CmoCh04G020120 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G020120
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(Protein neuralized) (RING/U-box protein)
LocationCmo_Chr04 : 10734477 .. 10737809 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGCAAATGACCACATATCTGCTGGATTAGAATATTTTGATCCAAGAATAACCTCGGTACTCCTATACTGCCGTGTTTGAATATCATTAGTACATTGCTTGTAGATAAGAGAAACTTCGAGAATGGACAACTAGTGTCAAATTACTGCCATGTAAATTGCTACGAGTGTCTCATCAATGCCACTCCAATCATCATTGGCATGTAACATGAAATGTCTAATGTCTAGCAACATCCTTAATGCTAATTACATTATTAGGAAACTAAATTTTTCTGAATTACCGAGGTATGAGAAATAGTGATCAATTTCATATGCGATTGTATATCCTCAATCCAAAAGTTATCTGATCACTGATTACTGTGTCTTAATTTGGTTAAACTAAACATAGAGCTTAACAAACCTTCGTACTAACGTCTTTTTCTACATTAATGTTAACACTGATGGACATTGTTCGTTTTCCTCGTTGAACTTGAATTTATTACCAGTTATAGTCAAGAAAACACAAATCTGATCACTGGGCATTGCGGCTAAGGGTCGTTAACTTTAACCAAGAAGTCATAGGTCCAAAACTTGCTACCTGCTTGGAAGATTAACCTTCTTTGATTGGGATCTTTCAAATGTTGTGAAGTTGAATAATAGTAAGCTACTTTGAAGTTTGTGAAAGTGTAAAAGGATTGGGATCTTTCAAATGTTGTGAAGTTGAATAATAGTATGCTACTTTGAAGTTTGTGAAAGTGTAAAAGGTCACGACTTCGGGTACTACAAAAATTTCGAGGAAGAAAAACTCCCTAATTCACTTGATTTAGAATGAGAGTCGTGTATTATTTCCTTCAGTGTCAACCTTGAATTTTTGCCGGTTGTTTTTCACTCAAGCTCATTGGCAACTTGACCTGCTTGTCCACTTTGTAATGCTGGCCTATCCCTTTTGATAATACTAATGATATTTTGACTTTCTTTGAATTAGGGAAGGATTCTTCTCCCGATAGGATAATTCTGTTCAAGATCAAGCAAGTAGCGGGCATTCTGACACCACATACAATAGTGATGATGGTTATTCTCTAACTGACCTAAATCGTACAAGGAGTTTTGAGGTCCTAGATGATCTTCCTGGACGTTCTGGGCCAATTAACGTGGAAAGTCATAACGCAAGCTCTTATAGCATTGGTCTAACTCAAGTCAGATCTAATTAAGAAAGAATTAGTGCTCAAGGTAGGGAAGCATCTATTGATGCGCTAGAAAATACACAAGAATAGGTTGAAGAAAATTGTGTAGCCAGCCAAACAGCTGATATCAACTCAATGGAGATGAGAGAAGATTCAGGACAACGTATGAGAAGAATTTTACAAGAAATTGCTGCAAAAAATTTATACCTTGAAGTTCCTCAGATTGATGCCGAGGATCATACTAGCATACCAGATGTCGAATCTTCCATTCAACAAATTGATACCCGCGAGGAATATGATGATATTGGAGTATTATCAGATAATTCTAGAAGTTTTCAAGACAATGATCTTGAAAATGTAGATCCGCTGGAATCTACTTCTCACGAGGAACTGAATGAAGATCTAGGTATGGGAGTTGAGCCAAATGATTGGCAAGCATATGGTTTTCAACGGGATGAATGGAAAAATAGCATTGAAGAAGATATAAACGAAACTCGGTTGGAAAGCATCACACTACTAATTGGTCTGGAGAATTCTCGAGTACGACACACAGAGGAGATATTCATCTGTAAAATGCCCCTGGAGCTTCACATGAAAATGTTATCATTGTGGAGGATGTGCCTAATTGGTTAGAGGGCTCTCCTAGTCGGGAGGCTACATCCAGCCGAAGGTTGGAGACCTTTTATTTTCGTGAAGAAAATAATGTGCATAATGTGGAAATGAGAGAACTTTTAAATACGTATCAAAAAATTTATATAACAACATGCCTGGCGGAATTCAGACTAAATGGTGAATTTACATGTGGACTATTTTTCTTTATTACGCAGGAGAAGTGTCTCTACTCTTCTTAGTAGTGGTTTCTGAGAAAGTCTTGACCAGTTAATTCGATCTTACATAGACAGGCGAGGTCACAGTACCAGTAATGGGGATCTAGACGAGACGATGTCCCCTTACACGTCTGTAAAACAAGAGCAAGAGCACGACAGGCAGACTGCAGGTCAAACGGGTTCTGCTGCGAGCCATCCACTTGCTTTGCCTCTGCCACCTGCAATGCCCCCTCGGCAACTTTGGGAACATGAATTGAGTCATGATAGTTTGTCAAGACGTGATTTCCATCAGCAGTTTGGAGCTGTATGTCTCATCATTGTTCCCTTGTTTGTTGTCTTTTCTGTTTGGATGAAATCAGTTGGATTAAAGTAAATAAAAGAGATAGGAAAACGTGCAAGTATCAATGGTAAACGATTGATGAATTGTGATTCTATAATTCAAATTTAGAATTATTGCAATTGTCTATTAGGCGAAGTCCAGTGTTGGTTGTTGGATAATCTGGTCATCTTTTTTTCGTTCTTTATTTTATTGTTATTACTATTCTTTTAAATTTGATGTTGTTGCTGAATTTTACAGGACTGGGAGATCATTAATGATTTGAGGATCGACATGTCTAGGCTACAGCAGAGGATGAGCAACCTACAGAGAATGTTGGAGACATGCATGGACATGCGACTTGAGCTGCAGCGCTCAATTAAGCAAGAAGTTTCTTCTGCACTGAACCGAACAGCTGGTTCAGAAGGTATGCCTTCATTCTCAATGTAGCTGAATTCTTTAGTTTTAGATTTGATCAATTAACAAGCTGCCTGGGGAACCCACCCCACCCCCTAGAAAAAGATACAACATGGTACTTGATTTGCAGAGGTGCATACCTTAATCTAAGTGATTTCATGAGTAATTTAAGTAGTTTTTGTGCTTCTTGGTTGTGGATATTATATTTTTCCAAAATTCGACATGGACTTTTTATTTTTTTTTAATGTGGTTCCTGCCCTGTACCACCGAAATATATCATACTTTACTCAAATGGTTATTCAGCATGGGTGGAGGGAGGGAAGACAGTTTGCCAGACGAAGAACCCAAATGAGACCGAGTAAGGAAAGGAATTTGTTGTACATGTTGTGATAACCATATTGATGCTTTGTTGTATAGGTAATTCTAGCAAATTATCAGACCATTTTTGTGTGCTTTTCTCTAGTTCCAAGTTTCATTTAACTTATATTTTCTCCTTTTGGCACATGTGCACATGTTCAAAATGTGCTAACGAGTTGGTCGAAGCAAGAGAAAAGTGTCCGACATGTCATGCGCCTATTCTAGAAGTGATTCGTGCTTACTCTTTATGA

