CmoCh04G022810 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAGATAGAATAGGTGAACAGATATTGATCAACACAACCAAAGCCACGGCATATTGAAGTTATCCGGTGAAATTTCTTGCAGATGACAGCCATGGCCTCCGCCGTTCCAATGGGTGTGTTGGGCACTTTGCCTTCTCCCTCACAGGTTCTCTTCCATCTCCCACTGTGCTTCCAACTTTACTACACCTGCATTTGCGTTGTTCATATCAGATTCCAAGTTTCATCTGTTCTTCGTAACATGAAGTCGTCTGATTCGTGTTATTTTTGTTTAATTCTGTTCTTCTCATCCCAATGTTGATTTGTTTCATGTACAGGGGCGATATTGCTTACCCTCGTTGAAGTCTACAAAAACTCAACTGATATGTAGTTCTACGAGTTTGGTACCAATTTCATTGCAAGTTCGATCTATGAACTCCCCTGTAAGAACACTGACATGGGGATCTCGACGCTCGAGTTTTCCTATCTTGAGAGAAGCGTTTCCCGTGAAGAACAGAAGACTCGTCTGTGCAAACACCGCGGCAAAAGTAAATGAGTTATTATGCTCGATTCCTTCTTAGTTTTGAATTTATTCTGTCCACTGGCTGAAAGAAAAGGGGAAACTATTCCGTCTCATGTTATGAGTTTAGATTGAAATAAAGATTTTCTAGTGCAGTATATGTGTTGTACACGTATAGCTTTTCAACTTAGAAGGGATTAGATATTTTAATGTTTGTTGATTGAGTTGATTCTTTGTTCAGAAATTTTCTGCGTTGTTGTTATTGATTATGTCCTCATATTAGTCATCTGTTTTGTTAATCTTAAATGTTATATTTTCTATGAATGTAGGATGTTTATCTTAATTGGTATCTGAATGTTTCCTATAAAACAATGTAGGACGTAGAGCTGCAAGCAGAAGTATCAACTAAGTGCTTTTTCGATGTAGAAATTGGAGGTGAACCAGCAGGTAGAATCGTGATAGGACTTTTTGCAGATGTTGTTCCAAGAACTGTTGAGAATTTCCGAGCCTTGTGCACAGGCAAGTTGGAACGCCACCTTCTTCTTAATGATTTTTGTTAAAAAAAAAAAAAAAATTTGACTTCTTCTTGGAGAATAATTTTCCCACTTGGTTCATTGATAATCAAATAAAGTATCATGGTGCAGGAGAGAAGGGATATGGGTATAAAGGATGTTCCTTCCATAGGGTGATAAAAGATTTTATGATTCAAGGAGGGGACTTCACTAATGGAGATGTACTCACTCTTTCTCTCTGAACGTATATACACTTATATGTACTTATATGTGTATATACTAAATACCTATACACACAAATGGAATCCTAGGCTTTCTGGAAAAGAAGCCTCCAATCTGATTTAAGCTGTATTGTTGTTATTTTTGCTGCAGGGAACTGGAGGTATTAGTATCTATGGTCCCAGTTTTCGAGACGAGAATTTTTCATGTATGTCATGACTATTTATCTATATGACCGTTGTGATTCTGGAACGGTTAACCTTTTGGTATCAGCTTCTGGGTAGAAGTATGTCAGGAAATAAAAATAAAGCTGCAACGGCACCTAATACTATTTGACTTATTTGCAGTGAAGCATGTAGGGCCTGGTGTACTTAGCATGGCCAATGCCGGACCTAATACTAATGGAAGCCAATTCTTCATCTGCACTGTTTCGGTAATTCAACTTCTGCAGCCTATTGCTTTGAACATGAATGGAATTGTTCCTCTTTCATTTCAATAACTTTGGTTTGCAATTCTTTTCTGTTTAAGACACAAAGTTTAATTGTAGAAAAGTATCTATAGAGTTGTAGTGGGACTTGATAAAGAAACTCAAACTACTAATCATAACGAGTAAAAATCTGACCCTGAAAAAAATGACTTAGTATGAGGATTGGATGCTGGTTATTTGTTGCATCGATTAGGACTTTATCTTGTTGAAAATCAGGTCATATATGATTGCAAAAGAATGAATGAGATTGATCTAAGCTTGATTTATAAAGGGTCTATTAGTGGATTGTTATTTTTGTTTATTATCCTCCAAACTAAGGAGATCTTCTGTTCAAAACACTTTAGGACTAAAGAATTAGCTAATGATCTAGACAATCAACTACTAGAGCAGATTTAGGAACATCTGTTCCTTGGTCGAGGATGTCCTTTATGTTCTACAGTGTTGGGGAATGGACATACTGTGGTGAAGGTATATAGGGGCTTCTTTCGTATAAATCACCCTCAGTTTGCAGATAGTATTTGATTTTCTCCTCCTTCGAGCCTGCCAAAAAATTCATAATCTACTCCATGTTTTCAAACTCTATGATTCAAGTTTAGAGACCTTTTCTTTTTATATATCCTCTTCTTTTAATAGAAATAGTTTCTTATTAGAAAAAATGATTGGTTTCCATGTATTATATATCAAAATAAGGGAAACTTGCTATTCTTGGATGGCAAATTAGATTATGAGTTCTAGACATGAAATATCTTGGAAAGCTGAACTGATGTTCATATGTTCATTGAATTCTTGAACTGAAAGCAATCATATGAATTATTGAATTCAAAGCATGCTTTTTTTTTTGTCTCAGCATAACATTTTGTTAACATAGATTTCTTTTACTCCACGTCTCTGTCAATAATTAATGCATCTACATTTTGCATCAAATAGACTCCTTGGTTGGACAATCGCCATGTTGTGTTTGGACACGTTATCGAAGGAATGGATGTTGTGCGAAAAATTGAATCACAAGAAACAAGCAGATTAGATATTCCTCGCTTGCCATGCAGAATTGTTAATTGCGGAGAACTAAAGGCTGACGGATGATGATTGATTAGCCCTGTTGTAACTGTAGCTATTAAGTTTTTTGAGGCTTAGGTATGCACACGATTAACATTATTAGTTCTGAGTAGAGAATATTATGGAATTGTTGATTGTTGGGAATCACATATATATTGAGGGATGATAAGGCCTCTTGTATTCTCTAGTAACTGATGTATCTTTGTGATCTATTTTCATCTTTAAAATTCCTGTTCTACATTTAAATTTTTTTAGCGTGGTCGACACGTGAGACTCAGTGCTGTTATCTATGAGTATCGAGAAATGTATTATGATTGCAGCAATACCATAGTTAAAACTGTAAGCTATTAGTAGATTGAGAACTGCTACAGCATATTCATAGGTAACAGAGAAACAAATGAAGTACAAATTCGTCTAAATAGCCACCCATGTGGGCGTGAGGTACAGTTCTTTGGTATGAATTAGTTCCACATTAAGTAACAAAGCTTGCAG AAGAGATAGAATAGGTGAACAGATATTGATCAACACAACCAAAGCCACGGCATATTGAAGTTATCCGGTGAAATTTCTTGCAGATGACAGCCATGGCCTCCGCCGTTCCAATGGGTGTGTTGGGCACTTTGCCTTCTCCCTCACAGGGGCGATATTGCTTACCCTCGTTGAAGTCTACAAAAACTCAACTGATATGTAGTTCTACGAGTTTGGTACCAATTTCATTGCAAGTTCGATCTATGAACTCCCCTGTAAGAACACTGACATGGGGATCTCGACGCTCGAGTTTTCCTATCTTGAGAGAAGCGTTTCCCGTGAAGAACAGAAGACTCGTCTGTGCAAACACCGCGGCAAAAGACGTAGAGCTGCAAGCAGAAGTATCAACTAAGTGCTTTTTCGATGTAGAAATTGGAGGTGAACCAGCAGGTAGAATCGTGATAGGACTTTTTGCAGATGTTGTTCCAAGAACTGTTGAGAATTTCCGAGCCTTGTGCACAGGAGAGAAGGGATATGGGTATAAAGGATGTTCCTTCCATAGGGTGATAAAAGATTTTATGATTCAAGGAGGGGACTTCACTAATGGAGATGGAACTGGAGGTATTAGTATCTATGGTCCCAGTTTTCGAGACGAGAATTTTTCATTGAAGCATGTAGGGCCTGGTGTACTTAGCATGGCCAATGCCGGACCTAATACTAATGGAAGCCAATTCTTCATCTGCACTGTTTCGACTCCTTGGTTGGACAATCGCCATGTTGTGTTTGGACACGTTATCGAAGGAATGGATGTTGTGCGAAAAATTGAATCACAAGAAACAAGCAGATTAGATATTCCTCGCTTGCCATGCAGAATTGTTAATTGCGGAGAACTAAAGGCTGACGGATGATGATTGATTAGCCCTGTTGTAACTGTAGCTATTAAGTTTTTTGAGGCTTAGGTATGCACACGATTAACATTATTAGTTCTGAGTAGAGAATATTATGGAATTGTTGATTGTTGGGAATCACATATATATTGAGGGATGATAAGGCCTCTTGTATTCTCTAGTAACTGATGTATCTTTGTGATCTATTTTCATCTTTAAAATTCCTGTTCTACATTTAAATTTTTTTAGCGTGGTCGACACGTGAGACTCAGTGCTGTTATCTATGAGTATCGAGAAATGTATTATGATTGCAGCAATACCATAGTTAAAACTGTAAGCTATTAGTAGATTGAGAACTGCTACAGCATATTCATAGGTAACAGAGAAACAAATGAAGTACAAATTCGTCTAAATAGCCACCCATGTGGGCGTGAGGTACAGTTCTTTGGTATGAATTAGTTCCACATTAAGTAACAAAGCTTGCAG ATGACAGCCATGGCCTCCGCCGTTCCAATGGGTGTGTTGGGCACTTTGCCTTCTCCCTCACAGGGGCGATATTGCTTACCCTCGTTGAAGTCTACAAAAACTCAACTGATATGTAGTTCTACGAGTTTGGTACCAATTTCATTGCAAGTTCGATCTATGAACTCCCCTGTAAGAACACTGACATGGGGATCTCGACGCTCGAGTTTTCCTATCTTGAGAGAAGCGTTTCCCGTGAAGAACAGAAGACTCGTCTGTGCAAACACCGCGGCAAAAGACGTAGAGCTGCAAGCAGAAGTATCAACTAAGTGCTTTTTCGATGTAGAAATTGGAGGTGAACCAGCAGGTAGAATCGTGATAGGACTTTTTGCAGATGTTGTTCCAAGAACTGTTGAGAATTTCCGAGCCTTGTGCACAGGAGAGAAGGGATATGGGTATAAAGGATGTTCCTTCCATAGGGTGATAAAAGATTTTATGATTCAAGGAGGGGACTTCACTAATGGAGATGGAACTGGAGGTATTAGTATCTATGGTCCCAGTTTTCGAGACGAGAATTTTTCATTGAAGCATGTAGGGCCTGGTGTACTTAGCATGGCCAATGCCGGACCTAATACTAATGGAAGCCAATTCTTCATCTGCACTGTTTCGACTCCTTGGTTGGACAATCGCCATGTTGTGTTTGGACACGTTATCGAAGGAATGGATGTTGTGCGAAAAATTGAATCACAAGAAACAAGCAGATTAGATATTCCTCGCTTGCCATGCAGAATTGTTAATTGCGGAGAACTAAAGGCTGACGGATGA
