CmoCh04G027750 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G027750
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	(Calcium-dependent lipid-binding domain-containing protein) (Elicitor responsive/phloem-like protein)
Location	Cmo_Chr04 : 20030569 .. 20031449 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAGATAAAATTTTAAATCTAAATTAAAAAGTTAGTAGAAGGCAGGCAGACACCTTTGTCGTGGAGCTGCGTGTGCGACAGTAGCAGCAGCAGCAGTGGCGGGTCATCTATATAAACGCACTGCACCTTTGTATTCCTTCAACTTCATCTTCAAGCTTGACAGACAGAGGCAAAGCAATGGGGATGGGAATGTTGGAGGTCCATTTGATTAGTGGTAAAGGACTTCAAGCCCATGATCCGCTTAATAGTAAGCTCCAATCTGCGGTTCCTACTTGCTTTGATGCTCTGCCTATGCTCTTACTTACTTCTTAACCTATTCCATTTTCTCCCCATTTCGCAGAACCAATTGACCCTTATGCTGAGATCAACTACAAGGGCCAAGAACGCATGAGCAAAGTTGCTAAAAGTTAGTCTCTCCTTTTTCTTTCCGACCTCTAAAATTTTATAAATTAATATCATTCTTATTCGTGTGGTTTTAAATGGCGCAGATGCAGGACCAGATCCATTATGGGATGAGAAATTTAAATTCCTAGCAGAGTACCCTGGGAGCGGCGGTGACTTCCATATCTTCTTCAAGGTCATGGACCATGACGCTATAGATGATGATGATTTGATTGGCGAAGTCAAGTAAGACCATTGTGATTTTCTCAAACATAACTACTACTATTATTACTATCACCACCACATTCAAAGTTTACGAAAGATGGAACTAAATGACTGTTGTAGAATAGATATCAAGGATTTATTAGCGGAAGGAGTTAGAAAAGGATGGTCGAAGATACCGCCTAGAATGTACCAGGTTTTATTACTCAATCTTTACTTCAAGGGAGAAATTGAAGTTGGAGTGTCCTTCCAGCGGCAGGTAATGGAGCATGTTTAG

mRNA sequence

ATTAGATAAAATTTTAAATCTAAATTAAAAAGTTAGTAGAAGGCAGGCAGACACCTTTGTCGTGGAGCTGCGTGTGCGACAGTAGCAGCAGCAGCAGTGGCGGGTCATCTATATAAACGCACTGCACCTTTGTATTCCTTCAACTTCATCTTCAAGCTTGACAGACAGAGGCAAAGCAATGGGGATGGGAATGTTGGAGGTCCATTTGATTAGTGGTAAAGGACTTCAAGCCCATGATCCGCTTAATAAACCAATTGACCCTTATGCTGAGATCAACTACAAGGGCCAAGAACGCATGAGCAAAGTTGCTAAAAATGCAGGACCAGATCCATTATGGGATGAGAAATTTAAATTCCTAGCAGAGTACCCTGGGAGCGGCGGTGACTTCCATATCTTCTTCAAGGTCATGGACCATGACGCTATAGATGATGATGATTTGATTGGCGAAGTCAAAATAGATATCAAGGATTTATTAGCGGAAGGAGTTAGAAAAGGATGGTCGAAGATACCGCCTAGAATGTACCAGGTTTTATTACTCAATCTTTACTTCAAGGGAGAAATTGAAGTTGGAGTGTCCTTCCAGCGGCAGGTAATGGAGCATGTTTAG

Coding sequence (CDS)