mRNA sequence

ATGCAAGCAAATGACCACATATCTGCTGGATTAGAATATTTTGATCCAAGAATAACCTCGGATAATTCTGTTCAAGATCAAGCAAGTAGCGGGCATTCTGACACCACATACAATAGTGATGATGGTTATTCTCTAACTGACCTAAATCGTACAAGGAGTTTTGAGGTCCTAGATGATCTTCCTGGACGTTCTGGGCCAATTAACGTGGAAAGTCATAACGCAAGCTCTTATAGCATTGGTCTAACTCAAGTTGAAGAAAATTGTGTAGCCAGCCAAACAGCTGATATCAACTCAATGGAGATGAGAGAAGATTCAGGACAACGTATGAGAAGAATTTTACAAGAAATTGCTGCAAAAAATTTATACCTTGAAGTTCCTCAGATTGATGCCGAGGATCATACTAGCATACCAGATGTCGAATCTTCCATTCAACAAATTGATACCCGCGAGGAATATGATGATATTGGAGTATTATCAGATAATTCTAGAAGTTTTCAAGACAATGATCTTGAAAATGTAGATCCGCTGGAATCTACTTCTCACGAGGAACTGAATGAAGATCTAGGTATGGGAGTTGAGCCAAATGATTGGCAAGCATATGGTTTTCAACGGGATGAATGGAAAAATAGCATTGAAGAAGATATAAACGAAACTCGGTTGGAAAGCATCACACTACTAATTGGTCTGGAGAATTCTCGAGTACGACACACAGAGGAGATATTCATCTGTAAAATGCCCCTGGAGCTTCACATGAAAATGTTATCATTGTGGAGGATGTGCCTAATTGGAGAAGTGTCTCTACTCTTCTTAGTAGTGGTTTCTGAGAAAGTCTTGACCAACAGGCGAGGTCACAGTACCAGTAATGGGGATCTAGACGAGACGATGTCCCCTTACACGTCTGTAAAACAAGAGCAAGAGCACGACAGGCAGACTGCAGGTCAAACGGGTTCTGCTGCGAGCCATCCACTTGCTTTGCCTCTGCCACCTGCAATGCCCCCTCGGCAACTTTGGGAACATGAATTGAGTCATGATAGTTTGTCAAGACGTGATTTCCATCAGCAGTTTGGAGCTGACTGGGAGATCATTAATGATTTGAGGATCGACATGTCTAGGCTACAGCAGAGGATGAGCAACCTACAGAGAATGTTGGAGACATGCATGGACATGCGACTTGAGCTGCAGCGCTCAATTAAGCAAGAAGTTTCTTCTGCACTGAACCGAACAGCTGGTTCAGAAGCATGGGTGGAGGGAGGGAAGACAGTTTGCCAGACGAAGAACCCAAATGAGACCGATTCCAAGTTTCATTTAACTTATATTTTCTCCTTTTGGCACATGTGCACATGTTCAAAATGTGCTAACGAGTTGGTCGAAGCAAGAGAAAAGTGTCCGACATGTCATGCGCCTATTCTAGAAGTGATTCGTGCTTACTCTTTATGA

Coding sequence (CDS)

