CmoCh04G028670 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G028670
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionMatrix metalloproteinase
LocationCmo_Chr04 : 20392547 .. 20394171 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATTGATGTAGTTTGAATATCTCTAGTTTTTAGTCATCTTTGGTTGAGAGATGCTAATAATGGAGGCGGAGGGGGGGCTTCCTTAGGTAAATCATGTGAAGTTTTTCCTATTTTCTTCTCTCCATTCCATTCCATTTCATTTGTGTCACTTAAGCCTGTTCTTAGTTAGTGTTGGAGTCTTGAGAGATTAAAGAAAGTAGGTATGTATAACAAGACTCATTTAGTATATATATATATATATTTATGGGCTTATAAGTGAAAAATATAGTATCTATTGATATGAGACATTTTGAAAAAACTAAGAAAAACCACGAGAGCATATGCTTAGAGCAGATAATATCATGTCATTGTAGAGGGTAGTGGTTCTTTAACATGGTATTAGAGTCATGTCAGTAGAATACTCAAGTGTCGAACAAACCGTGTACTTTATTTAAGGGATCCACTTTGTTTGAGGGCTCCAGAAAAAGGAATCGAACCTTGATTAAGGGGATACTGTTCTATTTAGGCCTCAAGGGAGGCTCTATACCACGAAAGAGAATTATTGAGAGGGAAGTCCCATGTTGACTAATTAGTGGCTATTGTTTTGTTTTATTGCAAAATTTTGTCATAATTGGATAAAATTCTTGTTAATAATAGATTGTCCACGAGTGGGGGGAGACGAGGAAGCCTACACCAACTTCGTCCCTGTCTTTAATTCATTCTCTAATCTTAAGAAATTCTCCATTTATTTTCACAAACAAAAGTCTTCCCTACAACCATTTGTTGTATGCAACGTATTTGAGACTTTTGGTGCAATTTTTTGGTACCTCTGGCCTGTTATCTCTAAACAGACATCAAAATAAGCTTGGAAAGTGGTGAACATGGAGACGCAGAGGAGTCATAGCTCGTGCCTTTTCGCCCACACATGGACGTTTACATTTTGATGCCGTTGAGTCATGGGCTATTGGTGCGGTTCCTAATTCGTTTGATATGGAGACCGTGGCGTTGCATGAGATTGGACACCTTATGGGCCTTCACCACAGCTCAGTAGAAGGGGTTATTATGTGGCCAACCATCATGGGAGGAACTACCAAAGGTTTGCATGCCCACGACGTTGCAGCCATTAAGGCTTTATACAATGCTCTACTTCTTGACTTCTCTTTAATTTGGATCCAAAGTGTATTAGAATTGATGTGAGACTCGCGTCTACCTCTACCAGATATTGTTTTTTTTTTTCGAACTTTCCTCAAGATTTTTAAAACACGTCTGCGAGAGACAAATTTTTACTTTTATAAACAATGTTTCATTCTCCTACCAAACCGATGAGAGATCTCACAATCTATCCCTTTTGAAGTCCAATGTTTTCGTTGGCATTTATTTCTCTAGCCAATCGACGTAGAATCTAACAATCTGCATTCAATTTTTGTATGTTTGTTATTTTTTATTAAACTATTTGTATTTCAATCCATATAAATTTTGAATAATCGCACAAATTATAAATAATTAAATTTAGAATTAATTATAAATTTACACTCATCCCAAATTTAATTTGAAATTGATAAATCCTCGATTAGAATGTCACATTTCTTTATTATGAAAATTCCCAAATAATTATACTTAATTTTGTTAAATTCAGATATGA

mRNA sequence

ATGGGATTGATAGGAGTCATAGCTCGTGCCTTTTCGCCCACACATGGACGTTTACATTTTGATGCCGTTGAGTCATGGGCTATTGGTGCGGTTCCTAATTCGTTTGATATGGAGACCGTGGCGTTGCATGAGATTGGACACCTTATGGGCCTTCACCACAGCTCAGTAGAAGGGGTTATTATGTGGCCAACCATCATGGGAGGAACTACCAAAGGTTTGCATGCCCACGACATATGA

Coding sequence (CDS)

