CmoCh04G029380 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTCTACACCACTATTACTCAGAGGAATCTCAATATCAACCCTCGCATTACGTTTCAGTTCTTATCTCTGCTCCTCAAAAATGGAGATATCCCATTGGCAGAGCAGCCTTCATCCAATACTCCTGCTTTCATTCCTCATCTTCCCTCTTGTAGCTGCAGATCAGACCTGCTCCAATGGGCTCTGCAAGGTTTCTTTTTCCCTTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTCGTTTTAATGAATGATTGTGTTCTTAAGCTGGGGGATGGCTGCTCTTCTAATGGAGATTGTGGACCTGGATTGTATTGCTTGTCATGCCCACCAACCTTCTTTGCCTCCAGATGTGTTCGATCTCTTTACACTGATCCCTTCAAACTTCTGGTATGCATTTTTCTTGCCCTGCTACTCAAATATTCTTGCTGGGTTTCCCTTCAACCACGGTAGCTCTACTGGAAAATAGTTTCGAGGCTGACCGTGATGCCTAACGGGCCAAACTAGACAATATCGATTAGCGGTAGACTTAGGCCTTTACAAATGGTATCACAGTCCGACAGCAAGTAGTGTGCCAATAAGGATACTGGCCCCCGAGGGGTGAATGTTAGGAATCACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTGGCTTTGTTTTGGGCTTCCCCTAAAGGCCTCGTACCAATGGAGATGTATTCCTTAACAGTGAATTGTTAGATCTCACATCGGTTAGAGAGAAATGAATCATTCCTTATAAGGATGTAGAAACCTATCTCTAGCAAACGAGTTTTAAAGCCGTTAGGCTGACGGCGATATGTAACGGGTCAAAGTGGACAATATCTACTGGCTGTGGACTTGGGTCGTTACAAATGGTATCAGAGCCAAACAGAGAGCGGCGTGCCAATGAGGACGTTGGGCCCCCAAGAGGGGTGGATTGTTAGATCCCACGTCGATTGGAGAGAGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGTTTTAAAACCGTGAGACTAGCCACGATACATAACGAGCCAAAGCGGACAGTATCTATTAGTGGCGGACTTGAGCCATTACAAATGATATCAAAGCTAGACATCGAGTAGTGTGTCAACGAGGATGCTGGCCACCAAGAGGGGTGATTGTTAGATCCCACCTCAGTTGGATAGGAGAATGAAGCATTCCTTATGAGGGTGTGGAAACCTCTCCCTAGCATATGTTTTAAAACCATGAGGTGACAGCGAAACATAATGGGTCAAAGCGAACAATATCTACTAGAGGTGGACTTGGACTATTACAAATGATATAAGAGCCAGATATCAGGCGGTGTGCCAACGAGGACGCTAGCCCCCAAGGGTGTGGATTGTTAGATTCCACTTCGGTTGGAGAGAAGAACGAAGCATTCTTTATGAGAGTGTGGAAACCTCTCCCTGACATACATTTTAAAACTGTAAAGCTGACAGCGATACGTAACGAGTCAAAACAGATAATATTTCCACTCATTCATCAAAAGAGACTTGTATAAAGTTGTTTCCACTCATTCATCATTCCACTCAAACTCTCATTATTGTTTTGTTTCAAAATGGAATCTTTCCATAATGGGAATCTTGGAAACTCTCCAAAATGCTGATAATCTATCTGTTTTGATGCAGAATAATTCATTGCCATTCAACAAATATGCATATCTAACAACGCACAATTCATTTGCCATTGAAGGAGAGCCCTCTCGCACCGGAGTTCCACGAGTTACACTTAACAATCAAGAGGACACCATCGCCCAACAGCTTAATGTATAGCTTTAATTAGTGTTTGTTTCTATATGTTGTGAGCTTAATTATTTTCTAACCCCATTTTGCAGAATGGAGTTAGAGGGTTTATGTTGGATACCTATGATTTTCTTGGAGATGTCTGGCTCTGCCATTCCTTTGGAGGAAAATGCCACAACTACACTGCATTTGTATGTTCATATTCTCATCTTTTTTTTTTTTTAGGCTATGTCCTTCCAGGACGATGTGCCAACGAGGACGTTGGGACTCTAAAAAAGATGGATTGTGAGATCCCACATTGATTGAAGAGGAAAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCTCTAGCAGATGCATTTTACAACCGTAAGGCTGACAGTGATACGTAACGGGCCAACGTGGACAATATCTACTAGTGATGAACTTGGGCCGTTACAAAAAAAATGTTGCAAGATAGTATCGGGTGTCAACTGTTCTAGGAAAGGTCGACCAAACGACATGTGGTTGGGCTTTTTCCATGTGTTGTGTTCTTTACATTTCATTCTTATTAACATCTCAATTGTTATAGGAACCAGCACTAGACACATTGAAGGTGATAGAGGCATTCTTGGCAGCAAACACCAAAGAGATTGTCACATTGATCTTAGAAGACTATGTTCAATCTCCCAATGGACTGACCAAGGTATTCACCGAAGCCGGGCTCAAAAAATTCTGGTTTCCGATCACGAATATGCCGAAGGACAACGACGACTGGCCTCGAGTCAGTGACATGGTGGCAAACAACCAAAGGCTGCTGGTCTTCACATCAAACAGAGCCAAGGAAGCAACAGAAGGAATAGCATACCAATGGAATTACATGGTCGAAAATCAATGTAAGCTACCTAACAAATACCACAAAGTGACCATCTGGACGAACATACATTAAAAAGAGCCTAAAATTTTGCAGATGGGAATGATGGAATGCAAGAAGGGAGCTGTCCAAAGAGGGCAGAATCATCAGCACTTGATGACAAGAGAAAATCACTGGTTTTGGTGAACTATTTCCCAACAGTTCCATTCAAAAGACAAGCTTGTGAGCATAACTCAGAGGATCTGGTTGGCATGCTTCAAACTTGTCATGGGGCAGCTGGTAACCGATGGGCTAACTTCGTGGCTCTTGATTTCTACAAGGTTTGTGTGTTCTCTGATCACCCCTTAACCCTTCTCTTTTCATCTCTTGAAACTGACCAAATTTTATGCAGAGGAGCGATGGAGGTGGAGCCTTTCAAGCTTTGGACACTCTGAATGGGGAACTCTTGTGTGGGTCGACTGACATTCATTCATGTGTGGGTTGAGTAAATTGATACTCATGGGCTTCGACATGTCGCCCAATCTCAGCCCATTAGTACTTGTGTCCATACCACCATTTGGGACAATAGAATCCATTTGATAACATGAAAATACTTACAAGAATAAATGTATGTTTGGGATGTTCTTATGATATAGTTGACTCATGAGATGAGTAATAAGGGCAGATCACATCCTAGAATTTGGGATGACGTCAAATTAAGATGATGAAATAAAGATGATGAAATCAAGATGATGAAATAAAATGCAAC TTCTCTACACCACTATTACTCAGAGGAATCTCAATATCAACCCTCGCATTACGTTTCAGTTCTTATCTCTGCTCCTCAAAAATGGAGATATCCCATTGGCAGAGCAGCCTTCATCCAATACTCCTGCTTTCATTCCTCATCTTCCCTCTTGTAGCTGCAGATCAGACCTGCTCCAATGGGCTCTGCAAGAATAATTCATTGCCATTCAACAAATATGCATATCTAACAACGCACAATTCATTTGCCATTGAAGGAGAGCCCTCTCGCACCGGAGTTCCACGAGTTACACTTAACAATCAAGAGGACACCATCGCCCAACAGCTTAATAATGGAGTTAGAGGGTTTATGTTGGATACCTATGATTTTCTTGGAGATGAACCAGCACTAGACACATTGAAGGTGATAGAGGCATTCTTGGCAGCAAACACCAAAGAGATTGTCACATTGATCTTAGAAGACTATGTTCAATCTCCCAATGGACTGACCAAGGTATTCACCGAAGCCGGGCTCAAAAAATTCTGGTTTCCGATCACGAATATGCCGAAGGACAACGACGACTGGCCTCGAGTCAGTGACATGGTGGCAAACAACCAAAGGCTGCTGGTCTTCACATCAAACAGAGCCAAGGAAGCAACAGAAGGAATAGCATACCAATGGAATTACATGGTCGAAAATCAATATGGGAATGATGGAATGCAAGAAGGGAGCTGTCCAAAGAGGGCAGAATCATCAGCACTTGATGACAAGAGAAAATCACTGGTTTTGGTGAACTATTTCCCAACAGTTCCATTCAAAAGACAAGCTTGTGAGCATAACTCAGAGGATCTGGTTGGCATGCTTCAAACTTGTCATGGGGCAGCTGGTAACCGATGGGCTAACTTCGTGGCTCTTGATTTCTACAAGAGGAGCGATGGAGGTGGAGCCTTTCAAGCTTTGGACACTCTGAATGGGGAACTCTTGTGTGGGTCGACTGACATTCATTCATGTGTGGGTTGAGTAAATTGATACTCATGGGCTTCGACATGTCGCCCAATCTCAGCCCATTAGTACTTGTGTCCATACCACCATTTGGGACAATAGAATCCATTTGATAACATGAAAATACTTACAAGAATAAATGTATGTTTGGGATGTTCTTATGATATAGTTGACTCATGAGATGAGTAATAAGGGCAGATCACATCCTAGAATTTGGGATGACGTCAAATTAAGATGATGAAATAAAGATGATGAAATCAAGATGATGAAATAAAATGCAAC