ATGCAAGCAAATGACCACATATCTGCTGGATTAGAATATTTTGATCCAAGAATAACCTCGGATAATTCTGTTCAAGATCAAGCAAGTAGCGGGCATTCTGACACCACATACAATAGTGATGATGGTTATTCTCTAACTGACCTAAATCGTACAAGGAGTTTTGAGGTCCTAGATGATCTTCCTGGACGTTCTGGGCCAATTAACGTGGAAAGTCATAACGCAAGCTCTTATAGCATTGGTCTAACTCAAGTTGAAGAAAATTGTGTAGCCAGCCAAACAGCTGATATCAACTCAATGGAGATGAGAGAAGATTCAGGACAACGTATGAGAAGAATTTTACAAGAAATTGCTGCAAAAAATTTATACCTTGAAGTTCCTCAGATTGATGCCGAGGATCATACTAGCATACCAGATGTCGAATCTTCCATTCAACAAATTGATACCCGCGAGGAATATGATGATATTGGAGTATTATCAGATAATTCTAGAAGTTTTCAAGACAATGATCTTGAAAATGTAGATCCGCTGGAATCTACTTCTCACGAGGAACTGAATGAAGATCTAGGTATGGGAGTTGAGCCAAATGATTGGCAAGCATATGGTTTTCAACGGGATGAATGGAAAAATAGCATTGAAGAAGATATAAACGAAACTCGGTTGGAAAGCATCACACTACTAATTGGTCTGGAGAATTCTCGAGTACGACACACAGAGGAGATATTCATCTGTAAAATGCCCCTGGAGCTTCACATGAAAATGTTATCATTGTGGAGGATGTGCCTAATTGGAGAAGTGTCTCTACTCTTCTTAGTAGTGGTTTCTGAGAAAGTCTTGACCAACAGGCGAGGTCACAGTACCAGTAATGGGGATCTAGACGAGACGATGTCCCCTTACACGTCTGTAAAACAAGAGCAAGAGCACGACAGGCAGACTGCAGGTCAAACGGGTTCTGCTGCGAGCCATCCACTTGCTTTGCCTCTGCCACCTGCAATGCCCCCTCGGCAACTTTGGGAACATGAATTGAGTCATGATAGTTTGTCAAGACGTGATTTCCATCAGCAGTTTGGAGCTGACTGGGAGATCATTAATGATTTGAGGATCGACATGTCTAGGCTACAGCAGAGGATGAGCAACCTACAGAGAATGTTGGAGACATGCATGGACATGCGACTTGAGCTGCAGCGCTCAATTAAGCAAGAAGTTTCTTCTGCACTGAACCGAACAGCTGGTTCAGAAGCATGGGTGGAGGGAGGGAAGACAGTTTGCCAGACGAAGAACCCAAATGAGACCGATTCCAAGTTTCATTTAACTTATATTTTCTCCTTTTGGCACATGTGCACATGTTCAAAATGTGCTAACGAGTTGGTCGAAGCAAGAGAAAAGTGTCCGACATGTCATGCGCCTATTCTAGAAGTGATTCGTGCTTACTCTTTATGA
BLAST of CmoCh04G020120 vs. TrEMBL
Match: A0A0A0KDG6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G149350 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 3.9e-123
Identity = 288/554 (51.99%), Postives = 331/554 (59.75%), Query Frame = 1

Query: 6   HISAGL-EYFDPRITSDNSVQDQASSGHSDTTYNSDDGYSLTDLNRTRSFEVLDDLPGRS 65
           H  +GL E F  R+  D+SVQ QASS HSDTT NSDDG SLTDLNRT SFEVLDDL   S
Sbjct: 296 HTVSGLREGFFSRL--DSSVQSQASSRHSDTTSNSDDGDSLTDLNRTGSFEVLDDLREHS 355

Query: 66  GPINVESHNASSYSIGLT--------------------------QVEENCVASQTADINS 125
           G +NVESH  S  + GLT                          QV E+ +ASQT D NS
Sbjct: 356 GIVNVESHEGSHST-GLTEVRPDPEGSTSEAREEPVPVVESSEKQVAESGLASQTPDTNS 415

Query: 126 MEMREDSGQRMRRILQEIAAKNLYLEVPQIDAEDHTSIPDVESSIQQIDTREEYDDIGVL 185
            EMR+DSGQ MR ILQE A+  LY E+PQIDAEDHTS+ D E SIQQ +T +E    G +
Sbjct: 416 TEMRDDSGQGMRSILQETASNLLYREIPQIDAEDHTSVLDTEPSIQQDNTHDENVHDGSV 475

Query: 186 SDNSRSFQDNDLENVDPLESTSHEELNEDLGMGVEPNDWQAYGFQRDEWKNSI------- 245
            D+S  FQDNDLE+VDP ES +H+ELNEDLG  VEPND QA GFQ+DEW+NSI       
Sbjct: 476 FDHSERFQDNDLESVDPQESNTHDELNEDLGTVVEPNDRQASGFQQDEWENSIEEDINET 535

Query: 246 ---------EEDINETRLESITL--------------------LIGLENSRVRHTEEIFI 305
                     E+   T    I L                      GL N     +  +  
Sbjct: 536 HMESIGTNWSEEFLSTTYRDIHLQNAPEASHENAIFVEDVPNWFEGLPNREATSSRRLET 595

Query: 306 CKMPLELHMKMLSLWRMCLIGEVSLLFLVVVSEKV------LTNRRGHSTSNGDLDETMS 365
              P + +     +  +     VS L      E +         R+GH + N D+DE M 
Sbjct: 596 FYFPEDDNAHNGEIRELLSRRSVSTLLSSGFRESLDQLIQSYVERQGHGSGNRDMDEMMP 655

Query: 366 PYTSVKQEQEHDRQTAGQTGSAASHPLALPLPPAMPPRQLWEHELSHDSLSRRDFHQQFG 425
           PYTS +QEQEHDRQ+ GQ GS  SH LALPLPP +P R LW++ELS+ S SRRDF QQFG
Sbjct: 656 PYTSAEQEQEHDRQSEGQAGSVESHSLALPLPPTLPSRPLWDNELSNGSWSRRDFRQQFG 715

