CmoCh04G025590 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G025590
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Transcription factor
Location	Cmo_Chr04 : 18754570 .. 18755305 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCAGAGAGATACCACTGAATTGACTACTGAAAACAGAGAGCTTAAACTAAGGCTGCAGGCCATGGAGCAACAGGCCCAACTCAGAGATGGTATGTGTGGTTCTTCTTCATCATTCATCTTCTTACTTACTATGGCTCATATAAAAATGGTAACTTGAGGTGGTGGATTACAGCACTGAACGAGACATTGAAGGAGGAAGTGCAACGGCTGAAGATAGCTGCAGCTCAATTGCCTGTTGCAAATGGCAGCTCGTTCAACATTGGAGGAGGGGCGCTACCCCCTCAATTCCATACTCTCCAGCCATCCTTGCATCAGTTTGGCAACTCTCAGAATCATCAACAGTAATAGCTACTGCTGCTATGATGCTCCACCATCGCAGCTTCTCGGAGCATAACCAGCCACTCCCGGTCAGTTATCGATTCTCCTGGAATGGCTTTTCCTCTTTTCCTGAGTAACATCTTCAGCTAATCCATTACTTGATATTAGTAATATTTTATTTCGAAAGCTAAGGAATTGTAGCAGCATGTGTCTTCTACATTTGAATTTGTATTGAGTATATTTGTAAAAACAAACAAATACATGTGTATAGAAGCTGTATTATCTCTTTGATGATTGAGGATTGTATTGTACTACCACTCAGCAAATAATAGGGCCTCTCTTCTTTATGAGCGACCAAATCATATTTCTTGTTATGAACGAGCTGTTCTCCTCATCTAATATCAAGTTCCCTG

mRNA sequence

ATGGTGCAGAGAGATACCACTGAATTGACTACTGAAAACAGAGAGCTTAAACTAAGGCTGCAGGCCATGGAGCAACAGGCCCAACTCAGAGATGCACTGAACGAGACATTGAAGGAGGAAGTGCAACGGCTGAAGATAGCTGCAGCTCAATTGCCTGTTGCAAATGGCAGCTCGTTCAACATTGGAGGAGGGGCGCTACCCCCTCAATTCCATACTCTCCAGCCATCCTTGCATCAGTTTGGCAACTCTCAGAATCATCAACAGTAATAGCTACTGCTGCTATGATGCTCCACCATCGCAGCTTCTCGGAGCATAACCAGCCACTCCCGGTCAGTTATCGATTCTCCTGGAATGGCTTTTCCTCTTTTCCTGAGTAACATCTTCAGCTAATCCATTACTTGATATTAGTAATATTTTATTTCGAAAGCTAAGGAATTGTAGCAGCATGTGTCTTCTACATTTGAATTTGTATTGAGTATATTTGTAAAAACAAACAAATACATGTGTATAGAAGCTGTATTATCTCTTTGATGATTGAGGATTGTATTGTACTACCACTCAGCAAATAATAGGGCCTCTCTTCTTTATGAGCGACCAAATCATATTTCTTGTTATGAACGAGCTGTTCTCCTCATCTAATATCAAGTTCCCTG

Coding sequence (CDS)

ATGGTGCAGAGAGATACCACTGAATTGACTACTGAAAACAGAGAGCTTAAACTAAGGCTGCAGGCCATGGAGCAACAGGCCCAACTCAGAGATGCACTGAACGAGACATTGAAGGAGGAAGTGCAACGGCTGAAGATAGCTGCAGCTCAATTGCCTGTTGCAAATGGCAGCTCGTTCAACATTGGAGGAGGGGCGCTACCCCCTCAATTCCATACTCTCCAGCCATCCTTGCATCAGTTTGGCAACTCTCAGAATCATCAACAGTAA

Homology

[Close]

BLAST of CmoCh04G025590 vs. Swiss-Prot
Match: VIP1_ARATH (Transcription factor VIP1 OS=Arabidopsis thaliana GN=VIP1 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 6.4e-17
Identity = 46/87 (52.87%), Postives = 64/87 (73.56%), Query Frame = 1


Query: 1   MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFN 60
           M+QR T+EL TEN+ LK+RLQA+EQQA+LRDALNE L++E+ RLK+ A ++P  NG+S+N
Sbjct: 242 MLQRGTSELNTENKHLKMRLQALEQQAELRDALNEALRDELNRLKVVAGEIPQGNGNSYN 301