ATGGGGATGGGAATGTTGGAGGTCCATTTGATTAGTGGTAAAGGACTTCAAGCCCATGATCCGCTTAATAAACCAATTGACCCTTATGCTGAGATCAACTACAAGGGCCAAGAACGCATGAGCAAAGTTGCTAAAAATGCAGGACCAGATCCATTATGGGATGAGAAATTTAAATTCCTAGCAGAGTACCCTGGGAGCGGCGGTGACTTCCATATCTTCTTCAAGGTCATGGACCATGACGCTATAGATGATGATGATTTGATTGGCGAAGTCAAAATAGATATCAAGGATTTATTAGCGGAAGGAGTTAGAAAAGGATGGTCGAAGATACCGCCTAGAATGTACCAGGTTTTATTACTCAATCTTTACTTCAAGGGAGAAATTGAAGTTGGAGTGTCCTTCCAGCGGCAGGTAATGGAGCATGTTTAG

Homology

[Close]

BLAST of CmoCh04G027750 vs. Swiss-Prot
Match: PP16B_CUCMA (16 kDa phloem protein 2 OS=Cucurbita maxima GN=PP16-2 PE=1 SV=3)

HSP 1 Score: 256.5 bits (654), Expect = 1.7e-67
Identity = 118/137 (86.13%), Postives = 129/137 (94.16%), Query Frame = 1


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           MGMGM+EVHLISGKGLQAHDPLNKPIDPYAEIN+KGQERMSKVAKNAGPDP+W+EKFKFL
Sbjct: 1   MGMGMMEVHLISGKGLQAHDPLNKPIDPYAEINFKGQERMSKVAKNAGPDPIWNEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
            EYPGSGGDFHI FKVMDHDAID DD IG+VKID+++LLAEGVRKGWS++PPRMYQVL  
Sbjct: 61  VEYPGSGGDFHILFKVMDHDAIDGDDYIGDVKIDVQNLLAEGVRKGWSELPPRMYQVLAH 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
            +YFKGEIEVGV FQRQ
Sbjct: 121 KIYFKGEIEVGVFFQRQ 137

[Close]

BLAST of CmoCh04G027750 vs. Swiss-Prot
Match: PP16A_CUCMA (16 kDa phloem protein 1 OS=Cucurbita maxima GN=PP16-1 PE=1 SV=3)

HSP 1 Score: 248.8 bits (634), Expect = 3.5e-65
Identity = 117/137 (85.40%), Postives = 128/137 (93.43%), Query Frame = 1


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           MGMGM+EVHLISGKGLQAHDPLNKPIDPYAEIN+KGQERMSKVAKNAGP+PLWDEKFKFL
Sbjct: 1   MGMGMMEVHLISGKGLQAHDPLNKPIDPYAEINFKGQERMSKVAKNAGPNPLWDEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
           AEYPGSGGDFHI FKVMDHDAID DD IG+VKID+K+LLAEGVRKG S++PPRMY VL  
Sbjct: 61  AEYPGSGGDFHILFKVMDHDAIDGDDYIGDVKIDVKNLLAEGVRKGKSEMPPRMYHVLAH 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
            ++FKGEIEVGVSF+ Q
Sbjct: 121 KIHFKGEIEVGVSFKLQ 137

[Close]

BLAST of CmoCh04G027750 vs. Swiss-Prot
Match: ERG1_ORYSJ (Elicitor-responsive protein 1 OS=Oryza sativa subsp. japonica GN=ERG1 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.3e-23
Identity = 52/135 (38.52%), Postives = 81/135 (60.00%), Query Frame = 1


Query: 2   GMGMLEVHLISGKGLQAHDPLNK--PIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKF 61
           G G+LEVHL+  KGL  +D L +   IDPY  + Y+ QER S VA++ G +P W+E FKF
Sbjct: 3   GSGVLEVHLVDAKGLTGNDFLGEIGKIDPYVVVQYRSQERKSSVARDQGKNPSWNEVFKF 62

Query: 62  LAEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLL 121
                 + G   +F ++MDHD    DD +GE  I++ DL++ G+  G  ++    ++V+L
Sbjct: 63  QINSTAATGQHKLFLRLMDHDTFSRDDFLGEATINVTDLISLGMEHGTWEMSESKHRVVL 122

