CmoCh04G021410 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G021410
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
LocationCmo_Chr04 : 14697857 .. 14698123 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGACTCAAACCCCTCCGATCATGGCTACTTTCACTGCCACTTTCATGTTCCTCCTCGCCCTAACCAACACTCAAAACGCCCCCCGTGACTACCTTGCGCTTCACAACCGCGCTAGAGACCAGGTTGGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCTGCGTACTCTCAAGCCTATGTAGAAAAAAGAAAGGGTGACTGTGCCATGATTCACTCAACTGGGCCGTACGGGGAAAACATAGCCGCGGGCTACTACCCTTAG

mRNA sequence

ATGTGGACTCAAACCCCTCCGATCATGGCTACTTTCACTGCCACTTTCATGTTCCTCCTCGCCCTAACCAACACTCAAAACGCCCCCCGTGACTACCTTGCGCTTCACAACCGCGCTAGAGACCAGGTTGGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCTGCGTACTCTCAAGCCTATGTAGAAAAAAGAAAGGGTGACTGTGCCATGATTCACTCAACTGGGCCGTACGGGGAAAACATAGCCGCGGGCTACTACCCTTAG

Coding sequence (CDS)

ATGTGGACTCAAACCCCTCCGATCATGGCTACTTTCACTGCCACTTTCATGTTCCTCCTCGCCCTAACCAACACTCAAAACGCCCCCCGTGACTACCTTGCGCTTCACAACCGCGCTAGAGACCAGGTTGGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCTGCGTACTCTCAAGCCTATGTAGAAAAAAGAAAGGGTGACTGTGCCATGATTCACTCAACTGGGCCGTACGGGGAAAACATAGCCGCGGGCTACTACCCTTAG
Homology
[Close]
BLAST of CmoCh04G021410 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.8e-19
Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = 1 

Query: 8  IMATFTATFMFLLALTNTQNAPRDYLALHNRARDQVGVGPMQWSNTVAAYSQAYVEKRKG 67
          I+A F  TF  L+  +  QN+P+DYL  HN AR QVGVGPM W N +AAY+Q Y  +R G
Sbjct: 7  IVACFI-TFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIG 66

Query: 68 DCAMIHSTGPYGENIAAGY 87
          DC MIHS GPYGEN+AA +
Sbjct: 67 DCGMIHSHGPYGENLAAAF 84

[Close]
BLAST of CmoCh04G021410 vs. Swiss-Prot
Match: PR1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.9e-17
Identity = 39/77 (50.65%), Postives = 55/77 (71.43%), Query Frame = 1 

Query: 9  MATFTATFMFLLALTNTQNAPRDYLALHNRARDQVGVGPMQWSNTVAAYSQAYVEKRKGD 68
          +  F A    L+  +  Q++P+DYL +HN+AR  VGVGPMQW   VAAY+++Y E+ +G+
Sbjct: 10 LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 69 CAMIHSTGPYGENIAAG 86
          C +IHS GPYGEN+A G
Sbjct: 70 CRLIHSGGPYGENLAWG 86

[Close]
BLAST of CmoCh04G021410 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 4.6e-15
Identity = 35/76 (46.05%), Postives = 50/76 (65.79%), Query Frame = 1 

Query: 8  IMATFTATFMFLLALTNTQNAPRDYLALHNRARDQVGVGPMQWSNTVAAYSQAYVEKRKG 67
          I+    A    L+     Q++ +DY+  HN+AR Q+GVGPMQW   +AAY++ Y  + KG
Sbjct: 9  ILIILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKG 68

Query: 68 DCAMIHSTGPYGENIA 84
          DC ++HS GPYGEN+A
Sbjct: 69 DCRLVHSRGPYGENLA 84

[Close]
BLAST of CmoCh04G021410 vs. Swiss-Prot
Match: PR1A_SOLLC (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.3e-14
Identity = 38/77 (49.35%), Postives = 52/77 (67.53%), Query Frame = 1 

Query: 12 FTATFM-FLLALTNTQNAPRD-YLALHNRARDQVGVGPMQWSNTVAAYSQAYVEKRKGDC 71
          F A F+ F++  ++    PR+ +L  HN AR +VGVGPM W + +AAY+Q Y  +R  DC
Sbjct: 6  FVACFITFIIFHSSQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDC 65

