CmoCh04G031480 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G031480
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	shoot gravitropism 2 (SGR2)
Location	Cmo_Chr04 : 21786777 .. 21789264 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGCGACGATTGCAAGAGCCAGAAAAGTTTTCCACGAAAAAACCAAACGACTACAGAACAAAAATAATGGGAACTTTTTAATTTCAAGTTAACCACCGTGCCGGTGCGGTTGCGTCTGTCACCGCCTGTATCCAACCCTACCAGAAGCCGAAGCCACAGCCACACTGCTTTTTCTCACCGAATCTGTCTCCGCTATTCCCTTGGATCGAACATGCAAGGCAATGGTCTCAATGGCTTTTGATTCCCATCTTCTCCAGCAGCCGTCTGGAACCTGACGTGGTCCCATGTAATTCCAGCCCCTCTACATTGTGCTTGCTGAAGCCCATTTATTGAACCCTACCAGCCAAACCCTGTTTCGCCATTCCTTTCAAGTTAGAATCAGATTTCTCTGCAGGCTGGCGTGTGTGATACTTCATTTGGGTGCCTTCTGTTTCTCGTCATCGTAATTGTTTGTTTCGTTATGTGGCTGTGTGCTTCTAGGATCTTGAAGGATTTTAGCTGGGTGTTGGATTCAAGTCATAGTTGACCATTTTCTTGACGGAAGCAAATTCACTAAATCCTCTGAGCTAACCTGTCCTGTAATTGCTTCGGAGCCTCTTTCTTAGTGATAGGTTCCGAGGCAAAAATTATTCGATCAGGCGCCAAAATGGATGTCAAATAGTTCGAAAGATATGGTTGGCGGTGACATGTTGTCTTTGGCAGCTATAGGTTCTTCTGAAGTTTCAGAAGCGTCCCCTGATTCGCTAAAGAACACGCCCTCTAACATTGCAAAATTGGAGGATGTCATCGAGCACTGCGAAGGTAGGCAGAAGTATCTTGCACAGACAAGGAGTCCTTCCGACGGCGGCGATGTTCGCTGGTATTTCTGTGAAGTACCTTTGCTTGGGAATGGTGAGCGCTTTTCATTTTTTTCATCTTTAATGGTATGTTTTCGAATGCGACCTGGGCAAAATTGATGAACAAAGTAGAAAACGAAGGTGAAAATAACCGATGCAAACTTCTTGAGAGTTTAACGACGAATCATATTTGAGGATATACTGAGAAGCCTGTTTTAGGAAGACATAATTCAAAGGATTTATCCATCCATTGCCTTCCTTATAAACTTCTGCACCTATAAATACGTATATATTTTGTTTATCTTTTCTATTTTGAAATAATTAAAGGGCTTTCAAATATATTTTGTTTATCTTTTCTATTTTGAAATAAATACGTATATATTCATCTTATGAAGGTTTCCTTCTATTCTTGTCAAAGGGCTTTCAAACCTTTTGATGACTTTCTGCTGCTTGTGTTTCAACAGAGCTAGCAGCATCAGTTCCTAAGACTGAAATAGTTGGGAAGGGTGACTATTTTCGATTTGGCATGAGGGATTCTCTTGCAATAGAGGCATCTTTCTTGCAGGTGTATTTTTCGACCTCTTGGGTAGTCAGTTGATGCTTATGTTCACCCATATTTCATGAATTGCTTGTAGTGAACTATCTTGTATTTACCTTCGACAATATTTTTAACTCATGAAATTGTCTTCCCACTCACCTGCATGTGTGCTGAATTCATTATTGGATGCTAATTGTAGTTTTAATCAAGTGAAGGATACAAAATTTGATGATACCATTTTATAAGGAGTGTAAATCAAATGGGGGTGTACTAAGACCCTAAAAAAATCTTGGAATTCATGCATAATTCATAGCTTTTAGACCTGAAGCTTTCGATGTGTACATATTAACTGCTGTCGGTAGTTTTTATTACATGTCTAACGAATTCAGTAGTCGTGGATATTACCAACCATAAAATCAACTTATCCAGTTTCTGTAGGGCATTTTTTCTGTGTCTGCAATAGTTTTGAGTGGAGGGAGGGAGGGAGGGAGGTGCATTGGTAAATTTGCTGTGTTCCACCTTCTGATTGTTTTGTTTCTGGCATGCAGAAACTACCGGAGAGATCATGACACTGCTCTTTTCATATTGAAACACTTATATCGAGATATTCCTGAAGATCCCGATACACCTCCAGAATATACTGAACCCGATTCAAATGATTGCTGGTACAACCGAAGAGAAACTATTGAAGAAGAGCTTTCTTTGACATTTTCCGATGAGAATGTGGTACGAAACTTCTCTAGAAAAGCAAAGAAAATGATGAAAAATCATAGATAGACAACAAGCACATCGAATGGGGATTAGGTTAGTGAAGGCTGAACGACCGGGATTGGCATGTTAATGAATATGCAAATTTCCTCTATAAAAATGGGGAGATTTGCTGTTGGCGGGCTTGGGGTCACTTTACTCGGTATTCTCTCCTTTCTTTCCATGTACATAAAGAGGAAGACCAAATGGGGATCATAATATGTAACTTGTAAATTAAAACGTGTAAACAAGGCCAAACTGCTGTTCTCTGCCAGTAATAGAAAGTAGGCAGGCGAAGAGGTTAAAGTAGCAAAGTTCTAATGTAACCATTTATTATTCTTTAAAACCTCATCAAAGTAGAAGAACG