Query: 122 LNLYFKGEIEVGVSF 135
            +  + GEI V ++F
Sbjct: 123 ADKTYHGEIRVSLTF 137

[Close]

BLAST of CmoCh04G027750 vs. Swiss-Prot
Match: ERG1_ORYSI (Elicitor-responsive protein 1 OS=Oryza sativa subsp. indica GN=ERG1 PE=2 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 4.3e-23
Identity = 52/135 (38.52%), Postives = 81/135 (60.00%), Query Frame = 1


Query: 2   GMGMLEVHLISGKGLQAHDPLNK--PIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKF 61
           G G+LEVHL+  KGL  +D L +   IDPY  + Y+ QER S VA++ G +P W+E FKF
Sbjct: 3   GSGVLEVHLVDAKGLTGNDFLGEIGKIDPYVVVQYRSQERKSSVARDQGKNPSWNEVFKF 62

Query: 62  LAEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLL 121
                 + G   +F ++MDHD    DD +GE  I++ DL++ G+  G  ++    ++V+L
Sbjct: 63  QINSTAATGQHKLFLRLMDHDTFSRDDFLGEATINVTDLISLGMEHGTWEMSESKHRVVL 122

Query: 122 LNLYFKGEIEVGVSF 135
            +  + GEI V ++F
Sbjct: 123 ADKTYHGEIRVSLTF 137

[Close]

BLAST of CmoCh04G027750 vs. Swiss-Prot
Match: ERG3_ORYSJ (Elicitor-responsive protein 3 OS=Oryza sativa subsp. japonica GN=ERG3 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-15
Identity = 51/134 (38.06%), Postives = 73/134 (54.48%), Query Frame = 1


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           M  G LEV L+  KGL+  D L   +DPYA +  + QE+ S VA   G DP W+E F F 
Sbjct: 1   MVQGTLEVLLVGAKGLENTDYLCN-MDPYAVLKCRSQEQKSSVASGKGSDPEWNETFMFS 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
             +  +     +  K+MD D+  DDD +GE  I ++ +  EG       IPP +Y V+  
Sbjct: 61  VTHNAT----ELIIKLMDSDSGTDDDFVGEATISLEAIYTEG------SIPPTVYNVVKE 120

Query: 121 NLYFKGEIEVGVSF 135
             Y +GEI+VG++F
Sbjct: 121 EEY-RGEIKVGLTF 122

[Close]

BLAST of CmoCh04G027750 vs. TrEMBL
Match: Q4JHJ2_CUCMO (16 kDa. phloem protein 2 OS=Cucurbita moschata GN=PP16 PE=2 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 9.9e-75
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL
Sbjct: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
           AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL
Sbjct: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
           NLYFKGEIEVGVSFQRQ
Sbjct: 121 NLYFKGEIEVGVSFQRQ 137

[Close]

BLAST of CmoCh04G027750 vs. TrEMBL
Match: Q4JHI9_CUCMA (16 kDa. phloem protein 2 OS=Cucurbita maxima GN=PP16 PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 1.9e-65
Identity = 118/137 (86.13%), Postives = 129/137 (94.16%), Query Frame = 1


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           MGMGM+EVHLISGKGLQAHDPLNKPIDPYAEIN+KGQERMSKVAKNAGPDP+W+EKFKFL
Sbjct: 1   MGMGMMEVHLISGKGLQAHDPLNKPIDPYAEINFKGQERMSKVAKNAGPDPIWNEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
            EYPGSGGDFHI FKVMDHDAID DD IG+VKID+++LLAEGVRKGWS++PPRMYQVL  
Sbjct: 61  VEYPGSGGDFHILFKVMDHDAIDGDDYIGDVKIDVQNLLAEGVRKGWSELPPRMYQVLAH 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
            +YFKGEIEVGV FQRQ
Sbjct: 121 KIYFKGEIEVGVFFQRQ 137

[Close]

