CmoCh04G024900 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G024900
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Proteasome subunit beta type (3.4.25.1)
Location	Cmo_Chr04 : 18339594 .. 18343563 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGGAGAAGGGGTTGGAGTGAGGCCCAAGCCATTAATGGAGCTATACTAAAATCCACTCAGACTCTGGTTCCCGCATTTCTCTTTGCGATTCAACTCTCTCCTCTCTCAGGTTTGGATTTCTTCCTTCAATCTTCACAACTTCAATTCATATCTCTACATGTGTTAGTTTAGATTAGGGTTTTTGGAACAGGTTTGCGTTTCATTGATTTGATTTCGGCACAAACATGTCCGATTGCTCTGGGCTGACAATTCTCTCCTTTTTTATTTTTTTTGTTCTTATGTTGCAAAGATTTTCATACTTTGTTCCGGGGAAGCTTGAGTAGCGGACCTGATGTCGGTGCGTTTCTCTTCATTAGCATTATTGCCATTCTTTTGGAAGTTTTAGGTTGTATGTAGTTCAGACATTGTGGTATTAAATTGTTTTTGTAGATCTTTGAGTATAATGGAAGTGCCGTAGTTGCGATGGTGGGGAAGAATTGTTTTGCCATTGCTAGCGATCGTAGGTTTGGAGTTCAGCTTCAGACAATTGCCACGGATTTCCAGAAAATTTACCGGATTCATGATAAGCTATTTCTTGGCCTTTCGGGCCTCGGTACCGATGCTCAGACACTGTATGTTCCTGTGGTTGATTCTTTTCCGGTTGGTTTTCATTGCTTAACTCCTGCGTTTGAAATGAAGGTATCAACGACTTGTCTATCAGCACAAACTATACCAGCTTCGAGAAGAGAGGGACATGAAACCTGAGACATTTGCTAGCCTTGTCTCAGCTCGTCTTTATGAGAAAAGGTTGGACATCGATTGAACTTCTAGTTATCTCTTTTTCAGCTGTTTTCACGCATACTCTCTATTTTTCGCCGTAGACTGAAGAACATGGTTGGGAATGAGATTTCTATAGGATTTGTCCGAGCTTCATTTGTGTGTATATGTTGATTCTTCTACCAGTGTGATCCTCATGTTGATGTAATATTGTAAGCTGACTTGATAGAGATGTTGCCTTGCACTAAGTGTCACTCCAGAGTTTATGATGTCAACCTTCAATGCATAGTACAGATATGTCAAAGCGTGTTTATAGAATTGGTGTATGTTAAATTGACTGGCAAGATCTTTTATACGAATTTAGAAATAGGATTACAAGTTGGCTTGTTGGATATAGTTGAAAATGTGAATAAACTTGTGAACAATATTGAAAAGCGCACACAAAAAGGATGAATTCACTATTATTGTTTTGCCTTTTTAGGTCAGATTAAAAACTCATATATCAATTTTCTCATTCGTAGATTTGGTCCATACTTCTGCCAGCCTGTAATTGCTGGATTGAGTGATGAAGACAAACCCTTCATTTGCACAATGGATTGCATTGGGGCCAAGTGAGTACTCTCCTTTTTTTTTCTCTGTCTAGGTCACAACTTTTTTATTTTCTTTGGTTGGACTTTTAGCTTACATTAGTTATATGGGTATCTTCTTGTTGTTTGATTACAAAAATGTGCATCAGACTTGATGTTGCAGTCTCTGCAACGCATTGTAATGAAATATTATTTTTGGGATTAGCTTTTCTAGGTTTAGGATTATCTAATGTAAAACTAATACATCGAATTCACTGTTCCCAGAGAGCTTGCTAAGGATTTTGTTGTTTCTGGCACTGCATCAGAGTCCCTTTATGGTGCGTGTGAGGCAATGTTTAAACCTGACCTGGTATGTTGGTATAATCCATTTACATATGCTCTGTATCCATCATTGGGATTCTGATTTGCTTTGAACTGAGGAAGAAATATATGTAAGTTGCTTGTTTGCTTTGCGATTTAGCAATGTAGCCTTTCCATTGGTGTTGGTGGTTTGATTCAGGTCAATTTTTCGACCAAATGGATACTGACAGTTGAGTGTAAGATATCCAAAATAACTAAGTTGCTGATAGAATGTAAGCTTGTGTTGCAAGTAGATCTATCTGTTATAGGCATTATCATTGACCGCCCCATACCCCAAGGTAAACAATACTTTAGGAAGAGCACCTATCAGACTTGCTTTGGCATAAGAAGGAAGAATAAATGAAAATATATACCCAGAATTGAAATCATAGAAGAAAAAGGATTAAGCATATGCCCATAAAAGGAAGAGAAATTAGTGCATGTGTATGAAAGAGGAGAGAGTAGAAAAATAAAATAAAATAAAAAAGATAAGGACTCGAATCAACTTACACCATTACCTTAGACACTGGAAGAACAAATTAGGTACGGTAAAAATGTGACTTCCAGTTGGAGCTGTTAAACCAGAGAGTCATTGAACAAAGGGTCCAACAACTCTCATGGATTGAATCATTGGTCATTGTACATGTAGAAGATGAAAAATTAAGAGAATTGTTTGTCTATAGAACTACTTAATGGACTGTGATGAACATATGAAGTGCAAAAATTTGACTCACGAGAAGAAATTGAGGAGGAAGATAAGAGAGAGGAGAATGAGAGTGAGATACTGAGGGGTGGGGCGTCTGCTATTGAGGTTTCTGGAAAGGAGATGGCTAACTTAACGATGTCTCGGAATAAGAGTGGTTGAAGGTTAAGACATGTATATAGAAGTGGCAGTGGGCAGTTTATAATCAGTTGGTCAGATTGGTAGAGTAAAATATATTGAAAACTGAAACCAACCAACTCGTGTTATTTTCTTAGGGCATGTTTGGGAATGATTTTGACTGATTTGTTATTTTCTTATGCCATGTTTGGGAGTGGTTTTGGAAAATTACTTCCATACATGCCATGAAATTGGAAAAGCCGAAATTAAGTTAACCAACAGACCTATGAAACCAGTGTGTACCAACTTTGGTTTCAGTCTGTTTCCTTAATTTATTGAGTTTGACTTGCACCCTTAATTATTCAGTTGTGAGGAATTGGTCGAGCTTTTTGAAAAACAATCCAGCAGTCTTGCTGTTTCGGATTTAACTTCACCATATCTTGTTAGAATGGAAGGCACTGTAGTTTCTTTCATTTGATTATGCCAAGAGCTGAGCATGATGTTCAAATTTGTAATCTTGATAGGTAGTGGAAAATAATCTTAGTGGGGAAAACAATTCCCGTCCTAATTCTTTTGTGGGAATGTTCTTAACTTTATAATTAACTTTGTCAATTCAAATTTGTATTGGCCAGGAACCAGAGGAATTATTTGAAACCATCTCTCAAGCGCTGCTGTCTTCTGTGGATCGGGACTGTTTGAGTGGATGGGGAGGGCATGTCTATGTTGTGTAAGCCACGCGTTCTTGATTCTTGTTTAATCGTTGAGATATCTTTCTGGATTGTTTATTGGGTTTTTTCTGTTAAAAAATGAAAAAAAAGAAAAGTGGTTTGTTTATTGTTGTAAATTGTGATTATTCTGGTAGATGTTGCTTTTTCGAATATTTTGCATATCACCTGGGATAAAATGATAATATTTGTAATAGAATATTACTTTTTCTTGACACATATTAGCTCATCGTTTGTTATCGTAAAAATAACAATAATATTTGTAACAGAACTTGTTACGAGGCATTTTTGTTTAAAGTTGTGCAATTTATTAACTGTGTTTGAGGTATACATTATTTAGTCTCCTCTTTACATTTCCAATCTATATGATCCGTTGAGTGTAATTTTCAAATTGCACCCCTGTTGGTTTATGCTCTATCGTCTTTTGCTTTCTCTAGTCAATAATTTAAACCATTATGGGGCATCCAAAAATAACAATAATAATATTTTTCCAAAAAATATTAAACCATTATGTATGCCCCTGACAAACATTCCAAAAGTATCCTTTGGTATAATGCAGAATGGGTTTTTTCTTTCATTTCTACCTAATCCATTTTTTCCTTTTTGCCTTTTACCCTTATTTCTGTCGACCTTTTCCTGTCTTCCATTATATATTTGTGATTGAAATTATCCTATAATGTGTCTTTTTTCAGTACGCCAACTGAAGTAAAAGAGCGAATCTTGAAGGGACGAATGGATTGA

mRNA sequence

GGGGGAGAAGGGGTTGGAGTGAGGCCCAAGCCATTAATGGAGCTATACTAAAATCCACTCAGACTCTGGTTCCCGCATTTCTCTTTGCGATTCAACTCTCTCCTCTCTCAGATTTTCATACTTTGTTCCGGGGAAGCTTGAGTAGCGGACCTGATGTCGATCTTTGAGTATAATGGAAGTGCCGTAGTTGCGATGGTGGGGAAGAATTGTTTTGCCATTGCTAGCGATCGTAGGTTTGGAGTTCAGCTTCAGACAATTGCCACGGATTTCCAGAAAATTTACCGGATTCATGATAAGCTATTTCTTGGCCTTTCGGGCCTCGGTACCGATGCTCAGACACTGTATCAACGACTTGTCTATCAGCACAAACTATACCAGCTTCGAGAAGAGAGGGACATGAAACCTGAGACATTTGCTAGCCTTGTCTCAGCTCGTCTTTATGAGAAAAGATTTGGTCCATACTTCTGCCAGCCTGTAATTGCTGGATTGAGTGATGAAGACAAACCCTTCATTTGCACAATGGATTGCATTGGGGCCAAAGAGCTTGCTAAGGATTTTGTTGTTTCTGGCACTGCATCAGAGTCCCTTTATGGTGCGTGTGAGGCAATGTTTAAACCTGACCTGGAACCAGAGGAATTATTTGAAACCATCTCTCAAGCGCTGCTGTCTTCTGTGGATCGGGACTGTTTGAGTGGATGGGGAGGGCATGTCTATGTTGTTACGCCAACTGAAGTAAAAGAGCGAATCTTGAAGGGACGAATGGATTGA

Coding sequence (CDS)

ATGTCGATCTTTGAGTATAATGGAAGTGCCGTAGTTGCGATGGTGGGGAAGAATTGTTTTGCCATTGCTAGCGATCGTAGGTTTGGAGTTCAGCTTCAGACAATTGCCACGGATTTCCAGAAAATTTACCGGATTCATGATAAGCTATTTCTTGGCCTTTCGGGCCTCGGTACCGATGCTCAGACACTGTATCAACGACTTGTCTATCAGCACAAACTATACCAGCTTCGAGAAGAGAGGGACATGAAACCTGAGACATTTGCTAGCCTTGTCTCAGCTCGTCTTTATGAGAAAAGATTTGGTCCATACTTCTGCCAGCCTGTAATTGCTGGATTGAGTGATGAAGACAAACCCTTCATTTGCACAATGGATTGCATTGGGGCCAAAGAGCTTGCTAAGGATTTTGTTGTTTCTGGCACTGCATCAGAGTCCCTTTATGGTGCGTGTGAGGCAATGTTTAAACCTGACCTGGAACCAGAGGAATTATTTGAAACCATCTCTCAAGCGCTGCTGTCTTCTGTGGATCGGGACTGTTTGAGTGGATGGGGAGGGCATGTCTATGTTGTTACGCCAACTGAAGTAAAAGAGCGAATCTTGAAGGGACGAATGGATTGA

Homology

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BLAST of CmoCh04G024900 vs. Swiss-Prot
Match: PSB3A_ARATH (Proteasome subunit beta type-3-A OS=Arabidopsis thaliana GN=PBC1 PE=1 SV=2)

HSP 1 Score: 382.5 bits (981), Expect = 2.9e-105
Identity = 183/204 (89.71%), Postives = 195/204 (95.59%), Query Frame = 1


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRR GVQLQTIATDFQ+I +IHD++F+GLSGL TD 
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDV 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLYQRLV++HKLYQLREERDMKPETFASLVSA LYEKRFGPY CQPVIAGL D+DKPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFI 120

Query: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDLEPEELFETISQALLSSVDRDCLS 180
           CTMD IGAKELAKDFVVSGTASESLYGACEAM+KPD+E EELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMYKPDMEAEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGGHVY+VTPTE+KERILKGRMD
Sbjct: 181 GWGGHVYIVTPTEIKERILKGRMD 204

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BLAST of CmoCh04G024900 vs. Swiss-Prot
Match: PSB3B_ARATH (Proteasome subunit beta type-3-B OS=Arabidopsis thaliana GN=PBC2 PE=1 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 4.2e-104
Identity = 184/204 (90.20%), Postives = 193/204 (94.61%), Query Frame = 1


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRR GVQLQTIATDFQ+I +IHD LF+GLSGL TD 
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDV 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLYQRLV++HKLYQLREERDMKPETFASLVSA LYEKRFGP+ CQPVIAGL D++KPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFI 120

