CmoCh04G021810 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G021810
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTwo-component response regulator
LocationCmo_Chr04 : 15984868 .. 15985818 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTGATATGGACAGTTTTTCATTCTTGCACGTGCTCCTTAAGATGAATATTGTTGTCATTTGTAAGCTCAATTTTGCTTTACTATCACATTCAATTAAATGTCTTCATTATTCTCAAGCTATTTAGTTGTCGAGCAGTTATGTCTTCAGCGATGAACTTGAAGGTTGCTACGAAAGCATTGGCAGAAGGGGCGTGTTATTTTCTTCCGAAACCTATTTTTAAGGATGATCTCAAATATCTATGGCAACACGTGTATCGTAGTAACATGAACATAGCCAAGCTAACCCATTAAACAAATTGCGTAGAAAAAGTCAAATCTGGAAAAGAATCCACTGATATCTAAAACGGCAACACTGTTGTTTTGTCTCGGTCCACCGATGCAGTTAGTTATAATAATAATTGTAGTATTAACTATCCAATTACGAGCTATAACGAAAAAGTGCGAAATACGCCAACTAATTCCCATGATACCCTAGTTGCTTCATACTCCCAAGGAAAGAGATCAACGGATGACATATAAGGAACAAACAAGGTGAAGAGAGTTACATATTACCCAAAACCTACCAATTTTGGACATACAAGAGCCGATGAAGATAATGGAAGAGGGAAGGAATATTATATTTCTAGTAATACTAGATCACGTCTTGTTTGGAATATGGAACGACGTCACAAGTTCTCTGACGCCCTCAACAAGCTGGGTGATAAATGTAATTTTACCTTTCCCACGAGTTATTTTTCTTTTTGTAGGATTTGAATTTGATGAAGCATTTCTAATTGTTGTTATTATGTTTTCTTTTAGTTTTGAAGGTCGCCCAATACTTATACTCAAGTTGATGAATGAACCATGCTTGACCCTGCGTCAGGTAGCTAACCACCGGGAGGTATTCTTCTATCAAGTTTGCTTACTATTTTCCCACTATGTATTTTTAGTTATTTATGAATAAATGA

mRNA sequence

ATGCCTGATATGGACAGTTTTTCATTCTTGCACGTGCTCCTTAAGATGAATATTGTTCTATTTAGTTGTCGAGCAGTTATGTCTTCAGCGATGAACTTGAAGGTTGCTACGAAAGCATTGGCAGAAGGGGCGTGTTATTTTCTTCCGAAACCTATTTTTAAGGATGATCTCAAATATCTATGGCAACACGTGTATCGTAGAACAAACAAGGTGAAGAGAGTTACATATTACCCAAAACCTACCAATTTTGGACATACAAGAGCCGATGAAGATAATGGAAGAGGGAAGGAATATTATATTTCTAGTAATACTAGATCACGTCTTGTTTGGAATATGGAACGACGTCACAAGTTCTCTGACGCCCTCAACAAGCTGGGTCGCCCAATACTTATACTCAAGTTGATGAATGAACCATGCTTGACCCTGCGTCAGGTAGCTAACCACCGGGAGTTATTTATGAATAAATGA

Coding sequence (CDS)

ATGCCTGATATGGACAGTTTTTCATTCTTGCACGTGCTCCTTAAGATGAATATTGTTCTATTTAGTTGTCGAGCAGTTATGTCTTCAGCGATGAACTTGAAGGTTGCTACGAAAGCATTGGCAGAAGGGGCGTGTTATTTTCTTCCGAAACCTATTTTTAAGGATGATCTCAAATATCTATGGCAACACGTGTATCGTAGAACAAACAAGGTGAAGAGAGTTACATATTACCCAAAACCTACCAATTTTGGACATACAAGAGCCGATGAAGATAATGGAAGAGGGAAGGAATATTATATTTCTAGTAATACTAGATCACGTCTTGTTTGGAATATGGAACGACGTCACAAGTTCTCTGACGCCCTCAACAAGCTGGGTCGCCCAATACTTATACTCAAGTTGATGAATGAACCATGCTTGACCCTGCGTCAGGTAGCTAACCACCGGGAGTTATTTATGAATAAATGA
Homology
[Close]
BLAST of CmoCh04G021810 vs. Swiss-Prot
Match: ARR11_ARATH (Two-component response regulator ARR11 OS=Arabidopsis thaliana GN=ARR11 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 59/184 (32.07%), Postives = 88/184 (47.83%), Query Frame = 1 

