CmoCh04G029450 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AACACTGCCATCTAAAAATGATTTGCCTCCTCATTCTAATCGCCCTCAATTTCAGTTTCCTCGACCTCTCACAGGCCAGGCACCACAACAACCTCCCTTCCACGGCCGCGGTCGTCGGTACCGTCTTCTGCGACACGTGTTTTCAAGACACGTTTTCTAAGTCAAGTCACTTCATTTCAGGTACTTTACCAACTAGCTTGTAGAATTAATATGATGTTGGTTTGTTCAGATATTGATGCGTACTATTTAGGCGCGACGGTGGCTGTCGAATGTGGCGATGGGGGATCGAACCCGAGTTTTAGAGACGAAGTAAAGACAGACAAAACAGGGGAATTCAAGATTCAGCTGCCAGTTTCAGTGAGGAAGATTGAGGAATGTTATGTGCGGTTAATAAGAAGCAGTGAACCATATTGTGCGGTGGCTGCAAGAGCCAAATCATCATCGCTTAAGCTCAAGTCAAGAAAACAAGGCACGCATGTGTTCTCGGCTGGATTCTTCACTTTCAAGCCTCTTAAACACCCAAAACTTTGCAGCCATAACTCACATTCTAGTGAATTTGATGACACGAAACAAGTCGTTGACTTCCCGGGGTTACCGGCTCCGATCCAGAACCCGACCGTGCCGAATGTTCCTCGGATTTACGATAACCTTCCGCCTCTAACTCTTCTTCCTGGACTTCCTCCATTGCCTCAGCTTCCTCCTCTCCCTCCTCTTCCACCTCTCCCTGTTTTTCCATTGTTTCCACCAAAAAAGGATGATGAAAATGTACAAACTCCAAAGATAAGTCAAAACCCGGACATGTTTCATCCACAAACTCTCCTTCCAATTCCATCTTTAAAGCCTTTGAGGCCACATTTTGTTATGCCTCCACATAAGCTGCGTCACCATCCTCTCACGCATGGTCCTTTTTCGCCTTCATTCTCAACTCCTACACCGCCCTCGGCCGCCGCCGACGAGTTAGCTCCGTCCCCGCCGCTCCCTTTTTCACTCCCACCCATCCCTCGTATGCCCGAGATCTCCTCACCTCCAAAGGAAACTTCTCCTTAAAAAATTGTAACGACCCTTGTTTTCAAATGATTTCAGTAACAAAAATAAAACTTTGAATTAGTAGTTTTTACCTATTCATAGTACGAATTAGTAATTGTGAACGAAATCGATGAACTTGCGAGTAGATGATGGGATTTGACATGAAAGATTGTGTTGTTTTGGATAAGATTGATCGTATGATTATTCAAATCATCAAAGGTTTATCAAATGGATTAAATTGGACGATTGATCCAATTGCTTTTGTTTGTTATGGATTTTGTTCTTTTGTGATCAATAATTTGAATATGTTATTTTATTTTCTAAATCTTGTTTAAACAAAAAAAAATTATTATAAAAGGACATAAATTTCAGACCTTAAAAAAAATGACAATTAAGTAAAATTATAATGATGCTGATATTCAAAATATATATATAAAAAATGTATCGAAGAAAAAAATGTGAAATCTTTTTCCAAGCAAGAACAAAATTATTTTATCCTTTTTAGCAGGAGACAAATTATACATTCGATTCGAGAGAGGATAATAAATGTTTTTATCGGTTCATGAAGATTCAAATCCCGAAAGTAAATTTAGGTTGAAATTGGTACCAAATCCTAAATTTGTAGCAGTTCTTGGGGGAGTAGACACATAGTGGAGATTAAATTAGAGCGTTCTATCGAACAAAACCATCGAAGCAAAGGAGTCACCGGGAGCGCGATAAACAGAGGGGAAGAGGGCAGTAGCTTTATTTTCGCGGAATTCGTAGCTTTAATTTCATCGCCTTCAATTCCTTTTTCCAATCTAAACGCCCCTTCAAACGCGCAATCTTGATTTAGCTTGAAATCCCAATTATCTGCGTGCGTGATTTTTCCCAAAAAGTGCACGTATATATTTTCCGTATATTCTCCCGATTTCCGTCTTCCAGGTTTCTCTGTCCTCCACCCACCCACCCACCCACCCACCGAAGATCGTATTTTCTTTCGGTCTTCTCTTCTCCCTCCACTTTACTGCTCTTTCAAGGTGCGCTTCTATTTTTCTCCTTTTTCGTATGAATAGTTCAAGGGCATCCCGATGATCGCCCCAAATTTGTATTGTTCTGTATTGGGATTCTCAGTTTTTTTCATGATTTGTGCGTATTCATGGTCCGATCGTCCATTTTTTGAGTTTTTTCTTGTGGGATTGTCGTATAATTTCAATAGTTTTTGATGATCATGATCAGCTTGGTATGCTATTGATGTTGTCAAGGTATCTTGTTTCCTCCTCATCGAAGGAAAGAATATGTGTTTTCAGAGGTCACCCAGAAAAAAAATCTCAATTTCTTTAGACGAGAGGGTAATTTTGACGAAGATTATGGCATTTTATTAACCCTTTGATTGATTTCTGGCTGTTTCAACAAATTTTTGTTTCATTATTGTGATGAGTGCAGCAAAGGATTGCTGCCGACAGATTTATGTTCCTTGAAATAATGCCGATTGTTGGTTTAATGAACGATCTTAGTAGAATTTTTTTGATTTGACTTGCTATCTTGGCGATCGCATAGGCATTTATGCATCATAGTTGGTTTAAGGATAATCCCTTGGGATCCTCATTTGATTATCAGTGTTACTGAACTGTGGCTGCTTATTTTACAGGTGAAATTCACAGTTTGA