CmoCh04G020760 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G020760
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionATP synthase subunit a, chloroplastic
LocationCmo_Chr04 : 11888110 .. 11889614 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGTCCAGGTGGTTAAGATGTTTCCGAATGCTTGTACTCTACTCCTTTTGTTCTATGAATCCTGACTGACTCTGAATGCTTGTACTCTACTCCTTTTGTTCTATGAATCCCAACTGACTCTGCTATGCAATAATAAATCCTCATACATAGGAGTGAAAAGACCAATACAGATAGATAGAAAGCCAATGCTTTTCTCCTCGGAGCCAACAAAATCTTTCTTTCTTCCCCGTACAAAGGTCTAACCTTCTTTCTTTTCTTCTTTAATTGAGGAAGTTCTTTCTTTTTGTCTCAGATAGGAGGATGATATAATATCTGAATTCATTCTCTTCTTATAATAGGAGTTCTTTACAGGGGGTGGCGTGGTAATCAATCTGCACCAAGACCATGACCGCTATAATGCACGTTATCAAGGCCACTTCATTCATTAGTAAGTCAAGCCGAAAGATTCATTCTCTTCTCTTTTACTCTCCTGCCTGTAAGAAAGAGTCATTATCAATCACTACTTCACTTTCTTTCAGAGGGCAATATGAATATTTTATTATGTTCTATCAACACACAAAAAGGGTTATACGATATATCTGGTGTGTGGAAGTCGGCCAACATTTGTATTGGCAAATAGGAGGTTTCCAAGTACATGCCCAAGTACTTATTACTTCTTGGGTTGTAATTGCTATCTTATTAGGTTCAGCCATTATAGCTGTTCGTAATCCACAAACCATTCCTACTGACGGTCAGAATTTCTTCGAATATGTCCTTGAATTCATTCGAGGCGTAAGCAAAACCCAAATTGGCGAAGAATATGGTCCGTGGGTTCCCTTTATTGGAACTATGTTTCTATTTATTTTTGTTTCGAATTGGTCAGGGGCTCTTTTACCTTGGAAAATCATACAGTTACCTCACGGAGAGTTAGCCGCACCCACAAATGATATAAATACTACTGTTGCTTTAGCTTTACTCATATCAGTAGCATATTTCTATGCGGGTCTTAGCAAAAAAGGATTAAGTTATTTCGGTAAATACATTCAANGAATTCATTCGAGACGTGAGCAAAACCCAAATTGGCGAAGAATATGGTCCGTGGGTTCCCTTTATTGGAACTATGTTTCTATTTATTTTTGTTTCGAATTGGTCAGGGGCTCTTTTACCTTGGAAAATCATACAGTTACCTCACGGAGAGTTAGCCGCACCCACAAATGATATAAATACTACTGTTGCTTTAGCTTTACTCACATCAGTAGCATATTTCTATGCGGGTCTTAGCAAAAAAGGATTAAGTTATTTCGGTAAATACATTCAACCAACTCCAATCCTTTTACCCATTAACATCTTAGAAGATTTCACAAAACCCTTATCACTTAATTTTCGACTTTTCGAAAATATATTAGCCGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTACCTTTAGTAGCTCCTATACCTGTTATGTTCCTTGGATTATTTACAAGTGGTATTCAAGCTCTTATTTTTGCAACTTTAG

mRNA sequence

ATGTGGTCCAGAGGGCAATATGAATATTTTATTATGTTCTATCAACACACAAAAAGGGTTATACGATATATCTGGTGTGTGGAAGTCGGCCAACATTTGTATTGGCAAATAGGAGGTTTCCAAGTACATGCCCAAGTACTTATTACTTCTTGGGTTGTAATTGCTATCTTATTAGGTTCAGCCATTATAGCTGTTCGTAATCCACAAACCATTCCTACTGACGGTCAGAATTTCTTCGAATATGTCCTTGAATTCATTCGAGGCGTAAGCAAAACCCAAATTGGCGAAGAATATGGTCCGTGGGTTCCCTTTATTGGAACTATGTTTCTATTTATTTTTGTTTCGAATTGGTCAGGGGCTCTTTTACCTTGGAAAATCATACAGTTACCTCACGGAGAGTTAGCCGCACCCACAAATGATATAAATACTACTGTTGCTTTAGCTTTACTCATATCAGTAGCATATTTCTATGCGGGTCTTAGCAAAAAAGGATTAAGTTATTTCGGGGCTCTTTTACCTTGGAAAATCATACAGTTACCTCACGGAGAGTTAGCCGCACCCACAAATGATATAAATACTACTGTTGCTTTAGCTTTACTCACATCAGTAGCATATTTCTATGCGGGTCTTAGCAAAAAAGGATTAAGTTATTTCGGTAAATACATTCAACCAACTCCAATCCTTTTACCCATTAACATCTTAGAAGATTTCACAAAACCCTTATCACTTAATTTTCGACTTTTCGAAAATATATTAGCCGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTACCTTTACTCCTATACCTGTTATGTTCCTTGGATTATTTACAAGTGGTATTCAAGCTCTTATTTTTGCAACTTTAG

Coding sequence (CDS)

ATGTGGTCCAGAGGGCAATATGAATATTTTATTATGTTCTATCAACACACAAAAAGGGTTATACGATATATCTGGTGTGTGGAAGTCGGCCAACATTTGTATTGGCAAATAGGAGGTTTCCAAGTACATGCCCAAGTACTTATTACTTCTTGGGTTGTAATTGCTATCTTATTAGGTTCAGCCATTATAGCTGTTCGTAATCCACAAACCATTCCTACTGACGGTCAGAATTTCTTCGAATATGTCCTTGAATTCATTCGAGGCGTAAGCAAAACCCAAATTGGCGAAGAATATGGTCCGTGGGTTCCCTTTATTGGAACTATGTTTCTATTTATTTTTGTTTCGAATTGGTCAGGGGCTCTTTTACCTTGGAAAATCATACAGTTACCTCACGGAGAGTTAGCCGCACCCACAAATGATATAAATACTACTGTTGCTTTAGCTTTACTCATATCAGTAGCATATTTCTATGCGGGTCTTAGCAAAAAAGGATTAAGTTATTTCGGGGCTCTTTTACCTTGGAAAATCATACAGTTACCTCACGGAGAGTTAGCCGCACCCACAAATGATATAAATACTACTGTTGCTTTAGCTTTACTCACATCAGTAGCATATTTCTATGCGGGTCTTAGCAAAAAAGGATTAAGTTATTTCGGTAAATACATTCAACCAACTCCAATCCTTTTACCCATTAACATCTTAGAAGATTTCACAAAACCCTTATCACTTAATTTTCGACTTTTCGAAAATATATTAGCCGATGAATTAGTAGTTGTTGTTCTTGTTTCTTTAGTACCTTTACTCCTATACCTGTTATGTTCCTTGGATTATTTACAAGTGGTATTCAAGCTCTTATTTTTGCAACTTTAG
Homology
[Close]
BLAST of CmoCh04G020760 vs. Swiss-Prot
Match: ATPI_CUCSA (ATP synthase subunit a, chloroplastic OS=Cucumis sativus GN=atpI PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.1e-77
Identity = 146/165 (88.48%), Postives = 151/165 (91.52%), Query Frame = 1 

Query: 16  HTKRVIRYIWCVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 75
           +T++ +  I  VEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG
Sbjct: 9   NTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 68

Query: 76  QNFFEYVLEFIRGVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 135
           QNFFEYVLEFIR VSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA
Sbjct: 69  QNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 128

Query: 136 APTNDINTTVALALLISVAYFYAGLSKKGLSYFGALLPWKIIQLP 181
           APTNDINTTVALALL SVAYFYAGLSKKGLSYFG  +    I LP
Sbjct: 129 APTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLP 173

[Close]
BLAST of CmoCh04G020760 vs. Swiss-Prot
Match: ATPI_BUXMI (ATP synthase subunit a, chloroplastic OS=Buxus microphylla GN=atpI PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.2e-75
Identity = 142/165 (86.06%), Postives = 148/165 (89.70%), Query Frame = 1 

Query: 16  HTKRVIRYIWCVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 75
           +T +V+  I  VEVGQH YWQIGGFQVHAQVLITSWVVIAILLGSA IAVRNPQTIPTDG
Sbjct: 9   NTLKVLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSATIAVRNPQTIPTDG 68

Query: 76  QNFFEYVLEFIRGVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 135
           QNFFEYVLEFIR +SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA
Sbjct: 69  QNFFEYVLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 128

Query: 136 APTNDINTTVALALLISVAYFYAGLSKKGLSYFGALLPWKIIQLP 181
           APTNDINTTVALALL SVAYFYAGL+KKGL YFG  +    I LP
Sbjct: 129 APTNDINTTVALALLTSVAYFYAGLTKKGLGYFGKYIQPTPILLP 173

