CmoCh05G000650 (gene) Cucurbita moschata (Rifu)

NameCmoCh05G000650
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr05 : 239007 .. 239609 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTACAGCACCCAAAGAATGGCGGGAGCTACGACAAACAGCAGAAGCTGGCCCCTGCTATCACTTGAAGATGCATCCGCAATCATGGCGAGCTCACTGGCAGAGGCATCAGGTGCGTACATGAACCCTGATGCAGTCAACCCCCCTAATCCCAACCCAATTATCACACCCTTGTCACTGCGCATTCTGTTTATCTGGTTGAGTGCTGGCTGTAATATGTTGAACAGAACCCATGCTATGGCCGGGATAAGAGGTAGCAAAAGGGCTATACCACGGTTGTCACCGTCGGCTGCTATATCTGCAATTTGTTGGGCTGCGAAGGCAGGATCTGATGAGCTCAGGGCTGAGAAGACAGCTCCGGCGATGGCGGTGGTGGAGAGAAAGGCTGATAAGTTGGAATGTTCATTGGATTTTGATGAGATTAGTCCTTTCGGCAGGTTCTGGAGAGAGAGAAGGGAGATGGGCTTGGGGATCAGCTTTGGGGTGTTGTGGTTTCTGGTGGAGTTGATGCTTGTGCACTTGACACTCAGCACTGCCATTGTTGCCATGGTAGCTGCCATTGAAGTTGATTTGCTTGTTTCTGCTGAACTTTGCTCTTGA

mRNA sequence

ATGTTGTACAGCACCCAAAGAATGGCGGGAGCTACGACAAACAGCAGAAGCTGGCCCCTGCTATCACTTGAAGATGCATCCGCAATCATGGCGAGCTCACTGGCAGAGGCATCAGGTGCGTACATGAACCCTGATGCAGTCAACCCCCCTAATCCCAACCCAATTATCACACCCTTGTCACTGCGCATTCTGTTTATCTGGTTGAGTGCTGGCTGTAATATGTTGAACAGAACCCATGCTATGGCCGGGATAAGAGGTAGCAAAAGGGCTATACCACGGTTGTCACCGTCGGCTGCTATATCTGCAATTTGTTGGGCTGCGAAGGCAGGATCTGATGAGCTCAGGGCTGAGAAGACAGCTCCGGCGATGGCGGTGGTGGAGAGAAAGGCTGATAAGTTGGAATGTTCATTGGATTTTGATGAGATTAGTCCTTTCGGCAGGTTCTGGAGAGAGAGAAGGGAGATGGGCTTGGGGATCAGCTTTGGGGTGTTGTGGTTTCTGGTGGAGTTGATGCTTGTGCACTTGACACTCAGCACTGCCATTGTTGCCATGGTAGCTGCCATTGAAGTTGATTTGCTTGTTTCTGCTGAACTTTGCTCTTGA

Coding sequence (CDS)

ATGTTGTACAGCACCCAAAGAATGGCGGGAGCTACGACAAACAGCAGAAGCTGGCCCCTGCTATCACTTGAAGATGCATCCGCAATCATGGCGAGCTCACTGGCAGAGGCATCAGGTGCGTACATGAACCCTGATGCAGTCAACCCCCCTAATCCCAACCCAATTATCACACCCTTGTCACTGCGCATTCTGTTTATCTGGTTGAGTGCTGGCTGTAATATGTTGAACAGAACCCATGCTATGGCCGGGATAAGAGGTAGCAAAAGGGCTATACCACGGTTGTCACCGTCGGCTGCTATATCTGCAATTTGTTGGGCTGCGAAGGCAGGATCTGATGAGCTCAGGGCTGAGAAGACAGCTCCGGCGATGGCGGTGGTGGAGAGAAAGGCTGATAAGTTGGAATGTTCATTGGATTTTGATGAGATTAGTCCTTTCGGCAGGTTCTGGAGAGAGAGAAGGGAGATGGGCTTGGGGATCAGCTTTGGGGTGTTGTGGTTTCTGGTGGAGTTGATGCTTGTGCACTTGACACTCAGCACTGCCATTGTTGCCATGGTAGCTGCCATTGAAGTTGATTTGCTTGTTTCTGCTGAACTTTGCTCTTGA
BLAST of CmoCh05G000650 vs. TrEMBL
Match: A0A151U8Y3_CAJCA (Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_019931 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.2e-29
Identity = 99/190 (52.11%), Postives = 111/190 (58.42%), Query Frame = 1

