CmoCh04G020020 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTGTGTCATCTTCAATGCACAAATGCAACTTCTCCATCATCAACGTTTCACCTTCTTCACTTCTTTGCAAATGACTATAATTAGGGCTTCGGCATCCGCTTCCTTTTCTCCTTTGCACATGACTACACATAGGGTTTCCATCTTTGAAACTTCTTCTTTTGGGTCGAAATGTAACACACCTCTTTATCTTATTCATCGCATACTCACATATTTTACAGCCATGATCAGTTCAAAGAAACTTTCCCTACAGCGTCCATTTGTCAATTCCTAGTAAACTCTGCTCTATTATTGAAGCTTGGGGTTTCAGATGCGGGCAATTCCACCTACATTGCTTCAGATAAAAGCTTAGCTGCTCCCTATTGTTATCATTTCAATGAAATTAATATCAAGGAATACTCAAGGTCTTGGAGATTCCTATAAAGGGTCGGCTTGGTTGACAGAAAGTCTAGTGGAAAGGTATACGAAGGGTTAGGGGATGAATCTTCTCATTAATTAATTGACAGGTTTTTGGTTTTGAAATAATGAGATAACTTATTTGATAATTCCAAGAGTGTGGAACAATAATTGAGAAGTCTCTCCTTCAAGATCGTTCTTATTAAGATTTAAGATTTGGAATGCTGAGAACGAAGACAAAAGAAAAAATAAAAAGCCTCCTTTTGGATTTGAAACTGAAATCGAGATTCTTTCTCCTTTTTATATCAAAATCTCTTGGATACTTCAGCCAACTTGATGTTGCTATCACATTTTCTGCCTTCCTTTTTGCAACTATGTTGTTTCTACACAGAGGTAGTCCTCAATTTGCTCAATTAGGCGGTGAAATATTTGTTTTATTTTATAGTGGTTATCTTGTTTTAGATCAAACTTTGTTGTGGGTTGGCCATTCTAGCCTTAAACTCAAAATTAGTAGTATGGCCATTTCTCTTGGAGGCTGAGCTCGTTGGTCTGTTGACCTTGTTTAATTTATATGAGCATTGTAGCTGATTTGTATGCTTGGTTGCAAAGTTGGAGGTCGATTCATGATTTTCATCGGAAGGTTGTAGTAGCTTTTGGTTTTAAGTGTTTGGTGGCGGCCTTTTTCATAGCTTCAGTTTTTGTTTGCTAGCTCTCCAAGTCTTTCGGGTGAAGATATTGAAAAGTTCTTTGTTCTTTCCTGGTTTATTTTCATGGTTAAATCCTTACGTGGATGTATTTACTGTTTTGTATCTTTTTCTTGTTATTTTCATTCCCTTTGTGTGTTTGTATCCCTTGAGCATTTATTCCTTTTTATTATATTAGTGAGAAGTTATTTCTTGTTTTTTAAAAAGTTGGCCGTAATTCTGAATCTTCTCAAACTGATATCAGATTCTGCGTCAGAATCATCATTATGTACATGTTTATCATATTGGTCACTAAAACCGTACATGATGCTCTATTAATCTCTTGCTTTTTGAATTTAGGTAAAGTTGCAAAATGAAGCAAACCTTCGGATGAAAGCTGAGTCTTCAATTGCATTGTCAGAAGAGAAAGCTAAACTCTTAGAAGATAAATTAAACCATTTTTCTGAAAGCATAGAAAGAGAAAGGAAACGTCTTCATGGTGAGCTTGCGCAGTTAAAAGGAGAATCAAAACTTTCTGTTTCAAGGATAAATGCAGATGTAAGTTGACACTTATCGATCACATTCCTCGAAAGAATTCTTGCTGAACATATAAAATTCTCTTATAAAATGTCAAGCAACATTTGTTTGATCATCATGGAAGACTAAACCGTTTAACTTGTCTTGATGATCTTTATTGTAGCTGGAAAAGATGGTTTGCAGAGCTAGTAATGCTGAGAAGGAATCTGAGCTACTAAAAGAGCAGTTGGAAGATTTGAAGAAGCAACTCAATGAGGTCTGTTGCCTTCGTGATTATTTGTGTTAGGTTTTCTGAGAGAATTTTACTAGGATGTCTTTTTCTCTATTGTCTTATTCTACCTTATTGTCTTATTCTCTATGTCTTATTCTACCTTATTGTAATTCAACATCTCTCATTTTATGTCTTTATATTGTGAGTGTCAATTAAACTTGCAATGTGTATACCTTAACTGGTTTCTTTAAGTAGGTGGCTCCTATGGAGTTTGAACCCATAAAACTTCATTGTCCTTTACCCTTTTTTGCTTGCCCTGATGGTTATTAGACCAACTTAGGGGGTTATTATAATGGTTGAAGAAAAAACCTTGATAGAAGGAATATTAATATAATCTCATTAAACGAGAGAAGTAGTTAATCTTATTTATATTATTACCTAGTAATTAAAGATTTATTTAGATTTATCTTATCTTGTTACCTATTATCTTGGGATTTATTTAGATTACCGAGTATCAAGGGAATTTAGATTATCTGTTGATTTAGATTTAGTTAGTCTTTTTCCCTCTAAAAGGGACGTAATTCTCTAAAAAAAAGAAAAGAAAAACAGCCCTCTAATTTAGATTTGCAACATGGTATTAGAGTTTTTCTATCTTGAAAATTTTGATTAGAACCAAAACCCTAACTCAATCGTTGAAGTCTTCGTTCCTGCTGATCATCAATCATGATGAAGTTTCATTTGAAGGCTGCGTCACCGTGA ATGGGTTGTGTCATCTTCAATGCACAAATGCAACTTCTCCATCATCAACGTTTCACCTTCTTCACTTCTTTGCAAATGACTATAATTAGGGCTTCGGCATCCGCTTCCTTTTCTCCTTTGCACATGACTACACATAGGGTAAAGTTGCAAAATGAAGCAAACCTTCGGATGAAAGCTGAGTCTTCAATTGCATTGTCAGAAGAGAAAGCTAAACTCTTAGAAGATAAATTAAACCATTTTTCTGAAAGCATAGAAAGAGAAAGGAAACGTCTTCATGGTGAGCTTGCGCAGTTAAAAGGAGAATCAAAACTTTCTGTTTCAAGGATAAATGCAGATCTGGAAAAGATGGTTTGCAGAGCTAGTAATGCTGAGAAGGAATCTGAGCTACTAAAAGAGCAGTTGGAAGATTTGAAGAAGCAACTCAATGAGGCTGCGTCACCGTGA ATGGGTTGTGTCATCTTCAATGCACAAATGCAACTTCTCCATCATCAACGTTTCACCTTCTTCACTTCTTTGCAAATGACTATAATTAGGGCTTCGGCATCCGCTTCCTTTTCTCCTTTGCACATGACTACACATAGGGTAAAGTTGCAAAATGAAGCAAACCTTCGGATGAAAGCTGAGTCTTCAATTGCATTGTCAGAAGAGAAAGCTAAACTCTTAGAAGATAAATTAAACCATTTTTCTGAAAGCATAGAAAGAGAAAGGAAACGTCTTCATGGTGAGCTTGCGCAGTTAAAAGGAGAATCAAAACTTTCTGTTTCAAGGATAAATGCAGATCTGGAAAAGATGGTTTGCAGAGCTAGTAATGCTGAGAAGGAATCTGAGCTACTAAAAGAGCAGTTGGAAGATTTGAAGAAGCAACTCAATGAGGCTGCGTCACCGTGA
BLAST of CmoCh04G020020 vs. Swiss-Prot
Match: MAD1_ARATH (Mitotic spindle checkpoint protein MAD1 OS=Arabidopsis thaliana GN=MAD1 PE=1 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 2.0e-23 Identity = 64/97 (65.98%), Postives = 76/97 (78.35%), Query Frame = 1
BLAST of CmoCh04G020020 vs. TrEMBL
Match: A0A0A0KV95_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G630750 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 8.7e-34 Identity = 86/97 (88.66%), Postives = 90/97 (92.78%), Query Frame = 1
BLAST of CmoCh04G020020 vs. TrEMBL
Match: A5AXP6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010896 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 5.5e-28 Identity = 76/96 (79.17%), Postives = 83/96 (86.46%), Query Frame = 1
BLAST of CmoCh04G020020 vs. TrEMBL
Match: A0A061G8K7_THECC (Mitotic checkpoint family protein isoform 1 OS=Theobroma cacao GN=TCM_027116 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 7.2e-28 Identity = 75/96 (78.12%), Postives = 84/96 (87.50%), Query Frame = 1
