CmoCh05G004730 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh05G004730
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUPF0420 C16orf58-like protein
LocationCmo_Chr05 : 2209491 .. 2213288 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGGCATGGCGATTGGTATGCTTCTTGCTCGTATTACCATGGGATGCCCACTGGCCATCTGGCTTTCTTTTCTATCTCTCACGTTGTTCCATATGTACGGTGAGTTATTTGCTTGAACAAACCCTCGGTTTATAGTATATGTTGACGTGACATTTAGTTTTTAAATTTCTGAATTGGTAAGAGTTCAAATTTTAGACCATCATCTCTTATGAACACATTGTTAACTTTTCTTCATCAAATTTTCTTAATAGTATTTTAGGTTCAAAATGTTTATTCGTCTACATAAAAAGAAAAAAGATGGAAAAATATATATTTATGTAGTCATGGTAGATTTCAAACATGCCTTGGTAGGTCTGTCACAATTTTGTAAAATTCTGCTTGTGAATTTGTGCAGCAAATTACAAGGCTGTTTGCTGCCTTTCCTTGACTTCACTCAACCCTCAGAGGTGTTCAATTGCTTTGCAGCATTTTATTCAGACAGGCCAAGGTGATGCCCGATGTCTTTATTCTTTCCTGTTGTTACTGATCATGATTCATTTCCTGGATGGTTCAGGGCTATTTGTACGTATGTACACTGTAAATTCCACTCACACGCGTTAATATGTGATTTATGCGACAAAACTATTTTTAAATCTACCTCTTTCTGCGATAAATAAAAATTGCTGCACTCTAATCTCTTTGTTTAAATAAAAGTTACCATGCGACTGAACCTGCATTCAGTTCTCTCTCCTCAACAGGTTTCTAAGATGGAGCATGTTTTACCCACATGGGTTTCTTCATGGAGTTTAAGGAGTATTAAGTTAATCCATACACGTGTAAGATTAGGAGAGAGGATCTCTTCACTTCATCACTCAGAAATGTGAGTTTTTACATACCAGCTTTTTGACTTGCTTGATCTTTTTTTTTTTCTTTTCTTATTATTTAGATAAGAAGAAGACATCCATTTGACAAATAAATGACAAAGAAGCAGGTTAAGCCAAAGTGTTATAAAAAAGGGTTTCAAATGGACAAGTTTTGGATGCAATAATTACAAGACTCAATATTGAAAGAACTCCCAAGATTTTAAAATGCTGGCATATGTGGAAGCGAAAATAGAAGTGGTTGTATATGTACTATTGTTTACATTAAAAAATAAATAAATAAACTAGCAACACGATACTCCTTAAATAGATCAATCAAATATGGTTTATCATTAGGATTTAGGCAATATAGTACGTCCGTTGCAAGTGTAAAGAAATTTACTTTTATTTAAAGAACACATGCGATTGGAAGACTGAAGTTTGTCTGGTTATCTGTCATAGTTTTTCTTTCCACAGTTCATAAAACTGATATATAGCTAATAACATTATTTTGGTATAGGAAGGAGCTGTTGCAATTGGCAGGTGCCAATAGTAACAAAGGTTGGAGTACTTTTAAATATTTTCCGAAAGATAGGTTTGAGCTGTATTTTATAACTCCATCTGATCATATGTTATTCGTTTTCCAGTGAAGTACCTTCTAATGGAGAGGAAGTCCATTATCTGTGTTATTGTGCGAAAAGATGCAACTGCTAATGACATCTTCCAATCATTCTTTCATGCACTTGTTACGGCTTATGTTCCTGATCAGGCGTCTAGGCATTTGGAAAGCCTGTCGTGGATGGACAAACATTATGAAGATTTTATTCAAAAGGTTTTTTTTTTTTTTTTTTCTCTTTAATGTTTCTGAACTTCATTAAGTTGCAAATTTTCTCTTCCGTTCTTCTTTTCTTAGCCTTTTCTTTTTGGTTATAAAAAATGATAAATTTTCATTAATTTTTTGAGAAAATGATACGAAAAACTTCCCCAAAAGTAACTCACAAAAAACCACTTCAACAAGACTGCAAGAATTAATTAAAGAACGGTTGAAATTTAGCAAACGGTCCAAATCTAATCTTAATCTCGTCTCTTCTCGCTATAATTTATAAGGTGTCCTTTCATCGAACTCCCAGTAGGCAGCTTTTTGTTTTACTCCCACAACATTTGCCTTTTCCCGGTGGTTCAACTGTTCAACTGTTCTCCCAATTAGCGGAGTATATACATAAAGCCTGTTTAAATTTAAACCTTGAGCCTTTGGCTGAAGGGATGGAGAAAAAGGAGTTGATCCTTTTGTTAGGAATCACGACCCTCCACAATAATATGATATTGTCCACTTTAAACATAAGCTCTCATGACTTTGCTTTAGGCTTCTCCAAAAGGCCTCGTACCAATGGAGATGTATTTCTCACTTATAAACTCATGATCTAGCTGATGTGAGACCCTTCTTCCAACAATCCTCACTCCTTTTAATCATTATTCACATATAGAGGACACTAGTCTGGAAGCAAAACCATCTAGAGCAGAACCATTCTCAAATGGTACCTACATTTGATCCTACCATCCATAGCCATAGCCTAAAAAAGAGAGAAAGTGATAGAGAGAGAATGTCTGCCCGTTCAGAATTCCAGATACATGGATGCATGAATTGCATCGTAGGAAGATATTACTTGCCAACACGTTACGTATGGGAAAAATCATGCTTTTCTTTGAAGCTTGCTATAGTTATCTGTAAATTGGAATAGAGTTGGAACTATATGCCTTGGACTTCTGTACATTCTTTCATATAGAGTACAATTCTCAGCCACATGTGATGATATTTTCATTACTTTACATTCGGTATATTTATAATTTTCATTGCATTTACACCATTCAATTACCTTTTAGCTGAAGCTATCGGGTTGGAAGACAGATCGTCTACTTTCTCCGTCAGTTTGTTGGAGAGCCAACTGGGTCTGCAGTCCCAGAGATGAGAAAATTGACTAAACCTCAGTGGTCACTAACCATAAAAGAGCAGCACAAGGAGGTACCCACTAATATAAACTGTTTCAAATTCAGCCACACTCTGTGGCATATTCACAATATTGGTTGATACTCCCTGCTTGTGAATGGTGCAAATCTGAAAAGTATTGTCAATATGCTGTTTATGGCCTTGATAGTTTTTAAACAGCACCATGCAAATCTGCTTGTGACCTTATAGCTTTTAATGAACCATATAAACCGCACTCATATGATTATGCTTTCTGATATTCTGCCACTGGATTCATTCTGACTTTATAGTTTATGATGAACCTTATAAACAGCACTCATTTGATTATGCTTTCTGATATTCTGCCACTGGATTCATTCTGACCTTATAGTTTTTAATCAACCTTATGAACAACACTAATTTGATTATGATATTTTGCCACTGGATTCATTCTGACCTTATAGTTTATAATGAACCTTATGAACCGCACTCATTTGATTATGCTTTCTGATATTCTGCCACTGGATTCATTTGACCTTATAGTCTTTAATCAACCCTATGAACTACACTCATTTGATTATGATATTCTGCCACTGGATTCATTCTGACCTTATAGTGTATAGTGAACCTTATGAACAACACTCATTTGATTATGCTTTCTGATATTCTGCCACCGGTTGTTTCTTTTTTATAAAACTTGGCTGCAAACTTTTGATGAGTATGCATTAATTCTTCTTGCAATTATGCATTTAAGCTTGCAGTTAAATATAAAACAGGTTAGGAGCTCTCTCTAAGAAGATAAACTCGTTCAAAGTGCTGGGGGCAGTCTCAAGAGCTGATCAATATTCCTACAGAAAATCACGCTTACATTTATGCTCAATCCTGTAGTATTAGAAAACCATGACCAATTTTTATATTCAAGAGTGGCTATCTTTTCCATTTTTACTCATTTCTTTTCGAGTCTGCAGCTTGAAACGGACCGATATTGTTGA

