCACGACCCTCCACAATAATATGATATTGTCCACTTTAAACATAAGCTCTCATGACTTTGCTTTAGGCTTCTCCAAAAGGCCTCGTACCAATGGAGATGTATTTCTCACTTATAAACTCATGATCTAGCTGATGTGAGACCCTTCTTCCAACAATCCTCACTCCTTTTAATCATTATTCACATATAGAGGACACTAGTCTGGAAGCAAAACCATCTAGAGCAGAACCATTCTCAAATGGTACCTACATTTGATCCTACCATCCATAGCCATAGCCTAAAAAAGAGAGAAAGTGATAGAGAGAGAATGTCTGCCCGTTCAGAATTCCAGATACATGGATGCATGAATTGCATCGTAGGAAGATATTACTTGCCAACACGTTACGTATGGGAAAAATCATGCTTTTCTTTGAAGCTTGCTATAGTTATCTGTAAATTGGAATAGAGTTGGAACTATATGCCTTGGACTTCTGTACATTCTTTCATATAGAGTACAATTCTCAGCCACATGTGATGATATTTTCATTACTTTACATTCGGTATATTTATAATTTTCATTGCATTTACACCATTCAATTACCTTTTAGCTGAAGCTATCGGGTTGGAAGACAGATCGTCTACTTTCTCCGTCAGTTTGTTGGAGAGCCAACTGGGTCTGCAGTCCCAGAGATGAGAAAATTGACTAAACCTCAGTGGTCACTAACCATAAAAGAGCAGCACAAGGAGGTACCCACTAATATAAACTGTTTCAAATTCAGCCACACTCTGTGGCATATTCACAATATTGGTTGATACTCCCTGCTTGTGAATGGTGCAAATCTGAAAAGTATTGTCAATATGCTGTTTATGGCCTTGATAGTTTTTAAACAGCACCATGCAAATCTGCTTGTGACCTTATAGCTTTTAATGAACCATATAAACCGCACTCATATGATTATGCTTTCTGATATTCTGCCACTGGATTCATTCTGACTTTATAGTTTATGATGAACCTTATAAACAGCACTCATTTGATTATGCTTTCTGATATTCTGCCACTGGATTCATTCTGACCTTATAGTTTTTAATCAACCTTATGAACAACACTAATTTGATTATGATATTTTGCCACTGGATTCATTCTGACCTTATAGTTTATAATGAACCTTATGAACCGCACTCATTTGATTATGCTTTCTGATATTCTGCCACTGGATTCATTTGACCTTATAGTCTTTAATCAACCCTATGAACTACACTCATTTGATTATGATATTCTGCCACTGGATTCATTCTGACCTTATAGTGTATAGTGAACCTTATGAACAACACTCATTTGATTATGCTTTCTGATATTCTGCCACCGGTTGTTTCTTTTTTATAAAACTTGGCTGCAAACTTTTGATGAGTATGCATTAATTCTTCTTGCAATTATGCATTTAAGCTTGCAGTTAAATATAAAACAGGTTAGGAGCTCTCTCTAAGAAGATAAACTCGTTCAAAGTGCTGGGGGCAGTCTCAAGAGCTGATCAATATTCCTACAGAAAATCACGCTTACATTTATGCTCAATCCTGTAGTATTAGAAAACCATGACCAATTTTTATATTCAAGAGTGGCTATCTTTTCCATTTTTACTCATTTCTTTTCGAGTCTGCAGCTTGAAACGGACCGATATTGTTGA