Query: 61  IGGGALPPQFHTLQPSLHQFGNSQNHQ 88
                   QF + Q +++QFGN  N Q
Sbjct: 302 ------RAQFSSQQSAMNQFGNKTNQQ 322

[Close]

BLAST of CmoCh04G025590 vs. Swiss-Prot
Match: RF2A_ORYSJ (Transcription factor RF2a OS=Oryza sativa subsp. japonica GN=RF2a PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 8.6e-14
Identity = 46/84 (54.76%), Postives = 56/84 (66.67%), Query Frame = 1


Query: 1   MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFN 60
           ++QRDT+ LTTEN ELKLRLQ MEQQ  L+DALN+TLK EVQRLK+A  Q+  ANG    
Sbjct: 229 LLQRDTSGLTTENSELKLRLQTMEQQVHLQDALNDTLKSEVQRLKVATGQM--ANGGGMM 288

Query: 61  IGGGALPPQFHTLQPSLHQFGNSQ 85
           +  G +P          HQFG +Q
Sbjct: 289 MNFGGMP----------HQFGGNQ 300

[Close]

BLAST of CmoCh04G025590 vs. Swiss-Prot
Match: RF2B_ORYSJ (Transcription factor RF2b OS=Oryza sativa subsp. japonica GN=RF2b PE=1 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 6.2e-12
Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 1


Query: 1   MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVAN----- 60
           + QRDTT L+ EN ELK+RLQAMEQQAQLRDALN+ LK+E++RLK+A  ++  +N     
Sbjct: 180 LFQRDTTGLSAENAELKIRLQAMEQQAQLRDALNDALKQELERLKLATGEMTNSNETYSM 239

Query: 61  -----------------GSSFNIGGGALPPQFHTLQPSL 78
                             ++   GG  LPPQF   +P++
Sbjct: 240 GLQHVPYNTPFFPLAQHNAARQNGGTQLPPQFQPPRPNV 278

[Close]

BLAST of CmoCh04G025590 vs. Swiss-Prot
Match: POF21_ARATH (Probable transcription factor PosF21 OS=Arabidopsis thaliana GN=POSF21 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.3e-09
Identity = 44/95 (46.32%), Postives = 55/95 (57.89%), Query Frame = 1


Query: 1   MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFN 60
           ++QRDT  LT EN ELKLRLQ MEQQ  L+D LNE LKEE+Q LK+   Q+     S+ N
Sbjct: 249 LLQRDTNGLTVENNELKLRLQTMEQQVHLQDELNEALKEEIQHLKVLTGQVA---PSALN 308

Query: 61  IGG-GALPPQFHTLQPSLH------QFGNSQNHQQ 89
            G  G+   QF++   S+       QF   Q H Q
Sbjct: 309 YGSFGSNQQQFYSNNQSMQTILAAKQFQQLQIHSQ 340

[Close]

BLAST of CmoCh04G025590 vs. TrEMBL
Match: A0A0A0KBC6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G057150 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.3e-29
Identity = 75/88 (85.23%), Postives = 80/88 (90.91%), Query Frame = 1


Query: 1   MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFN 60
           ++QRDTT LTTENRELKLRLQAMEQQA LRDALNETL+EEVQRLKIAAAQLPVANG+SFN
Sbjct: 254 VLQRDTTGLTTENRELKLRLQAMEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFN 313

Query: 61  IGGGALPPQFHTLQPSLHQFGNSQNHQQ 89
           +GGG LPPQF  LQ S  QFGNSQNHQQ
Sbjct: 314 MGGG-LPPQFPPLQTSFLQFGNSQNHQQ 340

[Close]

BLAST of CmoCh04G025590 vs. TrEMBL
Match: W9S077_9ROSA (Transcription factor VIP1 OS=Morus notabilis GN=L484_017885 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-21
Identity = 60/88 (68.18%), Postives = 71/88 (80.68%), Query Frame = 1


Query: 1   MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFN 60
           ++QRDTT LT+EN+ELKLRLQAMEQQA+LR+ALNE LKEEVQRLKIA  Q+P  NG+ FN
Sbjct: 229 LLQRDTTGLTSENKELKLRLQAMEQQAELREALNEKLKEEVQRLKIATGQMPHVNGNPFN 288

Query: 61  IGGGALPPQFHTLQPSLHQFGNSQNHQQ 89
            G   LPPQF + QP LH FG+ Q+ QQ
Sbjct: 289 RG---LPPQFASQQPVLHHFGSHQSQQQ 313