Query: 1   MPDMDSFSFL-HVLLKMNIVLFSCRAVMSSAMNLKVATKALAEGACYFLPKPIFKDDLKY 60
           MPDMD F  L HV L++++ +     +MS         K +  GAC +L KPI   +LK 
Sbjct: 66  MPDMDGFKLLEHVGLELDLPVI----MMSVDGETSRVMKGVQHGACDYLLKPIRMKELKI 125

Query: 61  LWQHVYRRTNKVKR-------------VTYYP--------KPTNFGHTRADEDNGR---- 120
           +WQHV R+  +  R             +T Y         +  +FG  R D D  +    
Sbjct: 126 IWQHVLRKKLQEVRDIEGCGYEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLLQ 185

Query: 121 -GKEYYISSNTRSRLVWNMERRHKFSDALNKLG-----RPILILKLMNEPCLTLRQVANH 153
              +   SS+ ++R+VW+ E  HKF +A+N++G      P  IL LMN P LT   VA+H
Sbjct: 186 DESDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASH 245

[Close]
BLAST of CmoCh04G021810 vs. Swiss-Prot
Match: ORR21_ORYSJ (Two-component response regulator ORR21 OS=Oryza sativa subsp. japonica GN=RR21 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.1e-11
Identity = 57/187 (30.48%), Postives = 87/187 (46.52%), Query Frame = 1 

Query: 1   MPDMDSFSFLHVL-LKMNIVLFSCRAVMSSAMNLKVATKALAEGACYFLPKPIFKDDLKY 60
           MPDMD F  L ++ L+M++ +     +MS+     +  K +  GAC +L KP+  ++LK 
Sbjct: 71  MPDMDGFRLLELVGLEMDLPVI----MMSADSRTDIVMKGIKHGACDYLIKPVRMEELKN 130

Query: 61  LWQHVYR-------------------RTNKVKRVTYYPKPTNFGHTRA----------DE 120
           +WQHV R                   RT        Y    N G   +          D+
Sbjct: 131 IWQHVIRKKFNENKEHEHSGSLDDTDRTRPTNNDNEYASSANDGAEGSWKSQKKKRDKDD 190

Query: 121 DNGRGKEYYISSNTRS-RLVWNMERRHKFSDALNKLG----RPILILKLMNEPCLTLRQV 153
           D+G  +    SS ++  R+VW++E   +F +A+N LG     P  IL+LMN P LT   V
Sbjct: 191 DDGELESGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENV 250

[Close]
BLAST of CmoCh04G021810 vs. Swiss-Prot
Match: ORR21_ORYSI (Two-component response regulator ORR21 OS=Oryza sativa subsp. indica GN=RR21 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.1e-11
Identity = 57/187 (30.48%), Postives = 87/187 (46.52%), Query Frame = 1 

Query: 1   MPDMDSFSFLHVL-LKMNIVLFSCRAVMSSAMNLKVATKALAEGACYFLPKPIFKDDLKY 60
           MPDMD F  L ++ L+M++ +     +MS+     +  K +  GAC +L KP+  ++LK 
Sbjct: 71  MPDMDGFRLLELVGLEMDLPVI----MMSADSRTDIVMKGIKHGACDYLIKPVRMEELKN 130

Query: 61  LWQHVYR-------------------RTNKVKRVTYYPKPTNFGHTRA----------DE 120
           +WQHV R                   RT        Y    N G   +          D+
Sbjct: 131 IWQHVIRKKFNENKEHEHSGSLDDTDRTRPTNNDNEYASSANDGAEGSWKSQKKKRDKDD 190

Query: 121 DNGRGKEYYISSNTRS-RLVWNMERRHKFSDALNKLG----RPILILKLMNEPCLTLRQV 153
           D+G  +    SS ++  R+VW++E   +F +A+N LG     P  IL+LMN P LT   V
Sbjct: 191 DDGELESGDPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENV 250

[Close]
BLAST of CmoCh04G021810 vs. Swiss-Prot
Match: ARR12_ARATH (Two-component response regulator ARR12 OS=Arabidopsis thaliana GN=ARR12 PE=2 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 2.1e-10
Identity = 58/183 (31.69%), Postives = 87/183 (47.54%), Query Frame = 1 

Query: 1   MPDMDSFSFLHVL-LKMNIVLFSCRAVMSSAMNLKVATKALAEGACYFLPKPIFKDDLKY 60
           MPDMD F  L ++ L+M++ +     ++S+  + K   K +  GAC +L KP+  ++LK 
Sbjct: 72  MPDMDGFKLLELVGLEMDLPVI----MLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKN 131