mRNA sequence

ATGGTAGGCATGGCGATTGGTATGCTTCTTGCTCGTATTACCATGGGATGCCCACTGGCCATCTGGCTTTCTTTTCTATCTCTCACGTTGTTCCATATGTACGCAAATTACAAGGCTGTTTGCTGCCTTTCCTTGACTTCACTCAACCCTCAGAGGTGTTCAATTGCTTTGCAGCATTTTATTCAGACAGGCCAAGTGAAGTACCTTCTAATGGAGAGGAAGTCCATTATCTGTGTTATTGTGCGAAAAGATGCAACTGCTAATGACATCTTCCAATCATTCTTTCATGCACTTGTTACGGCTTATGTTCCTGATCAGGCGTCTAGGCATTTGGAAAGCCTGTCGTGGATGGACAAACATTATGAAGATTTTATTCAAAAGTTTGTTGGAGAGCCAACTGGGTCTGCAGTCCCAGAGATGAGAAAATTGACTAAACCTCAGTGGTCACTAACCATAAAAGAGCAGCACAAGGAGCTTGAAACGGACCGATATTGTTGA

Coding sequence (CDS)

ATGGTAGGCATGGCGATTGGTATGCTTCTTGCTCGTATTACCATGGGATGCCCACTGGCCATCTGGCTTTCTTTTCTATCTCTCACGTTGTTCCATATGTACGCAAATTACAAGGCTGTTTGCTGCCTTTCCTTGACTTCACTCAACCCTCAGAGGTGTTCAATTGCTTTGCAGCATTTTATTCAGACAGGCCAAGTGAAGTACCTTCTAATGGAGAGGAAGTCCATTATCTGTGTTATTGTGCGAAAAGATGCAACTGCTAATGACATCTTCCAATCATTCTTTCATGCACTTGTTACGGCTTATGTTCCTGATCAGGCGTCTAGGCATTTGGAAAGCCTGTCGTGGATGGACAAACATTATGAAGATTTTATTCAAAAGTTTGTTGGAGAGCCAACTGGGTCTGCAGTCCCAGAGATGAGAAAATTGACTAAACCTCAGTGGTCACTAACCATAAAAGAGCAGCACAAGGAGCTTGAAACGGACCGATATTGTTGA
Homology
[Close]
BLAST of CmoCh05G004730 vs. Swiss-Prot
Match: RUS3_ARATH (Protein root UVB sensitive 3 OS=Arabidopsis thaliana GN=RUS3 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 9.8e-19
Identity = 49/66 (74.24%), Postives = 56/66 (84.85%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GM++GMLLAR T G P+AIWLSFLSLT+FHMYANY+AV CL L SLN +R SI L HF
Sbjct: 220 MMGMSLGMLLARFTSGNPMAIWLSFLSLTVFHMYANYRAVRCLVLNSLNFERSSILLTHF 279

Query: 61  IQTGQV 67
           IQTGQV
Sbjct: 280 IQTGQV 285

[Close]
BLAST of CmoCh05G004730 vs. TrEMBL
Match: Q10Q12_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g11500 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.6e-26
Identity = 63/128 (49.22%), Postives = 88/128 (68.75%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GM +GMLLA +T G  L +W+SFLSLT+FHMYANYKAV  LSLT+LN +R SI LQ+F
Sbjct: 338 MLGMGLGMLLAHVTRGHALGVWVSFLSLTIFHMYANYKAVQSLSLTTLNYERSSILLQYF 397

Query: 61  IQTGQVKYLLMERKSIICVIVRKDATANDIFQSFFHALVTAYVPDQA-SRHLESLSWMDK 120
           +  G+  Y L++++  + + + K A A DI  SF H LV A++  ++ S H E+  W+D+
Sbjct: 398 MDNGEENYFLLDKEGSVHIFIHKQAAATDILMSFIHGLVLAHLMQKSKSGHAEARQWIDE 457