ATGGGATTGATAGGAGTCATAGCTCGTGCCTTTTCGCCCACACATGGACGTTTACATTTTGATGCCGTTGAGTCATGGGCTATTGGTGCGGTTCCTAATTCGTTTGATATGGAGACCGTGGCGTTGCATGAGATTGGACACCTTATGGGCCTTCACCACAGCTCAGTAGAAGGGGTTATTATGTGGCCAACCATCATGGGAGGAACTACCAAAGGTTTGCATGCCCACGACATATGA
Homology
[Close]
BLAST of CmoCh04G028670 vs. Swiss-Prot
Match: 2MMP_ARATH (Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana GN=2MMP PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 9.0e-15
Identity = 39/77 (50.65%), Postives = 51/77 (66.23%), Query Frame = 1 

Query: 2   GLIGVIARAFSPTHGRLHFDAVESWAIGAVPNSF-------DMETVALHEIGHLMGLHHS 61
           G++G +A AFSP  G+ H DA E+W +    +SF       D+E+VA+HEIGHL+GL HS
Sbjct: 232 GVLGTLAHAFSPPSGKFHLDADENWVVSGDLDSFLSVTAAVDLESVAVHEIGHLLGLGHS 291

Query: 62  SVEGVIMWPTIMGGTTK 72
           SVE  IM+PTI  G  K
Sbjct: 292 SVEESIMYPTITTGKRK 308

[Close]
BLAST of CmoCh04G028670 vs. Swiss-Prot
Match: 1MMP_ARATH (Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana GN=1MMP PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 5.9e-14
Identity = 35/75 (46.67%), Postives = 51/75 (68.00%), Query Frame = 1 

Query: 2   GLIGVIARAFSPTHGRLHFDAVESWAI-----GAVPNSFDMETVALHEIGHLMGLHHSSV 61
           G++G +A AF+P +GRLH DA E+W +     G+   + D+E+VA HEIGHL+GL HSS 
Sbjct: 229 GVLGTLAHAFAPENGRLHLDAAETWIVDDDLKGSSEVAVDLESVATHEIGHLLGLGHSSQ 288

Query: 62  EGVIMWPTIMGGTTK 72
           E  +M+P++   T K
Sbjct: 289 ESAVMYPSLRPRTKK 303

[Close]
BLAST of CmoCh04G028670 vs. Swiss-Prot
Match: 3MMP_ARATH (Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana GN=3MMP PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.8e-13
Identity = 37/78 (47.44%), Postives = 48/78 (61.54%), Query Frame = 1 

Query: 2   GLIGVIARAFSPTHGRLHFDAVESWAIG--------AVPNSFDMETVALHEIGHLMGLHH 61
           G +  +A AFSP  G  H D  E+W +         +V  + D+E+VA+HEIGHL+GL H
Sbjct: 236 GPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGFISVSEAVDLESVAVHEIGHLLGLGH 295

Query: 62  SSVEGVIMWPTIMGGTTK 72
           SSVEG IM+PTI  G  K
Sbjct: 296 SSVEGSIMYPTIRTGRRK 313

[Close]
BLAST of CmoCh04G028670 vs. Swiss-Prot
Match: 4MMP_ARATH (Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana GN=4MMP PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 6.5e-13
Identity = 33/68 (48.53%), Postives = 48/68 (70.59%), Query Frame = 1 

Query: 2   GLIGVIARAFSPTHGRLHFDAVESWAIGAVPN----SFDMETVALHEIGHLMGLHHSSVE 61
           G++GV+A  FSP +GRLH D  E+WA+         + D+E+VA+HEIGH++GL HSSV+
Sbjct: 207 GVLGVLAHTFSPENGRLHLDKAETWAVDFDEEKSSVAVDLESVAVHEIGHVLGLGHSSVK 266

Query: 62  GVIMWPTI 66
              M+PT+
Sbjct: 267 DAAMYPTL 274

[Close]
BLAST of CmoCh04G028670 vs. Swiss-Prot
Match: MEP1_SOYBN (Metalloendoproteinase 1 OS=Glycine max PE=1 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 6.5e-13
Identity = 38/79 (48.10%), Postives = 49/79 (62.03%), Query Frame = 1 