BLAST of CmoCh04G027750 vs. TrEMBL
Match: A0MZ37_CUCMO (16 kDa phloem protein 2 OS=Cucurbita moschata PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 1.9e-65
Identity = 118/137 (86.13%), Postives = 129/137 (94.16%), Query Frame = 1


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           MGMGM+EVHLISGKGLQAHDPLNKPIDPYAEIN+KGQERMSKVAKNAGPDP+W+EKFKFL
Sbjct: 1   MGMGMMEVHLISGKGLQAHDPLNKPIDPYAEINFKGQERMSKVAKNAGPDPIWNEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
            EYPGSGGDFHI FKVMDHDAID DD IG+VKID+++LLAEGVRKGWS++PPRMYQVL  
Sbjct: 61  VEYPGSGGDFHILFKVMDHDAIDGDDYIGDVKIDVQNLLAEGVRKGWSELPPRMYQVLAH 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
            +YFKGEIEVGV FQRQ
Sbjct: 121 KIYFKGEIEVGVFFQRQ 137

[Close]

BLAST of CmoCh04G027750 vs. TrEMBL
Match: Q4JHI5_9ROSI (16 kDa. phloem protein 2 OS=Cucurbita maxima x Cucurbita moschata GN=PP16 PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 1.9e-65
Identity = 118/137 (86.13%), Postives = 129/137 (94.16%), Query Frame = 1


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           MGMGM+EVHLISGKGLQAHDPLNKPIDPYAEIN+KGQERMSKVAKNAGPDP+W+EKFKFL
Sbjct: 1   MGMGMMEVHLISGKGLQAHDPLNKPIDPYAEINFKGQERMSKVAKNAGPDPIWNEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
            EYPGSGGDFHI FKVMDHDAID DD IG+VKID+++LLAEGVRKGWS++PPRMYQVL  
Sbjct: 61  VEYPGSGGDFHILFKVMDHDAIDGDDYIGDVKIDVQNLLAEGVRKGWSELPPRMYQVLAH 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
            +YFKGEIEVGV FQRQ
Sbjct: 121 KIYFKGEIEVGVFFQRQ 137

[Close]

BLAST of CmoCh04G027750 vs. TrEMBL
Match: Q4JHJ3_CUCMO (16 kDa. phloem protein 1 OS=Cucurbita moschata GN=PP16 PE=2 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.2e-64
Identity = 119/137 (86.86%), Postives = 126/137 (91.97%), Query Frame = 1


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           M MGMLEVHLISGKGLQAHDPLNKPIDPY EINYKGQERMSKVAKNAGPDPLWDEKFKFL
Sbjct: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
           AEYPGSGGDFH+ FKVMDHDAID DD IG+VKID+KDLLAEGVRKGWS+I PRMY VL  
Sbjct: 61  AEYPGSGGDFHVLFKVMDHDAIDGDDYIGDVKIDVKDLLAEGVRKGWSEIRPRMYHVLAH 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
            ++FKGEIEVGVSF+ Q
Sbjct: 121 KIHFKGEIEVGVSFKLQ 137

[Close]

BLAST of CmoCh04G027750 vs. TAIR10
Match: AT3G55470.1 (AT3G55470.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 138.3 bits (347), Expect = 3.7e-33
Identity = 69/135 (51.11%), Postives = 92/135 (68.15%), Query Frame = 1


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAK-NAGPDPLWDEKFKF 60
           M +G+LEV LISGKGL+  D L K IDPY EI YKGQ R S VAK + G +P W++K K+
Sbjct: 1   MAVGILEVSLISGKGLKRSDFLGK-IDPYVEIQYKGQTRKSSVAKEDGGRNPTWNDKLKW 60

Query: 61  LAEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLL 120
            AE+PGSG D+ +  KVMDHD    DD IGE  + +K+LL  GV KG +++ P  Y ++ 
Sbjct: 61  RAEFPGSGADYKLIVKVMDHDTFSSDDFIGEATVHVKELLEMGVEKGTAELRPTKYNIVD 120