Query: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDLEPEELFETISQALLSSVDRDCLS 180
           CTMD IGAKELAKDFVVSGTASESLYGACEAMFKPD+E EELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGGHVYVVTP EVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPKEVKERILKGRMD 204

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BLAST of CmoCh04G024900 vs. Swiss-Prot
Match: PSB3_ORYSJ (Proteasome subunit beta type-3 OS=Oryza sativa subsp. japonica GN=PBC1 PE=2 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 1.8e-102
Identity = 175/204 (85.78%), Postives = 196/204 (96.08%), Query Frame = 1


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRR GVQLQT+ATDFQ++++IHDKL++GLSGL TDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLYQRLV++HKLYQLREERDMKP+TFASLVSA LYEKRFGPYFCQPVIAGL ++++PFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGEDNEPFI 120

Query: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDLEPEELFETISQALLSSVDRDCLS 180
           CTMDCIGAKELAKDFVVSGTASESLYGACE+M+KP++EPEELFETISQAL SSVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGG V +VTPTEVKE ++KGRMD
Sbjct: 181 GWGGFVLLVTPTEVKECVIKGRMD 204

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BLAST of CmoCh04G024900 vs. Swiss-Prot
Match: PSB3_PICMA (Proteasome subunit beta type-3 OS=Picea mariana GN=PBC1 PE=2 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 2.5e-101
Identity = 173/204 (84.80%), Postives = 193/204 (94.61%), Query Frame = 1


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSA+VAMVGKNCFAIASDRR GVQLQTIATDFQ+I++IHDKL++GLSGL TD 
Sbjct: 1   MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRIFKIHDKLYVGLSGLATDV 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLYQR  ++HKLYQLREER+M+PETFASLVSA LYEKRFGPYFCQPVIAGL ++DKPFI
Sbjct: 61  QTLYQRFAFRHKLYQLREERNMRPETFASLVSALLYEKRFGPYFCQPVIAGLGEDDKPFI 120

Query: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDLEPEELFETISQALLSSVDRDCLS 180
           CTMD IGAKELAKDFVV+GTA+ESLYGACE+M+KPD+EPEELFETISQALLSS+DRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVAGTAAESLYGACESMYKPDMEPEELFETISQALLSSIDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGGHVYVV+P +V ER LKGRMD
Sbjct: 181 GWGGHVYVVSPNQVIERTLKGRMD 204

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BLAST of CmoCh04G024900 vs. Swiss-Prot
Match: PSB3_SCHPO (Probable proteasome subunit beta type-3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pup3 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.7e-68
Identity = 119/204 (58.33%), Postives = 160/204 (78.43%), Query Frame = 1


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSI EYNG + VAM GKNC AIASD R GVQ  ++  +F K++ + DK +LGL+GL TD 
Sbjct: 1   MSIMEYNGGSCVAMAGKNCVAIASDLRLGVQSISLTNNFPKVFAMGDKTYLGLTGLATDV 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLY+   Y+  LY+ REER ++P+TFA+LVS+ LYEKRFGPYF  PV+AG+S+++ PFI
Sbjct: 61  QTLYELFRYKVNLYKFREERQIQPKTFANLVSSTLYEKRFGPYFSFPVVAGVSNDNTPFI 120

Query: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDLEPEELFETISQALLSSVDRDCLS 180
           C  D IG  + A+DF+VSGTA+E LYG CE++++P+LEP++LFETISQALL++ DRDC+S
Sbjct: 121 CGFDSIGCIDFAEDFIVSGTATEQLYGMCESVYEPNLEPDDLFETISQALLNAQDRDCIS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWG  VYV+T  +  +R++KGR D
Sbjct: 181 GWGCVVYVITADKCIKRLVKGRQD 204

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BLAST of CmoCh04G024900 vs. TrEMBL
Match: A0A0A0KDS4_CUCSA (Proteasome subunit beta type OS=Cucumis sativus GN=Csa_6G382910 PE=3 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 4.7e-110
Identity = 198/204 (97.06%), Postives = 201/204 (98.53%), Query Frame = 1


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRR GVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLYQRLV++HKLYQLREERDMKPETFASLVSA LYEKRFGPYFCQPVIAGLSDEDKPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYFCQPVIAGLSDEDKPFI 120

Query: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDLEPEELFETISQALLSSVDRDCLS 180
           CTMD IGAKELAKDFVVSGTASESLYGACEAMFKPD+EPEELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of CmoCh04G024900 vs. TrEMBL
Match: E0CR38_VITVI (Proteasome subunit beta type OS=Vitis vinifera GN=VIT_18s0001g02260 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 2.2e-107
Identity = 190/204 (93.14%), Postives = 199/204 (97.55%), Query Frame = 1


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSA++AMVGKNCFAIASDRRFGVQLQT+ATDFQKIYRIHD++FLGLSGL TDA
Sbjct: 1   MSIFEYNGSALIAMVGKNCFAIASDRRFGVQLQTVATDFQKIYRIHDRVFLGLSGLATDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLYQRLV++HKLYQLREERDMKPETFASLVSA LYEKRFGPYFCQPVIAGL DEDKPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFI 120

Query: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDLEPEELFETISQALLSSVDRDCLS 180
           CTMD IGAKELAKDFVV+GTASESLYGACEAMFKPD+EPEELFE ISQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVAGTASESLYGACEAMFKPDMEPEELFEIISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of CmoCh04G024900 vs. TrEMBL
Match: C6SV91_SOYBN (Proteasome subunit beta type OS=Glycine max GN=GLYMA_13G031200 PE=2 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 2.8e-107
Identity = 191/204 (93.63%), Postives = 198/204 (97.06%), Query Frame = 1


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRR GVQLQTIATDFQ+I +IHDKLF+ LSGL TDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIALSGLATDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLYQRLV++HKLYQLREERDMKPETFASLVSA LYEKRFGPYFCQPVIAGL DEDKPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFI 120

Query: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDLEPEELFETISQALLSSVDRDCLS 180
           CTMDC+GAKELAKDFVVSGTASESLYGACEAMFKPD+EPEELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDCLGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of CmoCh04G024900 vs. TrEMBL
Match: A0A0B2PC27_GLYSO (Proteasome subunit beta type OS=Glycine soja GN=glysoja_028090 PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 2.8e-107
Identity = 191/204 (93.63%), Postives = 198/204 (97.06%), Query Frame = 1


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRR GVQLQTIATDFQ+I +IHDKLF+ LSGL TDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIALSGLATDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLYQRLV++HKLYQLREERDMKPETFASLVSA LYEKRFGPYFCQPVIAGL DEDKPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFI 120

Query: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDLEPEELFETISQALLSSVDRDCLS 180
           CTMDC+GAKELAKDFVVSGTASESLYGACEAMFKPD+EPEELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDCLGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of CmoCh04G024900 vs. TrEMBL
Match: I3S150_LOTJA (Proteasome subunit beta type OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 6.3e-107
Identity = 187/204 (91.67%), Postives = 199/204 (97.55%), Query Frame = 1


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSA+VAMVGKNCFAIASDRR GVQLQT+ATDFQ+I+++HDKLF+ LSGL TDA
Sbjct: 1   MSIFEYNGSAIVAMVGKNCFAIASDRRLGVQLQTVATDFQRIFKVHDKLFIALSGLATDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLYQRLV++HKLYQLREERDMKPETFASLVSA LYEKRFGPYFCQPVIAGL DEDKPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFI 120

Query: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDLEPEELFETISQALLSSVDRDCLS 180
           CTMDCIGAKELAKDFVV+G+ASESLYGACEAMFKPD+EPEELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVAGSASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of CmoCh04G024900 vs. TAIR10
Match: AT1G21720.1 (AT1G21720.1 proteasome beta subunit C1)

HSP 1 Score: 382.5 bits (981), Expect = 1.6e-106
Identity = 183/204 (89.71%), Postives = 195/204 (95.59%), Query Frame = 1


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRR GVQLQTIATDFQ+I +IHD++F+GLSGL TD 
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDV 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLYQRLV++HKLYQLREERDMKPETFASLVSA LYEKRFGPY CQPVIAGL D+DKPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFI 120

Query: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDLEPEELFETISQALLSSVDRDCLS 180
           CTMD IGAKELAKDFVVSGTASESLYGACEAM+KPD+E EELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMYKPDMEAEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGGHVY+VTPTE+KERILKGRMD
Sbjct: 181 GWGGHVYIVTPTEIKERILKGRMD 204

[Close]

BLAST of CmoCh04G024900 vs. TAIR10
Match: AT1G77440.1 (AT1G77440.1 20S proteasome beta subunit C2)

HSP 1 Score: 378.6 bits (971), Expect = 2.4e-105
Identity = 184/204 (90.20%), Postives = 193/204 (94.61%), Query Frame = 1