mRNA sequence

CCGCGACGATTGCAAGAGCCAGAAAAGTTTTCCACGAAAAAACCAAACGACTACAGAACAAAAATAATGGGAACTTTTTAATTTCAAGTTAACCACCGTGCCGGTGCGGTTGCGTCTGTCACCGCCTGTATCCAACCCTACCAGAAGCCGAAGCCACAGCCACACTGCTTTTTCTCACCGAATCTGTCTCCGCTATTCCCTTGGATCGAACATGCAAGGCAATGGTCTCAATGGCTTTTGATTCCCATCTTCTCCAGCAGCCGTCTGGAACCTGACGTGGTCCCATGTAATTCCAGCCCCTCTACATTGTGCTTGCTGAAGCCCATTTATTGAACCCTACCAGCCAAACCCTGTTTCGCCATTCCTTTCAAGTTAGAATCAGATTTCTCTGCAGGCTGGCGTGTGTGATACTTCATTTGGGTGCCTTCTGTTTCTCGTCATCGTAATTGTTTGTTTCGTTATGTGGCTGTGTGCTTCTAGGATCTTGAAGGATTTTAGCTGGGTGTTGGATTCAAGTCATAGTTGACCATTTTCTTGACGGAAGCAAATTCACTAAATCCTCTGAGCTAACCTGTCCTGTAATTGCTTCGGAGCCTCTTTCTTAGTGATAGGTTCCGAGGCAAAAATTATTCGATCAGGCGCCAAAATGGATGTCAAATAGTTCGAAAGATATGGTTGGCGGTGACATGTTGTCTTTGGCAGCTATAGGTTCTTCTGAAGTTTCAGAAGCGTCCCCTGATTCGCTAAAGAACACGCCCTCTAACATTGCAAAATTGGAGGATGTCATCGAGCACTGCGAAGGTAGGCAGAAGTATCTTGCACAGACAAGGAGTCCTTCCGACGGCGGCGATGTTCGCTGGTATTTCTGTGAAGTACCTTTGCTTGGGAATGAGCTAGCAGCATCAGTTCCTAAGACTGAAATAGTTGGGAAGGGTGACTATTTTCGATTTGGCATGAGGGATTCTCTTGCAATAGAGGCATCTTTCTTGCAGAAACTACCGGAGAGATCATGACACTGCTCTTTTCATATTGAAACACTTATATCGAGATATTCCTGAAGATCCCGATACACCTCCAGAATATACTGAACCCGATTCAAATGATTGCTGGTACAACCGAAGAGAAACTATTGAAGAAGAGCTTTCTTTGACATTTTCCGATGAGAATGTGGTACGAAACTTCTCTAGAAAAGCAAAGAAAATGATGAAAAATCATAGATAGACAACAAGCACATCGAATGGGGATTAGGTTAGTGAAGGCTGAACGACCGGGATTGGCATGTTAATGAATATGCAAATTTCCTCTATAAAAATGGGGAGATTTGCTGTTGGCGGGCTTGGGGTCACTTTACTCGGTATTCTCTCCTTTCTTTCCATGTACATAAAGAGGAAGACCAAATGGGGATCATAATATGTAACTTGTAAATTAAAACGTGTAAACAAGGCCAAACTGCTGTTCTCTGCCAGTAATAGAAAGTAGGCAGGCGAAGAGGTTAAAGTAGCAAAGTTCTAATGTAACCATTTATTATTCTTTAAAACCTCATCAAAGTAGAAGAACG