Query: 121 LNLYFKGEIEVGVSF 135
            +L F GE+ +GVS+
Sbjct: 121 SDLSFVGELLIGVSY 134

[Close]

BLAST of CmoCh04G027750 vs. TAIR10
Match: AT1G63220.1 (AT1G63220.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 77.8 bits (190), Expect = 6.0e-15
Identity = 51/135 (37.78%), Postives = 71/135 (52.59%), Query Frame = 1


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           M  G LEV L+S KGL+  D LN  +DPY ++  + Q++ S VA+  G  P W+E F F 
Sbjct: 1   MPHGTLEVVLVSAKGLEDADFLNN-MDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFT 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
                S G   +  K+ D D   +DD +GE  I ++ +  EG       IPP  Y V+  
Sbjct: 61  V----SEGTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEG------SIPPTAYNVVKD 120

Query: 121 NLYFKGEIEVGVSFQ 136
             Y KGEI V +SF+
Sbjct: 121 EEY-KGEIWVALSFK 123

[Close]

BLAST of CmoCh04G027750 vs. TAIR10
Match: AT4G00467.1 (AT4G00467.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 68.2 bits (165), Expect = 4.8e-12
Identity = 42/136 (30.88%), Postives = 74/136 (54.41%), Query Frame = 1


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           M  G+LEV LI   G+   + +  P+  Y  +    +E  SK++K    + LW++KF F 
Sbjct: 1   MKRGILEVFLIDAHGITHTNFIGTPVY-YVLLQCGTKEYRSKMSKGDNDNALWNQKFVF- 60

Query: 61  AEYPGSGGD--FHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVL 120
            ++P S      +I  +++D +  +D   +GE  I +  ++ EG  +G+ +I P  Y V+
Sbjct: 61  -DFPMSQWKKLTYIKLRILDKELFNDGGFVGETIIHLGGIITEGRDRGYIEIKPAPYNVV 120

Query: 121 LLNLYFKGEIEVGVSF 135
           L +  FKGE++VG+ F
Sbjct: 121 LEDDTFKGELKVGLRF 133

[Close]

BLAST of CmoCh04G027750 vs. TAIR10
Match: AT4G05330.1 (AT4G05330.1 ARF-GAP domain 13)

HSP 1 Score: 51.6 bits (122), Expect = 4.6e-07
Identity = 32/123 (26.02%), Postives = 62/123 (50.41%), Query Frame = 1


Query: 3   MGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFLAE 62
           +G+L+V +  G  L   D ++   DPY  +N  G++++     N+  +P+W+++   +  
Sbjct: 179 IGLLKVTIKKGTNLAIRDMMSS--DPYVVLNL-GKQKLQTTVMNSNLNPVWNQEL--MLS 238

Query: 63  YPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLLNL 122
            P S G   +  +V D+D    DD++GE  IDI+ L+   +  G     P M+  + +  
Sbjct: 239 VPESYGPVKL--QVYDYDTFSADDIMGEADIDIQPLITSAMAFG----DPEMFGDMQIGK 290

Query: 123 YFK 126
           + K
Sbjct: 299 WLK 290

[Close]

BLAST of CmoCh04G027750 vs. TAIR10
Match: AT4G21160.1 (AT4G21160.1 Calcium-dependent ARF-type GTPase activating protein family)

HSP 1 Score: 48.1 bits (113), Expect = 5.1e-06
Identity = 32/123 (26.02%), Postives = 61/123 (49.59%), Query Frame = 1


Query: 3   MGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFLAE 62
           +G+L+V +  G  +   D ++   DPY  +    Q+  S V K+   +P+W+E+   +  
Sbjct: 180 IGLLKVTIKKGTNMAIRDMMSS--DPYVVLTLGQQKAQSTVVKS-NLNPVWNEEL--MLS 239