Query: 5   GVIARAFSPTHGRLHFDAVESWAIGA------VPNSFDMETVALHEIGHLMGLHHSSVEG 64
           G++  AF+PT GR HFDA E W          V ++FD+E+VA+HEIGHL+GL HSS   
Sbjct: 214 GILGHAFAPTDGRCHFDADEYWVASGDVTKSPVTSAFDLESVAVHEIGHLLGLGHSSDLR 273

Query: 65  VIMWPTIMGGTTKGLHAHD 78
            IM+P+I   T K   A D
Sbjct: 274 AIMYPSIPPRTRKVNLAQD 292

[Close]
BLAST of CmoCh04G028670 vs. TrEMBL
Match: A0A0A0KS47_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G633160 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.0e-29
Identity = 61/74 (82.43%), Postives = 66/74 (89.19%), Query Frame = 1 

Query: 5   GVIARAFSPTHGRLHFDAVESWAIGAVPNSFDMETVALHEIGHLMGLHHSSVEGVIMWPT 64
           GV+A AF+PT GRLHFDAVE WA GAVP S+DMETVALHEIGHL+GLHHSSVEG IMWP+
Sbjct: 230 GVLAHAFAPTDGRLHFDAVEHWADGAVPKSYDMETVALHEIGHLLGLHHSSVEGAIMWPS 289

Query: 65  IMGGTTKGLHAHDI 79
           IMGG TKGLHA DI
Sbjct: 290 IMGGATKGLHADDI 303

[Close]
BLAST of CmoCh04G028670 vs. TrEMBL
Match: A0A0A0KU08_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G632130 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.9e-25
Identity = 53/77 (68.83%), Postives = 65/77 (84.42%), Query Frame = 1 

Query: 2   GLIGVIARAFSPTHGRLHFDAVESWAIGAVPNSFDMETVALHEIGHLMGLHHSSVEGVIM 61
           G+ GVIA  F+P  GRLHFDA ESWA+GA+ +SFD+ET+ALHEIGHL+GL+HSS+E  IM
Sbjct: 230 GVRGVIAHGFAPRDGRLHFDAAESWAVGAIADSFDLETIALHEIGHLLGLYHSSIERAIM 289

Query: 62  WPTIMGGTTKGLHAHDI 79
           WP+IM G+TKGL A DI
Sbjct: 290 WPSIMEGSTKGLDADDI 306

[Close]
BLAST of CmoCh04G028670 vs. TrEMBL
Match: V4S9P8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012543mg PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.1e-24
Identity = 52/74 (70.27%), Postives = 62/74 (83.78%), Query Frame = 1 

Query: 5   GVIARAFSPTHGRLHFDAVESWAIGAVPNSFDMETVALHEIGHLMGLHHSSVEGVIMWPT 64
           G+IA AF+PT+GR H+DA E WA+GAV  +FD+ETVALHEIGHL+GLHHSSVEG IM+P+
Sbjct: 172 GIIAHAFAPTNGRFHYDADEPWAVGAVQGAFDLETVALHEIGHLLGLHHSSVEGAIMYPS 231

Query: 65  IMGGTTKGLHAHDI 79
           I  G TKGLH  DI
Sbjct: 232 ISAGVTKGLHGDDI 245

[Close]
BLAST of CmoCh04G028670 vs. TrEMBL
Match: A0A067DG72_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035681mg PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.1e-24
Identity = 52/74 (70.27%), Postives = 62/74 (83.78%), Query Frame = 1 

Query: 5   GVIARAFSPTHGRLHFDAVESWAIGAVPNSFDMETVALHEIGHLMGLHHSSVEGVIMWPT 64
           G+IA AF+PT+GR H+DA E WA+GAV  +FD+ETVALHEIGHL+GLHHSSVEG IM+P+
Sbjct: 238 GIIAHAFAPTNGRFHYDADEPWAVGAVQGAFDLETVALHEIGHLLGLHHSSVEGAIMYPS 297

Query: 65  IMGGTTKGLHAHDI 79
           I  G TKGLH  DI
Sbjct: 298 ISAGVTKGLHGDDI 311

[Close]
BLAST of CmoCh04G028670 vs. TrEMBL
Match: W9QPL8_9ROSA (Metalloendoproteinase 1 OS=Morus notabilis GN=L484_010516 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 6.3e-23
Identity = 54/77 (70.13%), Postives = 63/77 (81.82%), Query Frame = 1 