Coding sequence (CDS)

ATGTCAAATAGTTCGAAAGATATGGTTGGCGGTGACATGTTGTCTTTGGCAGCTATAGGTTCTTCTGAAGTTTCAGAAGCGTCCCCTGATTCGCTAAAGAACACGCCCTCTAACATTGCAAAATTGGAGGATGTCATCGAGCACTGCGAAGGTAGGCAGAAGTATCTTGCACAGACAAGGAGTCCTTCCGACGGCGGCGATGTTCGCTGGTATTTCTGTGAAGTACCTTTGCTTGGGAATGAGCTAGCAGCATCAGTTCCTAAGACTGAAATAGTTGGGAAGGGTGACTATTTTCGATTTGGCATGAGGGATTCTCTTGCAATAGAGGCATCTTTCTTGCAGAAACTACCGGAGAGATCATGA

Homology

[Close]

BLAST of CmoCh04G031480 vs. Swiss-Prot
Match: SHGR2_ARATH (Phospholipase SGR2 OS=Arabidopsis thaliana GN=SGR2 PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.3e-41
Identity = 79/100 (79.00%), Postives = 89/100 (89.00%), Query Frame = 1


Query: 19  IGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLL 78
           +G+ EV+E SPD LKNTPSNIA+LEDVIE C GRQKYLAQTRSPSDG DVRWYFC+VPL 
Sbjct: 8   LGTREVNETSPDLLKNTPSNIARLEDVIEQCHGRQKYLAQTRSPSDGSDVRWYFCKVPLA 67

Query: 79  GNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQKLPE 119
            NELAASVP+T++VGK +YFRFGMRDSLAIEASFLQ+  E
Sbjct: 68  ENELAASVPRTDVVGKSEYFRFGMRDSLAIEASFLQREDE 107

[Close]

BLAST of CmoCh04G031480 vs. TrEMBL
Match: A0A0A0LPY5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401290 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.3e-51
Identity = 105/116 (90.52%), Postives = 107/116 (92.24%), Query Frame = 1


Query: 3   NSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSP 62
           NSSKDM G DML  AAIGS EV EASPDSLKNTPSNIAKLEDVIEHC GRQKYLAQTRSP
Sbjct: 4   NSSKDMGGDDMLISAAIGSIEVPEASPDSLKNTPSNIAKLEDVIEHCVGRQKYLAQTRSP 63

Query: 63  SDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQKLPE 119
           SDGGDVRWYFC+VPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQ+  E
Sbjct: 64  SDGGDVRWYFCKVPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQREEE 119

[Close]

BLAST of CmoCh04G031480 vs. TrEMBL
Match: A0A0D2S8U7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G267200 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.6e-41
Identity = 82/100 (82.00%), Postives = 91/100 (91.00%), Query Frame = 1


Query: 19  IGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLL 78
           +G+S V E SPD LKNTPSNIA+LEDVIEHC+GR+KYLAQTRSPSDGGDVRWYFC+VPL 
Sbjct: 11  VGASTVEETSPDLLKNTPSNIARLEDVIEHCKGRRKYLAQTRSPSDGGDVRWYFCKVPLA 70

Query: 79  GNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQKLPE 119
            NELAAS+P+TEIVGK DYFRFGMRDSLAIEASFLQ+  E
Sbjct: 71  ENELAASIPRTEIVGKSDYFRFGMRDSLAIEASFLQREEE 110

[Close]

BLAST of CmoCh04G031480 vs. TrEMBL
Match: A0A0D2QNR0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G267200 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.6e-41
Identity = 82/100 (82.00%), Postives = 91/100 (91.00%), Query Frame = 1