[Close]

BLAST of CmoCh04G025590 vs. TrEMBL
Match: A0A059BT81_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02715 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 8.7e-21
Identity = 63/89 (70.79%), Postives = 69/89 (77.53%), Query Frame = 1


Query: 1   MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFN 60
           ++QRDTT LT EN+ELKLRLQAMEQQAQLRDALNE LKEEVQRLKIAA Q+P  NG+ F 
Sbjct: 250 LLQRDTTGLTAENKELKLRLQAMEQQAQLRDALNEALKEEVQRLKIAAGQMPAVNGAPF- 309

Query: 61  IGGGALPPQFHTLQPSLHQFGNSQN-HQQ 89
             GG + PQF   QP LHQFG   N HQQ
Sbjct: 310 --GGPI-PQFSARQPPLHQFGGGPNRHQQ 334

[Close]

BLAST of CmoCh04G025590 vs. TrEMBL
Match: A0A059BU74_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02715 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 8.7e-21
Identity = 63/89 (70.79%), Postives = 69/89 (77.53%), Query Frame = 1


Query: 1   MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFN 60
           ++QRDTT LT EN+ELKLRLQAMEQQAQLRDALNE LKEEVQRLKIAA Q+P  NG+ F 
Sbjct: 250 LLQRDTTGLTAENKELKLRLQAMEQQAQLRDALNEALKEEVQRLKIAAGQMPAVNGAPF- 309

Query: 61  IGGGALPPQFHTLQPSLHQFGNSQN-HQQ 89
             GG + PQF   QP LHQFG   N HQQ
Sbjct: 310 --GGPI-PQFSARQPPLHQFGGGPNRHQQ 334

[Close]

BLAST of CmoCh04G025590 vs. TrEMBL
Match: A0A067H821_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019163mg PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-20
Identity = 59/88 (67.05%), Postives = 67/88 (76.14%), Query Frame = 1


Query: 1   MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFN 60
           M+QRDTT LT EN+ELKLRLQAMEQQA LRDALNE L+EEVQRLKIA  Q+P ANG+ F 
Sbjct: 229 MLQRDTTGLTAENKELKLRLQAMEQQAHLRDALNEALREEVQRLKIATGQIPAANGNPF- 288

Query: 61  IGGGALPPQFHTLQPSLHQFGNSQNHQQ 89
             G  LPPQF + Q ++H FG  Q  QQ
Sbjct: 289 --GRGLPPQFPSHQQAMHNFGGPQTQQQ 313

[Close]

BLAST of CmoCh04G025590 vs. TAIR10
Match: AT1G43700.1 (AT1G43700.1 VIRE2-interacting protein 1)

HSP 1 Score: 87.8 bits (216), Expect = 3.6e-18
Identity = 46/87 (52.87%), Postives = 64/87 (73.56%), Query Frame = 1


Query: 1   MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFN 60
           M+QR T+EL TEN+ LK+RLQA+EQQA+LRDALNE L++E+ RLK+ A ++P  NG+S+N
Sbjct: 242 MLQRGTSELNTENKHLKMRLQALEQQAELRDALNEALRDELNRLKVVAGEIPQGNGNSYN 301

Query: 61  IGGGALPPQFHTLQPSLHQFGNSQNHQ 88
                   QF + Q +++QFGN  N Q
Sbjct: 302 ------RAQFSSQQSAMNQFGNKTNQQ 322

[Close]

BLAST of CmoCh04G025590 vs. TAIR10
Match: AT1G06070.1 (AT1G06070.1 Basic-leucine zipper (bZIP) transcription factor family protein)

HSP 1 Score: 72.0 bits (175), Expect = 2.0e-13
Identity = 44/88 (50.00%), Postives = 55/88 (62.50%), Query Frame = 1


Query: 1   MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFN 60
           ++QRDT  L  EN ELKLR+Q MEQQ  L+DALN+ LKEEVQ LK+   Q P +NG+S N
Sbjct: 258 LLQRDTNGLGVENNELKLRVQTMEQQVHLQDALNDALKEEVQHLKVLTGQGP-SNGTSMN 317

Query: 61  IGGGALPPQFHTLQPSLHQFGNSQNHQQ 89
            G      QF+    S+H    +Q  QQ
Sbjct: 318 YGSFGSNQQFYPNNQSMHTILAAQQLQQ 344

[Close]