Query: 121 HYEDFIQK 128
            Y  FI K
Sbjct: 458 KYNTFISK 465

[Close]
BLAST of CmoCh05G004730 vs. TrEMBL
Match: A0A0E0NRI5_ORYRU (Uncharacterized protein OS=Oryza rufipogon PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.6e-26
Identity = 63/128 (49.22%), Postives = 88/128 (68.75%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GM +GMLLA +T G  L +W+SFLSLT+FHMYANYKAV  LSLT+LN +R SI LQ+F
Sbjct: 338 MLGMGLGMLLAHVTRGHALGVWVSFLSLTIFHMYANYKAVQSLSLTTLNYERSSILLQYF 397

Query: 61  IQTGQVKYLLMERKSIICVIVRKDATANDIFQSFFHALVTAYVPDQA-SRHLESLSWMDK 120
           +  G+  Y L++++  + + + K A A DI  SF H LV A++  ++ S H E+  W+D+
Sbjct: 398 MDNGEENYFLLDKEGSVHIFIHKQAAATDILMSFIHGLVLAHLMQKSKSGHAEARQWIDE 457

Query: 121 HYEDFIQK 128
            Y  FI K
Sbjct: 458 KYNTFISK 465

[Close]
BLAST of CmoCh05G004730 vs. TrEMBL
Match: A0A0E0GIY7_ORYNI (Uncharacterized protein OS=Oryza nivara PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.6e-26
Identity = 63/128 (49.22%), Postives = 88/128 (68.75%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GM +GMLLA +T G  L +W+SFLSLT+FHMYANYKAV  LSLT+LN +R SI LQ+F
Sbjct: 338 MLGMGLGMLLAHVTRGHALGVWVSFLSLTIFHMYANYKAVQSLSLTTLNYERSSIMLQYF 397

Query: 61  IQTGQVKYLLMERKSIICVIVRKDATANDIFQSFFHALVTAYVPDQA-SRHLESLSWMDK 120
           +  G+  Y L++++  + + + K A A DI  SF H LV A++  ++ S H E+  W+D+
Sbjct: 398 MDNGEENYFLLDKEGSVHIFIHKQAAATDILMSFIHGLVLAHLMQKSKSGHAEARQWIDE 457

Query: 121 HYEDFIQK 128
            Y  FI K
Sbjct: 458 KYNTFISK 465

[Close]
BLAST of CmoCh05G004730 vs. TrEMBL
Match: A0A0A0KIQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G366490 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.4e-26
Identity = 61/66 (92.42%), Postives = 65/66 (98.48%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GMAIGMLLARITMGCPLAIWLSFLSLT+FHMYANYKAVCCLSLTSLNPQRCSIALQH+
Sbjct: 218 MIGMAIGMLLARITMGCPLAIWLSFLSLTMFHMYANYKAVCCLSLTSLNPQRCSIALQHY 277

Query: 61  IQTGQV 67
           IQT +V
Sbjct: 278 IQTAEV 283

[Close]
BLAST of CmoCh05G004730 vs. TrEMBL
Match: A0A0E0CX55_9ORYZ (Uncharacterized protein OS=Oryza meridionalis PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.8e-26
Identity = 63/128 (49.22%), Postives = 87/128 (67.97%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GM +GMLLA +T G  L +W+SFLSLT+FHMYANYKAV  LSLT+LN +R SI LQ+F
Sbjct: 554 MLGMGLGMLLAHVTRGHALGVWVSFLSLTIFHMYANYKAVQSLSLTTLNYERSSILLQYF 613

Query: 61  IQTGQVKYLLMERKSIICVIVRKDATANDIFQSFFHALVTAYVPDQA-SRHLESLSWMDK 120
           +  G+  Y L+++   + + + K A A DI  SF H LV A++  ++ S H E+  W+D+
Sbjct: 614 MDNGEENYFLLDKGGSVHIFIHKQAAATDILMSFIHGLVLAHLMQKSKSGHAEARQWIDE 673

Query: 121 HYEDFIQK 128
            Y  FI K
Sbjct: 674 KYNTFISK 681

[Close]
BLAST of CmoCh05G004730 vs. TAIR10
Match: AT1G13770.1 (AT1G13770.1 Protein of unknown function, DUF647)