Query: 19  IGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLL 78
           +G+S V E SPD LKNTPSNIA+LEDVIEHC+GR+KYLAQTRSPSDGGDVRWYFC+VPL 
Sbjct: 11  VGASTVEETSPDLLKNTPSNIARLEDVIEHCKGRRKYLAQTRSPSDGGDVRWYFCKVPLA 70

Query: 79  GNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQKLPE 119
            NELAAS+P+TEIVGK DYFRFGMRDSLAIEASFLQ+  E
Sbjct: 71  ENELAASIPRTEIVGKSDYFRFGMRDSLAIEASFLQREEE 110

[Close]

BLAST of CmoCh04G031480 vs. TrEMBL
Match: A0A0D2UUH5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G267200 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.6e-41
Identity = 82/100 (82.00%), Postives = 91/100 (91.00%), Query Frame = 1


Query: 19  IGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLL 78
           +G+S V E SPD LKNTPSNIA+LEDVIEHC+GR+KYLAQTRSPSDGGDVRWYFC+VPL 
Sbjct: 11  VGASTVEETSPDLLKNTPSNIARLEDVIEHCKGRRKYLAQTRSPSDGGDVRWYFCKVPLA 70

Query: 79  GNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQKLPE 119
            NELAAS+P+TEIVGK DYFRFGMRDSLAIEASFLQ+  E
Sbjct: 71  ENELAASIPRTEIVGKSDYFRFGMRDSLAIEASFLQREEE 110

[Close]

BLAST of CmoCh04G031480 vs. TrEMBL
Match: A0A061FRG1_THECC (Shoot gravitropism 2 (SGR2) isoform 2 OS=Theobroma cacao GN=TCM_036283 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 3.5e-41
Identity = 82/100 (82.00%), Postives = 90/100 (90.00%), Query Frame = 1


Query: 19  IGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLL 78
           +G+S V E SPD LKNTP NIA+LEDVIEHC+GRQKYLAQTRSPSDGGDVRWYFC+VPL 
Sbjct: 11  VGASGVEETSPDLLKNTPYNIARLEDVIEHCKGRQKYLAQTRSPSDGGDVRWYFCKVPLA 70

Query: 79  GNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQKLPE 119
            NELAAS+P+TEIVGK DYFRFGMRDSLAIEASFLQ+  E
Sbjct: 71  ENELAASIPRTEIVGKSDYFRFGMRDSLAIEASFLQREEE 110

[Close]

BLAST of CmoCh04G031480 vs. TAIR10
Match: AT1G31480.1 (AT1G31480.1 shoot gravitropism 2 (SGR2))

HSP 1 Score: 170.2 bits (430), Expect = 7.5e-43
Identity = 79/100 (79.00%), Postives = 89/100 (89.00%), Query Frame = 1


Query: 19  IGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSPSDGGDVRWYFCEVPLL 78
           +G+ EV+E SPD LKNTPSNIA+LEDVIE C GRQKYLAQTRSPSDG DVRWYFC+VPL 
Sbjct: 8   LGTREVNETSPDLLKNTPSNIARLEDVIEQCHGRQKYLAQTRSPSDGSDVRWYFCKVPLA 67

Query: 79  GNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQKLPE 119
            NELAASVP+T++VGK +YFRFGMRDSLAIEASFLQ+  E
Sbjct: 68  ENELAASVPRTDVVGKSEYFRFGMRDSLAIEASFLQREDE 107

[Close]

BLAST of CmoCh04G031480 vs. NCBI nr
Match: gi|449442116|ref|XP_004138828.1| (PREDICTED: phospholipase SGR2 isoform X1 [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 1.9e-51
Identity = 105/116 (90.52%), Postives = 107/116 (92.24%), Query Frame = 1


Query: 3   NSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSP 62
           NSSKDM G DML  AAIGS EV EASPDSLKNTPSNIAKLEDVIEHC GRQKYLAQTRSP
Sbjct: 4   NSSKDMGGDDMLISAAIGSIEVPEASPDSLKNTPSNIAKLEDVIEHCVGRQKYLAQTRSP 63