BLAST of CmoCh04G025590 vs. TAIR10
Match: AT2G40620.1 (AT2G40620.1 Basic-leucine zipper (bZIP) transcription factor family protein)

HSP 1 Score: 68.6 bits (166), Expect = 2.3e-12
Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 1


Query: 1   MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFN 60
           + QRDTT L++EN ELKLRLQ MEQQA+LRDALNE LK+EV+RLK A  +  V+   ++N
Sbjct: 196 LFQRDTTGLSSENTELKLRLQVMEQQAKLRDALNEQLKKEVERLKFATGE--VSPADAYN 255

Query: 61  IGGGAL----PPQFHTLQPSLHQFGNSQNHQQ 89
           +G   +     PQ    Q    Q  ++QN QQ
Sbjct: 256 LGMAHMQYQQQPQQSFFQHHHQQQTDAQNLQQ 285

[Close]

BLAST of CmoCh04G025590 vs. TAIR10
Match: AT1G06850.1 (AT1G06850.1 basic leucine-zipper 52)

HSP 1 Score: 65.9 bits (159), Expect = 1.5e-11
Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 1


Query: 1   MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFN 60
           + QRDT  L  EN ELKLRLQAMEQQAQLR+ALNE L++EV+R+K+   ++   N  SF+
Sbjct: 196 LYQRDTNGLANENTELKLRLQAMEQQAQLRNALNEALRKEVERMKMETGEIS-GNSDSFD 255

Query: 61  IG 63
           +G
Sbjct: 256 MG 256

[Close]

BLAST of CmoCh04G025590 vs. TAIR10
Match: AT2G31370.3 (AT2G31370.3 Basic-leucine zipper (bZIP) transcription factor family protein)

HSP 1 Score: 63.5 bits (153), Expect = 7.3e-11
Identity = 44/95 (46.32%), Postives = 55/95 (57.89%), Query Frame = 1


Query: 1   MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFN 60
           ++QRDT  LT EN ELKLRLQ MEQQ  L+D LNE LKEE+Q LK+   Q+     S+ N
Sbjct: 249 LLQRDTNGLTVENNELKLRLQTMEQQVHLQDELNEALKEEIQHLKVLTGQVA---PSALN 308

Query: 61  IGG-GALPPQFHTLQPSLH------QFGNSQNHQQ 89
            G  G+   QF++   S+       QF   Q H Q
Sbjct: 309 YGSFGSNQQQFYSNNQSMQTILAAKQFQQLQIHSQ 340

[Close]

BLAST of CmoCh04G025590 vs. NCBI nr
Match: gi|659081806|ref|XP_008441523.1| (PREDICTED: transcription factor VIP1-like [Cucumis melo])

HSP 1 Score: 140.6 bits (353), Expect = 1.3e-30
Identity = 75/87 (86.21%), Postives = 80/87 (91.95%), Query Frame = 1


Query: 1   MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFN 60
           ++QRDTT LTTENRELKLRLQAMEQQA LRDALNETL+EEVQRLKIAAAQLPVANG+SFN
Sbjct: 260 VLQRDTTGLTTENRELKLRLQAMEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFN 319

Query: 61  IGGGALPPQFHTLQPSLHQFGNSQNHQ 88
           +GGG LPPQF  LQ SL QFGNSQNHQ
Sbjct: 320 MGGGGLPPQFPPLQTSLLQFGNSQNHQ 346

[Close]

BLAST of CmoCh04G025590 vs. NCBI nr
Match: gi|449446510|ref|XP_004141014.1| (PREDICTED: transcription factor VIP1 [Cucumis sativus])

HSP 1 Score: 136.0 bits (341), Expect = 3.3e-29
Identity = 75/88 (85.23%), Postives = 80/88 (90.91%), Query Frame = 1


Query: 1   MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFN 60
           ++QRDTT LTTENRELKLRLQAMEQQA LRDALNETL+EEVQRLKIAAAQLPVANG+SFN
Sbjct: 254 VLQRDTTGLTTENRELKLRLQAMEQQAHLRDALNETLREEVQRLKIAAAQLPVANGNSFN 313

Query: 61  IGGGALPPQFHTLQPSLHQFGNSQNHQQ 89
           +GGG LPPQF  LQ S  QFGNSQNHQQ
Sbjct: 314 MGGG-LPPQFPPLQTSFLQFGNSQNHQQ 340

[Close]

BLAST of CmoCh04G025590 vs. NCBI nr
Match: gi|703145898|ref|XP_010108652.1| (Transcription factor VIP1 [Morus notabilis])

