CmoCh04G028370 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G028370
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr04 : 20285686 .. 20288705 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCCGAATTAAATACCGGAATCCCATCCCTACTGGTAGGTCTCAAACGGAAGAAAGAAGGAAAAAAAAAAAAAACTACATGGAAATATTATATATATATATATATATATATATATATATATATATATATATATATATATATAACCCAACTAGGGTAAATATCTAATATATTCTTAAATTTTAAAAATATTTAATATTTTAAAATTTTATATGGGGAGTCGATTAAATAAATATGTAACTTTATATCTCAGACATAACATGTAAACAATTTTTTTTATTTTTGGTAATTGTAATAATATTTACTAAGTCTTTTTTTCATACATATTGTCACACACTATACTTAACTACAAATGCGTAAAGGAGGAGTACATCATATAAACGAGAGTAGCGATCCTGATGATAAAATGATTAATAAAGATTTAAAAAAAATGAAAGTCACTAACTATACCAATAAGATGCATTTTCCTTCTCGATGGCTAAATTATAAAAACTTTATAGTTAAACGTGCTCTCCACTTTTGAAGAAGCAAAGAATAAGTAATATGACTATATGGTAGGGGAATGTCGAGGCACACAGATTTAGTCATCAGACTTAGTGGACAGATGTTCATTGTATTATAATTTAATGATCAAAGATAAGAAGTTTAACTTTTAATTATTACGCATAAACGGTTTGTTTCATTAAATTGTAACGTATGGAAGGAGTTAAAAGATTAATAAAATGATACCCACTTTAGCAACCTTCCATTTTTAAGCTAATTGAACCAAAAACCAACTTACAAGTATAGACTGATGGTCCATAGAAAGCAAGTTTAAGTAATTTCTTTAAAAAAAGAAAAAAATTGTATAAACATGTGAGTGTCCAAAAACTCGCCGATCTGGAAAACCGAGTGCCGATATTTTCAACCGCTGAATTCAGAAGCGCTGTGCCCCTGGGGCCCTACCTTCCCAGCTCGATTATTGTTGTTTTTATTTAATTACTTCATTTATTTCATATCTCTTCTTTCTCTTAAAAACCCAATTCATTTGCATCAAATCAAAGTCGCCTCCATTCATATTTTCTGGAATTATTATTAAATTCCAGAAATAATTAATTGATTTTTTTTTTTTTTTTTTCTTTCTAATAGCGGCGACGGCGAGAGATTCGATCACGGGAACTCGGGCTGGATAATTAGTTGGATGCAGAGGAAAAAAATAAAAAAAGAAAAAGAAATTTGTTACTGGAAAGCCCAAATCTGAACCTTCATCGTCAATCTCCATTTGGACTGCAACCTGAAATCCATCTCGATTCACTTGTCTGTGTGCTTCTTCTACATCTATTTTCGTTTGGATTTCGATTTTAGCTTCCTGGCCTAACCCTAGGTACGTTTGACATTGTCGGAAAGTCAATTTCTGTGGTATTTTATCCTCATCTGATTATAATCTTCATCTGTTTATTCCAACCTGTTGTTGAGTTTGTTTTTTGTTCGTTTTAGCTGCTTTTTCTTGTGTAATATGTGTTTGTTTGTACTTTGTATTAAAGGAATTATAGCGCTAGTTGCTGTGTAGTGTTAATTGTGCATCGTGGAGTTTGAATTTTGTTGGTTGTTGATTGAAGTTGAACTTCGTTGGGTTGTGGCATTTAAATGTGATTTTTGGATTGGGGAATTGGGTTTTTTTTTTTTTTTTTTGTGTAAATTTGTGGTTTGAAGATTTGGAAATTGGAAGTATAGTCTTTGTCGAAATTTTATTCATTTCTATGGTTGTGCTACCGGTAGTATGTATTTACTCGTTAGTTATTTTGAAAATCTAGGTTTGGGTTAGGGGCCATGGCCGAATTAGCATCTTAATTCTTGTAGCGTGCTTTTAGAGAGCGTGTCGGAGTAGTCAGTTCATGTCTTAGTCTGCTTCTTGTCTCTTTCATGAGATAACCAAGAAGGATTAAGCGTTTTTCTCCTTTTTTTTCCCTGCGTATTGTAATTAATATGAAATGAATGAAAAGGGGGTTCTTTCCCGAGATCAGTTCTTGCCATTTCATTTTGATAGGAGAAACGAACGGGCTTTAGTTGCGAACTGAAATCAGATCTCTGATTGACTGAAGTCGAAAAAAAGCCTATTTGGGGGAAGAGGCCAATTCTCATTTTGTCTAACTTTGCTAATGAAGAGATGTGGAAAGTGGCCTATCAACCAATGAGAATTATTTGGACAAGTATTTGACGATTAAGATTCGTTAGAAAGTATTTTGATCCCAGAGATTTGGGCCGAAGATCAGCACAAATTTTGTCTTCTTTGGTTGGTGGTGGATGGAGAATTAGAAAAAGCATTCTTTAACACCTTCAGTTAACAATGGAAGAATATAAAAAGAGGGATAGGGTTGTTAGTGAAATCAGAGAAACTTTTTGGGATTGGGCATTTTGGTCTTGGATCTTTGGGCTTTACAATGTAAGAAAGAAATTACACTTGAGCTGTATGATTTGGGCTTAGTTATGAGGATCCACTTTCAACTTAAGCGGGAATTTAGCAACCCAATATACTACCAAAGGTTTGAATGAAGTTGAGGTTTCCACTTTCCAGGTGAGATGGATGCTTTTGGAGGGCGTGTAGTGAATGTAAAACTACGGAATCTTCCTAAGCAGGCAAACATACCAGGAAGGGTGGAACTGGGTGGGTTTCCAAGAAGGATGGAAGTTTAGGAGTTTGTGTTGGAAGCTTTGTTGAATTTGCTGCCTTTCTTTTCCTTCTGAGTTTGTTATCAAACTTGTTCCTTTTCCCTCTATAATGTCTAACTATTCATCCTGTTTGTATGTGCAGAATTTTTTTCAGTGGTCTTGGGAGCTTTGTTGGTTGTTTGCTGGTAGATGGTCTTAGAATTTAACGTGCTCGAGGCTAAAGAGATGGGTTGCTTATTGATATCAAATTTTTGGAGTTCATTGGATATGCTCATTTTCCATTTGTCTTGATGCAGTTACAACTTATTTACAGTGTCCTGCTGATCAGAGAAAAATGCTATCAAAATGGAAGATTCCTTACATGGGTTTGA