Query: 72 AMIHSTGPYGENIAAGY 87
           MIHS GPYGEN+AA +
Sbjct: 66 GMIHSDGPYGENLAAAF 82

[Close]
BLAST of CmoCh04G021410 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-13
Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 1 

Query: 1  MWTQTPPIMATFTAT-FMFLLALTNTQNAPRDYLALHNRARDQVGVGPMQWSNTVAAYSQ 60
          +++Q P      T   F+ +   ++ QN+ +DYL  HN AR  VGV P+ W N VAAY+Q
Sbjct: 5  LFSQMPSFFLVSTLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQ 64

Query: 61 AYVEKRKGDCAMIHSTGPYGENIAAG 86
           YV +   DC ++HS G YGEN+A G
Sbjct: 65 NYVSQLAADCNLVHSHGQYGENLAQG 90

[Close]
BLAST of CmoCh04G021410 vs. TrEMBL
Match: A0A0A0LLX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381130 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 9.0e-26
Identity = 55/80 (68.75%), Postives = 64/80 (80.00%), Query Frame = 1 

Query: 9  MATFTATFMFLLALTNTQNAPRDYLALHNRARDQVGVGPMQWSNTVAAYSQAYVEKRKGD 68
          MA F   F F   LT+ QNAP+DY++LHN+AR  VGVGPM W+NTVAAY+Q+Y  KRK D
Sbjct: 1  MAIFFPIFTFFFFLTHAQNAPQDYISLHNKARAAVGVGPMTWNNTVAAYAQSYANKRKND 60

Query: 69 CAMIHSTGPYGENIAAGYYP 89
          CA+IHSTGPYGENIA GYYP
Sbjct: 61 CALIHSTGPYGENIAVGYYP 80

[Close]
BLAST of CmoCh04G021410 vs. TrEMBL
Match: A0A0A0KHP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.7e-24
Identity = 50/72 (69.44%), Postives = 61/72 (84.72%), Query Frame = 1 

Query: 17 MFLLALTNTQNAPRDYLALHNRARDQVGVGPMQWSNTVAAYSQAYVEKRKGDCAMIHSTG 76
          MFL  LT+ QN+P+DY++LHN+AR  VGVGPM W NTVAAY+Q+Y  KRK DCA++HSTG
Sbjct: 1  MFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTG 60

Query: 77 PYGENIAAGYYP 89
          PYGENIA G+YP
Sbjct: 61 PYGENIAIGFYP 72

[Close]
BLAST of CmoCh04G021410 vs. TrEMBL
Match: A0A0A0LSG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 4.9e-24
Identity = 52/80 (65.00%), Postives = 62/80 (77.50%), Query Frame = 1 

Query: 9  MATFTATFMFLLALTNTQNAPRDYLALHNRARDQVGVGPMQWSNTVAAYSQAYVEKRKGD 68
          MA F  TF FL  LT  Q +P+DY++LHN+AR  V VGPM W+ TVAAY+Q+Y  KRK D
Sbjct: 1  MAIFFPTFTFLFFLTQAQKSPQDYISLHNKARAAVRVGPMTWNKTVAAYAQSYANKRKND 60

Query: 69 CAMIHSTGPYGENIAAGYYP 89
          CA++HSTGPYGENIA GYYP
Sbjct: 61 CALVHSTGPYGENIAVGYYP 80

[Close]
BLAST of CmoCh04G021410 vs. TrEMBL
Match: D7MGG3_ARALL (Putative uncharacterized protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_491308 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.4e-17
Identity = 40/68 (58.82%), Postives = 54/68 (79.41%), Query Frame = 1 

Query: 16 FMFLLALTNTQNAPRDYLALHNRARDQVGVGPMQWSNTVAAYSQAYVEKRKGDCAMIHST 75
          F+ L+     Q++P+D+LA HNRAR +VGVGP++W   VAAY+++Y  +RKGDCAM HS+
Sbjct: 17 FLVLIVHLKAQDSPQDFLAAHNRARAEVGVGPLRWDEKVAAYARSYANQRKGDCAMKHSS 76