AACACTGCCATCTAAAAATGATTTGCCTCCTCATTCTAATCGCCCTCAATTTCAGTTTCCTCGACCTCTCACAGGCCAGGCACCACAACAACCTCCCTTCCACGGCCGCGGTCGTCGGTACCGTCTTCTGCGACACGTGTTTTCAAGACACGTTTTCTAAGTCAAGTCACTTCATTTCAGGCGCGACGGTGGCTGTCGAATGTGGCGATGGGGGATCGAACCCGAGTTTTAGAGACGAAGTAAAGACAGACAAAACAGGGGAATTCAAGATTCAGCTGCCAGTTTCAGTGAGGAAGATTGAGGAATGTTATGTGCGGTTAATAAGAAGCAGTGAACCATATTGTGCGGTGGCTGCAAGAGCCAAATCATCATCGCTTAAGCTCAAGTCAAGAAAACAAGGCACGCATGTGTTCTCGGCTGGATTCTTCACTTTCAAGCCTCTTAAACACCCAAAACTTTGCAGCCATAACTCACATTCTAGTGAATTTGATGACACGAAACAAGTCGTTGACTTCCCGGGGTTACCGGCTCCGATCCAGAACCCGACCGTGCCGAATGTTCCTCGGATTTACGATAACCTTCCGCCTCTAACTCTTCTTCCTGGACTTCCTCCATTGCCTCAGCTTCCTCCTCTCCCTCCTCTTCCACCTCTCCCTGTTTTTCCATTGTTTCCACCAAAAAAGGATGATGAAAATGTACAAACTCCAAAGATAAGTCAAAACCCGGACATGTTTCATCCACAAACTCTCCTTCCAATTCCATCTTTAAAGCCTTTGAGGCCACATTTTGTTATGCCTCCACATAAGCTGCGTCACCATCCTCTCACGCATGGTCCTTTTTCGCCTTCATTCTCAACTCCTACACCGCCCTCGGCCGCCGCCGACGAGTTAGCTCCGTCCCCGCCGCTCCCTTTTTCACTCCCACCCATCCCTCGTTTCTCTGTCCTCCACCCACCCACCCACCCACCCACCGAAGATCGTATTTTCTTTCGGTCTTCTCTTCTCCCTCCACTTTACTGCTCTTTCAAGGTGAAATTCACAGTTTGA ATGATTTGCCTCCTCATTCTAATCGCCCTCAATTTCAGTTTCCTCGACCTCTCACAGGCCAGGCACCACAACAACCTCCCTTCCACGGCCGCGGTCGTCGGTACCGTCTTCTGCGACACGTGTTTTCAAGACACGTTTTCTAAGTCAAGTCACTTCATTTCAGGCGCGACGGTGGCTGTCGAATGTGGCGATGGGGGATCGAACCCGAGTTTTAGAGACGAAGTAAAGACAGACAAAACAGGGGAATTCAAGATTCAGCTGCCAGTTTCAGTGAGGAAGATTGAGGAATGTTATGTGCGGTTAATAAGAAGCAGTGAACCATATTGTGCGGTGGCTGCAAGAGCCAAATCATCATCGCTTAAGCTCAAGTCAAGAAAACAAGGCACGCATGTGTTCTCGGCTGGATTCTTCACTTTCAAGCCTCTTAAACACCCAAAACTTTGCAGCCATAACTCACATTCTAGTGAATTTGATGACACGAAACAAGTCGTTGACTTCCCGGGGTTACCGGCTCCGATCCAGAACCCGACCGTGCCGAATGTTCCTCGGATTTACGATAACCTTCCGCCTCTAACTCTTCTTCCTGGACTTCCTCCATTGCCTCAGCTTCCTCCTCTCCCTCCTCTTCCACCTCTCCCTGTTTTTCCATTGTTTCCACCAAAAAAGGATGATGAAAATGTACAAACTCCAAAGATAAGTCAAAACCCGGACATGTTTCATCCACAAACTCTCCTTCCAATTCCATCTTTAAAGCCTTTGAGGCCACATTTTGTTATGCCTCCACATAAGCTGCGTCACCATCCTCTCACGCATGGTCCTTTTTCGCCTTCATTCTCAACTCCTACACCGCCCTCGGCCGCCGCCGACGAGTTAGCTCCGTCCCCGCCGCTCCCTTTTTCACTCCCACCCATCCCTCGTTTCTCTGTCCTCCACCCACCCACCCACCCACCCACCGAAGATCGTATTTTCTTTCGGTCTTCTCTTCTCCCTCCACTTTACTGCTCTTTCAAGGTGAAATTCACAGTTTGA
BLAST of CmoCh04G029450 vs. TrEMBL
Match: A0A0A0KXM2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G642130 PE=4 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 2.6e-89 Identity = 189/291 (64.95%), Postives = 216/291 (74.23%), Query Frame = 1
BLAST of CmoCh04G029450 vs. TrEMBL
Match: A0A067FY85_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019020mg PE=4 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 2.2e-59 Identity = 160/328 (48.78%), Postives = 190/328 (57.93%), Query Frame = 1
BLAST of CmoCh04G029450 vs. TrEMBL