HSP 1 Score: 94.7 bits (234), Expect = 5.5e-20
Identity = 49/66 (74.24%), Postives = 56/66 (84.85%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GM++GMLLAR T G P+AIWLSFLSLT+FHMYANY+AV CL L SLN +R SI L HF
Sbjct: 220 MMGMSLGMLLARFTSGNPMAIWLSFLSLTVFHMYANYRAVRCLVLNSLNFERSSILLTHF 279

Query: 61  IQTGQV 67
           IQTGQV
Sbjct: 280 IQTGQV 285

[Close]
BLAST of CmoCh05G004730 vs. NCBI nr
Match: gi|659089334|ref|XP_008445451.1| (PREDICTED: UPF0420 protein C16orf58 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 127.9 bits (320), Expect = 1.7e-26
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQH+
Sbjct: 132 MIGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHY 191

Query: 61  IQTGQV 67
           IQT QV
Sbjct: 192 IQTAQV 197

[Close]
BLAST of CmoCh05G004730 vs. NCBI nr
Match: gi|659089332|ref|XP_008445450.1| (PREDICTED: UPF0420 protein C16orf58 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 127.9 bits (320), Expect = 1.7e-26
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQH+
Sbjct: 218 MIGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHY 277

Query: 61  IQTGQV 67
           IQT QV
Sbjct: 278 IQTAQV 283

[Close]
BLAST of CmoCh05G004730 vs. NCBI nr
Match: gi|108706828|gb|ABF94623.1| (expressed protein [Oryza sativa Japonica Group])

HSP 1 Score: 126.7 bits (317), Expect = 3.7e-26
Identity = 63/128 (49.22%), Postives = 88/128 (68.75%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GM +GMLLA +T G  L +W+SFLSLT+FHMYANYKAV  LSLT+LN +R SI LQ+F
Sbjct: 338 MLGMGLGMLLAHVTRGHALGVWVSFLSLTIFHMYANYKAVQSLSLTTLNYERSSILLQYF 397

Query: 61  IQTGQVKYLLMERKSIICVIVRKDATANDIFQSFFHALVTAYVPDQA-SRHLESLSWMDK 120
           +  G+  Y L++++  + + + K A A DI  SF H LV A++  ++ S H E+  W+D+
Sbjct: 398 MDNGEENYFLLDKEGSVHIFIHKQAAATDILMSFIHGLVLAHLMQKSKSGHAEARQWIDE 457

Query: 121 HYEDFIQK 128
            Y  FI K
Sbjct: 458 KYNTFISK 465

[Close]
BLAST of CmoCh05G004730 vs. NCBI nr
Match: gi|778715452|ref|XP_011657403.1| (PREDICTED: protein root UVB sensitive 3 [Cucumis sativus])

HSP 1 Score: 125.9 bits (315), Expect = 6.3e-26
Identity = 61/66 (92.42%), Postives = 65/66 (98.48%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           M+GMAIGMLLARITMGCPLAIWLSFLSLT+FHMYANYKAVCCLSLTSLNPQRCSIALQH+
Sbjct: 218 MIGMAIGMLLARITMGCPLAIWLSFLSLTMFHMYANYKAVCCLSLTSLNPQRCSIALQHY 277

Query: 61  IQTGQV 67
           IQT +V
Sbjct: 278 IQTAEV 283

[Close]
BLAST of CmoCh05G004730 vs. NCBI nr
Match: gi|658064586|ref|XP_008368237.1| (PREDICTED: LOW QUALITY PROTEIN: UPF0420 protein C16orf58 homolog [Malus domestica])

HSP 1 Score: 109.8 bits (273), Expect = 4.7e-21
Identity = 54/66 (81.82%), Postives = 61/66 (92.42%), Query Frame = 1 

Query: 1   MVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHF 60
           MVGMA+GMLLAR+TMG PLAIW SFLSLT+FHMYANYKAV CL+L SLNP+RCSI LQHF
Sbjct: 216 MVGMALGMLLARVTMGHPLAIWXSFLSLTVFHMYANYKAVRCLALNSLNPERCSIVLQHF 275