mRNA sequence

ATGGTAGGCATGGCGATTGGTATGCTTCTTGCTCGTATTACCATGGGATGCCCACTGGCCATCTGGCTTTCTTTTCTATCTCTCACGTTGTTCCATATGTACGCAAATTACAAGGCTGTTTGCTGCCTTTCCTTGACTTCACTCAACCCTCAGAGGTGTTCAATTGCTTTGCAGCATTTTATTCAGACAGGCCAAGTGAAGTACCTTCTAATGGAGAGGAAGTCCATTATCTGTGTTATTGTGCGAAAAGATGCAACTGCTAATGACATCTTCCAATCATTCTTTCATGCACTTGTTACGGCTTATGTTCCTGATCAGGCGTCTAGGCATTTGGAAAGCCTGTCGTGGATGGACAAACATTATGAAGATTTTATTCAAAAGTTTGTTGGAGAGCCAACTGGGTCTGCAGTCCCAGAGATGAGAAAATTGACTAAACCTCAGTGGTCACTAACCATAAAAGAGCAGCACAAGGAGCTTGAAACGGACCGATATTGTTGA

Coding sequence (CDS)

ATGGTAGGCATGGCGATTGGTATGCTTCTTGCTCGTATTACCATGGGATGCCCACTGGCCATCTGGCTTTCTTTTCTATCTCTCACGTTGTTCCATATGTACGCAAATTACAAGGCTGTTTGCTGCCTTTCCTTGACTTCACTCAACCCTCAGAGGTGTTCAATTGCTTTGCAGCATTTTATTCAGACAGGCCAAGTGAAGTACCTTCTAATGGAGAGGAAGTCCATTATCTGTGTTATTGTGCGAAAAGATGCAACTGCTAATGACATCTTCCAATCATTCTTTCATGCACTTGTTACGGCTTATGTTCCTGATCAGGCGTCTAGGCATTTGGAAAGCCTGTCGTGGATGGACAAACATTATGAAGATTTTATTCAAAAGTTTGTTGGAGAGCCAACTGGGTCTGCAGTCCCAGAGATGAGAAAATTGACTAAACCTCAGTGGTCACTAACCATAAAAGAGCAGCACAAGGAGCTTGAAACGGACCGATATTGTTGA
Homology
[Close]
BLAST of CmoCh05G004730 vs. Swiss-Prot
Match: RUS3_ARATH (Protein root UVB sensitive 3 OS=Arabidopsis thaliana GN=RUS3 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 9.8e-19
Identity = 49/66 (74.24%), Postives = 56/66 (84.85%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GM++GMLLAR T G P+AIWLSFLSLT+FHMYANY+AV CL L SLN +R SI L HF
Sbjct: 220 MMGMSLGMLLARFTSGNPMAIWLSFLSLTVFHMYANYRAVRCLVLNSLNFERSSILLTHF 279

Query: 61  IQTGQV 67
           IQTGQV
Sbjct: 280 IQTGQV 285

[Close]
BLAST of CmoCh05G004730 vs. TrEMBL
Match: Q10Q12_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g11500 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.6e-26
Identity = 63/128 (49.22%), Postives = 88/128 (68.75%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GM +GMLLA +T G  L +W+SFLSLT+FHMYANYKAV  LSLT+LN +R SI LQ+F
Sbjct: 338 MLGMGLGMLLAHVTRGHALGVWVSFLSLTIFHMYANYKAVQSLSLTTLNYERSSILLQYF 397

Query: 61  IQTGQVKYLLMERKSIICVIVRKDATANDIFQSFFHALVTAYVPDQA-SRHLESLSWMDK 120
           +  G+  Y L++++  + + + K A A DI  SF H LV A++  ++ S H E+  W+D+
Sbjct: 398 MDNGEENYFLLDKEGSVHIFIHKQAAATDILMSFIHGLVLAHLMQKSKSGHAEARQWIDE 457

Query: 121 HYEDFIQK 128
            Y  FI K
Sbjct: 458 KYNTFISK 465

[Close]
BLAST of CmoCh05G004730 vs. TrEMBL
Match: A0A0E0NRI5_ORYRU (Uncharacterized protein OS=Oryza rufipogon PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.6e-26
Identity = 63/128 (49.22%), Postives = 88/128 (68.75%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GM +GMLLA +T G  L +W+SFLSLT+FHMYANYKAV  LSLT+LN +R SI LQ+F
Sbjct: 338 MLGMGLGMLLAHVTRGHALGVWVSFLSLTIFHMYANYKAVQSLSLTTLNYERSSILLQYF 397