BLAST of CmoCh04G022810 vs. Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 2.7e-79 Identity = 149/256 (58.20%), Postives = 182/256 (71.09%), Query Frame = 1
BLAST of CmoCh04G022810 vs. Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 8.0e-79 Identity = 138/195 (70.77%), Postives = 163/195 (83.59%), Query Frame = 1
BLAST of CmoCh04G022810 vs. Swiss-Prot
Match: PNSL5_ARATH (Photosynthetic NDH subunit of lumenal location 5, chloroplastic OS=Arabidopsis thaliana GN=PNSL5 PE=1 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 2.2e-68 Identity = 124/196 (63.27%), Postives = 152/196 (77.55%), Query Frame = 1
BLAST of CmoCh04G022810 vs. Swiss-Prot
Match: PPIB_ORPSP (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) GN=CYPB PE=1 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 1.8e-62 Identity = 113/165 (68.48%), Postives = 130/165 (78.79%), Query Frame = 1
BLAST of CmoCh04G022810 vs. Swiss-Prot
Match: PPIB_CRYNB (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=CPR2 PE=3 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 3.0e-62 Identity = 114/170 (67.06%), Postives = 131/170 (77.06%), Query Frame = 1
BLAST of CmoCh04G022810 vs. TrEMBL
Match: A0A0A0KJM6_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_5G128260 PE=3 SV=1) HSP 1 Score: 443.4 bits (1139), Expect = 2.0e-121 Identity = 217/260 (83.46%), Postives = 229/260 (88.08%), Query Frame = 1
BLAST of CmoCh04G022810 vs. TrEMBL
Match: A0A061DSV9_THECC (Peptidyl-prolyl cis-trans isomerase OS=Theobroma cacao GN=TCM_004971 PE=3 SV=1) HSP 1 Score: 347.4 bits (890), Expect = 1.5e-92 Identity = 167/221 (75.57%), Postives = 188/221 (85.07%), Query Frame = 1
BLAST of CmoCh04G022810 vs. TrEMBL
Match: C6TJK9_SOYBN (Peptidyl-prolyl cis-trans isomerase OS=Glycine max GN=GLYMA_19G222600 PE=2 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 5.7e-92 Identity = 170/266 (63.91%), Postives = 204/266 (76.69%), Query Frame = 1
BLAST of CmoCh04G022810 vs. TrEMBL
Match: V4TWG4_9ROSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus clementina GN=CICLE_v10021681mg PE=3 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 7.5e-92 Identity = 162/201 (80.60%), Postives = 178/201 (88.56%), Query Frame = 1
BLAST of CmoCh04G022810 vs. TrEMBL