Query: 2   GLIGVIARAFSPTHGRLHFDAVESWAIGAVPNSFDMETVALHEIGHLMGLHHSSVEGVIM 61
           G  GV+A AFSPT GRLHFDA E+WAIG V ++FD+ETVALHEIGH++GL HSSVEG IM
Sbjct: 283 GAGGVLAHAFSPTDGRLHFDADETWAIGEVADAFDVETVALHEIGHILGLLHSSVEGAIM 342

Query: 62  WPTIMGGTTKGLHAHDI 79
           +P I  G TKGL+A DI
Sbjct: 343 YPQIGSGLTKGLNADDI 359

[Close]
BLAST of CmoCh04G028670 vs. TAIR10
Match: AT1G70170.1 (AT1G70170.1 matrix metalloproteinase)

HSP 1 Score: 80.5 bits (197), Expect = 5.1e-16
Identity = 39/77 (50.65%), Postives = 51/77 (66.23%), Query Frame = 1 

Query: 2   GLIGVIARAFSPTHGRLHFDAVESWAIGAVPNSF-------DMETVALHEIGHLMGLHHS 61
           G++G +A AFSP  G+ H DA E+W +    +SF       D+E+VA+HEIGHL+GL HS
Sbjct: 232 GVLGTLAHAFSPPSGKFHLDADENWVVSGDLDSFLSVTAAVDLESVAVHEIGHLLGLGHS 291

Query: 62  SVEGVIMWPTIMGGTTK 72
           SVE  IM+PTI  G  K
Sbjct: 292 SVEESIMYPTITTGKRK 308

[Close]
BLAST of CmoCh04G028670 vs. TAIR10
Match: AT4G16640.1 (AT4G16640.1 Matrixin family protein)

HSP 1 Score: 77.8 bits (190), Expect = 3.3e-15
Identity = 35/75 (46.67%), Postives = 51/75 (68.00%), Query Frame = 1 

Query: 2   GLIGVIARAFSPTHGRLHFDAVESWAI-----GAVPNSFDMETVALHEIGHLMGLHHSSV 61
           G++G +A AF+P +GRLH DA E+W +     G+   + D+E+VA HEIGHL+GL HSS 
Sbjct: 229 GVLGTLAHAFAPENGRLHLDAAETWIVDDDLKGSSEVAVDLESVATHEIGHLLGLGHSSQ 288

Query: 62  EGVIMWPTIMGGTTK 72
           E  +M+P++   T K
Sbjct: 289 ESAVMYPSLRPRTKK 303

[Close]
BLAST of CmoCh04G028670 vs. TAIR10
Match: AT1G24140.1 (AT1G24140.1 Matrixin family protein)

HSP 1 Score: 75.1 bits (183), Expect = 2.1e-14
Identity = 37/78 (47.44%), Postives = 48/78 (61.54%), Query Frame = 1 

Query: 2   GLIGVIARAFSPTHGRLHFDAVESWAIG--------AVPNSFDMETVALHEIGHLMGLHH 61
           G +  +A AFSP  G  H D  E+W +         +V  + D+E+VA+HEIGHL+GL H
Sbjct: 236 GPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGFISVSEAVDLESVAVHEIGHLLGLGH 295

Query: 62  SSVEGVIMWPTIMGGTTK 72
           SSVEG IM+PTI  G  K
Sbjct: 296 SSVEGSIMYPTIRTGRRK 313

[Close]
BLAST of CmoCh04G028670 vs. TAIR10
Match: AT2G45040.1 (AT2G45040.1 Matrixin family protein)

HSP 1 Score: 74.3 bits (181), Expect = 3.7e-14
Identity = 33/68 (48.53%), Postives = 48/68 (70.59%), Query Frame = 1 

Query: 2   GLIGVIARAFSPTHGRLHFDAVESWAIGAVPN----SFDMETVALHEIGHLMGLHHSSVE 61
           G++GV+A  FSP +GRLH D  E+WA+         + D+E+VA+HEIGH++GL HSSV+
Sbjct: 207 GVLGVLAHTFSPENGRLHLDKAETWAVDFDEEKSSVAVDLESVAVHEIGHVLGLGHSSVK 266

