CmoCh05G002260 (gene) Cucurbita moschata (Rifu)

NameCmoCh05G002260
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr05 : 967309 .. 968169 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGTTAAGGGGCAAATGGGGTTGCAGCTGCACATGGTATAAATATTACCTGAAACTTGGTTATTTAGTGGTGGTTGTATCCATGTCTATTGTTCTTATAATTCTCCAATTCTTCAATTCCAGCTGTGTATGTTTGAATTTTAGTCTTGCACTAGCTTCATGCAACATCGACAGTATACTAAAGCAAGAAGCAGGATCATCAGGATCATTCCCTGTTACCGTGCTGGGAACCAGTAGTTCGGTGTGTAGCTTTCAAGATCCTTTTGGTTTAATTTATAGGGAACTAACTACCGGGAAGAGAGATCTTTAAGCTGGATGATGCTTGACCATGTTTATCATATTAGTGCGTGCGATCCCATATAGGTTGGAGAGGAGAATAAAGCATTCCTTATAAGGGTGTGGAAATCTCTCTAGTAGATCATTTCAAAACAGTGAGGCTGATTGCGATACGTAACGGGCCAAAGTGAACAATATCTATTAGTGGTGGGCTTGGACGGTTACAAGTCAGAATCAGTCTCCGAGCGGTGTGCCAGCGAAGACGCTGGACCCTTGAAGGAGGTGGATTGTGAGATCTTCCATCGGTTGGAGAGAACAAAGTACTTGATATTGTTGCTAGACTTATATGTTATTTTCTTTTTACTCAAGGTTCGCGTTTAGATCTATGATGGATTTTTTTGCTAATGGTTTATGCTAGTTGACATATCATTTATCTTTTGCTGTTACTTTTGTTATTGCTCATCTTTTGCTGGGCAGAGCATATGGAAATTATTCAGGATGTCTGTTTCTTAGATTTTTTTCTAGAGGTGTCAACGGGGTAAGTTGGGGACAAAGGAAGGCCTCCGGCCGTGCTCCCTAG

mRNA sequence

ATGAAGAAGTTAAGGGGCAAATGGGGTTGCAGCTGCACATGCTGTGTATGTTTGAATTTTAGTCTTGCACTAGCTTCATGCAACATCGACAGTATACTAAAGCAAGAAGCAGGATCATCAGGATCATTCCCTGTTACCGTGCTGGGAACCAGTAGTTCGTTGACATATCATTTATCTTTTGCTGTTACTTTTGTTATTGCTCATCTTTTGCTGGGCAGAGCATATGGAAATTATTCAGGATGTCTGTTTCTTAGATTTTTTTCTAGAGGTGTCAACGGGGTAAGTTGGGGACAAAGGAAGGCCTCCGGCCGTGCTCCCTAG

Coding sequence (CDS)

ATGAAGAAGTTAAGGGGCAAATGGGGTTGCAGCTGCACATGCTGTGTATGTTTGAATTTTAGTCTTGCACTAGCTTCATGCAACATCGACAGTATACTAAAGCAAGAAGCAGGATCATCAGGATCATTCCCTGTTACCGTGCTGGGAACCAGTAGTTCGTTGACATATCATTTATCTTTTGCTGTTACTTTTGTTATTGCTCATCTTTTGCTGGGCAGAGCATATGGAAATTATTCAGGATGTCTGTTTCTTAGATTTTTTTCTAGAGGTGTCAACGGGGTAAGTTGGGGACAAAGGAAGGCCTCCGGCCGTGCTCCCTAG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G002260.1CmoCh05G002260.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..27
score:

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh05G002260Wax gourdcmowgoB0944
CmoCh05G002260Wax gourdcmowgoB0953
CmoCh05G002260Cucurbita maxima (Rimu)cmacmoB483
CmoCh05G002260Cucurbita moschata (Rifu)cmocmoB033
CmoCh05G002260Cucurbita moschata (Rifu)cmocmoB156
CmoCh05G002260Cucurbita moschata (Rifu)cmocmoB369
CmoCh05G002260Cucurbita moschata (Rifu)cmocmoB481
CmoCh05G002260Cucumber (Gy14) v1cgycmoB0232
CmoCh05G002260Cucumber (Gy14) v1cgycmoB0643
CmoCh05G002260Cucumber (Gy14) v1cgycmoB0940
CmoCh05G002260Cucurbita maxima (Rimu)cmacmoB064
CmoCh05G002260Cucurbita maxima (Rimu)cmacmoB199
CmoCh05G002260Cucurbita maxima (Rimu)cmacmoB662
CmoCh05G002260Cucurbita maxima (Rimu)cmacmoB786
CmoCh05G002260Cucurbita maxima (Rimu)cmacmoB871
CmoCh05G002260Wild cucumber (PI 183967)cmocpiB782
CmoCh05G002260Wild cucumber (PI 183967)cmocpiB791
CmoCh05G002260Wild cucumber (PI 183967)cmocpiB807
CmoCh05G002260Cucumber (Chinese Long) v2cmocuB777
CmoCh05G002260Cucumber (Chinese Long) v2cmocuB788
CmoCh05G002260Cucumber (Chinese Long) v2cmocuB802
CmoCh05G002260Melon (DHL92) v3.5.1cmomeB718
CmoCh05G002260Melon (DHL92) v3.5.1cmomeB735
CmoCh05G002260Watermelon (Charleston Gray)cmowcgB706
CmoCh05G002260Watermelon (Charleston Gray)cmowcgB716
CmoCh05G002260Watermelon (97103) v1cmowmB748
CmoCh05G002260Watermelon (97103) v1cmowmB753
CmoCh05G002260Cucurbita pepo (Zucchini)cmocpeB720
CmoCh05G002260Cucurbita pepo (Zucchini)cmocpeB734
CmoCh05G002260Cucurbita pepo (Zucchini)cmocpeB740
CmoCh05G002260Cucurbita pepo (Zucchini)cmocpeB750
CmoCh05G002260Bottle gourd (USVL1VR-Ls)cmolsiB708
CmoCh05G002260Bottle gourd (USVL1VR-Ls)cmolsiB717
CmoCh05G002260Bottle gourd (USVL1VR-Ls)cmolsiB731
CmoCh05G002260Cucumber (Gy14) v2cgybcmoB238
CmoCh05G002260Cucumber (Gy14) v2cgybcmoB397
CmoCh05G002260Cucumber (Gy14) v2cgybcmoB832
CmoCh05G002260Melon (DHL92) v3.6.1cmomedB815
CmoCh05G002260Melon (DHL92) v3.6.1cmomedB826
CmoCh05G002260Melon (DHL92) v3.6.1cmomedB832
CmoCh05G002260Silver-seed gourdcarcmoB0147
CmoCh05G002260Silver-seed gourdcarcmoB0263
CmoCh05G002260Silver-seed gourdcarcmoB1097
CmoCh05G002260Silver-seed gourdcarcmoB1265
CmoCh05G002260Silver-seed gourdcarcmoB1319
CmoCh05G002260Cucumber (Chinese Long) v3cmocucB0918
CmoCh05G002260Cucumber (Chinese Long) v3cmocucB0933
CmoCh05G002260Cucumber (Chinese Long) v3cmocucB0928
CmoCh05G002260Cucumber (Chinese Long) v3cmocucB0945
CmoCh05G002260Watermelon (97103) v2cmowmbB777
CmoCh05G002260Watermelon (97103) v2cmowmbB792
CmoCh05G002260Watermelon (97103) v2cmowmbB802