Query: 63  SDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQKLPE 119
           SDGGDVRWYFC+VPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQ+  E
Sbjct: 64  SDGGDVRWYFCKVPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQREEE 119

[Close]

BLAST of CmoCh04G031480 vs. NCBI nr
Match: gi|778672859|ref|XP_011649883.1| (PREDICTED: phospholipase SGR2 isoform X4 [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 1.9e-51
Identity = 105/116 (90.52%), Postives = 107/116 (92.24%), Query Frame = 1


Query: 3   NSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSP 62
           NSSKDM G DML  AAIGS EV EASPDSLKNTPSNIAKLEDVIEHC GRQKYLAQTRSP
Sbjct: 4   NSSKDMGGDDMLISAAIGSIEVPEASPDSLKNTPSNIAKLEDVIEHCVGRQKYLAQTRSP 63

Query: 63  SDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQKLPE 119
           SDGGDVRWYFC+VPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQ+  E
Sbjct: 64  SDGGDVRWYFCKVPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQREEE 119

[Close]

BLAST of CmoCh04G031480 vs. NCBI nr
Match: gi|700207950|gb|KGN63069.1| (hypothetical protein Csa_2G401290 [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 1.9e-51
Identity = 105/116 (90.52%), Postives = 107/116 (92.24%), Query Frame = 1


Query: 3   NSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSP 62
           NSSKDM G DML  AAIGS EV EASPDSLKNTPSNIAKLEDVIEHC GRQKYLAQTRSP
Sbjct: 4   NSSKDMGGDDMLISAAIGSIEVPEASPDSLKNTPSNIAKLEDVIEHCVGRQKYLAQTRSP 63

Query: 63  SDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQKLPE 119
           SDGGDVRWYFC+VPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQ+  E
Sbjct: 64  SDGGDVRWYFCKVPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQREEE 119

[Close]

BLAST of CmoCh04G031480 vs. NCBI nr
Match: gi|778672854|ref|XP_011649882.1| (PREDICTED: phospholipase SGR2 isoform X3 [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 1.9e-51
Identity = 105/116 (90.52%), Postives = 107/116 (92.24%), Query Frame = 1


Query: 3   NSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSP 62
           NSSKDM G DML  AAIGS EV EASPDSLKNTPSNIAKLEDVIEHC GRQKYLAQTRSP
Sbjct: 4   NSSKDMGGDDMLISAAIGSIEVPEASPDSLKNTPSNIAKLEDVIEHCVGRQKYLAQTRSP 63

Query: 63  SDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQKLPE 119
           SDGGDVRWYFC+VPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQ+  E
Sbjct: 64  SDGGDVRWYFCKVPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQREEE 119

[Close]

BLAST of CmoCh04G031480 vs. NCBI nr
Match: gi|659081134|ref|XP_008441170.1| (PREDICTED: LOW QUALITY PROTEIN: phospholipase SGR2 [Cucumis melo])

HSP 1 Score: 206.5 bits (524), Expect = 2.7e-50
Identity = 103/116 (88.79%), Postives = 105/116 (90.52%), Query Frame = 1


Query: 3   NSSKDMVGGDMLSLAAIGSSEVSEASPDSLKNTPSNIAKLEDVIEHCEGRQKYLAQTRSP 62
           NSSKDM G DML  AAIGS EV EASPD  KNTPSNIAKLEDVIEHC GRQKYLAQTRSP
Sbjct: 4   NSSKDMGGDDMLISAAIGSVEVPEASPDXTKNTPSNIAKLEDVIEHCVGRQKYLAQTRSP 63

Query: 63  SDGGDVRWYFCEVPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQKLPE 119
           SDGGDVRWYFC+VPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQ+  E
Sbjct: 64  SDGGDVRWYFCKVPLLGNELAASVPKTEIVGKGDYFRFGMRDSLAIEASFLQREEE 119

The following BLAST results are available for this feature:

BLAST of CmoCh04G031480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SHGR2_ARATH	1.3e-41	79.00	Phospholipase SGR2 OS=Arabidopsis thaliana GN=SGR2 PE=1 SV=1	[more]

