CmoCh04G020120 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAGCAAATGACCACATATCTGCTGGATTAGAATATTTTGATCCAAGAATAACCTCGGTACTCCTATACTGCCGTGTTTGAATATCATTAGTACATTGCTTGTAGATAAGAGAAACTTCGAGAATGGACAACTAGTGTCAAATTACTGCCATGTAAATTGCTACGAGTGTCTCATCAATGCCACTCCAATCATCATTGGCATGTAACATGAAATGTCTAATGTCTAGCAACATCCTTAATGCTAATTACATTATTAGGAAACTAAATTTTTCTGAATTACCGAGGTATGAGAAATAGTGATCAATTTCATATGCGATTGTATATCCTCAATCCAAAAGTTATCTGATCACTGATTACTGTGTCTTAATTTGGTTAAACTAAACATAGAGCTTAACAAACCTTCGTACTAACGTCTTTTTCTACATTAATGTTAACACTGATGGACATTGTTCGTTTTCCTCGTTGAACTTGAATTTATTACCAGTTATAGTCAAGAAAACACAAATCTGATCACTGGGCATTGCGGCTAAGGGTCGTTAACTTTAACCAAGAAGTCATAGGTCCAAAACTTGCTACCTGCTTGGAAGATTAACCTTCTTTGATTGGGATCTTTCAAATGTTGTGAAGTTGAATAATAGTAAGCTACTTTGAAGTTTGTGAAAGTGTAAAAGGATTGGGATCTTTCAAATGTTGTGAAGTTGAATAATAGTATGCTACTTTGAAGTTTGTGAAAGTGTAAAAGGTCACGACTTCGGGTACTACAAAAATTTCGAGGAAGAAAAACTCCCTAATTCACTTGATTTAGAATGAGAGTCGTGTATTATTTCCTTCAGTGTCAACCTTGAATTTTTGCCGGTTGTTTTTCACTCAAGCTCATTGGCAACTTGACCTGCTTGTCCACTTTGTAATGCTGGCCTATCCCTTTTGATAATACTAATGATATTTTGACTTTCTTTGAATTAGGGAAGGATTCTTCTCCCGATAGGATAATTCTGTTCAAGATCAAGCAAGTAGCGGGCATTCTGACACCACATACAATAGTGATGATGGTTATTCTCTAACTGACCTAAATCGTACAAGGAGTTTTGAGGTCCTAGATGATCTTCCTGGACGTTCTGGGCCAATTAACGTGGAAAGTCATAACGCAAGCTCTTATAGCATTGGTCTAACTCAAGTCAGATCTAATTAAGAAAGAATTAGTGCTCAAGGTAGGGAAGCATCTATTGATGCGCTAGAAAATACACAAGAATAGGTTGAAGAAAATTGTGTAGCCAGCCAAACAGCTGATATCAACTCAATGGAGATGAGAGAAGATTCAGGACAACGTATGAGAAGAATTTTACAAGAAATTGCTGCAAAAAATTTATACCTTGAAGTTCCTCAGATTGATGCCGAGGATCATACTAGCATACCAGATGTCGAATCTTCCATTCAACAAATTGATACCCGCGAGGAATATGATGATATTGGAGTATTATCAGATAATTCTAGAAGTTTTCAAGACAATGATCTTGAAAATGTAGATCCGCTGGAATCTACTTCTCACGAGGAACTGAATGAAGATCTAGGTATGGGAGTTGAGCCAAATGATTGGCAAGCATATGGTTTTCAACGGGATGAATGGAAAAATAGCATTGAAGAAGATATAAACGAAACTCGGTTGGAAAGCATCACACTACTAATTGGTCTGGAGAATTCTCGAGTACGACACACAGAGGAGATATTCATCTGTAAAATGCCCCTGGAGCTTCACATGAAAATGTTATCATTGTGGAGGATGTGCCTAATTGGTTAGAGGGCTCTCCTAGTCGGGAGGCTACATCCAGCCGAAGGTTGGAGACCTTTTATTTTCGTGAAGAAAATAATGTGCATAATGTGGAAATGAGAGAACTTTTAAATACGTATCAAAAAATTTATATAACAACATGCCTGGCGGAATTCAGACTAAATGGTGAATTTACATGTGGACTATTTTTCTTTATTACGCAGGAGAAGTGTCTCTACTCTTCTTAGTAGTGGTTTCTGAGAAAGTCTTGACCAGTTAATTCGATCTTACATAGACAGGCGAGGTCACAGTACCAGTAATGGGGATCTAGACGAGACGATGTCCCCTTACACGTCTGTAAAACAAGAGCAAGAGCACGACAGGCAGACTGCAGGTCAAACGGGTTCTGCTGCGAGCCATCCACTTGCTTTGCCTCTGCCACCTGCAATGCCCCCTCGGCAACTTTGGGAACATGAATTGAGTCATGATAGTTTGTCAAGACGTGATTTCCATCAGCAGTTTGGAGCTGTATGTCTCATCATTGTTCCCTTGTTTGTTGTCTTTTCTGTTTGGATGAAATCAGTTGGATTAAAGTAAATAAAAGAGATAGGAAAACGTGCAAGTATCAATGGTAAACGATTGATGAATTGTGATTCTATAATTCAAATTTAGAATTATTGCAATTGTCTATTAGGCGAAGTCCAGTGTTGGTTGTTGGATAATCTGGTCATCTTTTTTTCGTTCTTTATTTTATTGTTATTACTATTCTTTTAAATTTGATGTTGTTGCTGAATTTTACAGGACTGGGAGATCATTAATGATTTGAGGATCGACATGTCTAGGCTACAGCAGAGGATGAGCAACCTACAGAGAATGTTGGAGACATGCATGGACATGCGACTTGAGCTGCAGCGCTCAATTAAGCAAGAAGTTTCTTCTGCACTGAACCGAACAGCTGGTTCAGAAGGTATGCCTTCATTCTCAATGTAGCTGAATTCTTTAGTTTTAGATTTGATCAATTAACAAGCTGCCTGGGGAACCCACCCCACCCCCTAGAAAAAGATACAACATGGTACTTGATTTGCAGAGGTGCATACCTTAATCTAAGTGATTTCATGAGTAATTTAAGTAGTTTTTGTGCTTCTTGGTTGTGGATATTATATTTTTCCAAAATTCGACATGGACTTTTTATTTTTTTTTAATGTGGTTCCTGCCCTGTACCACCGAAATATATCATACTTTACTCAAATGGTTATTCAGCATGGGTGGAGGGAGGGAAGACAGTTTGCCAGACGAAGAACCCAAATGAGACCGAGTAAGGAAAGGAATTTGTTGTACATGTTGTGATAACCATATTGATGCTTTGTTGTATAGGTAATTCTAGCAAATTATCAGACCATTTTTGTGTGCTTTTCTCTAGTTCCAAGTTTCATTTAACTTATATTTTCTCCTTTTGGCACATGTGCACATGTTCAAAATGTGCTAACGAGTTGGTCGAAGCAAGAGAAAAGTGTCCGACATGTCATGCGCCTATTCTAGAAGTGATTCGTGCTTACTCTTTATGA ATGCAAGCAAATGACCACATATCTGCTGGATTAGAATATTTTGATCCAAGAATAACCTCGGATAATTCTGTTCAAGATCAAGCAAGTAGCGGGCATTCTGACACCACATACAATAGTGATGATGGTTATTCTCTAACTGACCTAAATCGTACAAGGAGTTTTGAGGTCCTAGATGATCTTCCTGGACGTTCTGGGCCAATTAACGTGGAAAGTCATAACGCAAGCTCTTATAGCATTGGTCTAACTCAAGTTGAAGAAAATTGTGTAGCCAGCCAAACAGCTGATATCAACTCAATGGAGATGAGAGAAGATTCAGGACAACGTATGAGAAGAATTTTACAAGAAATTGCTGCAAAAAATTTATACCTTGAAGTTCCTCAGATTGATGCCGAGGATCATACTAGCATACCAGATGTCGAATCTTCCATTCAACAAATTGATACCCGCGAGGAATATGATGATATTGGAGTATTATCAGATAATTCTAGAAGTTTTCAAGACAATGATCTTGAAAATGTAGATCCGCTGGAATCTACTTCTCACGAGGAACTGAATGAAGATCTAGGTATGGGAGTTGAGCCAAATGATTGGCAAGCATATGGTTTTCAACGGGATGAATGGAAAAATAGCATTGAAGAAGATATAAACGAAACTCGGTTGGAAAGCATCACACTACTAATTGGTCTGGAGAATTCTCGAGTACGACACACAGAGGAGATATTCATCTGTAAAATGCCCCTGGAGCTTCACATGAAAATGTTATCATTGTGGAGGATGTGCCTAATTGGAGAAGTGTCTCTACTCTTCTTAGTAGTGGTTTCTGAGAAAGTCTTGACCAACAGGCGAGGTCACAGTACCAGTAATGGGGATCTAGACGAGACGATGTCCCCTTACACGTCTGTAAAACAAGAGCAAGAGCACGACAGGCAGACTGCAGGTCAAACGGGTTCTGCTGCGAGCCATCCACTTGCTTTGCCTCTGCCACCTGCAATGCCCCCTCGGCAACTTTGGGAACATGAATTGAGTCATGATAGTTTGTCAAGACGTGATTTCCATCAGCAGTTTGGAGCTGACTGGGAGATCATTAATGATTTGAGGATCGACATGTCTAGGCTACAGCAGAGGATGAGCAACCTACAGAGAATGTTGGAGACATGCATGGACATGCGACTTGAGCTGCAGCGCTCAATTAAGCAAGAAGTTTCTTCTGCACTGAACCGAACAGCTGGTTCAGAAGCATGGGTGGAGGGAGGGAAGACAGTTTGCCAGACGAAGAACCCAAATGAGACCGATTCCAAGTTTCATTTAACTTATATTTTCTCCTTTTGGCACATGTGCACATGTTCAAAATGTGCTAACGAGTTGGTCGAAGCAAGAGAAAAGTGTCCGACATGTCATGCGCCTATTCTAGAAGTGATTCGTGCTTACTCTTTATGA