Query: 61  LWQHVYR---------RTNKVKRVTYYPKPTNFGHTRADEDNGRG----KEYY------- 120
           +WQHV R           N  KR        N G   +D++NG+G    K+ Y       
Sbjct: 132 IWQHVVRSRFDKNRGSNNNGDKR----DGSGNEGVGNSDQNNGKGNRKRKDQYNEDEDED 191

Query: 121 ------ISSNTRSRLVWNMERRHKFSDALNKLG----RPILILKLMNEPCLTLRQVANHR 153
                   +  + R+VW +E   KF  A+N+LG     P  IL LMN   LT   VA+H 
Sbjct: 192 RDDNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHL 246

[Close]
BLAST of CmoCh04G021810 vs. Swiss-Prot
Match: ARR10_ARATH (Two-component response regulator ARR10 OS=Arabidopsis thaliana GN=ARR10 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 7.8e-10
Identity = 52/171 (30.41%), Postives = 83/171 (48.54%), Query Frame = 1 

Query: 1   MPDMDSFSFLHVL-LKMNIVLFSCRAVMSSAMNLKVATKALAEGACYFLPKPIFKDDLKY 60
           MPDMD F  L ++ L+M++ +     ++S+  + K   K +  GAC +L KP+  ++LK 
Sbjct: 72  MPDMDGFKLLELVGLEMDLPVI----MLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKN 131

Query: 61  LWQHVYRRTNKVKRVTYYPKPTNFGHTRADEDNGRGKEYY--------------ISSNTR 120
           +WQHV R++   K         + G    D+ N + KE Y               ++  +
Sbjct: 132 IWQHVVRKSKLKKN----KSNVSNGSGNCDKANRKRKEQYEEEEEEERGNDNDDPTAQKK 191

Query: 121 SRLVWNMERRHKFSDALNKLG----RPILILKLMNEPCLTLRQVANHRELF 153
            R++W  E  +KF  A++ LG     P  IL LMN   LT   VA+H + F
Sbjct: 192 PRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKF 234

[Close]
BLAST of CmoCh04G021810 vs. TrEMBL
Match: A0A0A0KPK0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G576720 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-23
Identity = 57/87 (65.52%), Postives = 71/87 (81.61%), Query Frame = 1 

Query: 69  NKVKRVTYYPKPTNFGHTRADEDNGRGKEYYISSNTRSRLVWNMERRHKFSDALNKLG-- 128
           ++ KRV YY +PT FG +R DED+ R KEYYI+S++R+R+VWN ERR KF+DALNKLG  
Sbjct: 182 SREKRVKYYSEPTKFGFSRIDEDHERRKEYYIASDSRTRVVWNAERRRKFTDALNKLGDK 241

Query: 129 -RPILILKLMNEPCLTLRQVANHRELF 153
            RP LILK+MNEPCLTLRQVANH + +
Sbjct: 242 SRPKLILKMMNEPCLTLRQVANHLQKY 268

[Close]
BLAST of CmoCh04G021810 vs. TrEMBL
Match: A0A067KJ09_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09301 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 4.2e-18
Identity = 62/170 (36.47%), Postives = 95/170 (55.88%), Query Frame = 1 

Query: 1   MPDMDSFSFLHVLLKMNIVLFSCRAVMSSAMNLKVATKALAEGACYFLPKPIFKDDLKYL 60
           +PDMD+ +FLHVL + NI +     +MSS  ++ V  K++AEGA ++L KPIF DDLKY+
Sbjct: 74  LPDMDTIAFLHVLNEYNIPVI----LMSSERSISVVIKSIAEGATFYLQKPIFFDDLKYV 133

Query: 61  WQHVYRRT-----------NKVKRVTYYPKPTNFGHTRADEDNGRGKEYYISSNTRSRLV 120
           WQH YR+            +  K         N      +++N   K    S+  +SR++
Sbjct: 134 WQHAYRKKKTPTDSQQDQGDAQKSTDKQIMEENKKIATEEKENKENKNNNNSTEKKSRIL 193

Query: 121 WNMERRHKFSDALNKLG----RPILILKLMNEPCLTLRQVANHRELFMNK 156
           W  E   KF+ A+++LG    RP  IL++M  P LT RQVA+H + + ++
Sbjct: 194 WTPELHMKFTAAISELGDKKARPKPILEIMKVPNLTQRQVASHLQKYKSQ 239