[Close]
BLAST of CmoCh04G020760 vs. Swiss-Prot
Match: ATPI_MORIN (ATP synthase subunit a, chloroplastic OS=Morus indica GN=atpI PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.0e-75
Identity = 139/154 (90.26%), Postives = 144/154 (93.51%), Query Frame = 1 

Query: 27  VEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFI 86
           VEVGQHLYW+IGGFQVHAQVLITSWVVIAILLGS+IIAVRNPQTIPTDGQNFFEYVLEFI
Sbjct: 20  VEVGQHLYWKIGGFQVHAQVLITSWVVIAILLGSSIIAVRNPQTIPTDGQNFFEYVLEFI 79

Query: 87  RGVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVA 146
           R VS+TQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVA
Sbjct: 80  RDVSRTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVA 139

Query: 147 LALLISVAYFYAGLSKKGLSYFGALLPWKIIQLP 181
           LALL SVAYFYAGL+KKGL YFG  +    I LP
Sbjct: 140 LALLTSVAYFYAGLTKKGLGYFGKYIQPTPILLP 173

[Close]
BLAST of CmoCh04G020760 vs. Swiss-Prot
Match: ATPI_ILLOL (ATP synthase subunit a, chloroplastic OS=Illicium oligandrum GN=atpI PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 2.2e-74
Identity = 138/154 (89.61%), Postives = 141/154 (91.56%), Query Frame = 1 

Query: 27  VEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFI 86
           VEVGQH YWQIGGFQVHAQVLITSWVVIAILLGSA IAVRNPQTIPTDGQNFFEYVLEFI
Sbjct: 20  VEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAAIAVRNPQTIPTDGQNFFEYVLEFI 79

Query: 87  RGVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVA 146
           R +SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVA
Sbjct: 80  RDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVA 139

Query: 147 LALLISVAYFYAGLSKKGLSYFGALLPWKIIQLP 181
           LAL  SVAYFYAGL+KKGL YFG  +    I LP
Sbjct: 140 LALPTSVAYFYAGLTKKGLGYFGKYIQPTPILLP 173

[Close]
BLAST of CmoCh04G020760 vs. Swiss-Prot
Match: ATPI_RANMC (ATP synthase subunit a, chloroplastic OS=Ranunculus macranthus GN=atpI PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 2.2e-74
Identity = 138/154 (89.61%), Postives = 141/154 (91.56%), Query Frame = 1 

Query: 27  VEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFI 86
           VEVGQH YWQIGGFQVHAQVLITSW VIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFI
Sbjct: 20  VEVGQHFYWQIGGFQVHAQVLITSWFVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFI 79

Query: 87  RGVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVA 146
           R +SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVA
Sbjct: 80  RDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVA 139

Query: 147 LALLISVAYFYAGLSKKGLSYFGALLPWKIIQLP 181
           LAL  SVAYFYAGL+KKGL YFG  +    I LP
Sbjct: 140 LALPTSVAYFYAGLTKKGLGYFGKYIQPTPILLP 173

[Close]
BLAST of CmoCh04G020760 vs. TrEMBL
Match: X2F3A5_LAGSI (ATP synthase subunit a, chloroplastic OS=Lagenaria siceraria GN=atpI PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.4e-75
Identity = 146/165 (88.48%), Postives = 151/165 (91.52%), Query Frame = 1 

Query: 16  HTKRVIRYIWCVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 75
           +T++ +  I  VEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG
Sbjct: 9   NTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 68

Query: 76  QNFFEYVLEFIRGVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 135
           QNFFEYVLEFIR VSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA
Sbjct: 69  QNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 128

Query: 136 APTNDINTTVALALLISVAYFYAGLSKKGLSYFGALLPWKIIQLP 181
           APTNDINTTVALALL SVAYFYAGLSKKGLSYFG  +    I LP
Sbjct: 129 APTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLP 173

[Close]
BLAST of CmoCh04G020760 vs. TrEMBL
Match: X2EY56_LAGSI (ATP synthase subunit a, chloroplastic OS=Lagenaria siceraria GN=atpI PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.4e-75
Identity = 146/165 (88.48%), Postives = 151/165 (91.52%), Query Frame = 1 

Query: 16  HTKRVIRYIWCVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 75
           +T++ +  I  VEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG
Sbjct: 9   NTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 68

Query: 76  QNFFEYVLEFIRGVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 135
           QNFFEYVLEFIR VSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA
Sbjct: 69  QNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 128