ATGGAGATATCCCATTGGCAGAGCAGCCTTCATCCAATACTCCTGCTTTCATTCCTCATCTTCCCTCTTGTAGCTGCAGATCAGACCTGCTCCAATGGGCTCTGCAAGAATAATTCATTGCCATTCAACAAATATGCATATCTAACAACGCACAATTCATTTGCCATTGAAGGAGAGCCCTCTCGCACCGGAGTTCCACGAGTTACACTTAACAATCAAGAGGACACCATCGCCCAACAGCTTAATAATGGAGTTAGAGGGTTTATGTTGGATACCTATGATTTTCTTGGAGATGAACCAGCACTAGACACATTGAAGGTGATAGAGGCATTCTTGGCAGCAAACACCAAAGAGATTGTCACATTGATCTTAGAAGACTATGTTCAATCTCCCAATGGACTGACCAAGGTATTCACCGAAGCCGGGCTCAAAAAATTCTGGTTTCCGATCACGAATATGCCGAAGGACAACGACGACTGGCCTCGAGTCAGTGACATGGTGGCAAACAACCAAAGGCTGCTGGTCTTCACATCAAACAGAGCCAAGGAAGCAACAGAAGGAATAGCATACCAATGGAATTACATGGTCGAAAATCAATATGGGAATGATGGAATGCAAGAAGGGAGCTGTCCAAAGAGGGCAGAATCATCAGCACTTGATGACAAGAGAAAATCACTGGTTTTGGTGAACTATTTCCCAACAGTTCCATTCAAAAGACAAGCTTGTGAGCATAACTCAGAGGATCTGGTTGGCATGCTTCAAACTTGTCATGGGGCAGCTGGTAACCGATGGGCTAACTTCGTGGCTCTTGATTTCTACAAGAGGAGCGATGGAGGTGGAGCCTTTCAAGCTTTGGACACTCTGAATGGGGAACTCTTGTGTGGGTCGACTGACATTCATTCATGTGTGGGTTGA
BLAST of CmoCh04G029380 vs. Swiss-Prot
Match: Y5713_ARATH (PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 2.7e-83 Identity = 146/282 (51.77%), Postives = 187/282 (66.31%), Query Frame = 1
BLAST of CmoCh04G029380 vs. TrEMBL
Match: A0A0A0KSH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G640590 PE=4 SV=1) HSP 1 Score: 476.1 bits (1224), Expect = 3.2e-131 Identity = 229/285 (80.35%), Postives = 246/285 (86.32%), Query Frame = 1
BLAST of CmoCh04G029380 vs. TrEMBL
Match: A0A059AD19_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_J01396 PE=4 SV=1) HSP 1 Score: 429.1 bits (1102), Expect = 4.5e-117 Identity = 204/284 (71.83%), Postives = 234/284 (82.39%), Query Frame = 1
BLAST of CmoCh04G029380 vs. TrEMBL
Match: A0A072TWA0_MEDTR (PLC-like phosphodiesterase superfamily protein OS=Medicago truncatula GN=MTR_7g015710 PE=4 SV=1) HSP 1 Score: 424.1 bits (1089), Expect = 1.4e-115 Identity = 218/352 (61.93%), Postives = 246/352 (69.89%), Query Frame = 1
BLAST of CmoCh04G029380 vs. TrEMBL
Match: A0A067GA90_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g045922mg PE=4 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 2.5e-115 Identity = 198/283 (69.96%), Postives = 230/283 (81.27%), Query Frame = 1
BLAST of CmoCh04G029380 vs. TrEMBL
Match: V4SYQ6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013394mg PE=4 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 2.5e-115 Identity = 198/283 (69.96%), Postives = 230/283 (81.27%), Query Frame = 1
BLAST of CmoCh04G029380 vs. TAIR10
Match: AT1G13680.1 (AT1G13680.1 PLC-like phosphodiesterases superfamily protein) HSP 1 Score: 361.3 bits (926), Expect = 5.8e-100 Identity = 176/283 (62.19%), Postives = 208/283 (73.50%), Query Frame = 1