[Close]
BLAST of CmoCh04G021810 vs. TrEMBL
Match: M5XWH8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023099mg PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.0e-12
Identity = 48/85 (56.47%), Postives = 56/85 (65.88%), Query Frame = 1 

Query: 1   MPDMDSFSFLHVLLKMNI-VLFSCRAVMSSAMNLKVATKALAEGACYFLPKPIFKDDLKY 60
           MPDMDS SFL VL K  I V+F     MSS MN+ VA KALAEGAC+FL KPI  +DLK 
Sbjct: 74  MPDMDSLSFLRVLHKKEIPVIF-----MSSEMNVNVAKKALAEGACFFLEKPISLEDLKS 133

Query: 61  LWQHVYRRTNKVKRVTYYPKPTNFG 85
           +WQHVYR   K++    Y    N+G
Sbjct: 134 VWQHVYR---KIRTPMKYKHKPNYG 150

[Close]
BLAST of CmoCh04G021810 vs. TrEMBL
Match: A0A0H2UJ25_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.9e-11
Identity = 52/157 (33.12%), Postives = 84/157 (53.50%), Query Frame = 1 

Query: 1   MPDMDSFSFL-HVLLKMNIVLFSCRAVMSSAMNLKVATKALAEGACYFLPKPIFKDDLKY 60
           MPDMD F  L H+ L+M++ +     +MS         K +  GAC +L KP+   +L+ 
Sbjct: 66  MPDMDGFKLLEHIGLEMDLPVI----MMSIDGETSRVMKGVQHGACDYLLKPVRMKELRN 125

Query: 61  LWQHVYRRTNKVKRVTYYPKPTNFGHTRADEDNGRGKEYYISSNTRSRLVWNMERRHKFS 120
           +WQHVYR+  K+  V      ++    R D D+G       ++  ++R+VW+++   KF 
Sbjct: 126 IWQHVYRK--KMHEVKEIEVDSDATRKRKDVDHGDQDSSDGATAKKARVVWSVDLHQKFV 185

Query: 121 DALNKLG----RPILILKLMNEPCLTLRQVANHRELF 153
           +A+N++G     P  IL LMN P LT   VA+H + +
Sbjct: 186 NAVNQIGFDKVGPKKILDLMNVPGLTRENVASHLQKY 216

[Close]
BLAST of CmoCh04G021810 vs. TrEMBL
Match: W5HYP1_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.4e-11
Identity = 55/181 (30.39%), Postives = 97/181 (53.59%), Query Frame = 1 

Query: 1   MPDMDSFSFLHVL-LKMNIVLFSCRAVMSSAMNLKVATKALAEGACYFLPKPIFKDDLKY 60
           MPDMD F  L ++ L+M++ +     ++S   N K   K +  GAC +L KP+  ++LK 
Sbjct: 79  MPDMDGFKLLELIGLEMDLPVI----MLSVDCNKKAVMKGINHGACDYLMKPVHTNELKN 138

Query: 61  LWQHVYRRTNKVKRVTYYPKPTNFGH--------------TRADEDNG--RGKEYYISSN 120
           +WQHV  R  + + +++  +  +  H              T+++E +G    KE   +S 
Sbjct: 139 IWQHVESR-RRSQAISHMSRDNDNNHRVHPGTLARNKDSKTKSNEKDGSNENKESTRAST 198

Query: 121 TR--SRLVWNMERRHKFSDALNKLG----RPILILKLMNEPCLTLRQVANHRE---LFMN 156
           T+  +R+ W +E  +KF +A+N++G     P  IL+LMN  CLT   +A+H +   L++N
Sbjct: 199 TQKNTRVKWTIELHNKFLEAINQIGLDKAAPNKILELMNVDCLTRHNIASHLQKYRLYLN 254

[Close]
BLAST of CmoCh04G021810 vs. TAIR10
Match: AT1G67710.1 (AT1G67710.1 response regulator 11)

HSP 1 Score: 70.9 bits (172), Expect = 8.0e-13
Identity = 59/184 (32.07%), Postives = 88/184 (47.83%), Query Frame = 1 

Query: 1   MPDMDSFSFL-HVLLKMNIVLFSCRAVMSSAMNLKVATKALAEGACYFLPKPIFKDDLKY 60
           MPDMD F  L HV L++++ +     +MS         K +  GAC +L KPI   +LK 
Sbjct: 66  MPDMDGFKLLEHVGLELDLPVI----MMSVDGETSRVMKGVQHGACDYLLKPIRMKELKI 125

