CmoCh04G020130 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G020130
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(Lysosomal Pro-X carboxypeptidase, putative) (3.4.16.2)
LocationCmo_Chr04 : 10743997 .. 10745681 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGATGCCATTAAGCACAGGCAATGATACTATGTTTCCAGCATACAATTTTGAGCTTGGAAGCTTCATAGATTACTGCAATGAGTTATACTGATACTATGTTTCCAGCATACAATTTTGAGCTTGGAAGCTTCATAGATTACTGCAATGAGTTATACCGTGTGTCTGTTTCCAGCATACAATTTTGAGCTTGGAAGCTTCATAGATTACTGCAATGAGTTATACCGTGTGTCTGTTTCCAGCATACAATTTTGAGCTTGGAAGCTTCATAGATTACTGCAATGAGTTATACCGTGTGTCTCCAAGGCCTCACTAATTTTGAGCTTGGAAGCTTCATAGATTACTGCAATGAGTTATACCGTGTGTCTCCAAGGCCTCACTAGGTCACCACCTATTATGGAGGCCATGTATGCACTTCAACCACCTCTCTCTTTTTCTTTATTTTCTTTATTGAAATTACTGTAACCGCCCAAATCTACAGTAGATATTGTCTTTCTCTGACTTTCTTTTCCAGGCTTCCCCTCAAAGTTTTTAAAACTTCACCCCCGTAAAGAATGTTTTGTTCTCCTCCCCAACCAATGTGGGATCTCACAATCCACCCCCTCCCCCGGGGCCAGCGTCCTCGTTGGCACTCGTTCCTTTCTTCAATCGATGTGGGACTCCACAATCCACTCCACCCTCGAGGCCCAGCGTCCTTACTGGCACACCGCCTCGTATCCACCCCCCTTCGGGGTGCATCCGACCATTCTGTTAGTGGATCTCACAATCCACTCCCTCGAGGCCCAGCGTCCTTACTGGCACACCGCCTCGTATCCACCCCCTTCGGGGCCCACCACTAAATGATATCATCCTCTTTGTGTTTCCCCTCAAGGTTTTTTATATTAGAGAGATTTCCACGCCCTTATAAACAATGTTTTTTTTTTCTCCTCATCAACTGATATAGGATCTTACAATCCACCCCCCTCGGGACCCAGCGTCCTTGTTGGCACACCGCCTCGTGTCCACCCCCGTCAGGGATCAGCCTCCTCGCTGGCACATCACCCAGTGTCTGGCTCTGATACCATTTGTAACAGTCCAACCCCACCGCTAACATATATTATCCTCTTTGAGCTTTCCCTTTCAAGCTTCCCTTTTAAGGTTTCTAAAACGCGTCTACTAGGGAGAGGTTTCCGCACGCTCATAAATAATAGTTCGTTCTCCTCCCTAACCGACGTAGAATCTCACAATTTCTTTGTCTCCCTTCAAATTTCAGGACATAAAACTCATCCTTAAGAGATTTGGCAGCAACGTCATTTTCTCCAATGGACTAAGGGACCCTTATAGCAGCGGCGGGTAAACGAAAACCAAAGCTACAACATTTATTGCACATAAAGAACAATCAACTTTACTTCAACTCTCTCTCTCTCTTTTTGTGAATGCAGAGTGTTGCATAACTTATCTGACAGTCTCCTTGCACTCCATACGCCTAATGGTTTGATTCAGACTCCTAAATTCTAACTTCAAAGCTTTGTTCTTTTGAGCTGACATGTTTTGAACTTTCCAGGATCTCATTGTTTGGACATTTTACGAGCAAATGAAACGGATCCACAGTGGTTGGTGGAACAAAGAGAGACAGAGGTTAACATCATTAAAGGATGGATCAGTAAGTACTATGCTGATCTTGGCAGTCCAAACAATATATAA

mRNA sequence

ATGGTGATGCCATTAAGCACAGGCAATGATACTATGTTTCCAGCATACAATTTTGAGCTTGGAAGCTTCATAGATTACTGCAATGAAGTGTTGCATAACTTATCTGACAGTCTCCTTGCACTCCATACGCCTAATGGATCTCATTGTTTGGACATTTTACGAGCAAATGAAACGGATCCACAGTGGTTGGTGGAACAAAGAGAGACAGAGGTTAACATCATTAAAGGATGGATCAGTAAGTACTATGCTGATCTTGGCAGTCCAAACAATATATAA

Coding sequence (CDS)

ATGGTGATGCCATTAAGCACAGGCAATGATACTATGTTTCCAGCATACAATTTTGAGCTTGGAAGCTTCATAGATTACTGCAATGAAGTGTTGCATAACTTATCTGACAGTCTCCTTGCACTCCATACGCCTAATGGATCTCATTGTTTGGACATTTTACGAGCAAATGAAACGGATCCACAGTGGTTGGTGGAACAAAGAGAGACAGAGGTTAACATCATTAAAGGATGGATCAGTAAGTACTATGCTGATCTTGGCAGTCCAAACAATATATAA
BLAST of CmoCh04G020130 vs. Swiss-Prot
Match: PCP_BOVIN (Lysosomal Pro-X carboxypeptidase OS=Bos taurus GN=PRCP PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 8.9e-06
Identity = 24/60 (40.00%), Postives = 35/60 (58.33%), Query Frame = 1

Query: 30  VLHNLSDSLLALHTPNGSHCLDILRANETDPQWLVEQRETEVNIIKGWISKYYADLGSPN 89
           V  +++D+LLA+  PNG+H LD+  +N  DP  +   R  EV  +K WIS +Y  L   N
Sbjct: 440 VTKDITDTLLAIVIPNGAHHLDLRASNALDPVSVQLTRSLEVKYMKQWISDFYVRLRKMN 499

BLAST of CmoCh04G020130 vs. TrEMBL
Match: A0A0A0KAY8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G149410 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.6e-28
Identity = 71/136 (52.21%), Postives = 77/136 (56.62%), Query Frame = 1

Query: 1   MVMPLSTGNDTMFPAYNFELGSFIDYCNE------------------------------- 60
           MVMPLST NDTMFP   F+L SF+DYC +                               
Sbjct: 363 MVMPLSTTNDTMFPPITFDLKSFVDYCYQLYGVSSRPHWVTTYYGGNDIKLILQRFGSNI 422

Query: 61  --------------VLHNLSDSLLALHTPNGSHCLDILRANETDPQWLVEQRETEVNIIK 92
                         VL NLSDSLLA+HTP GSHCLDILRANETDPQWLV+QRETEV II+
Sbjct: 423 IFSNGLRDPYSSGGVLQNLSDSLLAVHTPKGSHCLDILRANETDPQWLVKQRETEVRIIE 482

BLAST of CmoCh04G020130 vs. TrEMBL
Match: A0A0A0KDH5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G149400 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 5.6e-23
Identity = 61/132 (46.21%), Postives = 72/132 (54.55%), Query Frame = 1

Query: 1   MVMPLSTGNDTMFPAYNFELGSFIDYCNE------------------------------- 60
           MVMP+STGNDTMFP+  F+  SF  YCN+                               
Sbjct: 357 MVMPISTGNDTMFPSETFDHESFSIYCNQLYGVTPRPHWVTTYYGGHDIHLILHRFASNI 416

Query: 61  --------------VLHNLSDSLLALHTPNGSHCLDILRANETDPQWLVEQRETEVNIIK 88
                         VLHN+SDSLLA++T NGSHCLDIL AN  DP+WLV QR+TEV IIK
Sbjct: 417 IFSNGLKDPYSIGGVLHNISDSLLAVYTANGSHCLDILTANRMDPEWLVTQRKTEVGIIK 476

BLAST of CmoCh04G020130 vs. TrEMBL
Match: A0A0A0KBK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G149390 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.8e-21
Identity = 60/130 (46.15%), Postives = 73/130 (56.15%), Query Frame = 1

Query: 1   MVMPLSTGNDTMFPAYNFELGSFIDYCNE------------------------------- 60
           MVMP+ + +D MFP   F+L S I+YCN                                
Sbjct: 378 MVMPIGSDDD-MFPPSPFDLQSVINYCNRLYGVPPRPHWATTYYGGHDIRLVLQRFGSNI 437

Query: 61  --------------VLHNLSDSLLALHTPNGSHCLDILRANETDPQWLVEQRETEVNIIK 86
                         VLHN+SDSLLA++T NGSHCLDIL+A+ETDP+WLV QR+TEV IIK
Sbjct: 438 IFSNGLKDPYSIAGVLHNISDSLLAVYTTNGSHCLDILKAHETDPEWLVRQRKTEVGIIK 497

BLAST of CmoCh04G020130 vs. TrEMBL
Match: A0A0L9UTA2_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g112300 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 6.9e-21
Identity = 49/85 (57.65%), Postives = 64/85 (75.29%), Query Frame = 1

Query: 1   MVMPLSTGNDTMFPAYNFELGSFIDYCNEVLHNLSDSLLALHTPNGSHCLDILRANETDP 60
           MV+P+  GNDTMF    F L         VL N+SDS++A+HT NGSHCLD+LRAN++DP
Sbjct: 331 MVIPIGIGNDTMFEPNPFNL-------KRVLENISDSIVAVHTVNGSHCLDLLRANQSDP 390

Query: 61  QWLVEQRETEVNIIKGWISKYYADL 86
           +WLV+QR+ E+ IIK WI++YYADL
Sbjct: 391 EWLVKQRKEEMKIIKRWIAQYYADL 408

BLAST of CmoCh04G020130 vs. TrEMBL
Match: B9SCN3_RICCO (Lysosomal Pro-X carboxypeptidase, putative OS=Ricinus communis GN=RCOM_0476300 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.6e-20
Identity = 57/131 (43.51%), Postives = 70/131 (53.44%), Query Frame = 1

Query: 1   MVMPLSTGNDTMFPAYNFELGSFIDYCNE------------------------------- 60
           MV+P+  GNDTMFP   F+L  ++  CN                                
Sbjct: 365 MVIPIGRGNDTMFPPSPFDLNGYVQDCNAIYGVRPRPHWVTTYYGGHSIKLILQRFGSNI 424

Query: 61  --------------VLHNLSDSLLALHTPNGSHCLDILRANET-DPQWLVEQRETEVNII 86
                         VL ++SD++LA+HT NGSHCLDIL ANET DP+WLV QR+TE+NII
Sbjct: 425 IFSNGIRDPYSSGGVLEDISDTILAVHTANGSHCLDILIANETTDPEWLVAQRKTEINII 484

BLAST of CmoCh04G020130 vs. TAIR10
Match: AT5G22860.1 (AT5G22860.1 Serine carboxypeptidase S28 family protein)

HSP 1 Score: 73.9 bits (180), Expect = 5.6e-14
Identity = 45/135 (33.33%), Postives = 59/135 (43.70%), Query Frame = 1

Query: 1   MVMPLSTGN-DTMFPAYNFELGSFIDYCNE------------------------------ 60
           +VMP+     DTMFP   F + S+ID C                                
Sbjct: 365 IVMPVGYDKQDTMFPTAPFNMTSYIDGCKSYHGVTPRPHWITTYFGIQEVKLILQKFGSN 424

Query: 61  ---------------VLHNLSDSLLALHTPNGSHCLDILRANETDPQWLVEQRETEVNII 90
                          VL ++SD+L+A+ T NGSHCLDI   ++ DP+WLV QRE E+ +I
Sbjct: 425 IIFSNGLSDPYSVGGVLEDISDTLVAITTKNGSHCLDITLKSKEDPEWLVIQREKEIKVI 484

BLAST of CmoCh04G020130 vs. TAIR10
Match: AT2G24280.1 (AT2G24280.1 alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 67.4 bits (163), Expect = 5.2e-12
Identity = 41/130 (31.54%), Postives = 55/130 (42.31%), Query Frame = 1

Query: 1   MVMPLSTGNDTMFPAYNFELGSFIDYC--------------------------------- 60
           MVMP+S  N +M P Y  +  +F + C                                 
Sbjct: 361 MVMPMSCSNQSMLPPYENDSEAFQEQCMTRYGVKPRPHWITTEFGGMRIETVLKRFGSNI 420

Query: 61  ------------NEVLHNLSDSLLALHTPNGSHCLDILRANETDPQWLVEQRETEVNIIK 86
                         VL N+S S++AL T  G+H  D+  A + DP+WL EQR  EV II+
Sbjct: 421 IFSNGMQDPWSRGGVLKNISSSIVALVTKKGAHHADLRAATKDDPEWLKEQRRQEVAIIE 480

BLAST of CmoCh04G020130 vs. TAIR10
Match: AT5G65760.1 (AT5G65760.1 Serine carboxypeptidase S28 family protein)

HSP 1 Score: 67.4 bits (163), Expect = 5.2e-12
Identity = 39/127 (30.71%), Postives = 56/127 (44.09%), Query Frame = 1

Query: 1   MVMPLSTGND-TMFPAYNFELGSFIDYC-------------------------------- 60
           MVMP+S+  + +MFP Y F   S+ + C                                
Sbjct: 374 MVMPMSSNQENSMFPGYGFNYSSYKEECWNTFRVNPRPKWVTTEFGGHDIATTLKSFGSN 433

Query: 61  -------------NEVLHNLSDSLLALHTPNGSHCLDILRANETDPQWLVEQRETEVNII 82
                          VL NLSD+++AL T  G+H LD+  +   DP+WLV+QRE E+ +I
Sbjct: 434 IIFSNGLLDPWSGGSVLKNLSDTIVALVTKEGAHHLDLRPSTPEDPKWLVDQREAEIRLI 493

BLAST of CmoCh04G020130 vs. NCBI nr
Match: gi|449456064|ref|XP_004145770.1| (PREDICTED: lysosomal Pro-X carboxypeptidase [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 3.7e-28
Identity = 71/136 (52.21%), Postives = 77/136 (56.62%), Query Frame = 1

Query: 1   MVMPLSTGNDTMFPAYNFELGSFIDYCNE------------------------------- 60
           MVMPLST NDTMFP   F+L SF+DYC +                               
Sbjct: 363 MVMPLSTTNDTMFPPITFDLKSFVDYCYQLYGVSSRPHWVTTYYGGNDIKLILQRFGSNI 422

Query: 61  --------------VLHNLSDSLLALHTPNGSHCLDILRANETDPQWLVEQRETEVNIIK 92
                         VL NLSDSLLA+HTP GSHCLDILRANETDPQWLV+QRETEV II+
Sbjct: 423 IFSNGLRDPYSSGGVLQNLSDSLLAVHTPKGSHCLDILRANETDPQWLVKQRETEVRIIE 482

BLAST of CmoCh04G020130 vs. NCBI nr
Match: gi|659117555|ref|XP_008458663.1| (PREDICTED: lysosomal Pro-X carboxypeptidase isoform X1 [Cucumis melo])

HSP 1 Score: 129.4 bits (324), Expect = 3.2e-27
Identity = 70/136 (51.47%), Postives = 77/136 (56.62%), Query Frame = 1

Query: 1   MVMPLSTGNDTMFPAYNFELGSFIDYCNE------------------------------- 60
           MVMP+ST NDTMFP   F+L SFIDYC +                               
Sbjct: 363 MVMPMSTSNDTMFPPITFDLRSFIDYCYQLYGVSPRPHWVTTYYGGNDIKLILQRFGSNI 422

Query: 61  --------------VLHNLSDSLLALHTPNGSHCLDILRANETDPQWLVEQRETEVNIIK 92
                         VL NLSDSLLA+HT NGSHCLDILRANETDPQWLVEQRE EV+II+
Sbjct: 423 IFSNGLRDPYSSGGVLQNLSDSLLAVHTLNGSHCLDILRANETDPQWLVEQREKEVSIIE 482

BLAST of CmoCh04G020130 vs. NCBI nr
Match: gi|449456174|ref|XP_004145825.1| (PREDICTED: lysosomal Pro-X carboxypeptidase-like [Cucumis sativus])

HSP 1 Score: 114.8 bits (286), Expect = 8.1e-23
Identity = 61/132 (46.21%), Postives = 72/132 (54.55%), Query Frame = 1

Query: 1   MVMPLSTGNDTMFPAYNFELGSFIDYCNE------------------------------- 60
           MVMP+STGNDTMFP+  F+  SF  YCN+                               
Sbjct: 357 MVMPISTGNDTMFPSETFDHESFSIYCNQLYGVTPRPHWVTTYYGGHDIHLILHRFASNI 416

Query: 61  --------------VLHNLSDSLLALHTPNGSHCLDILRANETDPQWLVEQRETEVNIIK 88
                         VLHN+SDSLLA++T NGSHCLDIL AN  DP+WLV QR+TEV IIK
Sbjct: 417 IFSNGLKDPYSIGGVLHNISDSLLAVYTANGSHCLDILTANRMDPEWLVTQRKTEVGIIK 476

BLAST of CmoCh04G020130 vs. NCBI nr
Match: gi|659117561|ref|XP_008458666.1| (PREDICTED: lysosomal Pro-X carboxypeptidase-like isoform X2 [Cucumis melo])

HSP 1 Score: 114.8 bits (286), Expect = 8.1e-23
Identity = 62/130 (47.69%), Postives = 75/130 (57.69%), Query Frame = 1