Query: 63  YPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLLNL 122
            P + G   +  +V D+D    DD++GE +IDI+ L+   +  G     P M+  + +  
Sbjct: 240 VPHNYGSVKL--QVFDYDTFSADDIMGEAEIDIQPLITSAMAFG----DPEMFGDMQIGK 291

Query: 123 YFK 126
           + K
Sbjct: 300 WLK 291

[Close]

BLAST of CmoCh04G027750 vs. NCBI nr
Match: gi|68349000|gb|AAY96407.1| (16 kDa. phloem protein 2 [Cucurbita moschata])

HSP 1 Score: 287.3 bits (734), Expect = 1.4e-74
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL
Sbjct: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
           AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL
Sbjct: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
           NLYFKGEIEVGVSFQRQ
Sbjct: 121 NLYFKGEIEVGVSFQRQ 137

[Close]

BLAST of CmoCh04G027750 vs. NCBI nr
Match: gi|25090875|sp|Q9ZT46.3|PP16B_CUCMA (RecName: Full=16 kDa phloem protein 2 [Cucurbita maxima])

HSP 1 Score: 256.5 bits (654), Expect = 2.7e-65
Identity = 118/137 (86.13%), Postives = 129/137 (94.16%), Query Frame = 1


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           MGMGM+EVHLISGKGLQAHDPLNKPIDPYAEIN+KGQERMSKVAKNAGPDP+W+EKFKFL
Sbjct: 1   MGMGMMEVHLISGKGLQAHDPLNKPIDPYAEINFKGQERMSKVAKNAGPDPIWNEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
            EYPGSGGDFHI FKVMDHDAID DD IG+VKID+++LLAEGVRKGWS++PPRMYQVL  
Sbjct: 61  VEYPGSGGDFHILFKVMDHDAIDGDDYIGDVKIDVQNLLAEGVRKGWSELPPRMYQVLAH 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
            +YFKGEIEVGV FQRQ
Sbjct: 121 KIYFKGEIEVGVFFQRQ 137

[Close]

BLAST of CmoCh04G027750 vs. NCBI nr
Match: gi|68348998|gb|AAY96406.1| (16 kDa. phloem protein 1 [Cucurbita moschata])

HSP 1 Score: 253.8 bits (647), Expect = 1.7e-64
Identity = 119/137 (86.86%), Postives = 126/137 (91.97%), Query Frame = 1


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           M MGMLEVHLISGKGLQAHDPLNKPIDPY EINYKGQERMSKVAKNAGPDPLWDEKFKFL
Sbjct: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
           AEYPGSGGDFH+ FKVMDHDAID DD IG+VKID+KDLLAEGVRKGWS+I PRMY VL  
Sbjct: 61  AEYPGSGGDFHVLFKVMDHDAIDGDDYIGDVKIDVKDLLAEGVRKGWSEIRPRMYHVLAH 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
            ++FKGEIEVGVSF+ Q
Sbjct: 121 KIHFKGEIEVGVSFKLQ 137

[Close]

BLAST of CmoCh04G027750 vs. NCBI nr
Match: gi|117573664|gb|ABK41004.1| (16 kDa phloem protein 1 [Cucurbita pepo])

HSP 1 Score: 252.7 bits (644), Expect = 3.9e-64
Identity = 118/137 (86.13%), Postives = 126/137 (91.97%), Query Frame = 1


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           MGMGMLEVHLISGKGLQAHDPLNKPIDPY +INYKGQERMS VAKN GP+PLWDEKFKFL
Sbjct: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYVDINYKGQERMSGVAKNGGPNPLWDEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
           AEYPGSGGDFHI FKVMDHDAID DD IG+VKID+KDLLAEGVRKGWS+IPPRMY VL  
Sbjct: 61  AEYPGSGGDFHILFKVMDHDAIDGDDYIGDVKIDVKDLLAEGVRKGWSEIPPRMYHVLAH 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
            ++FKGEIEVGVSF+ Q
Sbjct: 121 KIHFKGEIEVGVSFKLQ 137