Query: 61  LWQHVYRRTNKVKR-------------VTYYP--------KPTNFGHTRADEDNGR---- 120
           +WQHV R+  +  R             +T Y         +  +FG  R D D  +    
Sbjct: 126 IWQHVLRKKLQEVRDIEGCGYEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLLQ 185

Query: 121 -GKEYYISSNTRSRLVWNMERRHKFSDALNKLG-----RPILILKLMNEPCLTLRQVANH 153
              +   SS+ ++R+VW+ E  HKF +A+N++G      P  IL LMN P LT   VA+H
Sbjct: 186 DESDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASH 245

[Close]
BLAST of CmoCh04G021810 vs. TAIR10
Match: AT2G25180.1 (AT2G25180.1 response regulator 12)

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11
Identity = 58/183 (31.69%), Postives = 87/183 (47.54%), Query Frame = 1 

Query: 1   MPDMDSFSFLHVL-LKMNIVLFSCRAVMSSAMNLKVATKALAEGACYFLPKPIFKDDLKY 60
           MPDMD F  L ++ L+M++ +     ++S+  + K   K +  GAC +L KP+  ++LK 
Sbjct: 72  MPDMDGFKLLELVGLEMDLPVI----MLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKN 131

Query: 61  LWQHVYR---------RTNKVKRVTYYPKPTNFGHTRADEDNGRG----KEYY------- 120
           +WQHV R           N  KR        N G   +D++NG+G    K+ Y       
Sbjct: 132 IWQHVVRSRFDKNRGSNNNGDKR----DGSGNEGVGNSDQNNGKGNRKRKDQYNEDEDED 191

Query: 121 ------ISSNTRSRLVWNMERRHKFSDALNKLG----RPILILKLMNEPCLTLRQVANHR 153
                   +  + R+VW +E   KF  A+N+LG     P  IL LMN   LT   VA+H 
Sbjct: 192 RDDNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHL 246

[Close]
BLAST of CmoCh04G021810 vs. TAIR10
Match: AT4G31920.1 (AT4G31920.1 response regulator 10)

HSP 1 Score: 65.1 bits (157), Expect = 4.4e-11
Identity = 52/171 (30.41%), Postives = 83/171 (48.54%), Query Frame = 1 

Query: 1   MPDMDSFSFLHVL-LKMNIVLFSCRAVMSSAMNLKVATKALAEGACYFLPKPIFKDDLKY 60
           MPDMD F  L ++ L+M++ +     ++S+  + K   K +  GAC +L KP+  ++LK 
Sbjct: 72  MPDMDGFKLLELVGLEMDLPVI----MLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKN 131

Query: 61  LWQHVYRRTNKVKRVTYYPKPTNFGHTRADEDNGRGKEYY--------------ISSNTR 120
           +WQHV R++   K         + G    D+ N + KE Y               ++  +
Sbjct: 132 IWQHVVRKSKLKKN----KSNVSNGSGNCDKANRKRKEQYEEEEEEERGNDNDDPTAQKK 191

Query: 121 SRLVWNMERRHKFSDALNKLG----RPILILKLMNEPCLTLRQVANHRELF 153
            R++W  E  +KF  A++ LG     P  IL LMN   LT   VA+H + F
Sbjct: 192 PRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKF 234

[Close]
BLAST of CmoCh04G021810 vs. TAIR10
Match: AT3G16857.2 (AT3G16857.2 response regulator 1)

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-08
Identity = 53/201 (26.37%), Postives = 84/201 (41.79%), Query Frame = 1 

Query: 1   MPDMDSFSFL-HVLLKMNIVLFSCRAVMSSAMNLKVATKALAEGACYFLPKPIFKDDLKY 60
           MPDMD F  L HV L+M++ +     +MS+  +  V  K +  GA  +L KP+  + LK 
Sbjct: 92  MPDMDGFKLLEHVGLEMDLPVI----MMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKN 151

Query: 61  LWQHVYRR--------------------------------------------TNKVKRVT 120
           +WQHV R+                                            ++ V    
Sbjct: 152 IWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGN 211

Query: 121 YYPKPTNFGHTRADEDNGRGKEYYISSNTRSRLVWNMERRHKFSDALNKLGR----PILI 153
            +   +        E+ G  K+   S+  + R+VW++E   +F  A+N+LG     P  I
Sbjct: 212 NWRSSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKI 271