HSP 1 Score: 109.4 bits (272), Expect = 3.3e-21
Identity = 60/88 (68.18%), Postives = 71/88 (80.68%), Query Frame = 1


Query: 1   MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFN 60
           ++QRDTT LT+EN+ELKLRLQAMEQQA+LR+ALNE LKEEVQRLKIA  Q+P  NG+ FN
Sbjct: 229 LLQRDTTGLTSENKELKLRLQAMEQQAELREALNEKLKEEVQRLKIATGQMPHVNGNPFN 288

Query: 61  IGGGALPPQFHTLQPSLHQFGNSQNHQQ 89
            G   LPPQF + QP LH FG+ Q+ QQ
Sbjct: 289 RG---LPPQFASQQPVLHHFGSHQSQQQ 313

[Close]

BLAST of CmoCh04G025590 vs. NCBI nr
Match: gi|702373716|ref|XP_010062128.1| (PREDICTED: transcription factor VIP1 [Eucalyptus grandis])

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-20
Identity = 63/89 (70.79%), Postives = 69/89 (77.53%), Query Frame = 1


Query: 1   MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFN 60
           ++QRDTT LT EN+ELKLRLQAMEQQAQLRDALNE LKEEVQRLKIAA Q+P  NG+ F 
Sbjct: 250 LLQRDTTGLTAENKELKLRLQAMEQQAQLRDALNEALKEEVQRLKIAAGQMPAVNGAPF- 309

Query: 61  IGGGALPPQFHTLQPSLHQFGNSQN-HQQ 89
             GG + PQF   QP LHQFG   N HQQ
Sbjct: 310 --GGPI-PQFSARQPPLHQFGGGPNRHQQ 334

[Close]

BLAST of CmoCh04G025590 vs. NCBI nr
Match: gi|629103726|gb|KCW69195.1| (hypothetical protein EUGRSUZ_F02715 [Eucalyptus grandis])

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-20
Identity = 63/89 (70.79%), Postives = 69/89 (77.53%), Query Frame = 1


Query: 1   MVQRDTTELTTENRELKLRLQAMEQQAQLRDALNETLKEEVQRLKIAAAQLPVANGSSFN 60
           ++QRDTT LT EN+ELKLRLQAMEQQAQLRDALNE LKEEVQRLKIAA Q+P  NG+ F 
Sbjct: 250 LLQRDTTGLTAENKELKLRLQAMEQQAQLRDALNEALKEEVQRLKIAAGQMPAVNGAPF- 309

Query: 61  IGGGALPPQFHTLQPSLHQFGNSQN-HQQ 89
             GG + PQF   QP LHQFG   N HQQ
Sbjct: 310 --GGPI-PQFSARQPPLHQFGGGPNRHQQ 334

The following BLAST results are available for this feature:

BLAST of CmoCh04G025590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
VIP1_ARATH	6.4e-17	52.87	Transcription factor VIP1 OS=Arabidopsis thaliana GN=VIP1 PE=1 SV=1	[more]
RF2A_ORYSJ	8.6e-14	54.76	Transcription factor RF2a OS=Oryza sativa subsp. japonica GN=RF2a PE=1 SV=1	[more]
RF2B_ORYSJ	6.2e-12	43.43	Transcription factor RF2b OS=Oryza sativa subsp. japonica GN=RF2b PE=1 SV=2	[more]
POF21_ARATH	1.3e-09	46.32	Probable transcription factor PosF21 OS=Arabidopsis thaliana GN=POSF21 PE=2 SV=1	[more]

BLAST of CmoCh04G025590 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBC6_CUCSA	2.3e-29	85.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G057150 PE=4 SV=1	[more]
W9S077_9ROSA	2.3e-21	68.18	Transcription factor VIP1 OS=Morus notabilis GN=L484_017885 PE=4 SV=1	[more]
A0A059BT81_EUCGR	8.7e-21	70.79	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02715 PE=4 SV=1	[more]
A0A059BU74_EUCGR	8.7e-21	70.79	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02715 PE=4 SV=1	[more]
A0A067H821_CITSI	1.5e-20	67.05	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g019163mg PE=4 SV=1	[more]