[Close]

BLAST of CmoCh04G027750 vs. NCBI nr
Match: gi|68349012|gb|AAY96413.1| (16 kDa. phloem protein 1 [Cucurbita maxima x Cucurbita moschata])

HSP 1 Score: 252.7 bits (644), Expect = 3.9e-64
Identity = 119/137 (86.86%), Postives = 125/137 (91.24%), Query Frame = 1


Query: 1   MGMGMLEVHLISGKGLQAHDPLNKPIDPYAEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60
           M MGMLEVHLISGKGLQAHDPLNKPIDPY EINYKGQERMSKVAKNAGPDPLWDEKFKFL
Sbjct: 1   MAMGMLEVHLISGKGLQAHDPLNKPIDPYVEINYKGQERMSKVAKNAGPDPLWDEKFKFL 60

Query: 61  AEYPGSGGDFHIFFKVMDHDAIDDDDLIGEVKIDIKDLLAEGVRKGWSKIPPRMYQVLLL 120
           AEYPGSGGDFHI FKVMDHD ID DD IG+VKID+KDLLAEGVRKGWS+I PRMY VL  
Sbjct: 61  AEYPGSGGDFHILFKVMDHDVIDGDDYIGDVKIDVKDLLAEGVRKGWSEIRPRMYHVLAH 120

Query: 121 NLYFKGEIEVGVSFQRQ 138
            ++FKGEIEVGVSF+ Q
Sbjct: 121 KIHFKGEIEVGVSFKLQ 137

The following BLAST results are available for this feature:

BLAST of CmoCh04G027750 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP16B_CUCMA	1.7e-67	86.13	16 kDa phloem protein 2 OS=Cucurbita maxima GN=PP16-2 PE=1 SV=3	[more]
PP16A_CUCMA	3.5e-65	85.40	16 kDa phloem protein 1 OS=Cucurbita maxima GN=PP16-1 PE=1 SV=3	[more]
ERG1_ORYSJ	4.3e-23	38.52	Elicitor-responsive protein 1 OS=Oryza sativa subsp. japonica GN=ERG1 PE=2 SV=1	[more]
ERG1_ORYSI	4.3e-23	38.52	Elicitor-responsive protein 1 OS=Oryza sativa subsp. indica GN=ERG1 PE=2 SV=2	[more]
ERG3_ORYSJ	1.1e-15	38.06	Elicitor-responsive protein 3 OS=Oryza sativa subsp. japonica GN=ERG3 PE=2 SV=1	[more]

BLAST of CmoCh04G027750 vs. TrEMBL


Match Name	E-value	Identity	Description
Q4JHJ2_CUCMO	9.9e-75	100.00	16 kDa. phloem protein 2 OS=Cucurbita moschata GN=PP16 PE=2 SV=1	[more]
Q4JHI9_CUCMA	1.9e-65	86.13	16 kDa. phloem protein 2 OS=Cucurbita maxima GN=PP16 PE=2 SV=1	[more]
A0MZ37_CUCMO	1.9e-65	86.13	16 kDa phloem protein 2 OS=Cucurbita moschata PE=2 SV=1	[more]
Q4JHI5_9ROSI	1.9e-65	86.13	16 kDa. phloem protein 2 OS=Cucurbita maxima x Cucurbita moschata GN=PP16 PE=2 S...	[more]
Q4JHJ3_CUCMO	1.2e-64	86.86	16 kDa. phloem protein 1 OS=Cucurbita moschata GN=PP16 PE=2 SV=1	[more]

BLAST of CmoCh04G027750 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G55470.1	3.7e-33	51.11	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT1G63220.1	6.0e-15	37.78	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT4G00467.1	4.8e-12	30.88	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT4G05330.1	4.6e-07	26.02	ARF-GAP domain 13	[more]
AT4G21160.1	5.1e-06	26.02	Calcium-dependent ARF-type GTPase activating protein family	[more]