Query: 8   MAGATTNSRSWPLLSLEDA---SAIMASSLAEASGAYMNPDAVNP-PNPNPIITPLSLRI 67
           +AGATTN RS P LSL  A   SAI   S AEASG    P+A  P P+P+PI TPL LR+
Sbjct: 1   IAGATTNRRSCPRLSLAAAAAASAIKPISPAEASGPDTRPEAPRPSPSPSPITTPLVLRM 60

Query: 68  LFIWLSAGCNMLNRTHAMAGIRGSKRAIPRLSPSAAISAICWAAKAGSDELRAEKTAPAM 127
              WLSAGC ML RTHAMAGI GS  A PRLSPS AI AIC AAKA S   R +  APA 
Sbjct: 61  RLSWLSAGCRMLKRTHAMAGIIGSSSARPRLSPS-AIWAICCAAKAASQLPRVQNVAPAS 120

Query: 128 AVVERKADKLECSLDFDEISPFGRFWRERR---EMGLGISFGVLWFLVELMLVHLTLSTA 187
           AVV             D   PFGR W ++R   E     S G+LW LV        ++ A
Sbjct: 121 AVV-------------DTWRPFGRLWGDKRVGFEGTASASLGLLWSLVGFRHFEFMMAIA 176

Query: 188 IVAMVAAIEV 191
           +VAMVAAI V
Sbjct: 181 VVAMVAAIVV 176

BLAST of CmoCh05G000650 vs. TrEMBL
Match: A0A151TKL7_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_023933 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.3e-15
Identity = 63/133 (47.37%), Postives = 76/133 (57.14%), Query Frame = 1

Query: 58  PLSLRILFIWLSAGCNMLNRTHAMAGIRGSKRAIPRLSPSAAISAICWAAKAGSDELRAE 117
           PL LR+ F W  AGC ML  THAMAGI GS  A PRLS  +A++AICWAAKA S   RAE
Sbjct: 3   PLLLRMPFSWFRAGCRMLKSTHAMAGIMGSSSASPRLSSPSAMAAICWAAKAPSQLPRAE 62

Query: 118 KTAPAMAVVERKADKLECSLDFDEISPFGRFWRERREMGL-GISFGVLWFLVELMLVHLT 177
           KTAPA+AV               E+  FG      R +G  G+S G+   L  L+L H  
Sbjct: 63  KTAPAIAV---------------EVDSFG----SGRVVGFDGMSLGLGLGLGSLVLRHFA 116

Query: 178 LSTAIVAMVAAIE 190
           L  A+  +VAAI+
Sbjct: 123 LIVAMADIVAAID 116

BLAST of CmoCh05G000650 vs. NCBI nr
Match: gi|1012364550|gb|KYP75732.1| (hypothetical protein KK1_019931, partial [Cajanus cajan])

HSP 1 Score: 136.0 bits (341), Expect = 7.4e-29
Identity = 99/190 (52.11%), Postives = 111/190 (58.42%), Query Frame = 1

Query: 8   MAGATTNSRSWPLLSLEDA---SAIMASSLAEASGAYMNPDAVNP-PNPNPIITPLSLRI 67
           +AGATTN RS P LSL  A   SAI   S AEASG    P+A  P P+P+PI TPL LR+
Sbjct: 1   IAGATTNRRSCPRLSLAAAAAASAIKPISPAEASGPDTRPEAPRPSPSPSPITTPLVLRM 60

Query: 68  LFIWLSAGCNMLNRTHAMAGIRGSKRAIPRLSPSAAISAICWAAKAGSDELRAEKTAPAM 127
              WLSAGC ML RTHAMAGI GS  A PRLSPS AI AIC AAKA S   R +  APA 
Sbjct: 61  RLSWLSAGCRMLKRTHAMAGIIGSSSARPRLSPS-AIWAICCAAKAASQLPRVQNVAPAS 120

Query: 128 AVVERKADKLECSLDFDEISPFGRFWRERR---EMGLGISFGVLWFLVELMLVHLTLSTA 187
           AVV             D   PFGR W ++R   E     S G+LW LV        ++ A
Sbjct: 121 AVV-------------DTWRPFGRLWGDKRVGFEGTASASLGLLWSLVGFRHFEFMMAIA 176

Query: 188 IVAMVAAIEV 191
           +VAMVAAI V
Sbjct: 181 VVAMVAAIVV 176

BLAST of CmoCh05G000650 vs. NCBI nr
Match: gi|1012356402|gb|KYP67588.1| (hypothetical protein KK1_023933 [Cajanus cajan])

