CmoCh04G021290 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAATGGAGCAATACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAGCCGGGCCGTACGGGGAAAACATAGCCGTTGGGTACTATCCTGAGTTCACCGGGGCGGATGCGGTGAAGCTGTGGGCGAACAAGAAGCCGTTGTATGATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAGCTCGGTCCGACTTGGATGTGCTAGAGTGCCCTGTAAGGCTAATTCTCAGTTTGTTGTTTGTAATTACAATCCTCCTGGCAACTATATTGGGGAAAAGTCTTATGATTCTTTGGTGGCTTGAAGAGATTTGGTTTTAAAAATTTTATGAATGGTAATAAAGTTTACGAGAGAATCATGAATTTATGAATTGAAATAAAGCTATGGTATTGTCTATAATAGTATTATATTGTCTTGTTTGAGTTAACTCTAGTGACTTTGTTTTAACCTCCTTGAGTTAACTCTTGTGACTTTGTTTTGACCTCCTCGCTTATAAACCCATGATCATAGAGTCTCCCCTCTAATTATGTACATCATAGAGCCACCCCTGAAGCCCGTTGATTTCTAAAACAACCTTCCCTTAATCGAGGCTCGACTACTTTCTTTGGAGCCTTTGAACAAAATACACCCTTTGTTCGACACTTTTGACTACAATTTTGAGGCTAACAATTTCTTTGTTCGACATAGCTAAGTTAAGTTCATGGACTAATAACCATGTTAAGAATCACGAATCTCTACAATGGTATATGATATTTGTCCACTTTCAACATGAGATTTTCTCATAGGTTTGCTTCGGGCTCCTAGAGATGTATTCTTTACTTATAAATCTACGATCATTTCCAAACAATCTTCAATACTGAGAACACCAGCCACCAGCCACCAGCCAATTCCTGTTCTAAGTCACTCAAAAGAAATGCCCTCGGCAGAGATGTGAAAAACCAGTCCACGGTGTTTTTGAACTCCAAATCGAGAGATGCACGGCGGCATTTAACTCCGCTGCACTATGAGACCCACACCGGAGAAAAAGGCCCACTGTCGTAACCTAAACTTTTAAAAAAACATACATATTCGTAAACTTTGAAAAGAGTAGGATAAGAAAATGTTTAACAATTTGTTATTTTAAAAGTGTCTAATAAGTCTCCAAATTTTAAAAAATTAACAATTTTTAATATAAAAATTTATCCTATTCAACTACTATTTTAAAAATGATGAATTTATGGGCTAGAATGGAAAGTTTAATGGATCACGTCAGACTAATCGTAGTGCAACCAAGTGAGTCAATTGGGTTAGCCACTAGCCGACTCTACCACACTCTACCACTAAACTTAGCCATGCCCTAAACTTAGCCATGTCAATAGAATACTCAAATGTCGAACAAAGGACTCCAAAAGAAAAAGGAAAAGAAAAGGAGTCGAGGGGAGGTGTTGGATGAAAGTCCCACTCGGCGAATTTAGGGAATGATCATGGGTCCATTAGGGTGAACTCAAAGTGGACAATATCTTCGTAATGGTATGATATTATGTGCTTTCTTACCAATACTGCAAAAATAAATGGAGAATTACCAAGTTTTAGGAACTATCCATCTCTACACTGATATGATACTGTCTAGTTTGAGATTAAGTACTTTCTGCTTTTTGTCCCATGAAATTATTCCTTACTTATAAATTCATGATCATTTCTTAAAGACTCTCTCTTAAAAATTTTACACACGGAGAATAGCTCCCAGAATAGCTATCAAATGTTGTTTGAAGTCAACGGGAATAAATGCCCACGACCGAGATGCGAAAAACCAGTCACGATGTTTCGGCCTCCAAATCGGGAGACCCACGACGGCGATTGGCTCTGCTGCACATAACTCAATAGTAATAAGATAACTTGATGGTGTTAATATAACACATGCGGAAGCAATTTGAATCTTAGGCACTTTTAGAACATCAATTATAATAAATAACTAGCATGTTCATAAGTATTAAAACTTAATGAGTTTAAATACTAACCTTTTGTAGTTCAAACTCCTTTTTCCTCACGAACCGGTTTCGAACCACCACTAGTGTCTTCTCCACTATCCTCCGGCCTTAGAACGGGATTGTGGAATCTGGTGAGTGACTAAACTTGGGAGGGATTTTGTATATGTGAAGAGAGTGTTTGTGAGAGGTTTTTCTCAAGGTTTTTCACCAAGAAGAAGAAGACGTTCCATGTACCATGATCACTCTATTTAAAGAGTCATGTTTGCATGTTTATGCAAATTTGAGATCACCAAATTTTGACACTTAAAATTCCACTCAAATGTTTGGGATTATGTGACAAGCAAGCATGTTTGAGTTAACCAAATTTTGACACTTAAAATTCCACTCAAACTTGTGGGGTTTATTCGGCAAGCATGCAAGTTTGGTTAAACCAAATTTTGACACCTCAAAATTTCACTAGAATGGATTTTTCCATTAAATGAAGTCAACATTTTGACTTTCTTCATTTTAATTCAACAATTAATTCGAATAATGAATTTCAAATTAAGGTAACATTAAATGATTAATTAAACTATTTAATTAATATTTAATATTAATTCATTTGCCAATCCCAATAAATCATGACACATAATTGATTAAGATATTTAAATTTTATTTAATATTAAGTCGTCAATAAAACAAAAATGCGGTTAAATATATCGTATATATGTAACGCGTATTCCCTAATTTAAATTCAAACACTTCGAACTCACTCGTCACACTGTTTTATGGTTTAGTCCGATATGAGCTAGCAGAGGGACCTAATGGACCTATAGATCATGGGCTCCAACGATCCAAGATTAACTGGCTAAACTCATTAACCTAGTTAACCAACATTCGTTAACTACTAGGACATTCCACTATAGTCTAGTAGTTGCACTCCCCTCACTATAGATATATTTCTTTCCATTTGATATAACCATGATTAGTAAGTCGATCCTTCACAGGTTGTTCGTAACTAGAGCTTGGTCAATTTACCGTTTTACCCCTAAAGTTACTTCTTGTTCCTCATGTCTCACTGATCCTCTAATGAACAATTGGTTTGTGGTCCAACCAGTAAACCGAATCCCTCTCAGGCTAATGAGAAGGTGGGGCCCCTTGTTCAAGACCTAGAGTCAGTGCTTAAGGAAACTACCTCTCTTCTATCCCTAAAAGTGGGTAAGAGTGAGTTCCATCTTGCACCCCACGTCCCCAGCCATTCACCCAGTCTTACCCCTGAAATGGGAAGCCTATTGAATCGGCGAACTAGAGCCACTCTCACCCATGAAAATTTAAGGATAATTCTAAATAAACAGGAGTTCATGGTTAGTTCAGGATTAAAACCGAGTTACCTAGGTTATCGAATGAAAAGAAAATCAGTCTCAACAATAAACGACATTATAAAGTGAGAGTGGTTTTCTTTATGATCTGATCTTATGAAATACTCATTGCGTAGGACGCCCCCACTCACATGTCTCCACACGTACAATTTAGTGATCACATTGTTTATATCATATACAAAAGTGAGCCGCATCCATAGTGTCCCCAAAATAAGGTACTCAGCCTTATCCTTATACTATAGATCATTTTGATTATATACTTGAACTTGATCCACTCTTATGTCTCTACATATAGTTCAAGTAATCATACTATAGCCAGAGTGTTCTAAGTTTATTGGATTTAGATTAATGATCGTAAAGTTCACTTTATTCAATAACAATCTTTACTGAATAAACAACAATAATAACTTTATTGAAAATAGAATATGTTTTTGTTTACAAACTATGAGTTTTAGGACATAAAACCCAACAAACTCCCACTTGGACTAAAACTCTAGTGGGGTTTTATAACGTTGAGTAGAGAGAAATACAATAAACTAGGGCATCACATACTCATGCCTTTTCTCCCACTTGCCCTAGATTACATAAATCGTAGTCCTAGACTCACTAGGTGCCCTTCAAACATTTCAGCCGTGAGGGGCTTTGTAAATGGATCTGCAATGTTGTGCTCTGAAGCTATCTGTGTGACAATCACATCTCCTCGTTGCACAATCTCCCTTATGAGACGATATTTACGCTCAATATGTTTTCCTCGCTTATGGCTTCTTGGTTCTTTTGAATTTGCAACTGCTCCACTGTTATCACAATAAAGAGTGACGGGAAGATGCATATTTAGAACGACTTCCAAATCAGTTAAGAACTTCCGAAGCCATACAGATTCTTTCACTGCTTCACAAGCAGCAACATACTCAGCCTCCATGGTGGAATCAGCAATGCAACCTTGCTTTATGCTTCTCCATATTATTGCTCCTCCGTTAAGAATTTTAAGCAAATATTAACATTATTTACTTATTTTTGAACATGTAATTAACCAATTCAATTTTAATATATATTTTATAAAATTGGAGAAGAATAAATAAATAAAGTTATGAAACTAAATAAAACAATAAATATATACCTACAAGTAAAAATGTATCTTTTAAGATTAACCATAATCAGGTGGATTAAGTTTCATTAGTCCTAAAAAAAATTCATAAACTAGCTAAATCTAGAAAATTTTCACTTATTTGAACCTAATCAAAACAAAAATCTAGCCCGTAATTAAACATGGAAGCGAGAATGAATTTATTCTCTTTGAATTCCCAAGCATGGCATAATTAGTTCATAATTCATGGTTTTCTCCATCACATTCCATATTAAGTTTTCCATCTCTATATACATCATTCCCTCATTCTCAATCTTCATCTCATCTCTCATCGGAATTATGTGGACTCAAACCCTTCCGATCATGGTCGCTTTCATTGCCACTTTCAATTTCCTCCTCGCCCTAACCAACGCTCAAAACGCCCTCGGTGACTACCTCGCGCTTCACAACCGAGCTCGAGCCAGGTCAGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGTCGCGGGCTACTACCCTGAGTTCACTGGGGCGGATGCGGTGAAGCTGTGGGTGAACGAGAAGCCGCTGTATGATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAGTACCCTGCAAGGCTAATTCTCAGTTTGTT ATGCAATGGAGCAATACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAGCCGGGCCGTACGGGGAAAACATAGCCGTTGGGTACTATCCTGAGTTCACCGGGGCGGATGCGGTGAAGCTGTGGGCGAACAAGAAGCCGTTGTATGATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAGCTCGGTCCGACTTGGATGTGCTAGAGTGCCCTGTAAGGCTAATTCTCAGTTTGTTGTTTGTAATTACAATCCTCCTGGCAACTATATTGGGGAAAACGTCGGCCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGTCGCGGGCTACTACCCTGAGTTCACTGGGGCGGATGCGGTGAAGCTGTGGGTGAACGAGAAGCCGCTGTATGATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAGTACCCTGCAAGGCTAATTCTCAGTTTGTT ATGCAATGGAGCAATACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAGCCGGGCCGTACGGGGAAAACATAGCCGTTGGGTACTATCCTGAGTTCACCGGGGCGGATGCGGTGAAGCTGTGGGCGAACAAGAAGCCGTTGTATGATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAGCTCGGTCCGACTTGGATGTGCTAGAGTGCCCTGTAAGGCTAATTCTCAGTTTGTTGTTTGTAATTACAATCCTCCTGGCAACTATATTGGGGAAAACGTCGGCCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGTCGCGGGCTACTACCCTGAGTTCACTGGGGCGGATGCGGTGAAGCTGTGGGTGAACGAGAAGCCGCTGTATGATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAGTACCCTGCAAGGCTAATTCTCAGTTTGTT
BLAST of CmoCh04G021290 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 2.1e-37 Identity = 68/112 (60.71%), Postives = 83/112 (74.11%), Query Frame = 1
BLAST of CmoCh04G021290 vs. Swiss-Prot
Match: PR1A_SOLLC (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 9.7e-35 Identity = 66/119 (55.46%), Postives = 83/119 (69.75%), Query Frame = 1
BLAST of CmoCh04G021290 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 2.0e-32 Identity = 62/114 (54.39%), Postives = 78/114 (68.42%), Query Frame = 1
BLAST of CmoCh04G021290 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 5.9e-32 Identity = 61/114 (53.51%), Postives = 77/114 (67.54%), Query Frame = 1
BLAST of CmoCh04G021290 vs. Swiss-Prot
Match: PR1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 5.9e-32 Identity = 60/112 (53.57%), Postives = 80/112 (71.43%), Query Frame = 1
BLAST of CmoCh04G021290 vs. TrEMBL
Match: F6HBL1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00910 PE=3 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 2.3e-67 Identity = 127/228 (55.70%), Postives = 151/228 (66.23%), Query Frame = 1
BLAST of CmoCh04G021290 vs. TrEMBL
Match: A0A067KWY2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09851 PE=3 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 4.5e-63 Identity = 115/233 (49.36%), Postives = 153/233 (65.67%), Query Frame = 1
BLAST of CmoCh04G021290 vs. TrEMBL
Match: A0A103XM86_CYNCS (Allergen V5/Tpx-1-related protein OS=Cynara cardunculus var. scolymus GN=Ccrd_004587 PE=3 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 1.2e-55 Identity = 114/219 (52.05%), Postives = 136/219 (62.10%), Query Frame = 1
BLAST of CmoCh04G021290 vs. TrEMBL
Match: A0A103XME5_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_004588 PE=3 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 1.6e-52 Identity = 113/243 (46.50%), Postives = 140/243 (57.61%), Query Frame = 1