Query: 76 GPYGENIA 84
          GPYGENIA
Sbjct: 77 GPYGENIA 84

[Close]
BLAST of CmoCh04G021410 vs. TrEMBL
Match: A0A151S107_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_029844 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 4.5e-17
Identity = 39/63 (61.90%), Postives = 51/63 (80.95%), Query Frame = 1 

Query: 21 ALTNTQNAPRDYLALHNRARDQVGVGPMQWSNTVAAYSQAYVEKRKGDCAMIHSTGPYGE 80
          ++ N QN+P+DYL  HN+AR +VGVGPM+W  TVA+Y+Q YV K KG+C M+HS GPYGE
Sbjct: 17 SVCNAQNSPQDYLNAHNKARSEVGVGPMRWDATVASYAQNYVNKLKGNCKMVHSGGPYGE 76

Query: 81 NIA 84
          N+A
Sbjct: 77 NLA 79

[Close]
BLAST of CmoCh04G021410 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 92.0 bits (227), Expect = 1.9e-19
Identity = 39/68 (57.35%), Postives = 53/68 (77.94%), Query Frame = 1 

Query: 16 FMFLLALTNTQNAPRDYLALHNRARDQVGVGPMQWSNTVAAYSQAYVEKRKGDCAMIHST 75
          F+ L+     Q++P+D+LA+HNRAR +VGVGP++W   VAAY++ Y  +RKGDCAM HS+
Sbjct: 17 FLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSS 76

Query: 76 GPYGENIA 84
          G YGENIA
Sbjct: 77 GSYGENIA 84

[Close]
BLAST of CmoCh04G021410 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 89.0 bits (219), Expect = 1.6e-18
Identity = 39/77 (50.65%), Postives = 55/77 (71.43%), Query Frame = 1 

Query: 9  MATFTATFMFLLALTNTQNAPRDYLALHNRARDQVGVGPMQWSNTVAAYSQAYVEKRKGD 68
          +  F A    L+  +  Q++P+DYL +HN+AR  VGVGPMQW   VAAY+++Y E+ +G+
Sbjct: 10 LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 69 CAMIHSTGPYGENIAAG 86
          C +IHS GPYGEN+A G
Sbjct: 70 CRLIHSGGPYGENLAWG 86

[Close]
BLAST of CmoCh04G021410 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 85.1 bits (209), Expect = 2.3e-17
Identity = 42/83 (50.60%), Postives = 51/83 (61.45%), Query Frame = 1 

Query: 9  MATFTATFM------FLLALTNTQNAPRDYLALHNRARDQVGVGPMQWSNTVAAYSQAYV 68
          M TF   F+      FL+  TN QN P+DYL  HN AR QVGV  + W  T+AAY+  Y 
Sbjct: 1  MNTFKTPFLVIVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYS 60

Query: 69 EKRKGDCAMIHSTGPYGENIAAG 86
            RK DC ++HS GPYGEN+A G
Sbjct: 61 NFRKADCNLVHSNGPYGENLAKG 83

[Close]
BLAST of CmoCh04G021410 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 81.6 bits (200), Expect = 2.6e-16
Identity = 35/76 (46.05%), Postives = 50/76 (65.79%), Query Frame = 1 

Query: 8  IMATFTATFMFLLALTNTQNAPRDYLALHNRARDQVGVGPMQWSNTVAAYSQAYVEKRKG 67
          I+    A    L+     Q++ +DY+  HN+AR Q+GVGPMQW   +AAY++ Y  + KG
Sbjct: 9  ILIILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKG 68

Query: 68 DCAMIHSTGPYGENIA 84
          DC ++HS GPYGEN+A
Sbjct: 69 DCRLVHSRGPYGENLA 84

[Close]
BLAST of CmoCh04G021410 vs. TAIR10
Match: AT2G19990.1 (AT2G19990.1 pathogenesis-related protein-1-like)

HSP 1 Score: 81.6 bits (200), Expect = 2.6e-16
Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 1 

Query: 21 ALTNTQNAPRDYLALHNRARDQVGVGPMQWSNTVAAYSQAYVEKRKGDCAMIHSTGPYGE 80
          A  N    P++ L +HN+AR  VGVGPM W+ T+A Y+Q+Y  +R  DCAM HS GP+GE
Sbjct: 34 ANANGDVKPQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGE 93