BLAST of CmoCh04G031480 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPY5_CUCSA	1.3e-51	90.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401290 PE=4 SV=1	[more]
A0A0D2S8U7_GOSRA	1.6e-41	82.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G267200 PE=4 SV=1	[more]
A0A0D2QNR0_GOSRA	1.6e-41	82.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G267200 PE=4 SV=1	[more]
A0A0D2UUH5_GOSRA	1.6e-41	82.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G267200 PE=4 SV=1	[more]
A0A061FRG1_THECC	3.5e-41	82.00	Shoot gravitropism 2 (SGR2) isoform 2 OS=Theobroma cacao GN=TCM_036283 PE=4 SV=1	[more]

BLAST of CmoCh04G031480 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31480.1	7.5e-43	79.00	shoot gravitropism 2 (SGR2)	[more]

BLAST of CmoCh04G031480 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442116\|ref\|XP_004138828.1\|	1.9e-51	90.52	PREDICTED: phospholipase SGR2 isoform X1 [Cucumis sativus]	[more]
gi\|778672859\|ref\|XP_011649883.1\|	1.9e-51	90.52	PREDICTED: phospholipase SGR2 isoform X4 [Cucumis sativus]	[more]
gi\|700207950\|gb\|KGN63069.1\|	1.9e-51	90.52	hypothetical protein Csa_2G401290 [Cucumis sativus]	[more]
gi\|778672854\|ref\|XP_011649882.1\|	1.9e-51	90.52	PREDICTED: phospholipase SGR2 isoform X3 [Cucumis sativus]	[more]
gi\|659081134\|ref\|XP_008441170.1\|	2.7e-50	88.79	PREDICTED: LOW QUALITY PROTEIN: phospholipase SGR2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009660	amyloplast organization
biological_process	GO:0009590	detection of gravity
biological_process	GO:0046486	glycerolipid metabolic process
biological_process	GO:0009959	negative gravitropism
biological_process	GO:0009395	phospholipid catabolic process
biological_process	GO:0009605	response to external stimulus
biological_process	GO:0009629	response to gravity
biological_process	GO:0008150	biological_process
cellular_component	GO:0009705	plant-type vacuole membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005773	vacuole
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008970	phosphatidylcholine 1-acylhydrolase activity
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G031480.1	CmoCh04G031480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23509	FAMILY NOT NAMED	coord: 90..114 score: 2.8E-21coord: 22..74 score: 2.8
None	No IPR available	PANTHER	PTHR23509:SF10	PHOSPHOLIPASE DDHD1	coord: 90..114 score: 2.8E-21coord: 22..74 score: 2.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G031480	Cucsa.088600	Cucumber (Gy14) v1	cgycmoB0166
CmoCh04G031480	CmaCh15G000140	Cucurbita maxima (Rimu)	cmacmoB308
CmoCh04G031480	CmaCh04G030260	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G031480	Csa2G401290	Cucumber (Chinese Long) v2	cmocuB684
CmoCh04G031480	CSPI02G24630	Wild cucumber (PI 183967)	cmocpiB695
CmoCh04G031480	Lsi03G004830	Bottle gourd (USVL1VR-Ls)	cmolsiB645
CmoCh04G031480	Cp4.1LG13g11840	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G031480	Cp4.1LG01g26290	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G031480	CsaV3_2G033160	Cucumber (Chinese Long) v3	cmocucB0812
CmoCh04G031480	Bhi04G002093	Wax gourd	cmowgoB0857
CmoCh04G031480	CsGy2G024410	Cucumber (Gy14) v2	cgybcmoB236

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G031480	CmoCh15G000150	Cucurbita moschata (Rifu)	cmocmoB261

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G031480	Melon (DHL92) v3.6.1	cmomedB759
CmoCh04G031480	Silver-seed gourd	carcmoB0033
CmoCh04G031480	Watermelon (97103) v2	cmowmbB702
CmoCh04G031480	Watermelon (97103) v2	cmowmbB708
CmoCh04G031480	Melon (DHL92) v3.5.1	cmomeB671
CmoCh04G031480	Watermelon (Charleston Gray)	cmowcgB622
CmoCh04G031480	Watermelon (Charleston Gray)	cmowcgB633
CmoCh04G031480	Watermelon (97103) v1	cmowmB723
CmoCh04G031480	Watermelon (97103) v1	cmowmB735