Query: 426 ADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMRLELQRSIKQEVSSALNRTAGSE---- 479
           ADWEIINDLRIDMSRLQQRMSNLQRMLETCMDM+LELQRSIKQEVSSALNR AGSE    
Sbjct: 716 ADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRAAGSEEMFE 775

BLAST of CmoCh04G020120 vs. TrEMBL
Match: B9SCM1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0475470 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.3e-46
Identity = 108/212 (50.94%), Postives = 137/212 (64.62%), Query Frame = 1

Query: 281 RRGHSTSNGDLDETMSPYTSVKQEQEHDR--QTAGQTGSAASHPLALPLPPAMPPRQLWE 340
           R+GH+  + +L+ T +   S +QE E     Q  GQ  S  S PLALP PP  P +QLW+
Sbjct: 39  RQGHAPLDWELEGTSATPASAEQEPEQQSRDQNEGQEDSVQSTPLALPSPPIPPVQQLWD 98

Query: 341 HELSHDSLSRRDFHQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMRLELQRSIK 400
            E  H    + D HQ+FG DW+IINDLRIDM+RLQQRM+N+QRMLE CMDM+LELQRSI+
Sbjct: 99  QESQHFIWPQHDMHQRFGIDWDIINDLRIDMARLQQRMTNMQRMLEACMDMQLELQRSIR 158

Query: 401 QEVSSALNRTAGSEAWVEGG------------KTVCQTKNPNETDSKFHLTYIFSFWHMC 460
           QEVS+AL R++GS    E G            K +C   + +  DS      ++   HMC
Sbjct: 159 QEVSAALIRSSGSAGISENGLPEDTSKWDHVRKGICCICSDSNIDS-----LLYRCGHMC 218

Query: 461 TCSKCANELVEAREKCPTCHAPILEVIRAYSL 479
           TCSKCANELV+  EKCP C AP++EVIRAYS+
Sbjct: 219 TCSKCANELVQKGEKCPMCKAPVIEVIRAYSI 245

BLAST of CmoCh04G020120 vs. TrEMBL
Match: V4SFT9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027818mg PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 8.0e-44
Identity = 105/213 (49.30%), Postives = 135/213 (63.38%), Query Frame = 1

Query: 280 NRRGHSTSNGDLDETMSPYTSVKQ--EQEHDRQTAGQTGSAASHPLALPLPPAMPPRQLW 339
           +R+ H+  + +L+ T S   S +Q  EQ++  Q   Q  +  S PLALP P   P + LW
Sbjct: 628 DRQSHAPVDWELNGTSSGAASAEQDLEQQNGDQNEDQRETIESPPLALPSPSLPPVQPLW 687

Query: 340 EHELSHDSLSRRDFHQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMRLELQRSI 399
           + E  HD+    D HQ+FG +W+IINDLRIDM+RLQQRM+N+QRMLE CMDM+LELQRSI
Sbjct: 688 DQESHHDNWQSHDMHQRFGIEWDIINDLRIDMARLQQRMNNMQRMLEACMDMQLELQRSI 747

Query: 400 KQEVSSALNRTAGSEA------------WVEGGKTVCQTKNPNETDSKFHLTYIFSFWHM 459
           +QEVS+ALNR AGS              W    K VC     +  DS      ++   HM
Sbjct: 748 RQEVSAALNRVAGSPGICEDSLSKDGSNWDYVRKGVCCICCDSNIDS-----LLYRCGHM 807

Query: 460 CTCSKCANELVEAREKCPTCHAPILEVIRAYSL 479
           CTCSKCANELV++  KCP C AP++EVIRAYS+
Sbjct: 808 CTCSKCANELVQSGGKCPMCQAPLVEVIRAYSI 835

BLAST of CmoCh04G020120 vs. TrEMBL
Match: A0A061GW37_THECC (Ring/U-Box superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_041566 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.8e-43
Identity = 102/212 (48.11%), Postives = 134/212 (63.21%), Query Frame = 1

Query: 281 RRGHSTSNGDLDETMSPYTSVKQ--EQEHDRQTAGQTGSAASHPLALPLPPAMPPRQLWE 340
           R+ H++ + +L ET     S++Q  EQ+   Q  GQ  +    PLALP P   P + LW+
Sbjct: 638 RQNHASIDWELHETSPTPASLEQDLEQQSRDQNEGQGDAVEGPPLALPSPRMPPTQPLWD 697

Query: 341 HELSHDSLSRRDFHQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMRLELQRSIK 400
            +  H + +  D HQ+FG +WEI+NDLRIDM+RLQQRM+N+QRMLE CMDM+LELQRSI+
Sbjct: 698 QDSHHYNWAPHDMHQRFGIEWEIVNDLRIDMARLQQRMNNMQRMLEACMDMQLELQRSIR 757

Query: 401 QEVSSALNRTAGSEA------------WVEGGKTVCQTKNPNETDSKFHLTYIFSFWHMC 460
           QEVS+ALNR+AGS+             W    K +C        DS      ++   HMC
Sbjct: 758 QEVSAALNRSAGSQGVIDDSLPKDAANWDNVRKGICCICCEGNIDS-----LLYRCGHMC 817

Query: 461 TCSKCANELVEAREKCPTCHAPILEVIRAYSL 479
           TCSKCANELV+   KCP C AP++EVIRAYS+
Sbjct: 818 TCSKCANELVQGGGKCPMCRAPVVEVIRAYSI 844

BLAST of CmoCh04G020120 vs. TrEMBL
Match: A0A061GWA6_THECC (Ring/U-Box superfamily protein, putative isoform 3 OS=Theobroma cacao GN=TCM_041566 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.8e-43
Identity = 102/212 (48.11%), Postives = 134/212 (63.21%), Query Frame = 1