Query: 62  GVIMWPTI 66
              M+PT+
Sbjct: 267 DAAMYPTL 274

[Close]
BLAST of CmoCh04G028670 vs. TAIR10
Match: AT1G59970.1 (AT1G59970.1 Matrixin family protein)

HSP 1 Score: 73.2 bits (178), Expect = 8.1e-14
Identity = 38/79 (48.10%), Postives = 45/79 (56.96%), Query Frame = 1 

Query: 2   GLIGVIARAFSPTHGRLHFDAVESWAIG---------AVPNSFDMETVALHEIGHLMGLH 61
           G +G +A A SP  G LH D  E W I           V    D+E+VA+HEIGHL+GL 
Sbjct: 220 GAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRRILPVTTVVDLESVAVHEIGHLLGLG 279

Query: 62  HSSVEGVIMWPTIMGGTTK 72
           HSSVE  IM+P I GG  K
Sbjct: 280 HSSVEDAIMFPAISGGDRK 298

[Close]
BLAST of CmoCh04G028670 vs. NCBI nr
Match: gi|659117646|ref|XP_008458713.1| (PREDICTED: metalloendoproteinase 1-like [Cucumis melo])

HSP 1 Score: 140.2 bits (352), Expect = 1.5e-30
Identity = 63/74 (85.14%), Postives = 68/74 (91.89%), Query Frame = 1 

Query: 5   GVIARAFSPTHGRLHFDAVESWAIGAVPNSFDMETVALHEIGHLMGLHHSSVEGVIMWPT 64
           GV+A AF+PT GRLHFDAVE WA GAVPNS+DMETVALHEIGHL+GLHHSSVEG IMWP+
Sbjct: 199 GVLAHAFAPTDGRLHFDAVEHWADGAVPNSYDMETVALHEIGHLLGLHHSSVEGAIMWPS 258

Query: 65  IMGGTTKGLHAHDI 79
           IMGGTTKGLHA DI
Sbjct: 259 IMGGTTKGLHADDI 272

[Close]
BLAST of CmoCh04G028670 vs. NCBI nr
Match: gi|449449409|ref|XP_004142457.1| (PREDICTED: metalloendoproteinase 1-like [Cucumis sativus])

HSP 1 Score: 136.0 bits (341), Expect = 2.9e-29
Identity = 61/74 (82.43%), Postives = 66/74 (89.19%), Query Frame = 1 

Query: 5   GVIARAFSPTHGRLHFDAVESWAIGAVPNSFDMETVALHEIGHLMGLHHSSVEGVIMWPT 64
           GV+A AF+PT GRLHFDAVE WA GAVP S+DMETVALHEIGHL+GLHHSSVEG IMWP+
Sbjct: 230 GVLAHAFAPTDGRLHFDAVEHWADGAVPKSYDMETVALHEIGHLLGLHHSSVEGAIMWPS 289

Query: 65  IMGGTTKGLHAHDI 79
           IMGG TKGLHA DI
Sbjct: 290 IMGGATKGLHADDI 303

[Close]
BLAST of CmoCh04G028670 vs. NCBI nr
Match: gi|659118019|ref|XP_008458907.1| (PREDICTED: metalloendoproteinase 1-like [Cucumis melo])

HSP 1 Score: 132.9 bits (333), Expect = 2.5e-28
Identity = 60/77 (77.92%), Postives = 68/77 (88.31%), Query Frame = 1 

Query: 2   GLIGVIARAFSPTHGRLHFDAVESWAIGAVPNSFDMETVALHEIGHLMGLHHSSVEGVIM 61
           G+ GVIA  F+PT GRLHFDA+ESWA+GAV +SFD+ETVALHEIGHL+GLHHSSVEG IM
Sbjct: 230 GVGGVIAHGFAPTDGRLHFDAIESWAVGAVADSFDLETVALHEIGHLLGLHHSSVEGAIM 289

Query: 62  WPTIMGGTTKGLHAHDI 79
           WP+IM GTTKGL A DI
Sbjct: 290 WPSIMEGTTKGLDADDI 306

[Close]
BLAST of CmoCh04G028670 vs. NCBI nr
Match: gi|449449417|ref|XP_004142461.1| (PREDICTED: metalloendoproteinase 1-like [Cucumis sativus])