BLAST of CmoCh04G029380 vs. TAIR10
Match: AT1G49740.1 (AT1G49740.1 PLC-like phosphodiesterases superfamily protein) HSP 1 Score: 337.8 bits (865), Expect = 6.9e-93 Identity = 163/288 (56.60%), Postives = 202/288 (70.14%), Query Frame = 1
BLAST of CmoCh04G029380 vs. TAIR10
Match: AT4G36945.1 (AT4G36945.1 PLC-like phosphodiesterases superfamily protein) HSP 1 Score: 334.3 bits (856), Expect = 7.6e-92 Identity = 165/288 (57.29%), Postives = 196/288 (68.06%), Query Frame = 1
BLAST of CmoCh04G029380 vs. TAIR10
Match: AT5G67130.1 (AT5G67130.1 PLC-like phosphodiesterases superfamily protein) HSP 1 Score: 310.1 bits (793), Expect = 1.5e-84 Identity = 146/282 (51.77%), Postives = 187/282 (66.31%), Query Frame = 1
BLAST of CmoCh04G029380 vs. TAIR10
Match: AT3G19310.1 (AT3G19310.1 PLC-like phosphodiesterases superfamily protein) HSP 1 Score: 308.9 bits (790), Expect = 3.4e-84 Identity = 149/288 (51.74%), Postives = 192/288 (66.67%), Query Frame = 1
BLAST of CmoCh04G029380 vs. NCBI nr
Match: gi|659118956|ref|XP_008459396.1| (PREDICTED: PI-PLC X domain-containing protein At5g67130 [Cucumis melo]) HSP 1 Score: 480.7 bits (1236), Expect = 1.9e-132 Identity = 246/358 (68.72%), Postives = 267/358 (74.58%), Query Frame = 1
BLAST of CmoCh04G029380 vs. NCBI nr
Match: gi|449447671|ref|XP_004141591.1| (PREDICTED: PI-PLC X domain-containing protein At5g67130 [Cucumis sativus]) HSP 1 Score: 476.1 bits (1224), Expect = 4.6e-131 Identity = 229/285 (80.35%), Postives = 246/285 (86.32%), Query Frame = 1
BLAST of CmoCh04G029380 vs. NCBI nr
Match: gi|658013011|ref|XP_008341801.1| (PREDICTED: PI-PLC X domain-containing protein At5g67130-like isoform X1 [Malus domestica]) HSP 1 Score: 434.1 bits (1115), Expect = 2.0e-118 Identity = 203/284 (71.48%), Postives = 232/284 (81.69%), Query Frame = 1
BLAST of CmoCh04G029380 vs. NCBI nr
Match: gi|694397047|ref|XP_009373787.1| (PREDICTED: PI-PLC X domain-containing protein At5g67130 [Pyrus x bretschneideri]) HSP 1 Score: 432.6 bits (1111), Expect = 5.8e-118 Identity = 203/284 (71.48%), Postives = 231/284 (81.34%), Query Frame = 1
BLAST of CmoCh04G029380 vs. NCBI nr
Match: gi|629085595|gb|KCW51952.1| (hypothetical protein EUGRSUZ_J01396, partial [Eucalyptus grandis]) HSP 1 Score: 429.1 bits (1102), Expect = 6.5e-117 Identity = 204/284 (71.83%), Postives = 234/284 (82.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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