BLAST of CmoCh04G020020 vs. TrEMBL
Match: A0A061GFE7_THECC (Mitotic spindle assembly checkpoint protein MAD1 isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_027116 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 7.2e-28 Identity = 75/96 (78.12%), Postives = 84/96 (87.50%), Query Frame = 1
BLAST of CmoCh04G020020 vs. TrEMBL
Match: A0A061G7C9_THECC (Mitotic spindle assembly checkpoint protein MAD1 isoform 3 OS=Theobroma cacao GN=TCM_027116 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 7.2e-28 Identity = 75/96 (78.12%), Postives = 84/96 (87.50%), Query Frame = 1
BLAST of CmoCh04G020020 vs. TAIR10
Match: AT5G49880.1 (AT5G49880.1 mitotic checkpoint family protein) HSP 1 Score: 110.2 bits (274), Expect = 1.1e-24 Identity = 64/97 (65.98%), Postives = 76/97 (78.35%), Query Frame = 1
BLAST of CmoCh04G020020 vs. NCBI nr
Match: gi|659121307|ref|XP_008460594.1| (PREDICTED: myosin heavy chain, clone 203 [Cucumis melo]) HSP 1 Score: 153.7 bits (387), Expect = 2.5e-34 Identity = 87/97 (89.69%), Postives = 91/97 (93.81%), Query Frame = 1
BLAST of CmoCh04G020020 vs. NCBI nr
Match: gi|449449214|ref|XP_004142360.1| (PREDICTED: mitotic spindle checkpoint protein MAD1 [Cucumis sativus]) HSP 1 Score: 151.4 bits (381), Expect = 1.3e-33 Identity = 86/97 (88.66%), Postives = 90/97 (92.78%), Query Frame = 1
BLAST of CmoCh04G020020 vs. NCBI nr
Match: gi|700197195|gb|KGN52372.1| (hypothetical protein Csa_5G630750 [Cucumis sativus]) HSP 1 Score: 151.4 bits (381), Expect = 1.3e-33 Identity = 86/97 (88.66%), Postives = 90/97 (92.78%), Query Frame = 1
BLAST of CmoCh04G020020 vs. NCBI nr
Match: gi|694329222|ref|XP_009355380.1| (PREDICTED: spindle assembly checkpoint component mad1 [Pyrus x bretschneideri]) HSP 1 Score: 134.4 bits (337), Expect = 1.6e-28 Identity = 74/97 (76.29%), Postives = 86/97 (88.66%), Query Frame = 1
BLAST of CmoCh04G020020 vs. NCBI nr
Match: gi|645223468|ref|XP_008218644.1| (PREDICTED: calponin homology domain-containing protein DDB_G0272472 [Prunus mume]) HSP 1 Score: 132.1 bits (331), Expect = 7.9e-28 Identity = 74/97 (76.29%), Postives = 85/97 (87.63%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |