CmoCh04G020750 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G020750
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Descriptionphotosynthetic electron transfer A chrC:61657-62619 FORWARD
LocationCmo_Chr04 : 11872850 .. 11873331 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAATGAAGAGTTCCCTGCCCCTGCAAGCATCTACTCCTATCAAAATGAAAAGCGTGATTTTACTAAACAAGCAAGAAAATTCCTTTCTATTAATCAAGGGCTTTAGGCTTTACTAATAACAAGCATAAAAGGTAAGTAAGGCTTTTGAGCTGTAGCTTTACAACGAGAGAGAGAGAGCTTAGATAGGGCCCTTTCTTCTTATTAGTCTTATTAGTCAGATAGGTTGGTTGTTTGAGCGCATTTTGGAGTGTGCTGTGGCTAATACCCGAGGCATAAAAGAAGCATTTTCAACGGGATCTCGAAACCACCAGCCACCTCGACCTAATTCATGGGCTCATCATGAAAGTTCTTGCTAATAAGAATGTGTGGGCTGTTCTTATTCTACCGGAGGGGTTTGAATTAACTCTTTGCGATCGTATTTCTACCGAGATTAAAGAAATTCTATCCATATACGTTCTGATCGCCAACTCATACTAG

mRNA sequence

ATGAAGAATGAAGAGTTCCCTGCCCCTGCAAGCATCTACTCCTATCAAAATGAAAAGCTTCTTGCTAATAAGAATGTGTGGGCTGTTCTTATTCTACCGGAGGGGTTTGAATTAACTCTTTGCGATCGTATTTCTACCGAGATTAAAGAAATTCTATCCATATACGTTCTGATCGCCAACTCATACTAG

Coding sequence (CDS)

ATGAAGAATGAAGAGTTCCCTGCCCCTGCAAGCATCTACTCCTATCAAAATGAAAAGCTTCTTGCTAATAAGAATGTGTGGGCTGTTCTTATTCTACCGGAGGGGTTTGAATTAACTCTTTGCGATCGTATTTCTACCGAGATTAAAGAAATTCTATCCATATACGTTCTGATCGCCAACTCATACTAG
The following BLAST results are available for this feature:
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Match NameE-valueIdentityDescription
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The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR024094Cyt_f_lg_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G020750.1CmoCh04G020750.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024094Cytochrome f large domainGENE3DG3DSA:2.60.40.830coord: 21..53
score: 2.
IPR024094Cytochrome f large domainunknownSSF49441Cytochrome f, large domaincoord: 17..55
score: 2.4

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None