Query: 281 RRGHSTSNGDLDETMSPYTSVKQ--EQEHDRQTAGQTGSAASHPLALPLPPAMPPRQLWE 340
           R+ H++ + +L ET     S++Q  EQ+   Q  GQ  +    PLALP P   P + LW+
Sbjct: 648 RQNHASIDWELHETSPTPASLEQDLEQQSRDQNEGQGDAVEGPPLALPSPRMPPTQPLWD 707

Query: 341 HELSHDSLSRRDFHQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMRLELQRSIK 400
            +  H + +  D HQ+FG +WEI+NDLRIDM+RLQQRM+N+QRMLE CMDM+LELQRSI+
Sbjct: 708 QDSHHYNWAPHDMHQRFGIEWEIVNDLRIDMARLQQRMNNMQRMLEACMDMQLELQRSIR 767

Query: 401 QEVSSALNRTAGSEA------------WVEGGKTVCQTKNPNETDSKFHLTYIFSFWHMC 460
           QEVS+ALNR+AGS+             W    K +C        DS      ++   HMC
Sbjct: 768 QEVSAALNRSAGSQGVIDDSLPKDAANWDNVRKGICCICCEGNIDS-----LLYRCGHMC 827

Query: 461 TCSKCANELVEAREKCPTCHAPILEVIRAYSL 479
           TCSKCANELV+   KCP C AP++EVIRAYS+
Sbjct: 828 TCSKCANELVQGGGKCPMCRAPVVEVIRAYSI 854

BLAST of CmoCh04G020120 vs. TAIR10
Match: AT5G04460.1 (AT5G04460.1 RING/U-box superfamily protein)

HSP 1 Score: 161.4 bits (407), Expect = 1.4e-39
Identity = 93/212 (43.87%), Postives = 122/212 (57.55%), Query Frame = 1

Query: 281 RRGHSTSNGDLDETMSPYTSVKQEQEHDRQTAGQTGS---AASHPLALPLPPAMPPRQLW 340
           RRGH+  + DL   +        E++ D Q   +  +     +    LP PPA PP+ +W
Sbjct: 657 RRGHTHVDWDLHANLQTAIPDSPERDTDHQVFVRNDNQLNGINGSQLLPTPPAPPPQPIW 716

Query: 341 EHELSHDSLSRRDFHQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMRLELQRSI 400
             +L H S SR   H+    +WE++NDLR D++RLQQ MS +QRMLE CMDM+LELQRS+
Sbjct: 717 HQDLHHTSWSRHSMHRS-EIEWEVMNDLRGDVARLQQGMSQMQRMLEACMDMQLELQRSV 776

Query: 401 KQEVSSALNRTAGSEA-----------WVEGGKTVCQTKNPNETDSKFHLTYIFSFWHMC 460
           +QEVS+ALNR+AG +            W    K  C     N  D+      ++   HMC
Sbjct: 777 RQEVSAALNRSAGDQGMSAETSEDGSRWSHVSKGTCCVCCDNHIDA-----LLYRCGHMC 836

Query: 461 TCSKCANELVEAREKCPTCHAPILEVIRAYSL 479
           TCSKCANELV    KCP C API+EVIRAYS+
Sbjct: 837 TCSKCANELVRNGGKCPLCRAPIIEVIRAYSI 862

BLAST of CmoCh04G020120 vs. TAIR10
Match: AT2G27950.1 (AT2G27950.1 Ring/U-Box superfamily protein)

HSP 1 Score: 161.0 bits (406), Expect = 1.8e-39
Identity = 97/213 (45.54%), Postives = 129/213 (60.56%), Query Frame = 1

Query: 280 NRRGHSTSNGDLDETMSPYTSVKQ--EQEHDRQTAGQTGSAA-SHPLALPLPPAMPPRQL 339
           +RR  +  + +  ET S +T V +  EQ+ D Q+ GQ   A  S PL LP  P +P +  
Sbjct: 632 DRRSQNPVDWEEAETYSDHTIVGEDTEQQDDAQSGGQELDAVESPPLTLP-SPVIPIQPR 691

Query: 340 WEHELSHDSLSRRDFHQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMRLELQRS 399
           W+H+ SH +    D HQ  G DW+ INDLR+DM R+QQRM NLQRMLE CM+M+LELQRS
Sbjct: 692 WDHDRSHSNWPAHDLHQGIGMDWDSINDLRVDMGRIQQRMDNLQRMLEACMEMQLELQRS 751

Query: 400 IKQEVSSALNR----------TAGSEA-WVEGGKTVCQTKNPNETDSKFHLTYIFSFWHM 459
           I+QEVS+A++R          TA  E+ W    K +C     +  DS      ++   HM
Sbjct: 752 IRQEVSAAMHRSTDQPGPSKDTASYESKWEYVRKGICCVCCESNIDS-----LLYRCGHM 811

Query: 460 CTCSKCANELVEAREKCPTCHAPILEVIRAYSL 479
            TC KCA +LVEA  KCP C AP++EV+RAYS+
Sbjct: 812 NTCEKCAKKLVEAGGKCPMCQAPVIEVVRAYSI 838

BLAST of CmoCh04G020120 vs. TAIR10
Match: AT2G34920.1 (AT2G34920.1 RING/U-box superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 2.6e-09
Identity = 40/107 (37.38%), Postives = 55/107 (51.40%), Query Frame = 1

Query: 370 SRLQQRMSNLQRMLETCMDMRLELQRSIKQEVSSALNRTAGSEAWVEGGKTVCQTKNPNE 429
           S LQ  MS L+  ++TC+D+   LQ+S+  E  +   R             VC     NE
Sbjct: 561 STLQLEMSELRDSVKTCLDVNASLQKSVHLE--NPFKRKC----------CVC-----NE 620

Query: 430 TDSKFHLTYIFSFWHMCTCSKCANELVEAREKCPTCHAPILEVIRAY 477
           T  +   T ++   HMCTC +CANEL     KCP CHA IL+V+R +
Sbjct: 621 TQVE---TLLYRCGHMCTCLRCANELQYNGGKCPICHAKILDVVRVF 647

BLAST of CmoCh04G020120 vs. TAIR10
Match: AT1G30860.1 (AT1G30860.1 RING/U-box superfamily protein)

HSP 1 Score: 55.1 bits (131), Expect = 1.4e-07
Identity = 49/187 (26.20%), Postives = 75/187 (40.11%), Query Frame = 1

Query: 288 NGDLDETMSPYTSVKQEQEHDRQTAGQTGSAASHPLALPLPPAMPPRQLWEHELSHDSLS 347
           N ++DE +        E++ DR    Q  S++SH     +  + P       +    S  
Sbjct: 564 NFEIDEEIKEEPLRGGEEQDDRDDLSQ--SSSSH-----ISASSPAGSWSSQDTDVTSTP 623

Query: 348 RRDFHQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMRLELQRSIKQEVSSALNR 407
                     + E+I+ +R  + +LQQ MS L+  ++TC+D    LQ    QE       
Sbjct: 624 ALVVQNPQSPEMELISGMRSQIQQLQQEMSVLRDSVKTCLDANASLQHKAHQENPMKRKC 683

Query: 408 TAGSEAWVEGGKTVCQTKNPNETDSKFHLTYIFSFWHMCTCSKCANELVEAREKCPTCHA 467
               E  VE                      ++   HMC C KCANEL  +  KCP C A
Sbjct: 684 CVCDETQVEA--------------------VLYRCGHMCMCLKCANELHWSGGKCPICRA 723

Query: 468 PILEVIR 475
            I++V+R
Sbjct: 744 QIVDVVR 723

BLAST of CmoCh04G020120 vs. NCBI nr
Match: gi|449456168|ref|XP_004145822.1| (PREDICTED: uncharacterized protein LOC101214410 isoform X2 [Cucumis sativus])

HSP 1 Score: 449.9 bits (1156), Expect = 5.6e-123
Identity = 288/554 (51.99%), Postives = 331/554 (59.75%), Query Frame = 1

Query: 6   HISAGL-EYFDPRITSDNSVQDQASSGHSDTTYNSDDGYSLTDLNRTRSFEVLDDLPGRS 65
           H  +GL E F  R+  D+SVQ QASS HSDTT NSDDG SLTDLNRT SFEVLDDL   S
Sbjct: 296 HTVSGLREGFFSRL--DSSVQSQASSRHSDTTSNSDDGDSLTDLNRTGSFEVLDDLREHS 355

Query: 66  GPINVESHNASSYSIGLT--------------------------QVEENCVASQTADINS 125
           G +NVESH  S  + GLT                          QV E+ +ASQT D NS
Sbjct: 356 GIVNVESHEGSHST-GLTEVRPDPEGSTSEAREEPVPVVESSEKQVAESGLASQTPDTNS 415

Query: 126 MEMREDSGQRMRRILQEIAAKNLYLEVPQIDAEDHTSIPDVESSIQQIDTREEYDDIGVL 185
            EMR+DSGQ MR ILQE A+  LY E+PQIDAEDHTS+ D E SIQQ +T +E    G +
Sbjct: 416 TEMRDDSGQGMRSILQETASNLLYREIPQIDAEDHTSVLDTEPSIQQDNTHDENVHDGSV 475

Query: 186 SDNSRSFQDNDLENVDPLESTSHEELNEDLGMGVEPNDWQAYGFQRDEWKNSI------- 245
            D+S  FQDNDLE+VDP ES +H+ELNEDLG  VEPND QA GFQ+DEW+NSI       
Sbjct: 476 FDHSERFQDNDLESVDPQESNTHDELNEDLGTVVEPNDRQASGFQQDEWENSIEEDINET 535

Query: 246 ---------EEDINETRLESITL--------------------LIGLENSRVRHTEEIFI 305
                     E+   T    I L                      GL N     +  +  
Sbjct: 536 HMESIGTNWSEEFLSTTYRDIHLQNAPEASHENAIFVEDVPNWFEGLPNREATSSRRLET 595

Query: 306 CKMPLELHMKMLSLWRMCLIGEVSLLFLVVVSEKV------LTNRRGHSTSNGDLDETMS 365
              P + +     +  +     VS L      E +         R+GH + N D+DE M 
Sbjct: 596 FYFPEDDNAHNGEIRELLSRRSVSTLLSSGFRESLDQLIQSYVERQGHGSGNRDMDEMMP 655

Query: 366 PYTSVKQEQEHDRQTAGQTGSAASHPLALPLPPAMPPRQLWEHELSHDSLSRRDFHQQFG 425
           PYTS +QEQEHDRQ+ GQ GS  SH LALPLPP +P R LW++ELS+ S SRRDF QQFG
Sbjct: 656 PYTSAEQEQEHDRQSEGQAGSVESHSLALPLPPTLPSRPLWDNELSNGSWSRRDFRQQFG 715

Query: 426 ADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMRLELQRSIKQEVSSALNRTAGSE---- 479
           ADWEIINDLRIDMSRLQQRMSNLQRMLETCMDM+LELQRSIKQEVSSALNR AGSE    
Sbjct: 716 ADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRAAGSEEMFE 775