HSP 1 Score: 89.0 bits (219), Expect = 1.0e-14
Identity = 63/133 (47.37%), Postives = 76/133 (57.14%), Query Frame = 1

Query: 58  PLSLRILFIWLSAGCNMLNRTHAMAGIRGSKRAIPRLSPSAAISAICWAAKAGSDELRAE 117
           PL LR+ F W  AGC ML  THAMAGI GS  A PRLS  +A++AICWAAKA S   RAE
Sbjct: 3   PLLLRMPFSWFRAGCRMLKSTHAMAGIMGSSSASPRLSSPSAMAAICWAAKAPSQLPRAE 62

Query: 118 KTAPAMAVVERKADKLECSLDFDEISPFGRFWRERREMGL-GISFGVLWFLVELMLVHLT 177
           KTAPA+AV               E+  FG      R +G  G+S G+   L  L+L H  
Sbjct: 63  KTAPAIAV---------------EVDSFG----SGRVVGFDGMSLGLGLGLGSLVLRHFA 116

Query: 178 LSTAIVAMVAAIE 190
           L  A+  +VAAI+
Sbjct: 123 LIVAMADIVAAID 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A151U8Y3_CAJCA5.2e-2952.11Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_019931 PE=4 SV=1[more]
A0A151TKL7_CAJCA7.3e-1547.37Uncharacterized protein OS=Cajanus cajan GN=KK1_023933 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|1012364550|gb|KYP75732.1|7.4e-2952.11hypothetical protein KK1_019931, partial [Cajanus cajan][more]
gi|1012356402|gb|KYP67588.1|1.0e-1447.37hypothetical protein KK1_023933 [Cajanus cajan][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G000650.1CmoCh05G000650.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh05G000650Silver-seed gourdcarcmoB0344
CmoCh05G000650Silver-seed gourdcarcmoB0686
CmoCh05G000650Silver-seed gourdcarcmoB0860
CmoCh05G000650Cucumber (Chinese Long) v3cmocucB0918
CmoCh05G000650Cucumber (Chinese Long) v3cmocucB0934
CmoCh05G000650Watermelon (97103) v2cmowmbB789
CmoCh05G000650Watermelon (97103) v2cmowmbB802
CmoCh05G000650Wax gourdcmowgoB0944
CmoCh05G000650Wax gourdcmowgoB0959
CmoCh05G000650Cucurbita moschata (Rifu)cmocmoB152
CmoCh05G000650Cucurbita moschata (Rifu)cmocmoB472
CmoCh05G000650Cucumber (Gy14) v1cgycmoB0125
CmoCh05G000650Cucumber (Gy14) v1cgycmoB1093
CmoCh05G000650Cucurbita maxima (Rimu)cmacmoB193
CmoCh05G000650Cucurbita maxima (Rimu)cmacmoB427
CmoCh05G000650Cucurbita maxima (Rimu)cmacmoB747
CmoCh05G000650Cucurbita maxima (Rimu)cmacmoB786
CmoCh05G000650Wild cucumber (PI 183967)cmocpiB782
CmoCh05G000650Wild cucumber (PI 183967)cmocpiB797
CmoCh05G000650Cucumber (Chinese Long) v2cmocuB777
CmoCh05G000650Cucumber (Chinese Long) v2cmocuB793
CmoCh05G000650Melon (DHL92) v3.5.1cmomeB707
CmoCh05G000650Melon (DHL92) v3.5.1cmomeB718
CmoCh05G000650Watermelon (Charleston Gray)cmowcgB703
CmoCh05G000650Watermelon (Charleston Gray)cmowcgB716
CmoCh05G000650Watermelon (97103) v1cmowmB748
CmoCh05G000650Watermelon (97103) v1cmowmB750
CmoCh05G000650Cucurbita pepo (Zucchini)cmocpeB718
CmoCh05G000650Cucurbita pepo (Zucchini)cmocpeB720
CmoCh05G000650Cucurbita pepo (Zucchini)cmocpeB731
CmoCh05G000650Cucurbita pepo (Zucchini)cmocpeB746
CmoCh05G000650Bottle gourd (USVL1VR-Ls)cmolsiB716
CmoCh05G000650Bottle gourd (USVL1VR-Ls)cmolsiB731
CmoCh05G000650Cucumber (Gy14) v2cgybcmoB238
CmoCh05G000650Cucumber (Gy14) v2cgybcmoB672
CmoCh05G000650Melon (DHL92) v3.6.1cmomedB804
CmoCh05G000650Melon (DHL92) v3.6.1cmomedB815