[Close]
BLAST of CmoCh04G021810 vs. TAIR10
Match: AT3G62670.1 (AT3G62670.1 response regulator 20)

HSP 1 Score: 53.9 bits (128), Expect = 1.0e-07
Identity = 50/181 (27.62%), Postives = 78/181 (43.09%), Query Frame = 1 

Query: 1   MPDMDSFSFLHVLLK-MNIVLFSCRAVMSSAMNLKVATKALAEGACYFLPKPIFKDDLKY 60
           MPD++    L+++ K M++ +     +MS     +   +++  GAC FL KP+ K+ +  
Sbjct: 20  MPDINGLDALNIIGKQMDLPV----VIMSHEYKKETVMESIKYGACDFLVKPVSKEVIAV 79

Query: 61  LWQHVYRRTNKVKRVTYYPKPTNFGHTRAD-------------EDNGRGKEYYI------ 120
           LW+HVYR+      +    KP   G   +D             E N  G +         
Sbjct: 80  LWRHVYRKRMSKSGL---DKPGESGTVESDPDEYDDLEQDNLYESNEEGSKNTCDHKEEK 139

Query: 121 SSNTRSRLVWNMERRHKFSDALNKLGR-----PILILKLMNEPC----LTLRQVANHREL 153
           S   + R+ W  E  HKF  A+ K+G      P  ILK M E      LT   VA+H + 
Sbjct: 140 SPTKKPRMQWTPELHHKFEVAVEKMGSLEKAFPKTILKYMQEELNVQGLTRNNVASHLQK 193

[Close]
BLAST of CmoCh04G021810 vs. NCBI nr
Match: gi|778704113|ref|XP_011655477.1| (PREDICTED: uncharacterized protein LOC101203501 isoform X2 [Cucumis sativus])

HSP 1 Score: 120.6 bits (301), Expect = 2.5e-24
Identity = 56/84 (66.67%), Postives = 70/84 (83.33%), Query Frame = 1 

Query: 69  NKVKRVTYYPKPTNFGHTRADEDNGRGKEYYISSNTRSRLVWNMERRHKFSDALNKLGRP 128
           ++ KRV YY +PT FG +R DED+ R KEYYI+S++R+R+VWN ERR KF+DALNKL RP
Sbjct: 266 SREKRVKYYSEPTKFGFSRIDEDHERRKEYYIASDSRTRVVWNAERRRKFTDALNKLARP 325

Query: 129 ILILKLMNEPCLTLRQVANHRELF 153
            LILK+MNEPCLTLRQVANH + +
Sbjct: 326 KLILKMMNEPCLTLRQVANHLQKY 349

[Close]
BLAST of CmoCh04G021810 vs. NCBI nr
Match: gi|778704123|ref|XP_011655481.1| (PREDICTED: uncharacterized protein LOC101203501 isoform X5 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 2.1e-23
Identity = 57/87 (65.52%), Postives = 71/87 (81.61%), Query Frame = 1 

Query: 69  NKVKRVTYYPKPTNFGHTRADEDNGRGKEYYISSNTRSRLVWNMERRHKFSDALNKLG-- 128
           ++ KRV YY +PT FG +R DED+ R KEYYI+S++R+R+VWN ERR KF+DALNKLG  
Sbjct: 182 SREKRVKYYSEPTKFGFSRIDEDHERRKEYYIASDSRTRVVWNAERRRKFTDALNKLGDK 241

Query: 129 -RPILILKLMNEPCLTLRQVANHRELF 153
            RP LILK+MNEPCLTLRQVANH + +
Sbjct: 242 SRPKLILKMMNEPCLTLRQVANHLQKY 268

[Close]
BLAST of CmoCh04G021810 vs. NCBI nr
Match: gi|659072936|ref|XP_008467175.1| (PREDICTED: uncharacterized protein LOC103504590 isoform X2 [Cucumis melo])

HSP 1 Score: 117.5 bits (293), Expect = 2.1e-23
Identity = 56/84 (66.67%), Postives = 68/84 (80.95%), Query Frame = 1 

Query: 69  NKVKRVTYYPKPTNFGHTRADEDNGRGKEYYISSNTRSRLVWNMERRHKFSDALNKLGRP 128
           N  KRV YY +PT FG +R DED+ R KE YI+S++R+R+VWN ERR KF+DALNKL RP
Sbjct: 266 NLEKRVKYYSEPTKFGFSRIDEDHERRKECYIASDSRTRVVWNAERRRKFTDALNKLARP 325