BLAST of CmoCh04G020120 vs. NCBI nr
Match: gi|778713418|ref|XP_011657046.1| (PREDICTED: uncharacterized protein LOC101214410 isoform X1 [Cucumis sativus])

HSP 1 Score: 449.5 bits (1155), Expect = 7.3e-123
Identity = 288/555 (51.89%), Postives = 331/555 (59.64%), Query Frame = 1

Query: 6   HISAGL--EYFDPRITSDNSVQDQASSGHSDTTYNSDDGYSLTDLNRTRSFEVLDDLPGR 65
           H  +GL  E F  R+  D+SVQ QASS HSDTT NSDDG SLTDLNRT SFEVLDDL   
Sbjct: 296 HTVSGLSREGFFSRL--DSSVQSQASSRHSDTTSNSDDGDSLTDLNRTGSFEVLDDLREH 355

Query: 66  SGPINVESHNASSYSIGLT--------------------------QVEENCVASQTADIN 125
           SG +NVESH  S  + GLT                          QV E+ +ASQT D N
Sbjct: 356 SGIVNVESHEGSHST-GLTEVRPDPEGSTSEAREEPVPVVESSEKQVAESGLASQTPDTN 415

Query: 126 SMEMREDSGQRMRRILQEIAAKNLYLEVPQIDAEDHTSIPDVESSIQQIDTREEYDDIGV 185
           S EMR+DSGQ MR ILQE A+  LY E+PQIDAEDHTS+ D E SIQQ +T +E    G 
Sbjct: 416 STEMRDDSGQGMRSILQETASNLLYREIPQIDAEDHTSVLDTEPSIQQDNTHDENVHDGS 475

Query: 186 LSDNSRSFQDNDLENVDPLESTSHEELNEDLGMGVEPNDWQAYGFQRDEWKNSI------ 245
           + D+S  FQDNDLE+VDP ES +H+ELNEDLG  VEPND QA GFQ+DEW+NSI      
Sbjct: 476 VFDHSERFQDNDLESVDPQESNTHDELNEDLGTVVEPNDRQASGFQQDEWENSIEEDINE 535

Query: 246 ----------EEDINETRLESITL--------------------LIGLENSRVRHTEEIF 305
                      E+   T    I L                      GL N     +  + 
Sbjct: 536 THMESIGTNWSEEFLSTTYRDIHLQNAPEASHENAIFVEDVPNWFEGLPNREATSSRRLE 595

Query: 306 ICKMPLELHMKMLSLWRMCLIGEVSLLFLVVVSEKV------LTNRRGHSTSNGDLDETM 365
               P + +     +  +     VS L      E +         R+GH + N D+DE M
Sbjct: 596 TFYFPEDDNAHNGEIRELLSRRSVSTLLSSGFRESLDQLIQSYVERQGHGSGNRDMDEMM 655

Query: 366 SPYTSVKQEQEHDRQTAGQTGSAASHPLALPLPPAMPPRQLWEHELSHDSLSRRDFHQQF 425
            PYTS +QEQEHDRQ+ GQ GS  SH LALPLPP +P R LW++ELS+ S SRRDF QQF
Sbjct: 656 PPYTSAEQEQEHDRQSEGQAGSVESHSLALPLPPTLPSRPLWDNELSNGSWSRRDFRQQF 715

Query: 426 GADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMRLELQRSIKQEVSSALNRTAGSE--- 479
           GADWEIINDLRIDMSRLQQRMSNLQRMLETCMDM+LELQRSIKQEVSSALNR AGSE   
Sbjct: 716 GADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIKQEVSSALNRAAGSEEMF 775

BLAST of CmoCh04G020120 vs. NCBI nr
Match: gi|659130940|ref|XP_008465430.1| (PREDICTED: uncharacterized protein LOC103503044 isoform X2 [Cucumis melo])

HSP 1 Score: 266.5 bits (680), Expect = 8.7e-68
Identity = 143/212 (67.45%), Postives = 157/212 (74.06%), Query Frame = 1

Query: 281 RRGHSTSNGDLDETMSPYTSVKQEQEHDRQTAGQTGSAASHPLALPLP--PAMPPRQLWE 340
           R+GH T N D+DE M PYTS +QEQEHDRQ+ GQ GS  SH LALPLP  P +P RQLW+
Sbjct: 638 RQGHGTGNRDMDEMMPPYTSAEQEQEHDRQSEGQAGSVESHSLALPLPLPPTLPSRQLWD 697

Query: 341 HELSHDSLSRRDFHQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMRLELQRSIK 400
           +ELS+ S SRRDF QQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDM+LELQRSIK
Sbjct: 698 NELSNGSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIK 757

Query: 401 QEVSSALNRTAGSE------------AWVEGGKTVCQTKNPNETDSKFHLTYIFSFWHMC 460
           QEVSSALNR AGSE             W    K +C     N  D+      ++   HMC
Sbjct: 758 QEVSSALNRAAGSEEMFEDSLPDDEPKWDRVRKGICCICCDNHIDA-----LLYRCGHMC 817

Query: 461 TCSKCANELVEAREKCPTCHAPILEVIRAYSL 479
           TCSKCANELV+AR KCP CHAPILEVIRAYSL
Sbjct: 818 TCSKCANELVDARGKCPMCHAPILEVIRAYSL 844

BLAST of CmoCh04G020120 vs. NCBI nr
Match: gi|659130942|ref|XP_008465431.1| (PREDICTED: probable GPI-anchored adhesin-like protein PGA55 isoform X3 [Cucumis melo])