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRR GVQLQTIATDFQ+I +IHD LF+GLSGL TD 
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDV 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLYQRLV++HKLYQLREERDMKPETFASLVSA LYEKRFGP+ CQPVIAGL D++KPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFI 120

Query: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDLEPEELFETISQALLSSVDRDCLS 180
           CTMD IGAKELAKDFVVSGTASESLYGACEAMFKPD+E EELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGGHVYVVTP EVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPKEVKERILKGRMD 204

[Close]

BLAST of CmoCh04G024900 vs. TAIR10
Match: AT3G60820.1 (AT3G60820.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein)

HSP 1 Score: 90.1 bits (222), Expect = 1.7e-18
Identity = 57/216 (26.39%), Postives = 98/216 (45.37%), Query Frame = 1


Query: 2   SIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQ 61
           S ++ NG   VA+ G +   IA+D R       ++ D+ KI+++ D+  L  SG   D +
Sbjct: 9   SPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVK 68

Query: 62  TLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
            L + L  +H +YQ +  + M     A L+S  LY KRF PY+   V+ GL +E K  + 
Sbjct: 69  ALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVF 128

Query: 122 TMDCIGAKELAKDFVVSGTASESLYGACEAMFK---PDLEPE----------ELFETISQ 181
           T D +G+ E    +   G+ S  +    +   K   P L P+          E  + +  
Sbjct: 129 TYDAVGSYERV-GYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKT 188

Query: 182 ALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 205
              S+ +RD  +G    + ++    +K  ++  R D
Sbjct: 189 VFASATERDIYTGDKLEIMILKADGIKTELMDLRKD 223

[Close]

BLAST of CmoCh04G024900 vs. NCBI nr
Match: gi|449464176|ref|XP_004149805.1| (PREDICTED: proteasome subunit beta type-3-A [Cucumis sativus])

HSP 1 Score: 405.2 bits (1040), Expect = 6.7e-110
Identity = 198/204 (97.06%), Postives = 201/204 (98.53%), Query Frame = 1


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRR GVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLYQRLV++HKLYQLREERDMKPETFASLVSA LYEKRFGPYFCQPVIAGLSDEDKPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYFCQPVIAGLSDEDKPFI 120

Query: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDLEPEELFETISQALLSSVDRDCLS 180
           CTMD IGAKELAKDFVVSGTASESLYGACEAMFKPD+EPEELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of CmoCh04G024900 vs. NCBI nr
Match: gi|225459609|ref|XP_002285871.1| (PREDICTED: proteasome subunit beta type-3-A [Vitis vinifera])

HSP 1 Score: 396.4 bits (1017), Expect = 3.1e-107
Identity = 190/204 (93.14%), Postives = 199/204 (97.55%), Query Frame = 1


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSA++AMVGKNCFAIASDRRFGVQLQT+ATDFQKIYRIHD++FLGLSGL TDA
Sbjct: 1   MSIFEYNGSALIAMVGKNCFAIASDRRFGVQLQTVATDFQKIYRIHDRVFLGLSGLATDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLYQRLV++HKLYQLREERDMKPETFASLVSA LYEKRFGPYFCQPVIAGL DEDKPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFI 120

Query: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDLEPEELFETISQALLSSVDRDCLS 180
           CTMD IGAKELAKDFVV+GTASESLYGACEAMFKPD+EPEELFE ISQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVAGTASESLYGACEAMFKPDMEPEELFEIISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of CmoCh04G024900 vs. NCBI nr
Match: gi|351721818|ref|NP_001237990.1| (uncharacterized protein LOC100499664 [Glycine max])

HSP 1 Score: 396.0 bits (1016), Expect = 4.1e-107
Identity = 191/204 (93.63%), Postives = 198/204 (97.06%), Query Frame = 1


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRR GVQLQTIATDFQ+I +IHDKLF+ LSGL TDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIALSGLATDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLYQRLV++HKLYQLREERDMKPETFASLVSA LYEKRFGPYFCQPVIAGL DEDKPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFI 120

Query: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDLEPEELFETISQALLSSVDRDCLS 180
           CTMDC+GAKELAKDFVVSGTASESLYGACEAMFKPD+EPEELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDCLGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of CmoCh04G024900 vs. NCBI nr
Match: gi|950995228|ref|XP_014505336.1| (PREDICTED: proteasome subunit beta type-3-A [Vigna radiata var. radiata])

HSP 1 Score: 394.8 bits (1013), Expect = 9.0e-107
Identity = 190/204 (93.14%), Postives = 198/204 (97.06%), Query Frame = 1