mRNA sequence

ATGATCCGAATTAAATACCGGAATCCCATCCCTACTGCTTCCTGGCCTAACCCTAGAATTTTTTTCAGTGGTCTTGGGAGCTTTGTTGGTTGTTTGCTGTTCATTGGATATGCTCATTTTCCATTTGTCTTGATGCAGTTACAACTTATTTACAGTGTCCTGCTGATCAGAGAAAAATGCTATCAAAATGGAAGATTCCTTACATGGGTTTGA

Coding sequence (CDS)

ATGATCCGAATTAAATACCGGAATCCCATCCCTACTGCTTCCTGGCCTAACCCTAGAATTTTTTTCAGTGGTCTTGGGAGCTTTGTTGGTTGTTTGCTGTTCATTGGATATGCTCATTTTCCATTTGTCTTGATGCAGTTACAACTTATTTACAGTGTCCTGCTGATCAGAGAAAAATGCTATCAAAATGGAAGATTCCTTACATGGGTTTGA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G028370.1CmoCh04G028370.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..31
score:

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G028370Cucurbita moschata (Rifu)cmocmoB073
CmoCh04G028370Cucurbita moschata (Rifu)cmocmoB122
CmoCh04G028370Cucurbita moschata (Rifu)cmocmoB123
CmoCh04G028370Cucurbita moschata (Rifu)cmocmoB185
CmoCh04G028370Cucurbita moschata (Rifu)cmocmoB220
CmoCh04G028370Cucurbita moschata (Rifu)cmocmoB261
CmoCh04G028370Cucumber (Gy14) v1cgycmoB0207
CmoCh04G028370Cucumber (Gy14) v1cgycmoB0544
CmoCh04G028370Cucumber (Gy14) v1cgycmoB0939
CmoCh04G028370Cucurbita maxima (Rimu)cmacmoB157
CmoCh04G028370Cucurbita maxima (Rimu)cmacmoB266
CmoCh04G028370Cucurbita maxima (Rimu)cmacmoB308
CmoCh04G028370Cucurbita maxima (Rimu)cmacmoB729
CmoCh04G028370Wild cucumber (PI 183967)cmocpiB690
CmoCh04G028370Wild cucumber (PI 183967)cmocpiB705
CmoCh04G028370Wild cucumber (PI 183967)cmocpiB724
CmoCh04G028370Cucumber (Chinese Long) v2cmocuB695
CmoCh04G028370Cucumber (Chinese Long) v2cmocuB716
CmoCh04G028370Melon (DHL92) v3.5.1cmomeB624
CmoCh04G028370Melon (DHL92) v3.5.1cmomeB660
CmoCh04G028370Melon (DHL92) v3.5.1cmomeB677
CmoCh04G028370Watermelon (Charleston Gray)cmowcgB608
CmoCh04G028370Watermelon (Charleston Gray)cmowcgB611
CmoCh04G028370Watermelon (97103) v1cmowmB646
CmoCh04G028370Watermelon (97103) v1cmowmB650
CmoCh04G028370Cucurbita pepo (Zucchini)cmocpeB657
CmoCh04G028370Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G028370Cucurbita pepo (Zucchini)cmocpeB696
CmoCh04G028370Cucurbita pepo (Zucchini)cmocpeB701
CmoCh04G028370Cucurbita pepo (Zucchini)cmocpeB704
CmoCh04G028370Bottle gourd (USVL1VR-Ls)cmolsiB640
CmoCh04G028370Bottle gourd (USVL1VR-Ls)cmolsiB641
CmoCh04G028370Bottle gourd (USVL1VR-Ls)cmolsiB647
CmoCh04G028370Bottle gourd (USVL1VR-Ls)cmolsiB688
CmoCh04G028370Cucumber (Gy14) v2cgybcmoB121
CmoCh04G028370Cucumber (Gy14) v2cgybcmoB122
CmoCh04G028370Cucumber (Gy14) v2cgybcmoB395
CmoCh04G028370Cucumber (Gy14) v2cgybcmoB626
CmoCh04G028370Melon (DHL92) v3.6.1cmomedB713
CmoCh04G028370Melon (DHL92) v3.6.1cmomedB747
CmoCh04G028370Melon (DHL92) v3.6.1cmomedB766
CmoCh04G028370Silver-seed gourdcarcmoB0370
CmoCh04G028370Silver-seed gourdcarcmoB0501
CmoCh04G028370Silver-seed gourdcarcmoB0506
CmoCh04G028370Silver-seed gourdcarcmoB0593
CmoCh04G028370Silver-seed gourdcarcmoB0940
CmoCh04G028370Silver-seed gourdcarcmoB1354
CmoCh04G028370Cucumber (Chinese Long) v3cmocucB0801
CmoCh04G028370Cucumber (Chinese Long) v3cmocucB0802
CmoCh04G028370Cucumber (Chinese Long) v3cmocucB0824
CmoCh04G028370Cucumber (Chinese Long) v3cmocucB0848
CmoCh04G028370Watermelon (97103) v2cmowmbB685
CmoCh04G028370Watermelon (97103) v2cmowmbB772
CmoCh04G028370Wax gourdcmowgoB0812
CmoCh04G028370Wax gourdcmowgoB0836