HSP 1 Score: 121.7 bits (304), Expect = 5.7e-25
Identity = 53/77 (68.83%), Postives = 65/77 (84.42%), Query Frame = 1 

Query: 2   GLIGVIARAFSPTHGRLHFDAVESWAIGAVPNSFDMETVALHEIGHLMGLHHSSVEGVIM 61
           G+ GVIA  F+P  GRLHFDA ESWA+GA+ +SFD+ET+ALHEIGHL+GL+HSS+E  IM
Sbjct: 230 GVRGVIAHGFAPRDGRLHFDAAESWAVGAIADSFDLETIALHEIGHLLGLYHSSIERAIM 289

Query: 62  WPTIMGGTTKGLHAHDI 79
           WP+IM G+TKGL A DI
Sbjct: 290 WPSIMEGSTKGLDADDI 306

[Close]
BLAST of CmoCh04G028670 vs. NCBI nr
Match: gi|641813496|gb|KDO37621.1| (hypothetical protein CISIN_1g035681mg [Citrus sinensis])

HSP 1 Score: 120.2 bits (300), Expect = 1.6e-24
Identity = 52/74 (70.27%), Postives = 62/74 (83.78%), Query Frame = 1 

Query: 5   GVIARAFSPTHGRLHFDAVESWAIGAVPNSFDMETVALHEIGHLMGLHHSSVEGVIMWPT 64
           G+IA AF+PT+GR H+DA E WA+GAV  +FD+ETVALHEIGHL+GLHHSSVEG IM+P+
Sbjct: 238 GIIAHAFAPTNGRFHYDADEPWAVGAVQGAFDLETVALHEIGHLLGLHHSSVEGAIMYPS 297

Query: 65  IMGGTTKGLHAHDI 79
           I  G TKGLH  DI
Sbjct: 298 ISAGVTKGLHGDDI 311

The following BLAST results are available for this feature:
BLAST of CmoCh04G028670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
2MMP_ARATH9.0e-1550.65Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana GN=2MMP PE=1 SV=1[more]
1MMP_ARATH5.9e-1446.67Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana GN=1MMP PE=1 SV=1[more]
3MMP_ARATH3.8e-1347.44Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana GN=3MMP PE=1 SV=1[more]
4MMP_ARATH6.5e-1348.53Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana GN=4MMP PE=1 SV=1[more]
MEP1_SOYBN6.5e-1348.10Metalloendoproteinase 1 OS=Glycine max PE=1 SV=2[more]
BLAST of CmoCh04G028670 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KS47_CUCSA2.0e-2982.43Uncharacterized protein OS=Cucumis sativus GN=Csa_5G633160 PE=3 SV=1[more]
A0A0A0KU08_CUCSA3.9e-2568.83Uncharacterized protein OS=Cucumis sativus GN=Csa_5G632130 PE=3 SV=1[more]
V4S9P8_9ROSI1.1e-2470.27Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012543mg PE=3 SV=1[more]
A0A067DG72_CITSI1.1e-2470.27Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035681mg PE=3 SV=1[more]
W9QPL8_9ROSA6.3e-2370.13Metalloendoproteinase 1 OS=Morus notabilis GN=L484_010516 PE=3 SV=1[more]
BLAST of CmoCh04G028670 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G70170.15.1e-1650.65 matrix metalloproteinase[more]
AT4G16640.13.3e-1546.67 Matrixin family protein[more]
AT1G24140.12.1e-1447.44 Matrixin family protein[more]
AT2G45040.13.7e-1448.53 Matrixin family protein[more]
AT1G59970.18.1e-1448.10 Matrixin family protein[more]
BLAST of CmoCh04G028670 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659117646|ref|XP_008458713.1|1.5e-3085.14PREDICTED: metalloendoproteinase 1-like [Cucumis melo][more]
gi|449449409|ref|XP_004142457.1|2.9e-2982.43PREDICTED: metalloendoproteinase 1-like [Cucumis sativus][more]
gi|659118019|ref|XP_008458907.1|2.5e-2877.92PREDICTED: metalloendoproteinase 1-like [Cucumis melo][more]
gi|449449417|ref|XP_004142461.1|5.7e-2568.83PREDICTED: metalloendoproteinase 1-like [Cucumis sativus][more]
gi|641813496|gb|KDO37621.1|1.6e-2470.27hypothetical protein CISIN_1g035681mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001818Pept_M10_metallopeptidase
IPR024079MetalloPept_cat_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008270zinc ion binding
GO:0008237metallopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Cellular Component
TermDefinition
GO:0031012extracellular matrix
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0031012 extracellular matrix
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008237 metallopeptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G028670.1CmoCh04G028670.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001818Peptidase M10, metallopeptidasePFAMPF00413Peptidase_M10coord: 5..78
score: 9.3
IPR024079Metallopeptidase, catalytic domainGENE3DG3DSA:3.40.390.10coord: 5..78
score: 5.0
NoneNo IPR availablePANTHERPTHR10201MATRIX METALLOPROTEINASEcoord: 2..78
score: 7.4
NoneNo IPR availablePANTHERPTHR10201:SF140F20P5.11 PROTEINcoord: 2..78
score: 7.4
NoneNo IPR availableunknownSSF55486Metalloproteases ("zincins"), catalytic domaincoord: 2..78
score: 1.05