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRR GVQLQTIATDFQ+I RIHDKLF+ LSGL TDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISRIHDKLFIALSGLATDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLYQRLV++HKLYQLREERDMKPETFASLVSA LYEKRFGPYFCQPVIAGL D+DKPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDDKPFI 120

Query: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDLEPEELFETISQALLSSVDRDCLS 180
           CTMDC+GAKELAKDFVVSGTASESLYGACE+MFKPD+EPEELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDCLGAKELAKDFVVSGTASESLYGACESMFKPDMEPEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of CmoCh04G024900 vs. NCBI nr
Match: gi|571505476|ref|XP_006595528.1| (PREDICTED: uncharacterized protein LOC100527027 isoform X1 [Glycine max])

HSP 1 Score: 394.8 bits (1013), Expect = 9.0e-107
Identity = 191/204 (93.63%), Postives = 197/204 (96.57%), Query Frame = 1


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRR GVQLQTIATDFQ+I +IHDKLF+ LSGL TDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDKLFIALSGLATDA 60

Query: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTLYQRLV++HKLYQLREERDMKPETFASLVSA LYEKRFGPYFCQPVIAGL DEDKPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFI 120

Query: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDLEPEELFETISQALLSSVDRDCLS 180
           CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPD+EPEELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGGHVYVVTP EVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPNEVKERILKGRMD 204

The following BLAST results are available for this feature:

BLAST of CmoCh04G024900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PSB3A_ARATH	2.9e-105	89.71	Proteasome subunit beta type-3-A OS=Arabidopsis thaliana GN=PBC1 PE=1 SV=2	[more]
PSB3B_ARATH	4.2e-104	90.20	Proteasome subunit beta type-3-B OS=Arabidopsis thaliana GN=PBC2 PE=1 SV=1	[more]
PSB3_ORYSJ	1.8e-102	85.78	Proteasome subunit beta type-3 OS=Oryza sativa subsp. japonica GN=PBC1 PE=2 SV=1	[more]
PSB3_PICMA	2.5e-101	84.80	Proteasome subunit beta type-3 OS=Picea mariana GN=PBC1 PE=2 SV=1	[more]
PSB3_SCHPO	1.7e-68	58.33	Probable proteasome subunit beta type-3 OS=Schizosaccharomyces pombe (strain 972...	[more]

BLAST of CmoCh04G024900 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDS4_CUCSA	4.7e-110	97.06	Proteasome subunit beta type OS=Cucumis sativus GN=Csa_6G382910 PE=3 SV=1	[more]
E0CR38_VITVI	2.2e-107	93.14	Proteasome subunit beta type OS=Vitis vinifera GN=VIT_18s0001g02260 PE=3 SV=1	[more]
C6SV91_SOYBN	2.8e-107	93.63	Proteasome subunit beta type OS=Glycine max GN=GLYMA_13G031200 PE=2 SV=1	[more]
A0A0B2PC27_GLYSO	2.8e-107	93.63	Proteasome subunit beta type OS=Glycine soja GN=glysoja_028090 PE=3 SV=1	[more]
I3S150_LOTJA	6.3e-107	91.67	Proteasome subunit beta type OS=Lotus japonicus PE=2 SV=1	[more]

BLAST of CmoCh04G024900 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G21720.1	1.6e-106	89.71	proteasome beta subunit C1	[more]
AT1G77440.1	2.4e-105	90.20	20S proteasome beta subunit C2	[more]
AT3G60820.1	1.7e-18	26.39	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily ...	[more]

BLAST of CmoCh04G024900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464176\|ref\|XP_004149805.1\|	6.7e-110	97.06	PREDICTED: proteasome subunit beta type-3-A [Cucumis sativus]	[more]
gi\|225459609\|ref\|XP_002285871.1\|	3.1e-107	93.14	PREDICTED: proteasome subunit beta type-3-A [Vitis vinifera]	[more]
gi\|351721818\|ref\|NP_001237990.1\|	4.1e-107	93.63	uncharacterized protein LOC100499664 [Glycine max]	[more]
gi\|950995228\|ref\|XP_014505336.1\|	9.0e-107	93.14	PREDICTED: proteasome subunit beta type-3-A [Vigna radiata var. radiata]	[more]
gi\|571505476\|ref\|XP_006595528.1\|	9.0e-107	93.63	PREDICTED: uncharacterized protein LOC100527027 isoform X1 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001353	Proteasome_sua/b
IPR016050	Proteasome_bsu_CS
IPR023333	Proteasome_suB-type