Query: 129 ILILKLMNEPCLTLRQVANHRELF 153
            LILK+MNEPCLTLRQVANH + +
Sbjct: 326 KLILKMMNEPCLTLRQVANHLQKY 349

[Close]
BLAST of CmoCh04G021810 vs. NCBI nr
Match: gi|778704127|ref|XP_011655482.1| (PREDICTED: uncharacterized protein LOC101203501 isoform X6 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 2.1e-23
Identity = 57/87 (65.52%), Postives = 71/87 (81.61%), Query Frame = 1 

Query: 69  NKVKRVTYYPKPTNFGHTRADEDNGRGKEYYISSNTRSRLVWNMERRHKFSDALNKLG-- 128
           ++ KRV YY +PT FG +R DED+ R KEYYI+S++R+R+VWN ERR KF+DALNKLG  
Sbjct: 157 SREKRVKYYSEPTKFGFSRIDEDHERRKEYYIASDSRTRVVWNAERRRKFTDALNKLGDK 216

Query: 129 -RPILILKLMNEPCLTLRQVANHRELF 153
            RP LILK+MNEPCLTLRQVANH + +
Sbjct: 217 SRPKLILKMMNEPCLTLRQVANHLQKY 243

[Close]
BLAST of CmoCh04G021810 vs. NCBI nr
Match: gi|778704119|ref|XP_011655480.1| (PREDICTED: uncharacterized protein LOC101203501 isoform X4 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 2.1e-23
Identity = 57/87 (65.52%), Postives = 71/87 (81.61%), Query Frame = 1 

Query: 69  NKVKRVTYYPKPTNFGHTRADEDNGRGKEYYISSNTRSRLVWNMERRHKFSDALNKLG-- 128
           ++ KRV YY +PT FG +R DED+ R KEYYI+S++R+R+VWN ERR KF+DALNKLG  
Sbjct: 215 SREKRVKYYSEPTKFGFSRIDEDHERRKEYYIASDSRTRVVWNAERRRKFTDALNKLGDK 274

Query: 129 -RPILILKLMNEPCLTLRQVANHRELF 153
            RP LILK+MNEPCLTLRQVANH + +
Sbjct: 275 SRPKLILKMMNEPCLTLRQVANHLQKY 301