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G028670Silver-seed gourdcarcmoB0370
CmoCh04G028670Silver-seed gourdcarcmoB0501
CmoCh04G028670Silver-seed gourdcarcmoB0940
CmoCh04G028670Silver-seed gourdcarcmoB1354
CmoCh04G028670Cucumber (Chinese Long) v3cmocucB0802
CmoCh04G028670Cucumber (Chinese Long) v3cmocucB0824
CmoCh04G028670Cucumber (Chinese Long) v3cmocucB0846
CmoCh04G028670Watermelon (97103) v2cmowmbB685
CmoCh04G028670Watermelon (97103) v2cmowmbB772
CmoCh04G028670Wax gourdcmowgoB0836
CmoCh04G028670Cucurbita moschata (Rifu)cmocmoB123
CmoCh04G028670Cucurbita moschata (Rifu)cmocmoB185
CmoCh04G028670Cucurbita moschata (Rifu)cmocmoB261
CmoCh04G028670Cucumber (Gy14) v1cgycmoB0207
CmoCh04G028670Cucumber (Gy14) v1cgycmoB0442
CmoCh04G028670Cucumber (Gy14) v1cgycmoB0939
CmoCh04G028670Cucurbita maxima (Rimu)cmacmoB158
CmoCh04G028670Cucurbita maxima (Rimu)cmacmoB308
CmoCh04G028670Cucurbita maxima (Rimu)cmacmoB729
CmoCh04G028670Wild cucumber (PI 183967)cmocpiB690
CmoCh04G028670Wild cucumber (PI 183967)cmocpiB705
CmoCh04G028670Wild cucumber (PI 183967)cmocpiB722
CmoCh04G028670Cucumber (Chinese Long) v2cmocuB680
CmoCh04G028670Cucumber (Chinese Long) v2cmocuB695
CmoCh04G028670Cucumber (Chinese Long) v2cmocuB714
CmoCh04G028670Melon (DHL92) v3.5.1cmomeB624
CmoCh04G028670Melon (DHL92) v3.5.1cmomeB660
CmoCh04G028670Melon (DHL92) v3.5.1cmomeB677
CmoCh04G028670Watermelon (Charleston Gray)cmowcgB608
CmoCh04G028670Watermelon (97103) v1cmowmB646
CmoCh04G028670Cucurbita pepo (Zucchini)cmocpeB657
CmoCh04G028670Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G028670Cucurbita pepo (Zucchini)cmocpeB696
CmoCh04G028670Cucurbita pepo (Zucchini)cmocpeB704
CmoCh04G028670Bottle gourd (USVL1VR-Ls)cmolsiB640
CmoCh04G028670Bottle gourd (USVL1VR-Ls)cmolsiB641
CmoCh04G028670Bottle gourd (USVL1VR-Ls)cmolsiB647
CmoCh04G028670Cucumber (Gy14) v2cgybcmoB122
CmoCh04G028670Cucumber (Gy14) v2cgybcmoB395
CmoCh04G028670Cucumber (Gy14) v2cgybcmoB625
CmoCh04G028670Melon (DHL92) v3.6.1cmomedB713
CmoCh04G028670Melon (DHL92) v3.6.1cmomedB747
CmoCh04G028670Melon (DHL92) v3.6.1cmomedB766