Query: 81 NIAAGY 87
          N+AAG+
Sbjct: 94 NLAAGW 99

[Close]
BLAST of CmoCh04G021410 vs. NCBI nr
Match: gi|778722387|ref|XP_011658476.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 124.8 bits (312), Expect = 7.5e-26
Identity = 54/80 (67.50%), Postives = 65/80 (81.25%), Query Frame = 1 

Query: 9  MATFTATFMFLLALTNTQNAPRDYLALHNRARDQVGVGPMQWSNTVAAYSQAYVEKRKGD 68
          MA    TFMFL  LT+ QN+P+DY++LHN+AR  VGVGPM W NTVAAY+Q+Y  KRK D
Sbjct: 1  MAILFPTFMFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKND 60

Query: 69 CAMIHSTGPYGENIAAGYYP 89
          CA++HSTGPYGENIA G+YP
Sbjct: 61 CALVHSTGPYGENIAIGFYP 80

[Close]
BLAST of CmoCh04G021410 vs. NCBI nr
Match: gi|700207816|gb|KGN62935.1| (hypothetical protein Csa_2G381130 [Cucumis sativus])

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-25
Identity = 55/80 (68.75%), Postives = 64/80 (80.00%), Query Frame = 1 

Query: 9  MATFTATFMFLLALTNTQNAPRDYLALHNRARDQVGVGPMQWSNTVAAYSQAYVEKRKGD 68
          MA F   F F   LT+ QNAP+DY++LHN+AR  VGVGPM W+NTVAAY+Q+Y  KRK D
Sbjct: 1  MAIFFPIFTFFFFLTHAQNAPQDYISLHNKARAAVGVGPMTWNNTVAAYAQSYANKRKND 60

Query: 69 CAMIHSTGPYGENIAAGYYP 89
          CA+IHSTGPYGENIA GYYP
Sbjct: 61 CALIHSTGPYGENIAVGYYP 80

[Close]
BLAST of CmoCh04G021410 vs. NCBI nr
Match: gi|700193135|gb|KGN48339.1| (hypothetical protein Csa_6G483242 [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 2.4e-24
Identity = 50/72 (69.44%), Postives = 61/72 (84.72%), Query Frame = 1 

Query: 17 MFLLALTNTQNAPRDYLALHNRARDQVGVGPMQWSNTVAAYSQAYVEKRKGDCAMIHSTG 76
          MFL  LT+ QN+P+DY++LHN+AR  VGVGPM W NTVAAY+Q+Y  KRK DCA++HSTG
Sbjct: 1  MFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTG 60

Query: 77 PYGENIAAGYYP 89
          PYGENIA G+YP
Sbjct: 61 PYGENIAIGFYP 72

[Close]
BLAST of CmoCh04G021410 vs. NCBI nr
Match: gi|659109009|ref|XP_008454501.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 119.4 bits (298), Expect = 3.2e-24
Identity = 52/80 (65.00%), Postives = 66/80 (82.50%), Query Frame = 1 

Query: 9  MATFTATFMFLLALTNTQNAPRDYLALHNRARDQVGVGPMQWSNTVAAYSQAYVEKRKGD 68
          MA F A+FMFL  LT+ QN+P+DY+ALHN+AR  VGVGPM W++T+AAY++AY  +R  D
Sbjct: 1  MAIFFASFMFLFFLTHAQNSPQDYIALHNKARAAVGVGPMTWNSTLAAYAEAYANQRIKD 60

Query: 69 CAMIHSTGPYGENIAAGYYP 89
          CA++HS GPYGENIA GYYP
Sbjct: 61 CALVHSKGPYGENIAVGYYP 80

[Close]
BLAST of CmoCh04G021410 vs. NCBI nr
Match: gi|700207817|gb|KGN62936.1| (hypothetical protein Csa_2G381380 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 7.1e-24
Identity = 52/80 (65.00%), Postives = 62/80 (77.50%), Query Frame = 1 