Query: 1   MVMPLSTGNDTMFPAYNFELGSFIDYCNE------------------------------- 60
           MVMP+S+ +D MFP Y F+L S I+YCN                                
Sbjct: 232 MVMPISSDDD-MFPPYPFDLQSVINYCNRLYGVPPRPHWATTYYGGHDIRLVLQRFGSNI 291

Query: 61  --------------VLHNLSDSLLALHTPNGSHCLDILRANETDPQWLVEQRETEVNIIK 86
                         VLH++SDSLLA+HT NGSHCLDIL+A+ETDP+WLV QR+TEV IIK
Sbjct: 292 IFSNGLKDPYSIAGVLHSISDSLLAVHTTNGSHCLDILKAHETDPEWLVTQRKTEVGIIK 351

BLAST of CmoCh04G020130 vs. NCBI nr
Match: gi|659117559|ref|XP_008458665.1| (PREDICTED: lysosomal Pro-X carboxypeptidase-like isoform X1 [Cucumis melo])

HSP 1 Score: 114.8 bits (286), Expect = 8.1e-23
Identity = 62/130 (47.69%), Postives = 75/130 (57.69%), Query Frame = 1

Query: 1   MVMPLSTGNDTMFPAYNFELGSFIDYCNE------------------------------- 60
           MVMP+S+ +D MFP Y F+L S I+YCN                                
Sbjct: 378 MVMPISSDDD-MFPPYPFDLQSVINYCNRLYGVPPRPHWATTYYGGHDIRLVLQRFGSNI 437

Query: 61  --------------VLHNLSDSLLALHTPNGSHCLDILRANETDPQWLVEQRETEVNIIK 86
                         VLH++SDSLLA+HT NGSHCLDIL+A+ETDP+WLV QR+TEV IIK
Sbjct: 438 IFSNGLKDPYSIAGVLHSISDSLLAVHTTNGSHCLDILKAHETDPEWLVTQRKTEVGIIK 497

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PCP_BOVIN8.9e-0640.00Lysosomal Pro-X carboxypeptidase OS=Bos taurus GN=PRCP PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KAY8_CUCSA2.6e-2852.21Uncharacterized protein OS=Cucumis sativus GN=Csa_6G149410 PE=4 SV=1[more]
A0A0A0KDH5_CUCSA5.6e-2346.21Uncharacterized protein OS=Cucumis sativus GN=Csa_6G149400 PE=4 SV=1[more]
A0A0A0KBK9_CUCSA1.8e-2146.15Uncharacterized protein OS=Cucumis sativus GN=Csa_6G149390 PE=4 SV=1[more]
A0A0L9UTA2_PHAAN6.9e-2157.65Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g112300 PE=4 SV=1[more]
B9SCN3_RICCO2.6e-2043.51Lysosomal Pro-X carboxypeptidase, putative OS=Ricinus communis GN=RCOM_0476300 P... [more]
Match NameE-valueIdentityDescription
AT5G22860.15.6e-1433.33 Serine carboxypeptidase S28 family protein[more]
AT2G24280.15.2e-1231.54 alpha/beta-Hydrolases superfamily protein[more]
AT5G65760.15.2e-1230.71 Serine carboxypeptidase S28 family protein[more]
Match NameE-valueIdentityDescription
gi|449456064|ref|XP_004145770.1|3.7e-2852.21PREDICTED: lysosomal Pro-X carboxypeptidase [Cucumis sativus][more]
gi|659117555|ref|XP_008458663.1|3.2e-2751.47PREDICTED: lysosomal Pro-X carboxypeptidase isoform X1 [Cucumis melo][more]
gi|449456174|ref|XP_004145825.1|8.1e-2346.21PREDICTED: lysosomal Pro-X carboxypeptidase-like [Cucumis sativus][more]
gi|659117561|ref|XP_008458666.1|8.1e-2347.69PREDICTED: lysosomal Pro-X carboxypeptidase-like isoform X2 [Cucumis melo][more]
gi|659117559|ref|XP_008458665.1|8.1e-2347.69PREDICTED: lysosomal Pro-X carboxypeptidase-like isoform X1 [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G020130.1CmoCh04G020130.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11010PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATEDcoord: 29..85
score: 1.5
NoneNo IPR availablePANTHERPTHR11010:SF43SUBFAMILY NOT NAMEDcoord: 29..85
score: 1.5

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None