Query: 61  IQTGQVKYLLMERKSIICVIVRKDATANDIFQSFFHALVTAYVPDQA-SRHLESLSWMDK 120
           +  G+  Y L++++  + + + K A A DI  SF H LV A++  ++ S H E+  W+D+
Sbjct: 398 MDNGEENYFLLDKEGSVHIFIHKQAAATDILMSFIHGLVLAHLMQKSKSGHAEARQWIDE 457

Query: 121 HYEDFIQK 128
            Y  FI K
Sbjct: 458 KYNTFISK 465

[Close]
BLAST of CmoCh05G004730 vs. TrEMBL
Match: A0A0E0GIY7_ORYNI (Uncharacterized protein OS=Oryza nivara PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.6e-26
Identity = 63/128 (49.22%), Postives = 88/128 (68.75%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GM +GMLLA +T G  L +W+SFLSLT+FHMYANYKAV  LSLT+LN +R SI LQ+F
Sbjct: 338 MLGMGLGMLLAHVTRGHALGVWVSFLSLTIFHMYANYKAVQSLSLTTLNYERSSIMLQYF 397

Query: 61  IQTGQVKYLLMERKSIICVIVRKDATANDIFQSFFHALVTAYVPDQA-SRHLESLSWMDK 120
           +  G+  Y L++++  + + + K A A DI  SF H LV A++  ++ S H E+  W+D+
Sbjct: 398 MDNGEENYFLLDKEGSVHIFIHKQAAATDILMSFIHGLVLAHLMQKSKSGHAEARQWIDE 457

Query: 121 HYEDFIQK 128
            Y  FI K
Sbjct: 458 KYNTFISK 465

[Close]
BLAST of CmoCh05G004730 vs. TrEMBL
Match: A0A0A0KIQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G366490 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.4e-26
Identity = 61/66 (92.42%), Postives = 65/66 (98.48%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GMAIGMLLARITMGCPLAIWLSFLSLT+FHMYANYKAVCCLSLTSLNPQRCSIALQH+
Sbjct: 218 MIGMAIGMLLARITMGCPLAIWLSFLSLTMFHMYANYKAVCCLSLTSLNPQRCSIALQHY 277

Query: 61  IQTGQV 67
           IQT +V
Sbjct: 278 IQTAEV 283

[Close]
BLAST of CmoCh05G004730 vs. TrEMBL
Match: A0A0E0CX55_9ORYZ (Uncharacterized protein OS=Oryza meridionalis PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.8e-26
Identity = 63/128 (49.22%), Postives = 87/128 (67.97%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GM +GMLLA +T G  L +W+SFLSLT+FHMYANYKAV  LSLT+LN +R SI LQ+F
Sbjct: 554 MLGMGLGMLLAHVTRGHALGVWVSFLSLTIFHMYANYKAVQSLSLTTLNYERSSILLQYF 613

Query: 61  IQTGQVKYLLMERKSIICVIVRKDATANDIFQSFFHALVTAYVPDQA-SRHLESLSWMDK 120
           +  G+  Y L+++   + + + K A A DI  SF H LV A++  ++ S H E+  W+D+
Sbjct: 614 MDNGEENYFLLDKGGSVHIFIHKQAAATDILMSFIHGLVLAHLMQKSKSGHAEARQWIDE 673

Query: 121 HYEDFIQK 128
            Y  FI K
Sbjct: 674 KYNTFISK 681

[Close]
BLAST of CmoCh05G004730 vs. TAIR10
Match: AT1G13770.1 (AT1G13770.1 Protein of unknown function, DUF647)

HSP 1 Score: 94.7 bits (234), Expect = 5.5e-20
Identity = 49/66 (74.24%), Postives = 56/66 (84.85%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GM++GMLLAR T G P+AIWLSFLSLT+FHMYANY+AV CL L SLN +R SI L HF
Sbjct: 220 MMGMSLGMLLARFTSGNPMAIWLSFLSLTVFHMYANYRAVRCLVLNSLNFERSSILLTHF 279