ATGCAAGCAAATGACCACATATCTGCTGGATTAGAATATTTTGATCCAAGAATAACCTCGGATAATTCTGTTCAAGATCAAGCAAGTAGCGGGCATTCTGACACCACATACAATAGTGATGATGGTTATTCTCTAACTGACCTAAATCGTACAAGGAGTTTTGAGGTCCTAGATGATCTTCCTGGACGTTCTGGGCCAATTAACGTGGAAAGTCATAACGCAAGCTCTTATAGCATTGGTCTAACTCAAGTTGAAGAAAATTGTGTAGCCAGCCAAACAGCTGATATCAACTCAATGGAGATGAGAGAAGATTCAGGACAACGTATGAGAAGAATTTTACAAGAAATTGCTGCAAAAAATTTATACCTTGAAGTTCCTCAGATTGATGCCGAGGATCATACTAGCATACCAGATGTCGAATCTTCCATTCAACAAATTGATACCCGCGAGGAATATGATGATATTGGAGTATTATCAGATAATTCTAGAAGTTTTCAAGACAATGATCTTGAAAATGTAGATCCGCTGGAATCTACTTCTCACGAGGAACTGAATGAAGATCTAGGTATGGGAGTTGAGCCAAATGATTGGCAAGCATATGGTTTTCAACGGGATGAATGGAAAAATAGCATTGAAGAAGATATAAACGAAACTCGGTTGGAAAGCATCACACTACTAATTGGTCTGGAGAATTCTCGAGTACGACACACAGAGGAGATATTCATCTGTAAAATGCCCCTGGAGCTTCACATGAAAATGTTATCATTGTGGAGGATGTGCCTAATTGGAGAAGTGTCTCTACTCTTCTTAGTAGTGGTTTCTGAGAAAGTCTTGACCAACAGGCGAGGTCACAGTACCAGTAATGGGGATCTAGACGAGACGATGTCCCCTTACACGTCTGTAAAACAAGAGCAAGAGCACGACAGGCAGACTGCAGGTCAAACGGGTTCTGCTGCGAGCCATCCACTTGCTTTGCCTCTGCCACCTGCAATGCCCCCTCGGCAACTTTGGGAACATGAATTGAGTCATGATAGTTTGTCAAGACGTGATTTCCATCAGCAGTTTGGAGCTGACTGGGAGATCATTAATGATTTGAGGATCGACATGTCTAGGCTACAGCAGAGGATGAGCAACCTACAGAGAATGTTGGAGACATGCATGGACATGCGACTTGAGCTGCAGCGCTCAATTAAGCAAGAAGTTTCTTCTGCACTGAACCGAACAGCTGGTTCAGAAGCATGGGTGGAGGGAGGGAAGACAGTTTGCCAGACGAAGAACCCAAATGAGACCGATTCCAAGTTTCATTTAACTTATATTTTCTCCTTTTGGCACATGTGCACATGTTCAAAATGTGCTAACGAGTTGGTCGAAGCAAGAGAAAAGTGTCCGACATGTCATGCGCCTATTCTAGAAGTGATTCGTGCTTACTCTTTATGA
BLAST of CmoCh04G020120 vs. TrEMBL
Match: A0A0A0KDG6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G149350 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 3.9e-123 Identity = 288/554 (51.99%), Postives = 331/554 (59.75%), Query Frame = 1
BLAST of CmoCh04G020120 vs. TrEMBL
Match: B9SCM1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0475470 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 1.3e-46 Identity = 108/212 (50.94%), Postives = 137/212 (64.62%), Query Frame = 1
BLAST of CmoCh04G020120 vs. TrEMBL
Match: V4SFT9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027818mg PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 8.0e-44 Identity = 105/213 (49.30%), Postives = 135/213 (63.38%), Query Frame = 1
BLAST of CmoCh04G020120 vs. TrEMBL
Match: A0A061GW37_THECC (Ring/U-Box superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_041566 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.8e-43 Identity = 102/212 (48.11%), Postives = 134/212 (63.21%), Query Frame = 1
BLAST of CmoCh04G020120 vs. TrEMBL
Match: A0A061GWA6_THECC (Ring/U-Box superfamily protein, putative isoform 3 OS=Theobroma cacao GN=TCM_041566 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.8e-43 Identity = 102/212 (48.11%), Postives = 134/212 (63.21%), Query Frame = 1
BLAST of CmoCh04G020120 vs. TAIR10
Match: AT5G04460.1 (AT5G04460.1 RING/U-box superfamily protein) HSP 1 Score: 161.4 bits (407), Expect = 1.4e-39 Identity = 93/212 (43.87%), Postives = 122/212 (57.55%), Query Frame = 1
BLAST of CmoCh04G020120 vs. TAIR10
Match: AT2G27950.1 (AT2G27950.1 Ring/U-Box superfamily protein) HSP 1 Score: 161.0 bits (406), Expect = 1.8e-39 Identity = 97/213 (45.54%), Postives = 129/213 (60.56%), Query Frame = 1
BLAST of CmoCh04G020120 vs. TAIR10
Match: AT2G34920.1 (AT2G34920.1 RING/U-box superfamily protein) HSP 1 Score: 60.8 bits (146), Expect = 2.6e-09 Identity = 40/107 (37.38%), Postives = 55/107 (51.40%), Query Frame = 1
BLAST of CmoCh04G020120 vs. TAIR10
Match: AT1G30860.1 (AT1G30860.1 RING/U-box superfamily protein) HSP 1 Score: 55.1 bits (131), Expect = 1.4e-07 Identity = 49/187 (26.20%), Postives = 75/187 (40.11%), Query Frame = 1
BLAST of CmoCh04G020120 vs. NCBI nr
Match: gi|449456168|ref|XP_004145822.1| (PREDICTED: uncharacterized protein LOC101214410 isoform X2 [Cucumis sativus]) HSP 1 Score: 449.9 bits (1156), Expect = 5.6e-123 Identity = 288/554 (51.99%), Postives = 331/554 (59.75%), Query Frame = 1
BLAST of CmoCh04G020120 vs. NCBI nr
Match: gi|778713418|ref|XP_011657046.1| (PREDICTED: uncharacterized protein LOC101214410 isoform X1 [Cucumis sativus]) HSP 1 Score: 449.5 bits (1155), Expect = 7.3e-123 Identity = 288/555 (51.89%), Postives = 331/555 (59.64%), Query Frame = 1
BLAST of CmoCh04G020120 vs. NCBI nr
Match: gi|659130940|ref|XP_008465430.1| (PREDICTED: uncharacterized protein LOC103503044 isoform X2 [Cucumis melo]) HSP 1 Score: 266.5 bits (680), Expect = 8.7e-68 Identity = 143/212 (67.45%), Postives = 157/212 (74.06%), Query Frame = 1
BLAST of CmoCh04G020120 vs. NCBI nr
Match: gi|659130942|ref|XP_008465431.1| (PREDICTED: probable GPI-anchored adhesin-like protein PGA55 isoform X3 [Cucumis melo]) HSP 1 Score: 266.5 bits (680), Expect = 8.7e-68 Identity = 143/212 (67.45%), Postives = 157/212 (74.06%), Query Frame = 1
BLAST of CmoCh04G020120 vs. NCBI nr
Match: gi|659130938|ref|XP_008465429.1| (PREDICTED: uncharacterized protein LOC103503044 isoform X1 [Cucumis melo]) HSP 1 Score: 266.5 bits (680), Expect = 8.7e-68 Identity = 143/212 (67.45%), Postives = 157/212 (74.06%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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