Query: 9  MATFTATFMFLLALTNTQNAPRDYLALHNRARDQVGVGPMQWSNTVAAYSQAYVEKRKGD 68
          MA F  TF FL  LT  Q +P+DY++LHN+AR  V VGPM W+ TVAAY+Q+Y  KRK D
Sbjct: 1  MAIFFPTFTFLFFLTQAQKSPQDYISLHNKARAAVRVGPMTWNKTVAAYAQSYANKRKND 60

Query: 69 CAMIHSTGPYGENIAAGYYP 89
          CA++HSTGPYGENIA GYYP
Sbjct: 61 CALVHSTGPYGENIAVGYYP 80

The following BLAST results are available for this feature:
BLAST of CmoCh04G021410 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PRB1_TOBAC1.8e-1958.23Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1[more]
PR1_ARATH2.9e-1750.65Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1[more]
PRB1_ARATH4.6e-1546.05Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1[more]
PR1A_SOLLC2.3e-1449.35Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1[more]
PR1B_TOBAC1.5e-1343.02Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1[more]
BLAST of CmoCh04G021410 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLX7_CUCSA9.0e-2668.75Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381130 PE=3 SV=1[more]
A0A0A0KHP4_CUCSA1.7e-2469.44Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1[more]
A0A0A0LSG5_CUCSA4.9e-2465.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1[more]
D7MGG3_ARALL3.4e-1758.82Putative uncharacterized protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata ... [more]
A0A151S107_CAJCA4.5e-1761.90Uncharacterized protein OS=Cajanus cajan GN=KK1_029844 PE=3 SV=1[more]
BLAST of CmoCh04G021410 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G33720.11.9e-1957.35 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT2G14610.11.6e-1850.65 pathogenesis-related gene 1[more]
AT1G50060.12.3e-1750.60 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT2G14580.12.6e-1646.05 basic pathogenesis-related protein 1[more]
AT2G19990.12.6e-1653.03 pathogenesis-related protein-1-like[more]
BLAST of CmoCh04G021410 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778722387|ref|XP_011658476.1|7.5e-2667.50PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus][more]
gi|700207816|gb|KGN62935.1|1.3e-2568.75hypothetical protein Csa_2G381130 [Cucumis sativus][more]
gi|700193135|gb|KGN48339.1|2.4e-2469.44hypothetical protein Csa_6G483242 [Cucumis sativus][more]
gi|659109009|ref|XP_008454501.1|3.2e-2465.00PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo][more]
gi|700207817|gb|KGN62936.1|7.1e-2465.00hypothetical protein Csa_2G381380 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001283Allrgn_V5/Tpx1
IPR014044CAP_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005576 extracellular region
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G021410.1CmoCh04G021410.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 17..86
score: 6.6
IPR014044CAP domainGENE3DG3DSA:3.40.33.10coord: 25..86
score: 4.1
IPR014044CAP domainPFAMPF00188CAPcoord: 33..83
score: 3.
IPR014044CAP domainSMARTSM00198SCP_3coord: 27..88
score: 6.
IPR014044CAP domainunknownSSF55797PR-1-likecoord: 25..87
score: 2.35
NoneNo IPR availablePANTHERPTHR10334:SF223F2J10.6 PROTEIN-RELATEDcoord: 17..86
score: 6.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G021410Cp4.1LG01g17810Cucurbita pepo (Zucchini)cmocpeB673
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G021410Cucumber (Gy14) v2cgybcmoB637
CmoCh04G021410Melon (DHL92) v3.6.1cmomedB719
CmoCh04G021410Melon (DHL92) v3.6.1cmomedB744
CmoCh04G021410Silver-seed gourdcarcmoB0896
CmoCh04G021410Watermelon (97103) v2cmowmbB680
CmoCh04G021410Watermelon (97103) v2cmowmbB740
CmoCh04G021410Wax gourdcmowgoB0827
CmoCh04G021410Wax gourdcmowgoB0909
CmoCh04G021410Cucurbita moschata (Rifu)cmocmoB270
CmoCh04G021410Cucurbita maxima (Rimu)cmacmoB729
CmoCh04G021410Cucurbita pepo (Zucchini)cmocpeB682
CmoCh04G021410Bottle gourd (USVL1VR-Ls)cmolsiB612
CmoCh04G021410Bottle gourd (USVL1VR-Ls)cmolsiB613
CmoCh04G021410Bottle gourd (USVL1VR-Ls)cmolsiB677