Query: 61  IQTGQV 67
           IQTGQV
Sbjct: 280 IQTGQV 285

[Close]
BLAST of CmoCh05G004730 vs. NCBI nr
Match: gi|659089334|ref|XP_008445451.1| (PREDICTED: UPF0420 protein C16orf58 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 127.9 bits (320), Expect = 1.7e-26
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQH+
Sbjct: 132 MIGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHY 191

Query: 61  IQTGQV 67
           IQT QV
Sbjct: 192 IQTAQV 197

[Close]
BLAST of CmoCh05G004730 vs. NCBI nr
Match: gi|659089332|ref|XP_008445450.1| (PREDICTED: UPF0420 protein C16orf58 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 127.9 bits (320), Expect = 1.7e-26
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQH+
Sbjct: 218 MIGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHY 277

Query: 61  IQTGQV 67
           IQT QV
Sbjct: 278 IQTAQV 283

[Close]
BLAST of CmoCh05G004730 vs. NCBI nr
Match: gi|108706828|gb|ABF94623.1| (expressed protein [Oryza sativa Japonica Group])

HSP 1 Score: 126.7 bits (317), Expect = 3.7e-26
Identity = 63/128 (49.22%), Postives = 88/128 (68.75%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GM +GMLLA +T G  L +W+SFLSLT+FHMYANYKAV  LSLT+LN +R SI LQ+F
Sbjct: 338 MLGMGLGMLLAHVTRGHALGVWVSFLSLTIFHMYANYKAVQSLSLTTLNYERSSILLQYF 397

Query: 61  IQTGQVKYLLMERKSIICVIVRKDATANDIFQSFFHALVTAYVPDQA-SRHLESLSWMDK 120
           +  G+  Y L++++  + + + K A A DI  SF H LV A++  ++ S H E+  W+D+
Sbjct: 398 MDNGEENYFLLDKEGSVHIFIHKQAAATDILMSFIHGLVLAHLMQKSKSGHAEARQWIDE 457

Query: 121 HYEDFIQK 128
            Y  FI K
Sbjct: 458 KYNTFISK 465

[Close]
BLAST of CmoCh05G004730 vs. NCBI nr
Match: gi|778715452|ref|XP_011657403.1| (PREDICTED: protein root UVB sensitive 3 [Cucumis sativus])

HSP 1 Score: 125.9 bits (315), Expect = 6.3e-26
Identity = 61/66 (92.42%), Postives = 65/66 (98.48%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GMAIGMLLARITMGCPLAIWLSFLSLT+FHMYANYKAVCCLSLTSLNPQRCSIALQH+
Sbjct: 218 MIGMAIGMLLARITMGCPLAIWLSFLSLTMFHMYANYKAVCCLSLTSLNPQRCSIALQHY 277

Query: 61  IQTGQV 67
           IQT +V
Sbjct: 278 IQTAEV 283

[Close]
BLAST of CmoCh05G004730 vs. NCBI nr
Match: gi|658064586|ref|XP_008368237.1| (PREDICTED: LOW QUALITY PROTEIN: UPF0420 protein C16orf58 homolog [Malus domestica])

HSP 1 Score: 109.8 bits (273), Expect = 4.7e-21
Identity = 54/66 (81.82%), Postives = 61/66 (92.42%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           MVGMA+GMLLAR+TMG PLAIW SFLSLT+FHMYANYKAV CL+L SLNP+RCSI LQHF
Sbjct: 216 MVGMALGMLLARVTMGHPLAIWXSFLSLTVFHMYANYKAVRCLALNSLNPERCSIVLQHF 275