BLAST of CmoCh04G021290 vs. TrEMBL
Match: M8BEE3_AEGTA (Cysteine-rich receptor-like protein kinase 29 OS=Aegilops tauschii GN=F775_23106 PE=3 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 1.8e-51 Identity = 106/251 (42.23%), Postives = 142/251 (56.57%), Query Frame = 1
BLAST of CmoCh04G021290 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein) HSP 1 Score: 143.3 bits (360), Expect = 1.8e-34 Identity = 62/111 (55.86%), Postives = 77/111 (69.37%), Query Frame = 1
BLAST of CmoCh04G021290 vs. TAIR10
Match: AT3G19690.1 (AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein) HSP 1 Score: 140.6 bits (353), Expect = 1.1e-33 Identity = 61/113 (53.98%), Postives = 81/113 (71.68%), Query Frame = 1
BLAST of CmoCh04G021290 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1) HSP 1 Score: 139.0 bits (349), Expect = 3.3e-33 Identity = 60/112 (53.57%), Postives = 80/112 (71.43%), Query Frame = 1
BLAST of CmoCh04G021290 vs. TAIR10
Match: AT2G19990.1 (AT2G19990.1 pathogenesis-related protein-1-like) HSP 1 Score: 136.0 bits (341), Expect = 2.8e-32 Identity = 63/114 (55.26%), Postives = 81/114 (71.05%), Query Frame = 1
BLAST of CmoCh04G021290 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein) HSP 1 Score: 135.6 bits (340), Expect = 3.7e-32 Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1
BLAST of CmoCh04G021290 vs. NCBI nr
Match: gi|643728186|gb|KDP36354.1| (hypothetical protein JCGZ_09851 [Jatropha curcas]) HSP 1 Score: 249.2 bits (635), Expect = 6.5e-63 Identity = 115/233 (49.36%), Postives = 153/233 (65.67%), Query Frame = 1
BLAST of CmoCh04G021290 vs. NCBI nr
Match: gi|802609354|ref|XP_012074124.1| (PREDICTED: pathogenesis-related protein PR-1 type-like [Jatropha curcas]) HSP 1 Score: 249.2 bits (635), Expect = 6.5e-63 Identity = 115/233 (49.36%), Postives = 153/233 (65.67%), Query Frame = 1
BLAST of CmoCh04G021290 vs. NCBI nr
Match: gi|976905745|gb|KVH93361.1| (Allergen V5/Tpx-1-related protein [Cynara cardunculus var. scolymus]) HSP 1 Score: 224.6 bits (571), Expect = 1.7e-55 Identity = 114/219 (52.05%), Postives = 136/219 (62.10%), Query Frame = 1
BLAST of CmoCh04G021290 vs. NCBI nr
Match: gi|985460428|ref|XP_006486819.2| (PREDICTED: pathogenesis-related protein 1-like [Citrus sinensis]) HSP 1 Score: 222.6 bits (566), Expect = 6.5e-55 Identity = 112/241 (46.47%), Postives = 144/241 (59.75%), Query Frame = 1
BLAST of CmoCh04G021290 vs. NCBI nr
Match: gi|976905743|gb|KVH93360.1| (hypothetical protein Ccrd_004588 [Cynara cardunculus var. scolymus]) HSP 1 Score: 214.2 bits (544), Expect = 2.3e-52 Identity = 113/243 (46.50%), Postives = 140/243 (57.61%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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