CmoCh04G019540 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAGCGAACCATAGTCAATCTCGAGTTCTCGACCATCTTCGACCTTGAGGGAGCAGTGATCGAATTGGCGCTCTCCCTCCCCAAAACATTTTGGTGTTCCTGATTTTCTCTGCATTTCAACGATGGATTCTGCTGAACCACTGATTAAGGATCTTGGAGAAAAAGCAAGAAGGGCTTCTCAACTATGGCTTGAAGGTTTTATTGACGCCTGTTGTCTTCACCGTGTTGTGATCCTCTGTCGCAGGTGCCATCTCACGTCTTCCACTTGTACTTTAACTTCGTAGTTTGATTTTCTATCGCTGAGATTACTGGACGGGAATCTATGAACACTAATTCTTACGTTTTTTCCCCCTTTTTTGCTTTTAATTGAGTTTAACAAGCTTTCTCAAGGATGTATGAGGGGAAAGAAGAAGGATTTTCTCGACTTCTTTACTATGAATTAAGCTTCTTTTGTTGTTGTTTTTATAATATCATCTGAGGATGTGTTTCAGGTCGAAAAAGCTTTTGATCCGGACGGGTCAGTGTTTTTTATTGAATGGTTTGATCTTCTTAGGAAGGTAATTCTACTCGACCCTCTCTCTCTCTCTCTTTGCGCATCATTTTCGGGATATAGCATTTACTCTTGTTCCCACTTTTCCGTTTCAAATAAACAACCAATTTGCCTTTTTTTTGTCGGCTCTTCTGTTGTGTTTCTGAATTACGCTCTTTAAGAACTTATTAACTAGTAATATGTTGCAAGGAATTCAAATAGGATAGCACGATCTAGTCTATGTTAGGAATATGCATTCTTTCCATCTCCACATTGGGATGAAGCTATCCAATTTGAACTTAATTCAATTTAGGAATTTATAAACTCACAATATTTCTTCCTTTGATTGATATGGAAATTTGCCTGCATCTTTGTCAATCTATTCATATATTGTCTAAAAATTTAATAGGGTTTCGGTTTTATGACGTTGCGGATCATACGTCTCAAAATCATTGAATTTGAACATTTCTCACGATAATGTCAAAAAATAACAACCGTAACTCAGTTTTTTATTCTGCATGCTTTAACTCAGTCTTGGAGCTAATGAAAACTAAGTTTTGGCTCTTGAGCAGTGGTCTAATCGAACTGAGTCAGAAACTTACTTCTCGACTCTTTCCTTAAAGTTTCTCTCCCTCCTTTTCTCTCTTGAGGGTGAGGGGGATGTCCACATTCTTGTGTCTTGTGGACTACGGTTTAGTTTTTTGTAATAGAAATTAATAACATATTTCAAGGACCTTAATTTTCTCAGAGATTGTTTTGACATATCTAGTTTTCATCAGCACTTCCCTGTCTCTTTTGTTTCTTAACAAAAAAATGTTAAACAATGAAAAGTCAGCAGCTTTCTTGCTTCCTTTTTTGCAGTCTATTGATCCTAAACTCAGTTGTCATCCCAACCCTACAATGGATATTACCGGATCAGCAATCAATGATTGGTTCTCACAAGTTGGCCGCATTTGGTGGTGCTTTAAAATTATATTCTTTCTTACGTCATGGACTGATACAACTTTTTTATGTAAGTACATATTTGATGCCATGTTTTTACTTGTGGGGTTAATAAAGAAGTTGTTTCTCCGGCATGCATCACAAATTATTTAATTTTTCCAACAGTTTCTGTCAAAATTAATTGGAAAAAGACGAACCACGTTTAAAATTACGCTTATAAACTTTTCTTTTTGCGAGTTCAGTAATATTCTTATGGATTATAATATTTCCGTTTGACAGGAGAATTTCTTTGATATTTCAATATGGTTGCATACTATGATTATTGTACTTAACTTGTTTATATGCAATGACTGAACATGATTCAATCAAGAACCTTGGATAACATATTTATTTATTTTGTGTTCATCTCAATTTTTTTTTACCGACTAATTGTTTATGTGAATATTGCTTGCAGTTGTTCTGGTTTTATCCAATGTACATTTTCAGCTTCATTCTGAGCAATATCTGGTATTTCTTTCCCTTCTATTTTCATTCATACTCACACGTTTCTTTTATCATTTCTGCCTCAAATTTGATTTAGTAGGTTTCTAATGCTTATGAATTCTTCAAGCCACATAGTTTCATGATTAAGATTTTATTCAGTTAACGCTTACATTTAAATCTCTGCGTACATCTGGTACACTCATACATCCAGATGGAACGGGTTCAACTAGTAGTTTTTGCGAAGTGACCATTTGTTGATCTGAAGTTTCTGGAGAGTTTCTTTCTGGTCCAGGTACAATGATATTGCTAAACATGGCTTTGCTGCAATGGGACAATCTGAGCCAACCGCAGTGGACTCCTCAGGACTAAACGATGGATCTTCCAATGCTGCTCAAACAGGAAAATCAATTGGATTGGGGAGGTACGTTTTTAATTTGGTCATTGGTGATTTCTGAAATGTTCTTTGCTGCTTGTTTGATGCACTTTTTTGCTTGATACTTGTTTAACCTAAAGTTTTTCTCAGGGTTGTAATAGGAATAGGAGAGCAGCTATATTCTCTACTTCTGATCAACTCCTTCTTCCTTGAGGTAATTGCTTTGAAATTTTGTCTTTCCTTGATGCTCTTATATTTGTTTCTTTCTACTTCATTTGGTTGTGTGTGGTTATCTTTCTTTTATTATGAGCATTTGTAGAAGCCGAGTTGCTTATTTGCAGTTATATATAACATTCACATTCTTCTTCTCGTATCCAATGTCTAAATTGTTTTCTGATACATGTAGGTCTATGCTACAGGTTTCTTGCCTTTCGTGGGAAAGACACTCAATTTTATGCTTCTTTCTTGGATGTACGCCTACTATTGTTTTGAGTATGTGGTGCTTTCCCTTTTAACTTATGATGTGCATCGACTATTCACTTGGTGAACTATTCAATTCAATTCTTTAACTTGTAGGTACAAGTGGAATCTTTCAGAAGTGAGTCTGGATAGAAGGCTGGACTTTTTCGAGTCTAACTGGGCTTTCTTTGCTGGTTTTGGTAGGACTCCATGACTTGATTGATTTATTTAGTTTTAGTTGCTATAGTTTGCTAGTTCCGGTTCTGAATATTAGCAAGGAAAATCTGCTGTTAAATAGTCCATTGCAGCTCCATATGATGTGAAGGTTGATTATAAAGATTAATTTGTTTGTTTTTCAGTGAGATGGCTATTTAGTTAGTTTGATAGGAGAAGTACTAAGTTTGTTTGTTATGATTGGAATATTTTAAAGCGACGGATCTAGGATATAGCTCAATTGGTTAAGGCATAAGGTTAAATGTTTGAATCCTCACATCCACATTCTTGAACTAAGAAAAAGAATCATTACAAATTGGTGGTGGGGAGGGTGAGAGAGGAGTTAAGAGTTCTGATATCAAGCTTGGCTCAAGGAGCCAGTTCTCTATTTACCTGAGATTTTATTCGTATGTTACCATCATTTCCGTACAATAAAAGGTTTCTTTATTCTTGGCTTCTCTCGCTCCCTAAGTTAAGACAACCACCATTATAGCTCTCAATTGGCATATATTGGCTCTTGGCAGTTAACATTAACTTCTTGGTAGACAAAATTGTTACAAATGTGAGCAGTGGATCTAGAAGCAAATATTGAGTATTTGATGGTGTTAAATCCTTTCTCATGACATTTTGCTTTCATTTCATATTTTAGAGTTTTATTTTTATTTCGTGTTTGACTTAAGGCTCATGTCTTTAATTATTAATTAAAATTTGAGCTCATTTCTCTTTTCTTGTCATGGTCACCATAGTTGTGATTTGAAACAATACGTTATACTTTTAAGGAAGTTTGAGGCATACCAGTTTAATGGTCTTTCCAGGTAGTCCTTGCGTTCTTGCGATATTTTTCTTCTCACCACTTGTGAGCTATGGAGTAATGGCTATCTTATTTCCACTGGTAAATCGAACCATTTGTCTCCCTCTCTTCACACACACAAACTCATTTCCTTCTAAATTTGTACCGATGTTCTCTTTCCTCAAATACTCACGTCTTACGGCTCTTTTGTTTGGGTTTCATCCCATATGCCTTTTAGTTTGTTCTGACAGCCACGGGCTCAGTTGCTGAGAAGGATATTTATTCACAGAGAACAACTTGGAAATGTGCAGGACTGGGAAGGCTTCCAATTTTCTATGCTGCAAATACATTGTCGTAAGTTGTCTTTCTTCACGCTAAACTTGTATTTGCAAAATAGAATAATTTGCTGAGACTATTCGAATAACCTTTGGATTTCTGATCTAATAATAATTTCTTGTATCTATATAGAATAGAAGTTGACTAAATGTGACAAGGAACGATGTTTTAAATGTTAAGCAAATGGTGCAAAATCTCTCTGGAGTTGTAACGGGGAAAACAGCAGTCTTTCTAAAAAATGGACAAAAGAAAGAAATTCATCTTCACGAAGATAATAGATAGAGGTTTATTTAGTGACTTTGTGCTCTGTAATATAGGAGTAGAATAAATTGTAGAGATTGAACCAACGAATGGAAAACCTGAAAAACTTCAATTATGTGATATTTTGAACTTTACTAGATTAGAACTGTCCGTGAAGCAGGGAAACTTTAGTATTGCCTACCAATGTTTTTTCCCCATGTTGATTGGCCTTGAAGGATGAAGCTCTTGACTCTCTTCCCTCATGAATCACAAGAAAAGATGCAGCAAAACAAGGAACTATAACAGGTTCTGGAGTCTGAATCAATACATATCCGTTTCATGAACAGTAAGCCAAAATTCATTAGCCATTGCCTTCTATTCAGAATATTTCCTGCATGTTCATTTATTTATGAAGTATTGCTGCATAATATATCGTCTCTCAATTCTTAATCTATCTGATGGAGCAGAATCCAAGTGGCTCAAGTCAGATGCTACAAGTGATTCCTACCTCATCCGTACAGAAACGATACCGTAGGTGAAGATCAACCATAGGTAGATTCATAACCGCAGTTTGTAAGATTGGTTGCTGTGTGAATATCGAATAGGTACGCAATTAATTGGGCGAATAGATAAGAATGTGCGATGCCGAGTGATAATTTTTCTGTAACCTCGTTAAATAATGTAAATAACTTATGTTTAGTAGAAAGATTGTTCCAACTCTCTGCTTCAGTTCTTTGTGTGAATTATGTACAATCAAGAATGAACAACTTAGAGTGGATAGAGTTGATAAAATCGTTGTGCA GAAGCGAACCATAGTCAATCTCGAGTTCTCGACCATCTTCGACCTTGAGGGAGCAGTGATCGAATTGGCGCTCTCCCTCCCCAAAACATTTTGGTGTTCCTGATTTTCTCTGCATTTCAACGATGGATTCTGCTGAACCACTGATTAAGGATCTTGGAGAAAAAGCAAGAAGGGCTTCTCAACTATGGCTTGAAGGTTTTATTGACGCCTGTTGTCTTCACCGTGTTGTGATCCTCTGTCGCAGGTCGAAAAAGCTTTTGATCCGGACGGGTCAGTGTTTTTTATTGAATGGTTTGATCTTCTTAGGAAGTCTATTGATCCTAAACTCAGTTGTCATCCCAACCCTACAATGGATATTACCGGATCAGCAATCAATGATTGGTTCTCACAAGTTGGCCGCATTTGGTGGTGCTTTAAAATTATATTCTTTCTTACGTCATGGACTGATACAACTTTTTTATTTGTTCTGGTTTTATCCAATGTACATTTTCAGCTTCATTCTGAGCAATATCTGGTACAATGATATTGCTAAACATGGCTTTGCTGCAATGGGACAATCTGAGCCAACCGCAGTGGACTCCTCAGGACTAAACGATGGATCTTCCAATGCTGCTCAAACAGGAAAATCAATTGGATTGGGGAGGGTTGTAATAGGAATAGGAGAGCAGCTATATTCTCTACTTCTGATCAACTCCTTCTTCCTTGAGGTCTATGCTACAGGTTTCTTGCCTTTCGTGGGAAAGACACTCAATTTTATGCTTCTTTCTTGGATGTACGCCTACTATTGTTTTGAGTACAAGTGGAATCTTTCAGAAGTGAGTCTGGATAGAAGGCTGGACTTTTTCGAGTCTAACTGGGCTTTCTTTGCTGGTTTTGGTAGTCCTTGCGTTCTTGCGATATTTTTCTTCTCACCACTTGTGAGCTATGGAGTAATGGCTATCTTATTTCCACTGTTTGTTCTGACAGCCACGGGCTCAGTTGCTGAGAAGGATATTTATTCACAGAGAACAACTTGGAAATGTGCAGGACTGGGAAGGCTTCCAATTTTCTATGCTGCAAATACATTGTCGATGAAGCTCTTGACTCTCTTCCCTCATGAATCACAAGAAAAGATGCAGCAAAACAAGGAACTATAACAGGTTCTGGAGTCTGAATCAATACATATCCGTTTCATGAACAAATCCAAGTGGCTCAAGTCAGATGCTACAAGTGATTCCTACCTCATCCGTACAGAAACGATACCGTAGGTGAAGATCAACCATAGGTAGATTCATAACCGCAGTTTGTAAGATTGGTTGCTGTGTGAATATCGAATAGGTACGCAATTAATTGGGCGAATAGATAAGAATGTGCGATGCCGAGTGATAATTTTTCTGTAACCTCGTTAAATAATGTAAATAACTTATGTTTAGTAGAAAGATTGTTCCAACTCTCTGCTTCAGTTCTTTGTGTGAATTATGTACAATCAAGAATGAACAACTTAGAGTGGATAGAGTTGATAAAATCGTTGTGCA