BLAST of CmoCh04G025590 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G43700.1	3.6e-18	52.87	VIRE2-interacting protein 1	[more]
AT1G06070.1	2.0e-13	50.00	Basic-leucine zipper (bZIP) transcription factor family protein	[more]
AT2G40620.1	2.3e-12	50.00	Basic-leucine zipper (bZIP) transcription factor family protein	[more]
AT1G06850.1	1.5e-11	58.06	basic leucine-zipper 52	[more]
AT2G31370.3	7.3e-11	46.32	Basic-leucine zipper (bZIP) transcription factor family protein	[more]

BLAST of CmoCh04G025590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659081806\|ref\|XP_008441523.1\|	1.3e-30	86.21	PREDICTED: transcription factor VIP1-like [Cucumis melo]	[more]
gi\|449446510\|ref\|XP_004141014.1\|	3.3e-29	85.23	PREDICTED: transcription factor VIP1 [Cucumis sativus]	[more]
gi\|703145898\|ref\|XP_010108652.1\|	3.3e-21	68.18	Transcription factor VIP1 [Morus notabilis]	[more]
gi\|702373716\|ref\|XP_010062128.1\|	1.2e-20	70.79	PREDICTED: transcription factor VIP1 [Eucalyptus grandis]	[more]
gi\|629103726\|gb\|KCW69195.1\|	1.2e-20	70.79	hypothetical protein EUGRSUZ_F02715 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007154	cell communication
biological_process	GO:0009294	DNA mediated transformation
biological_process	GO:0009652	thigmotropism
biological_process	GO:0008272	sulfate transport
biological_process	GO:0007231	osmosensory signaling pathway
biological_process	GO:0051170	nuclear import
biological_process	GO:0033554	cellular response to stress
biological_process	GO:0045596	negative regulation of cell differentiation
biological_process	GO:0009970	cellular response to sulfate starvation
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0006810	transport
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0051019	mitogen-activated protein kinase binding
molecular_function	GO:0043621	protein self-association

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G025590.1	CmoCh04G025590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 6..50 scor
None	No IPR available	PANTHER	PTHR13690	FAMILY NOT NAMED	coord: 1..88 score: 4.3
None	No IPR available	PANTHER	PTHR13690:SF86	TRANSCRIPTION FACTOR VIP1	coord: 1..88 score: 4.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G025590	Lsi08G005500	Bottle gourd (USVL1VR-Ls)	cmolsiB697
CmoCh04G025590	MELO3C008356.2	Melon (DHL92) v3.6.1	cmomedB762
CmoCh04G025590	CsaV3_6G005320	Cucumber (Chinese Long) v3	cmocucB0898
CmoCh04G025590	Cla97C08G149620	Watermelon (97103) v2	cmowmbB760
CmoCh04G025590	Bhi04G001371	Wax gourd	cmowgoB0865
CmoCh04G025590	CsGy6G004900	Cucumber (Gy14) v2	cgybcmoB815
CmoCh04G025590	Carg15787	Silver-seed gourd	carcmoB0094

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G025590	CmoCh01G010380	Cucurbita moschata (Rifu)	cmocmoB367

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G025590	Silver-seed gourd	carcmoB1121
CmoCh04G025590	Cucumber (Chinese Long) v3	cmocucB0902
CmoCh04G025590	Cucumber (Chinese Long) v3	cmocucB0911
CmoCh04G025590	Watermelon (97103) v2	cmowmbB770
CmoCh04G025590	Cucurbita moschata (Rifu)	cmocmoB029
CmoCh04G025590	Cucurbita moschata (Rifu)	cmocmoB262
CmoCh04G025590	Cucumber (Gy14) v1	cgycmoB0137
CmoCh04G025590	Cucumber (Gy14) v1	cgycmoB1004
CmoCh04G025590	Cucurbita maxima (Rimu)	cmacmoB309
CmoCh04G025590	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G025590	Wild cucumber (PI 183967)	cmocpiB769
CmoCh04G025590	Cucumber (Chinese Long) v2	cmocuB760
CmoCh04G025590	Cucumber (Chinese Long) v2	cmocuB771
CmoCh04G025590	Melon (DHL92) v3.5.1	cmomeB672
CmoCh04G025590	Watermelon (Charleston Gray)	cmowcgB605
CmoCh04G025590	Watermelon (Charleston Gray)	cmowcgB680
CmoCh04G025590	Watermelon (97103) v1	cmowmB661
CmoCh04G025590	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G025590	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G025590	Cucurbita pepo (Zucchini)	cmocpeB708
CmoCh04G025590	Bottle gourd (USVL1VR-Ls)	cmolsiB643
CmoCh04G025590	Cucumber (Gy14) v2	cgybcmoB950