Vocabulary: **Molecular Function**
Term	Definition
GO:0004298	threonine-type endopeptidase activity
GO:0004175	endopeptidase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005839	proteasome core complex

Vocabulary: **Biological Process**
Term	Definition
GO:0051603	proteolysis involved in cellular protein catabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0051603	proteolysis involved in cellular protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005839	proteasome core complex
cellular_component	GO:0019774	proteasome core complex, beta-subunit complex
molecular_function	GO:0004298	threonine-type endopeptidase activity
molecular_function	GO:0004175	endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G024900.1	CmoCh04G024900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001353	Proteasome, subunit alpha/beta	PFAM	PF00227	Proteasome	coord: 7..189 score: 4.0
IPR016050	Proteasome beta-type subunit, conserved site	PROSITE	PS00854	PROTEASOME_BETA_1	coord: 12..59 scor
IPR023333	Proteasome B-type subunit	PROFILE	PS51476	PROTEASOME_BETA_2	coord: 8..189 score: 48
None	No IPR available	PANTHER	PTHR11599	PROTEASOME SUBUNIT ALPHA/BETA	coord: 1..204 score: 2.9E
None	No IPR available	PANTHER	PTHR11599:SF62	PROTEASOME SUBUNIT BETA TYPE-3	coord: 1..204 score: 2.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G024900	Cucsa.060570	Cucumber (Gy14) v1	cgycmoB0079
CmoCh04G024900	CmaCh15G006630	Cucurbita maxima (Rimu)	cmacmoB309
CmoCh04G024900	CmaCh04G023770	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G024900	Cla013919	Watermelon (97103) v1	cmowmB661
CmoCh04G024900	Csa6G382910	Cucumber (Chinese Long) v2	cmocuB761
CmoCh04G024900	MELO3C010635	Melon (DHL92) v3.5.1	cmomeB672
CmoCh04G024900	ClCG08G005890	Watermelon (Charleston Gray)	cmowcgB680
CmoCh04G024900	CSPI06G20180	Wild cucumber (PI 183967)	cmocpiB770
CmoCh04G024900	Cp4.1LG13g04440	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G024900	Cp4.1LG01g20640	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G024900	CsaV3_6G034220	Cucumber (Chinese Long) v3	cmocucB0900
CmoCh04G024900	Cla97C08G148650	Watermelon (97103) v2	cmowmbB760
CmoCh04G024900	Bhi04G001497	Wax gourd	cmowgoB0865
CmoCh04G024900	CsGy6G019660	Cucumber (Gy14) v2	cgybcmoB817

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G024900	CmoCh15G006720	Cucurbita moschata (Rifu)	cmocmoB262

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G024900	Cucumber (Gy14) v2	cgybcmoB523
CmoCh04G024900	Melon (DHL92) v3.6.1	cmomedB760
CmoCh04G024900	Melon (DHL92) v3.6.1	cmomedB792
CmoCh04G024900	Silver-seed gourd	carcmoB1121
CmoCh04G024900	Cucumber (Chinese Long) v3	cmocucB0835
CmoCh04G024900	Watermelon (97103) v2	cmowmbB701
CmoCh04G024900	Wax gourd	cmowgoB0915
CmoCh04G024900	Cucurbita moschata (Rifu)	cmocmoB030
CmoCh04G024900	Cucurbita moschata (Rifu)	cmocmoB366
CmoCh04G024900	Cucurbita moschata (Rifu)	cmocmoB367
CmoCh04G024900	Cucurbita maxima (Rimu)	cmacmoB059
CmoCh04G024900	Cucurbita maxima (Rimu)	cmacmoB482
CmoCh04G024900	Wild cucumber (PI 183967)	cmocpiB718
CmoCh04G024900	Cucumber (Chinese Long) v2	cmocuB708
CmoCh04G024900	Melon (DHL92) v3.5.1	cmomeB698
CmoCh04G024900	Watermelon (Charleston Gray)	cmowcgB626
CmoCh04G024900	Watermelon (97103) v1	cmowmB726
CmoCh04G024900	Cucurbita pepo (Zucchini)	cmocpeB697
CmoCh04G024900	Cucurbita pepo (Zucchini)	cmocpeB709
CmoCh04G024900	Bottle gourd (USVL1VR-Ls)	cmolsiB664
CmoCh04G024900	Bottle gourd (USVL1VR-Ls)	cmolsiB697