The following BLAST results are available for this feature:
BLAST of CmoCh04G021810 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ARR11_ARATH1.4e-1132.07Two-component response regulator ARR11 OS=Arabidopsis thaliana GN=ARR11 PE=1 SV=... [more]
ORR21_ORYSJ7.1e-1130.48Two-component response regulator ORR21 OS=Oryza sativa subsp. japonica GN=RR21 P... [more]
ORR21_ORYSI7.1e-1130.48Two-component response regulator ORR21 OS=Oryza sativa subsp. indica GN=RR21 PE=... [more]
ARR12_ARATH2.1e-1031.69Two-component response regulator ARR12 OS=Arabidopsis thaliana GN=ARR12 PE=2 SV=... [more]
ARR10_ARATH7.8e-1030.41Two-component response regulator ARR10 OS=Arabidopsis thaliana GN=ARR10 PE=1 SV=... [more]
BLAST of CmoCh04G021810 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPK0_CUCSA1.5e-2365.52Uncharacterized protein OS=Cucumis sativus GN=Csa_5G576720 PE=4 SV=1[more]
A0A067KJ09_JATCU4.2e-1836.47Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09301 PE=4 SV=1[more]
M5XWH8_PRUPE2.0e-1256.47Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023099mg PE=4 SV=1[more]
A0A0H2UJ25_WHEAT4.9e-1133.12Uncharacterized protein OS=Triticum aestivum PE=4 SV=1[more]
W5HYP1_WHEAT6.4e-1130.39Uncharacterized protein OS=Triticum aestivum PE=4 SV=1[more]
BLAST of CmoCh04G021810 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67710.18.0e-1332.07 response regulator 11[more]
AT2G25180.11.2e-1131.69 response regulator 12[more]
AT4G31920.14.4e-1130.41 response regulator 10[more]
AT3G16857.21.2e-0826.37 response regulator 1[more]
AT3G62670.11.0e-0727.62 response regulator 20[more]
BLAST of CmoCh04G021810 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778704113|ref|XP_011655477.1|2.5e-2466.67PREDICTED: uncharacterized protein LOC101203501 isoform X2 [Cucumis sativus][more]
gi|778704123|ref|XP_011655481.1|2.1e-2365.52PREDICTED: uncharacterized protein LOC101203501 isoform X5 [Cucumis sativus][more]
gi|659072936|ref|XP_008467175.1|2.1e-2366.67PREDICTED: uncharacterized protein LOC103504590 isoform X2 [Cucumis melo][more]
gi|778704127|ref|XP_011655482.1|2.1e-2365.52PREDICTED: uncharacterized protein LOC101203501 isoform X6 [Cucumis sativus][more]
gi|778704119|ref|XP_011655480.1|2.1e-2365.52PREDICTED: uncharacterized protein LOC101203501 isoform X4 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001789Sig_transdc_resp-reg_receiver
IPR009057Homeobox-like_sf
IPR011006CheY-like_superfamily
Vocabulary: Biological Process
TermDefinition
GO:0000160phosphorelay signal transduction system
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000160 phosphorelay signal transduction system
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G021810.1CmoCh04G021810.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001789Signal transduction response regulator, receiver domainPROFILEPS50110RESPONSE_REGULATORYcoord: 1..65
score: 12
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 103..148
score: 6.
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 104..152
score: 3.9
IPR011006CheY-like superfamilyunknownSSF52172CheY-likecoord: 1..86
score: 5.1
NoneNo IPR availableGENE3DG3DSA:3.40.50.2300coord: 1..85
score: 2.
NoneNo IPR availablePANTHERPTHR31442FAMILY NOT NAMEDcoord: 1..148
score: 1.1
NoneNo IPR availablePANTHERPTHR31442:SF9SUBFAMILY NOT NAMEDcoord: 1..148
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G021810Melon (DHL92) v3.6.1cmomedB716
CmoCh04G021810Melon (DHL92) v3.6.1cmomedB744
CmoCh04G021810Silver-seed gourdcarcmoB1072
CmoCh04G021810Silver-seed gourdcarcmoB1137
CmoCh04G021810Silver-seed gourdcarcmoB1413
CmoCh04G021810Cucumber (Chinese Long) v3cmocucB0858
CmoCh04G021810Cucumber (Chinese Long) v3cmocucB0878
CmoCh04G021810Watermelon (97103) v2cmowmbB676
CmoCh04G021810Watermelon (97103) v2cmowmbB740
CmoCh04G021810Wax gourdcmowgoB0824
CmoCh04G021810Wax gourdcmowgoB0909
CmoCh04G021810Cucurbita moschata (Rifu)cmocmoB344
CmoCh04G021810Cucurbita moschata (Rifu)cmocmoB254
CmoCh04G021810Cucurbita moschata (Rifu)cmocmoB469
CmoCh04G021810Cucumber (Gy14) v1cgycmoB0777
CmoCh04G021810Cucumber (Gy14) v1cgycmoB0800
CmoCh04G021810Cucurbita maxima (Rimu)cmacmoB301
CmoCh04G021810Cucurbita maxima (Rimu)cmacmoB426
CmoCh04G021810Cucurbita maxima (Rimu)cmacmoB729
CmoCh04G021810Cucurbita maxima (Rimu)cmacmoB742
CmoCh04G021810Wild cucumber (PI 183967)cmocpiB733
CmoCh04G021810Wild cucumber (PI 183967)cmocpiB750
CmoCh04G021810Cucumber (Chinese Long) v2cmocuB724
CmoCh04G021810Cucumber (Chinese Long) v2cmocuB742
CmoCh04G021810Melon (DHL92) v3.5.1cmomeB627
CmoCh04G021810Melon (DHL92) v3.5.1cmomeB654
CmoCh04G021810Watermelon (Charleston Gray)cmowcgB636
CmoCh04G021810Watermelon (Charleston Gray)cmowcgB666
CmoCh04G021810Watermelon (97103) v1cmowmB705
CmoCh04G021810Watermelon (97103) v1cmowmB706
CmoCh04G021810Cucurbita pepo (Zucchini)cmocpeB650
CmoCh04G021810Cucurbita pepo (Zucchini)cmocpeB663
CmoCh04G021810Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G021810Cucurbita pepo (Zucchini)cmocpeB691
CmoCh04G021810Bottle gourd (USVL1VR-Ls)cmolsiB610
CmoCh04G021810Bottle gourd (USVL1VR-Ls)cmolsiB677
CmoCh04G021810Cucumber (Gy14) v2cgybcmoB637
CmoCh04G021810Cucumber (Gy14) v2cgybcmoB655