Match: B9SIV7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0790500 PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 2.8e-59 Identity = 156/345 (45.22%), Postives = 198/345 (57.39%), Query Frame = 1
BLAST of CmoCh04G029450 vs. TrEMBL
Match: U5FLV7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s13490g PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 4.8e-59 Identity = 167/346 (48.27%), Postives = 204/346 (58.96%), Query Frame = 1
BLAST of CmoCh04G029450 vs. TrEMBL
Match: V4UWT1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012100mg PE=4 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 1.1e-58 Identity = 160/328 (48.78%), Postives = 189/328 (57.62%), Query Frame = 1
BLAST of CmoCh04G029450 vs. TAIR10
Match: AT5G15780.1 (AT5G15780.1 Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 184.5 bits (467), Expect = 1.1e-46 Identity = 144/324 (44.44%), Postives = 175/324 (54.01%), Query Frame = 1
BLAST of CmoCh04G029450 vs. TAIR10
Match: AT5G13140.1 (AT5G13140.1 Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 60.5 bits (145), Expect = 2.4e-09 Identity = 64/246 (26.02%), Postives = 105/246 (42.68%), Query Frame = 1
BLAST of CmoCh04G029450 vs. TAIR10
Match: AT5G47635.1 (AT5G47635.1 Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 48.5 bits (114), Expect = 9.4e-06 Identity = 34/113 (30.09%), Postives = 53/113 (46.90%), Query Frame = 1
BLAST of CmoCh04G029450 vs. NCBI nr
Match: gi|778708779|ref|XP_011656281.1| (PREDICTED: proline-rich protein 4-like [Cucumis sativus]) HSP 1 Score: 337.0 bits (863), Expect = 3.8e-89 Identity = 189/291 (64.95%), Postives = 216/291 (74.23%), Query Frame = 1
BLAST of CmoCh04G029450 vs. NCBI nr
Match: gi|1009127424|ref|XP_015880688.1| (PREDICTED: proline-rich protein 4 [Ziziphus jujuba]) HSP 1 Score: 248.8 bits (634), Expect = 1.3e-62 Identity = 175/340 (51.47%), Postives = 202/340 (59.41%), Query Frame = 1
BLAST of CmoCh04G029450 vs. NCBI nr
Match: gi|747076980|ref|XP_011085586.1| (PREDICTED: proline-rich extensin-like protein EPR1 [Sesamum indicum]) HSP 1 Score: 241.9 bits (616), Expect = 1.6e-60 Identity = 157/331 (47.43%), Postives = 199/331 (60.12%), Query Frame = 1
BLAST of CmoCh04G029450 vs. NCBI nr
Match: gi|641853485|gb|KDO72303.1| (hypothetical protein CISIN_1g019020mg [Citrus sinensis]) HSP 1 Score: 237.7 bits (605), Expect = 3.1e-59 Identity = 160/328 (48.78%), Postives = 190/328 (57.93%), Query Frame = 1
BLAST of CmoCh04G029450 vs. NCBI nr
Match: gi|255569926|ref|XP_002525926.1| (PREDICTED: proline-rich protein 4 [Ricinus communis]) HSP 1 Score: 237.3 bits (604), Expect = 4.0e-59 Identity = 156/345 (45.22%), Postives = 198/345 (57.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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