Match: A0A067HFT8_CITSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus sinensis GN=CISIN_1g024387mg PE=3 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 7.5e-92 Identity = 162/201 (80.60%), Postives = 178/201 (88.56%), Query Frame = 1
BLAST of CmoCh04G022810 vs. TAIR10
Match: AT3G62030.2 (AT3G62030.2 rotamase CYP 4) HSP 1 Score: 296.6 bits (758), Expect = 1.5e-80 Identity = 149/256 (58.20%), Postives = 182/256 (71.09%), Query Frame = 1
BLAST of CmoCh04G022810 vs. TAIR10
Match: AT5G13120.1 (AT5G13120.1 cyclophilin 20-2) HSP 1 Score: 260.4 bits (664), Expect = 1.2e-69 Identity = 124/196 (63.27%), Postives = 152/196 (77.55%), Query Frame = 1
BLAST of CmoCh04G022810 vs. TAIR10
Match: AT5G58710.1 (AT5G58710.1 rotamase CYP 7) HSP 1 Score: 225.7 bits (574), Expect = 3.3e-59 Identity = 113/181 (62.43%), Postives = 132/181 (72.93%), Query Frame = 1
BLAST of CmoCh04G022810 vs. TAIR10
Match: AT2G21130.1 (AT2G21130.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 223.4 bits (568), Expect = 1.7e-58 Identity = 107/170 (62.94%), Postives = 124/170 (72.94%), Query Frame = 1
BLAST of CmoCh04G022810 vs. TAIR10
Match: AT2G29960.1 (AT2G29960.1 cyclophilin 5) HSP 1 Score: 223.0 bits (567), Expect = 2.2e-58 Identity = 110/172 (63.95%), Postives = 127/172 (73.84%), Query Frame = 1
BLAST of CmoCh04G022810 vs. NCBI nr
Match: gi|659072569|ref|XP_008466218.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase A1 [Cucumis melo]) HSP 1 Score: 444.1 bits (1141), Expect = 1.7e-121 Identity = 216/260 (83.08%), Postives = 227/260 (87.31%), Query Frame = 1
BLAST of CmoCh04G022810 vs. NCBI nr
Match: gi|778698547|ref|XP_011654558.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase A1 [Cucumis sativus]) HSP 1 Score: 443.4 bits (1139), Expect = 2.9e-121 Identity = 217/260 (83.46%), Postives = 229/260 (88.08%), Query Frame = 1
BLAST of CmoCh04G022810 vs. NCBI nr
Match: gi|590720429|ref|XP_007051330.1| (Peptidyl-prolyl cis-trans isomerase [Theobroma cacao]) HSP 1 Score: 347.4 bits (890), Expect = 2.2e-92 Identity = 167/221 (75.57%), Postives = 188/221 (85.07%), Query Frame = 1
BLAST of CmoCh04G022810 vs. NCBI nr
Match: gi|359806424|ref|NP_001240987.1| (uncharacterized protein LOC100785805 [Glycine max]) HSP 1 Score: 345.5 bits (885), Expect = 8.2e-92 Identity = 170/266 (63.91%), Postives = 204/266 (76.69%), Query Frame = 1
BLAST of CmoCh04G022810 vs. NCBI nr
Match: gi|641868059|gb|KDO86743.1| (hypothetical protein CISIN_1g024387mg [Citrus sinensis]) HSP 1 Score: 345.1 bits (884), Expect = 1.1e-91 Identity = 162/201 (80.60%), Postives = 178/201 (88.56%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|