BLAST of CmoCh04G027750 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|68349000\|gb\|AAY96407.1\|	1.4e-74	100.00	16 kDa. phloem protein 2 [Cucurbita moschata]	[more]
gi\|25090875\|sp\|Q9ZT46.3\|PP16B_CUCMA	2.7e-65	86.13	RecName: Full=16 kDa phloem protein 2 [Cucurbita maxima]	[more]
gi\|68348998\|gb\|AAY96406.1\|	1.7e-64	86.86	16 kDa. phloem protein 1 [Cucurbita moschata]	[more]
gi\|117573664\|gb\|ABK41004.1\|	3.9e-64	86.13	16 kDa phloem protein 1 [Cucurbita pepo]	[more]
gi\|68349012\|gb\|AAY96413.1\|	3.9e-64	86.86	16 kDa. phloem protein 1 [Cucurbita maxima x Cucurbita moschata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000008	C2_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006887	exocytosis
cellular_component	GO:0005623	cell
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G027750.1	CmoCh04G027750.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000008	C2 domain	GENE3D	G3DSA:2.60.40.150		coord: 3..136 score: 9.5
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 4..109 score: 7.6
IPR000008	C2 domain	SMART	SM00239	C2_3c	coord: 5..107 score: 7.2
IPR000008	C2 domain	PROFILE	PS50004	C2	coord: 1..92 score: 14
IPR000008	C2 domain	unknown	SSF49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 2..125 score: 1.2
None	No IPR available	PANTHER	PTHR10774	EXTENDED SYNAPTOTAGMIN-RELATED	coord: 3..140 score: 2.7
None	No IPR available	PANTHER	PTHR10774:SF58	SUBFAMILY NOT NAMED	coord: 3..140 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G027750	Melon (DHL92) v3.6.1	cmomedB713
CmoCh04G027750	Melon (DHL92) v3.6.1	cmomedB730
CmoCh04G027750	Melon (DHL92) v3.6.1	cmomedB796
CmoCh04G027750	Silver-seed gourd	carcmoB0370
CmoCh04G027750	Silver-seed gourd	carcmoB0940
CmoCh04G027750	Cucumber (Chinese Long) v3	cmocucB0869
CmoCh04G027750	Cucumber (Chinese Long) v3	cmocucB0832
CmoCh04G027750	Cucumber (Chinese Long) v3	cmocucB0848
CmoCh04G027750	Watermelon (97103) v2	cmowmbB728
CmoCh04G027750	Watermelon (97103) v2	cmowmbB772
CmoCh04G027750	Wax gourd	cmowgoB0836
CmoCh04G027750	Wax gourd	cmowgoB0874
CmoCh04G027750	Cucurbita moschata (Rifu)	cmocmoB261
CmoCh04G027750	Cucurbita moschata (Rifu)	cmocmoB476
CmoCh04G027750	Cucumber (Gy14) v1	cgycmoB0544
CmoCh04G027750	Cucurbita maxima (Rimu)	cmacmoB308
CmoCh04G027750	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G027750	Wild cucumber (PI 183967)	cmocpiB724
CmoCh04G027750	Cucumber (Chinese Long) v2	cmocuB716
CmoCh04G027750	Melon (DHL92) v3.5.1	cmomeB624
CmoCh04G027750	Watermelon (Charleston Gray)	cmowcgB608
CmoCh04G027750	Watermelon (97103) v1	cmowmB646
CmoCh04G027750	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G027750	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G027750	Bottle gourd (USVL1VR-Ls)	cmolsiB640
CmoCh04G027750	Bottle gourd (USVL1VR-Ls)	cmolsiB667
CmoCh04G027750	Cucumber (Gy14) v2	cgybcmoB520
CmoCh04G027750	Cucumber (Gy14) v2	cgybcmoB626
CmoCh04G027750	Cucumber (Gy14) v2	cgybcmoB648