Query: 136 APTNDINTTVALALLISVAYFYAGLSKKGLSYFGALLPWKIIQLP 181
           APTNDINTTVALALL SVAYFYAGLSKKGLSYFG  +    I LP
Sbjct: 129 APTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLP 173

[Close]
BLAST of CmoCh04G020760 vs. TrEMBL
Match: A0A0S2IH07_CUCPE (AtpI OS=Cucurbita pepo subsp. fraterna GN=atpI PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.4e-75
Identity = 146/165 (88.48%), Postives = 151/165 (91.52%), Query Frame = 1 

Query: 16  HTKRVIRYIWCVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 75
           +T++ +  I  VEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG
Sbjct: 9   NTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 68

Query: 76  QNFFEYVLEFIRGVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 135
           QNFFEYVLEFIR VSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA
Sbjct: 69  QNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 128

Query: 136 APTNDINTTVALALLISVAYFYAGLSKKGLSYFGALLPWKIIQLP 181
           APTNDINTTVALALL SVAYFYAGLSKKGLSYFG  +    I LP
Sbjct: 129 APTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLP 173

[Close]
BLAST of CmoCh04G020760 vs. TrEMBL
Match: X2F8K0_LAGSI (ATP synthase subunit a, chloroplastic OS=Lagenaria siceraria GN=atpI PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.4e-75
Identity = 146/165 (88.48%), Postives = 151/165 (91.52%), Query Frame = 1 

Query: 16  HTKRVIRYIWCVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 75
           +T++ +  I  VEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG
Sbjct: 9   NTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 68

Query: 76  QNFFEYVLEFIRGVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 135
           QNFFEYVLEFIR VSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA
Sbjct: 69  QNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 128

Query: 136 APTNDINTTVALALLISVAYFYAGLSKKGLSYFGALLPWKIIQLP 181
           APTNDINTTVALALL SVAYFYAGLSKKGLSYFG  +    I LP
Sbjct: 129 APTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLP 173

[Close]
BLAST of CmoCh04G020760 vs. TrEMBL
Match: X2F8D2_LAGSI (ATP synthase subunit a, chloroplastic OS=Lagenaria siceraria GN=atpI PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.4e-75
Identity = 146/165 (88.48%), Postives = 151/165 (91.52%), Query Frame = 1 

Query: 16  HTKRVIRYIWCVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 75
           +T++ +  I  VEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG
Sbjct: 9   NTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 68

Query: 76  QNFFEYVLEFIRGVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 135
           QNFFEYVLEFIR VSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA
Sbjct: 69  QNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 128

Query: 136 APTNDINTTVALALLISVAYFYAGLSKKGLSYFGALLPWKIIQLP 181
           APTNDINTTVALALL SVAYFYAGLSKKGLSYFG  +    I LP
Sbjct: 129 APTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLP 173

[Close]
BLAST of CmoCh04G020760 vs. TAIR10
Match: ATCG00150.1 (ATCG00150.1 ATPase, F0 complex, subunit A protein)

HSP 1 Score: 277.7 bits (709), Expect = 8.1e-75
Identity = 135/154 (87.66%), Postives = 141/154 (91.56%), Query Frame = 1 

Query: 27  VEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFI 86
           VEVGQH YWQIGGFQVHAQVLITSWVVIAILLGSA++A+RNPQTIPTDGQNFFE+VLEFI
Sbjct: 22  VEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAVLAIRNPQTIPTDGQNFFEFVLEFI 81

Query: 87  RGVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVA 146
           R VSKTQIGEEYGPWVPFIGT+FLFIFVSNWSGALLPWKIIQLP GELAAPTNDINTTVA
Sbjct: 82  RDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIQLPQGELAAPTNDINTTVA 141

Query: 147 LALLISVAYFYAGLSKKGLSYFGALLPWKIIQLP 181
           LALL SVAYFYAGLSKKGL YF   +    I LP
Sbjct: 142 LALLTSVAYFYAGLSKKGLGYFSKYIQPTPILLP 175

[Close]
BLAST of CmoCh04G020760 vs. NCBI nr
Match: gi|595647694|gb|AHM91116.1| (ATP synthase CF0 subunit IV (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 290.4 bits (742), Expect = 3.4e-75
Identity = 146/165 (88.48%), Postives = 151/165 (91.52%), Query Frame = 1 

Query: 16  HTKRVIRYIWCVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 75
           +T++ +  I  VEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG
Sbjct: 9   NTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 68

Query: 76  QNFFEYVLEFIRGVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 135
           QNFFEYVLEFIR VSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA
Sbjct: 69  QNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 128

Query: 136 APTNDINTTVALALLISVAYFYAGLSKKGLSYFGALLPWKIIQLP 181
           APTNDINTTVALALL SVAYFYAGLSKKGLSYFG  +    I LP
Sbjct: 129 APTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLP 173

[Close]
BLAST of CmoCh04G020760 vs. NCBI nr
Match: gi|68164791|ref|YP_247587.1| (ATP synthase CF0 A subunit [Cucumis sativus])

HSP 1 Score: 290.4 bits (742), Expect = 3.4e-75
Identity = 146/165 (88.48%), Postives = 151/165 (91.52%), Query Frame = 1 

Query: 16  HTKRVIRYIWCVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 75
           +T++ +  I  VEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG
Sbjct: 9   NTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 68

Query: 76  QNFFEYVLEFIRGVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 135
           QNFFEYVLEFIR VSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA
Sbjct: 69  QNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 128

Query: 136 APTNDINTTVALALLISVAYFYAGLSKKGLSYFGALLPWKIIQLP 181
           APTNDINTTVALALL SVAYFYAGLSKKGLSYFG  +    I LP
Sbjct: 129 APTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLP 173

[Close]
BLAST of CmoCh04G020760 vs. NCBI nr
Match: gi|595647755|gb|AHM91176.1| (ATP synthase CF0 subunit IV (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 290.4 bits (742), Expect = 3.4e-75
Identity = 146/165 (88.48%), Postives = 151/165 (91.52%), Query Frame = 1 

Query: 16  HTKRVIRYIWCVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 75
           +T++ +  I  VEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG
Sbjct: 9   NTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 68

Query: 76  QNFFEYVLEFIRGVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 135
           QNFFEYVLEFIR VSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA
Sbjct: 69  QNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 128

Query: 136 APTNDINTTVALALLISVAYFYAGLSKKGLSYFGALLPWKIIQLP 181
           APTNDINTTVALALL SVAYFYAGLSKKGLSYFG  +    I LP
Sbjct: 129 APTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLP 173

[Close]
BLAST of CmoCh04G020760 vs. NCBI nr
Match: gi|595645357|gb|AHM88818.1| (ATP synthase CF0 subunit IV (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 290.4 bits (742), Expect = 3.4e-75
Identity = 146/165 (88.48%), Postives = 151/165 (91.52%), Query Frame = 1 

Query: 16  HTKRVIRYIWCVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 75
           +T++ +  I  VEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG
Sbjct: 9   NTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 68

Query: 76  QNFFEYVLEFIRGVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 135
           QNFFEYVLEFIR VSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA
Sbjct: 69  QNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 128

Query: 136 APTNDINTTVALALLISVAYFYAGLSKKGLSYFGALLPWKIIQLP 181
           APTNDINTTVALALL SVAYFYAGLSKKGLSYFG  +    I LP
Sbjct: 129 APTNDINTTVALALLTSVAYFYAGLSKKGLSYFGKYIQPTPILLP 173

[Close]
BLAST of CmoCh04G020760 vs. NCBI nr
Match: gi|290490270|gb|ADD31542.1| (ATP synthase CF0 subunit IV protein (chloroplast) [Dillenia indica])

HSP 1 Score: 288.9 bits (738), Expect = 9.9e-75
Identity = 145/165 (87.88%), Postives = 149/165 (90.30%), Query Frame = 1 

Query: 16  HTKRVIRYIWCVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 75
           +T +V+  I  VEVGQH YWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG
Sbjct: 9   NTLKVLYDISGVEVGQHFYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDG 68

Query: 76  QNFFEYVLEFIRGVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 135
           QNFFEYVLEFIR VSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA
Sbjct: 69  QNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELA 128

Query: 136 APTNDINTTVALALLISVAYFYAGLSKKGLSYFGALLPWKIIQLP 181
           APTNDINTTVALALL SVAYFYAGLSKKGL YFG  +    I LP
Sbjct: 129 APTNDINTTVALALLTSVAYFYAGLSKKGLGYFGKYIQPTPILLP 173