Query: 61  IQTGQV 67
           ++TGQV
Sbjct: 276 MKTGQV 281

The following BLAST results are available for this feature:
BLAST of CmoCh05G004730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RUS3_ARATH9.8e-1974.24Protein root UVB sensitive 3 OS=Arabidopsis thaliana GN=RUS3 PE=2 SV=1[more]
BLAST of CmoCh05G004730 vs. TrEMBL
Match NameE-valueIdentityDescription
Q10Q12_ORYSJ2.6e-2649.22Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g11500 PE=4 SV=1[more]
A0A0E0NRI5_ORYRU2.6e-2649.22Uncharacterized protein OS=Oryza rufipogon PE=4 SV=1[more]
A0A0E0GIY7_ORYNI2.6e-2649.22Uncharacterized protein OS=Oryza nivara PE=4 SV=1[more]
A0A0A0KIQ8_CUCSA4.4e-2692.42Uncharacterized protein OS=Cucumis sativus GN=Csa_6G366490 PE=4 SV=1[more]
A0A0E0CX55_9ORYZ5.8e-2649.22Uncharacterized protein OS=Oryza meridionalis PE=3 SV=1[more]
BLAST of CmoCh05G004730 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G13770.15.5e-2074.24 Protein of unknown function, DUF647[more]
BLAST of CmoCh05G004730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659089334|ref|XP_008445451.1|1.7e-2695.45PREDICTED: UPF0420 protein C16orf58 homolog isoform X2 [Cucumis melo][more]
gi|659089332|ref|XP_008445450.1|1.7e-2695.45PREDICTED: UPF0420 protein C16orf58 homolog isoform X1 [Cucumis melo][more]
gi|108706828|gb|ABF94623.1|3.7e-2649.22expressed protein [Oryza sativa Japonica Group][more]
gi|778715452|ref|XP_011657403.1|6.3e-2692.42PREDICTED: protein root UVB sensitive 3 [Cucumis sativus][more]
gi|658064586|ref|XP_008368237.1|4.7e-2181.82PREDICTED: LOW QUALITY PROTEIN: UPF0420 protein C16orf58 homolog [Malus domestic... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006968RUS_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G004730.1CmoCh05G004730.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006968Root UVB sensitive familyPANTHERPTHR12770FAMILY NOT NAMEDcoord: 1..127
score: 7.6
IPR006968Root UVB sensitive familyPFAMPF04884DUF647coord: 1..63
score: 1.9
NoneNo IPR availablePANTHERPTHR12770:SF22UPF0420 PROTEIN C16ORF58coord: 1..127
score: 7.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh05G004730Cla97C08G153270Watermelon (97103) v2cmowmbB800
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh05G004730Cucumber (Chinese Long) v2cmocuB796
CmoCh05G004730Melon (DHL92) v3.5.1cmomeB715
CmoCh05G004730Watermelon (Charleston Gray)cmowcgB713
CmoCh05G004730Watermelon (97103) v1cmowmB746
CmoCh05G004730Cucurbita pepo (Zucchini)cmocpeB720
CmoCh05G004730Cucurbita pepo (Zucchini)cmocpeB744
CmoCh05G004730Bottle gourd (USVL1VR-Ls)cmolsiB728
CmoCh05G004730Cucumber (Gy14) v2cgybcmoB825
CmoCh05G004730Melon (DHL92) v3.6.1cmomedB812
CmoCh05G004730Silver-seed gourdcarcmoB0196
CmoCh05G004730Silver-seed gourdcarcmoB0894
CmoCh05G004730Cucumber (Chinese Long) v3cmocucB0937
CmoCh05G004730Cucumber (Chinese Long) v3cmocucB0940
CmoCh05G004730Wax gourdcmowgoB0941
CmoCh05G004730Cucurbita moschata (Rifu)cmocmoB150
CmoCh05G004730Cucumber (Gy14) v1cgycmoB0907
CmoCh05G004730Cucurbita maxima (Rimu)cmacmoB192
CmoCh05G004730Cucurbita maxima (Rimu)cmacmoB786
CmoCh05G004730Wild cucumber (PI 183967)cmocpiB800