Query: 61  IQTGQV 67
           ++TGQV
Sbjct: 276 MKTGQV 281

The following BLAST results are available for this feature:
BLAST of CmoCh05G004730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RUS3_ARATH9.8e-1974.24Protein root UVB sensitive 3 OS=Arabidopsis thaliana GN=RUS3 PE=2 SV=1[more]
BLAST of CmoCh05G004730 vs. TrEMBL
Match NameE-valueIdentityDescription
Q10Q12_ORYSJ2.6e-2649.22Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g11500 PE=4 SV=1[more]
A0A0E0NRI5_ORYRU2.6e-2649.22Uncharacterized protein OS=Oryza rufipogon PE=4 SV=1[more]
A0A0E0GIY7_ORYNI2.6e-2649.22Uncharacterized protein OS=Oryza nivara PE=4 SV=1[more]
A0A0A0KIQ8_CUCSA4.4e-2692.42Uncharacterized protein OS=Cucumis sativus GN=Csa_6G366490 PE=4 SV=1[more]
A0A0E0CX55_9ORYZ5.8e-2649.22Uncharacterized protein OS=Oryza meridionalis PE=3 SV=1[more]
BLAST of CmoCh05G004730 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G13770.15.5e-2074.24 Protein of unknown function, DUF647[more]
BLAST of CmoCh05G004730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659089334|ref|XP_008445451.1|1.7e-2695.45PREDICTED: UPF0420 protein C16orf58 homolog isoform X2 [Cucumis melo][more]
gi|659089332|ref|XP_008445450.1|1.7e-2695.45PREDICTED: UPF0420 protein C16orf58 homolog isoform X1 [Cucumis melo][more]
gi|108706828|gb|ABF94623.1|3.7e-2649.22expressed protein [Oryza sativa Japonica Group][more]
gi|778715452|ref|XP_011657403.1|6.3e-2692.42PREDICTED: protein root UVB sensitive 3 [Cucumis sativus][more]
gi|658064586|ref|XP_008368237.1|4.7e-2181.82PREDICTED: LOW QUALITY PROTEIN: UPF0420 protein C16orf58 homolog [Malus domestic... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006968RUS_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G004730.1CmoCh05G004730.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006968Root UVB sensitive familyPANTHERPTHR12770FAMILY NOT NAMEDcoord: 1..127
score: 7.6
IPR006968Root UVB sensitive familyPFAMPF04884DUF647coord: 1..63
score: 1.9
NoneNo IPR availablePANTHERPTHR12770:SF22UPF0420 PROTEIN C16ORF58coord: 1..127
score: 7.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh05G004730Cla97C08G153270Watermelon (97103) v2cmowmbB800
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh05G004730Silver-seed gourdcarcmoB0196
CmoCh05G004730Silver-seed gourdcarcmoB0894
CmoCh05G004730Cucumber (Chinese Long) v3cmocucB0937
CmoCh05G004730Cucumber (Chinese Long) v3cmocucB0940
CmoCh05G004730Wax gourdcmowgoB0941
CmoCh05G004730Cucurbita moschata (Rifu)cmocmoB150
CmoCh05G004730Cucumber (Gy14) v1cgycmoB0907
CmoCh05G004730Cucurbita maxima (Rimu)cmacmoB192
CmoCh05G004730Cucurbita maxima (Rimu)cmacmoB786
CmoCh05G004730Wild cucumber (PI 183967)cmocpiB800
CmoCh05G004730Cucumber (Chinese Long) v2cmocuB796
CmoCh05G004730Melon (DHL92) v3.5.1cmomeB715
CmoCh05G004730Watermelon (Charleston Gray)cmowcgB713
CmoCh05G004730Watermelon (97103) v1cmowmB746
CmoCh05G004730Cucurbita pepo (Zucchini)cmocpeB720
CmoCh05G004730Cucurbita pepo (Zucchini)cmocpeB744
CmoCh05G004730Bottle gourd (USVL1VR-Ls)cmolsiB728
CmoCh05G004730Cucumber (Gy14) v2cgybcmoB825
CmoCh05G004730Melon (DHL92) v3.6.1cmomedB812