The following BLAST results are available for this feature:
BLAST of CmoCh04G020760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATPI_CUCSA2.1e-7788.48ATP synthase subunit a, chloroplastic OS=Cucumis sativus GN=atpI PE=3 SV=1[more]
ATPI_BUXMI1.2e-7586.06ATP synthase subunit a, chloroplastic OS=Buxus microphylla GN=atpI PE=3 SV=1[more]
ATPI_MORIN2.0e-7590.26ATP synthase subunit a, chloroplastic OS=Morus indica GN=atpI PE=3 SV=1[more]
ATPI_ILLOL2.2e-7489.61ATP synthase subunit a, chloroplastic OS=Illicium oligandrum GN=atpI PE=3 SV=1[more]
ATPI_RANMC2.2e-7489.61ATP synthase subunit a, chloroplastic OS=Ranunculus macranthus GN=atpI PE=3 SV=1[more]
BLAST of CmoCh04G020760 vs. TrEMBL
Match NameE-valueIdentityDescription
X2F3A5_LAGSI2.4e-7588.48ATP synthase subunit a, chloroplastic OS=Lagenaria siceraria GN=atpI PE=3 SV=1[more]
X2EY56_LAGSI2.4e-7588.48ATP synthase subunit a, chloroplastic OS=Lagenaria siceraria GN=atpI PE=3 SV=1[more]
A0A0S2IH07_CUCPE2.4e-7588.48AtpI OS=Cucurbita pepo subsp. fraterna GN=atpI PE=3 SV=1[more]
X2F8K0_LAGSI2.4e-7588.48ATP synthase subunit a, chloroplastic OS=Lagenaria siceraria GN=atpI PE=3 SV=1[more]
X2F8D2_LAGSI2.4e-7588.48ATP synthase subunit a, chloroplastic OS=Lagenaria siceraria GN=atpI PE=3 SV=1[more]
BLAST of CmoCh04G020760 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00150.18.1e-7587.66ATCG00150.1 ATPase, F0 complex, subunit A protein[more]
BLAST of CmoCh04G020760 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|595647694|gb|AHM91116.1|3.4e-7588.48ATP synthase CF0 subunit IV (chloroplast) [Lagenaria siceraria][more]
gi|68164791|ref|YP_247587.1|3.4e-7588.48ATP synthase CF0 A subunit [Cucumis sativus][more]
gi|595647755|gb|AHM91176.1|3.4e-7588.48ATP synthase CF0 subunit IV (chloroplast) [Lagenaria siceraria][more]
gi|595645357|gb|AHM88818.1|3.4e-7588.48ATP synthase CF0 subunit IV (chloroplast) [Lagenaria siceraria][more]
gi|290490270|gb|ADD31542.1|9.9e-7587.88ATP synthase CF0 subunit IV protein (chloroplast) [Dillenia indica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000568ATP_synth_F0_asu
Vocabulary: Molecular Function
TermDefinition
GO:0015078hydrogen ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0009507 chloroplast
cellular_component GO:0044425 membrane part
cellular_component GO:0009579 thylakoid
molecular_function GO:0015078 hydrogen ion transmembrane transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G020760.1CmoCh04G020760.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000568ATPase, F0 complex, subunit APRINTSPR00123ATPASEAcoord: 223..238
score: 9.2E-7coord: 239..261
score: 9.2E-7coord: 149..165
score: 9.
IPR000568ATPase, F0 complex, subunit AGENE3DG3DSA:1.20.120.220coord: 97..172
score: 2.9E-14coord: 184..274
score: 4.0
IPR000568ATPase, F0 complex, subunit AHAMAPMF_01393ATP_synth_a_bactcoord: 30..285
score: 1
IPR000568ATPase, F0 complex, subunit APANTHERPTHR11410ATP SYNTHASE SUBUNIT Acoord: 27..123
score: 3.0E-87coord: 182..272
score: 3.0
IPR000568ATPase, F0 complex, subunit APFAMPF00119ATP-synt_Acoord: 48..174
score: 1.2E-25coord: 185..285
score: 7.4
IPR000568ATPase, F0 complex, subunit AunknownSSF81336F1F0 ATP synthase subunit Acoord: 178..274
score: 5.62E-19coord: 96..173
score: 8.63

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G020760Watermelon (97103) v2cmowmbB699
CmoCh04G020760Wax gourdcmowgoB0902
CmoCh04G020760Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G020760Cucurbita maxima (Rimu)cmacmoB741
CmoCh04G020760Watermelon (Charleston Gray)cmowcgB623
CmoCh04G020760Watermelon (97103) v1cmowmB733
CmoCh04G020760Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G020760Cucurbita pepo (Zucchini)cmocpeB680
CmoCh04G020760Cucurbita pepo (Zucchini)cmocpeB682
CmoCh04G020760Bottle gourd (USVL1VR-Ls)cmolsiB623