HSP 1 Score: 266.5 bits (680), Expect = 8.7e-68
Identity = 143/212 (67.45%), Postives = 157/212 (74.06%), Query Frame = 1

Query: 281 RRGHSTSNGDLDETMSPYTSVKQEQEHDRQTAGQTGSAASHPLALPLP--PAMPPRQLWE 340
           R+GH T N D+DE M PYTS +QEQEHDRQ+ GQ GS  SH LALPLP  P +P RQLW+
Sbjct: 624 RQGHGTGNRDMDEMMPPYTSAEQEQEHDRQSEGQAGSVESHSLALPLPLPPTLPSRQLWD 683

Query: 341 HELSHDSLSRRDFHQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMRLELQRSIK 400
           +ELS+ S SRRDF QQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDM+LELQRSIK
Sbjct: 684 NELSNGSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIK 743

Query: 401 QEVSSALNRTAGSE------------AWVEGGKTVCQTKNPNETDSKFHLTYIFSFWHMC 460
           QEVSSALNR AGSE             W    K +C     N  D+      ++   HMC
Sbjct: 744 QEVSSALNRAAGSEEMFEDSLPDDEPKWDRVRKGICCICCDNHIDA-----LLYRCGHMC 803

Query: 461 TCSKCANELVEAREKCPTCHAPILEVIRAYSL 479
           TCSKCANELV+AR KCP CHAPILEVIRAYSL
Sbjct: 804 TCSKCANELVDARGKCPMCHAPILEVIRAYSL 830

BLAST of CmoCh04G020120 vs. NCBI nr
Match: gi|659130938|ref|XP_008465429.1| (PREDICTED: uncharacterized protein LOC103503044 isoform X1 [Cucumis melo])

HSP 1 Score: 266.5 bits (680), Expect = 8.7e-68
Identity = 143/212 (67.45%), Postives = 157/212 (74.06%), Query Frame = 1

Query: 281 RRGHSTSNGDLDETMSPYTSVKQEQEHDRQTAGQTGSAASHPLALPLP--PAMPPRQLWE 340
           R+GH T N D+DE M PYTS +QEQEHDRQ+ GQ GS  SH LALPLP  P +P RQLW+
Sbjct: 639 RQGHGTGNRDMDEMMPPYTSAEQEQEHDRQSEGQAGSVESHSLALPLPLPPTLPSRQLWD 698

Query: 341 HELSHDSLSRRDFHQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMRLELQRSIK 400
           +ELS+ S SRRDF QQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDM+LELQRSIK
Sbjct: 699 NELSNGSWSRRDFRQQFGADWEIINDLRIDMSRLQQRMSNLQRMLETCMDMQLELQRSIK 758

Query: 401 QEVSSALNRTAGSE------------AWVEGGKTVCQTKNPNETDSKFHLTYIFSFWHMC 460
           QEVSSALNR AGSE             W    K +C     N  D+      ++   HMC
Sbjct: 759 QEVSSALNRAAGSEEMFEDSLPDDEPKWDRVRKGICCICCDNHIDA-----LLYRCGHMC 818

Query: 461 TCSKCANELVEAREKCPTCHAPILEVIRAYSL 479
           TCSKCANELV+AR KCP CHAPILEVIRAYSL
Sbjct: 819 TCSKCANELVDARGKCPMCHAPILEVIRAYSL 845

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KDG6_CUCSA3.9e-12351.99Uncharacterized protein OS=Cucumis sativus GN=Csa_6G149350 PE=4 SV=1[more]
B9SCM1_RICCO1.3e-4650.94Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0475470 PE=4 SV=1[more]
V4SFT9_9ROSI8.0e-4449.30Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027818mg PE=4 SV=1[more]
A0A061GW37_THECC1.8e-4348.11Ring/U-Box superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_041... [more]
A0A061GWA6_THECC1.8e-4348.11Ring/U-Box superfamily protein, putative isoform 3 OS=Theobroma cacao GN=TCM_041... [more]
Match NameE-valueIdentityDescription
AT5G04460.11.4e-3943.87 RING/U-box superfamily protein[more]
AT2G27950.11.8e-3945.54 Ring/U-Box superfamily protein[more]
AT2G34920.12.6e-0937.38 RING/U-box superfamily protein[more]
AT1G30860.11.4e-0726.20 RING/U-box superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449456168|ref|XP_004145822.1|5.6e-12351.99PREDICTED: uncharacterized protein LOC101214410 isoform X2 [Cucumis sativus][more]
gi|778713418|ref|XP_011657046.1|7.3e-12351.89PREDICTED: uncharacterized protein LOC101214410 isoform X1 [Cucumis sativus][more]
gi|659130940|ref|XP_008465430.1|8.7e-6867.45PREDICTED: uncharacterized protein LOC103503044 isoform X2 [Cucumis melo][more]
gi|659130942|ref|XP_008465431.1|8.7e-6867.45PREDICTED: probable GPI-anchored adhesin-like protein PGA55 isoform X3 [Cucumis ... [more]
gi|659130938|ref|XP_008465429.1|8.7e-6867.45PREDICTED: uncharacterized protein LOC103503044 isoform X1 [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G020120.1CmoCh04G020120.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 362..389
scor
NoneNo IPR availablePANTHERPTHR10044INHIBITOR OF APOPTOSIScoord: 155..477
score: 5.9E-58coord: 21..63
score: 5.9
NoneNo IPR availablePANTHERPTHR10044:SF106RING/U-BOX DOMAIN-CONTAINING PROTEINcoord: 155..477
score: 5.9E-58coord: 21..63
score: 5.9

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None