ATGGATTCTGCTGAACCACTGATTAAGGATCTTGGAGAAAAAGCAAGAAGGGCTTCTCAACTATGGCTTGAAGGTTTTATTGACGCCTGTTGTCTTCACCGTGTTGTGATCCTCTGTCGCAGGTCGAAAAAGCTTTTGATCCGGACGGGTCAGTGTTTTTTATTGAATGGTTTGATCTTCTTAGGAAGTCTATTGATCCTAAACTCAGTTGTCATCCCAACCCTACAATGGATATTACCGGATCAGCAATCAATGATTGGTTCTCACAAGTTGGCCGCATTTGGTGGTGCTTTAAAATTATATTCTTTCTTACGTCATGGACTGATACAACTTTTTTATTTGTTCTGGTTTTATCCAATGTACATTTTCAGCTTCATTCTGAGCAATATCTGGTACAATGATATTGCTAAACATGGCTTTGCTGCAATGGGACAATCTGAGCCAACCGCAGTGGACTCCTCAGGACTAAACGATGGATCTTCCAATGCTGCTCAAACAGGAAAATCAATTGGATTGGGGAGGGTTGTAATAGGAATAGGAGAGCAGCTATATTCTCTACTTCTGATCAACTCCTTCTTCCTTGAGGTCTATGCTACAGGTTTCTTGCCTTTCGTGGGAAAGACACTCAATTTTATGCTTCTTTCTTGGATGTACGCCTACTATTGTTTTGAGTACAAGTGGAATCTTTCAGAAGTGAGTCTGGATAGAAGGCTGGACTTTTTCGAGTCTAACTGGGCTTTCTTTGCTGGTTTTGGTAGTCCTTGCGTTCTTGCGATATTTTTCTTCTCACCACTTGTGAGCTATGGAGTAATGGCTATCTTATTTCCACTGTTTGTTCTGACAGCCACGGGCTCAGTTGCTGAGAAGGATATTTATTCACAGAGAACAACTTGGAAATGTGCAGGACTGGGAAGGCTTCCAATTTTCTATGCTGCAAATACATTGTCGATGAAGCTCTTGACTCTCTTCCCTCATGAATCACAAGAAAAGATGCAGCAAAACAAGGAACTATAA
BLAST of CmoCh04G019540 vs. Swiss-Prot
Match: EI24_ARATH (Protein EI24 homolog OS=Arabidopsis thaliana GN=At4g06676 PE=2 SV=1) HSP 1 Score: 397.1 bits (1019), Expect = 1.9e-109 Identity = 206/320 (64.38%), Postives = 249/320 (77.81%), Query Frame = 1
BLAST of CmoCh04G019540 vs. Swiss-Prot
Match: EI24_DICDI (Protein EI24 homolog OS=Dictyostelium discoideum GN=DDB_G0284253 PE=3 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 8.7e-22 Identity = 84/324 (25.93%), Postives = 154/324 (47.53%), Query Frame = 1
BLAST of CmoCh04G019540 vs. Swiss-Prot
Match: EI24_BOVIN (Etoposide-induced protein 2.4 homolog OS=Bos taurus GN=EI24 PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.7e-15 Identity = 70/242 (28.93%), Postives = 113/242 (46.69%), Query Frame = 1
BLAST of CmoCh04G019540 vs. Swiss-Prot
Match: EI24_CAEEL (Ectopic P granules protein 4 OS=Caenorhabditis elegans GN=epg-4 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 6.0e-07 Identity = 43/165 (26.06%), Postives = 80/165 (48.48%), Query Frame = 1
BLAST of CmoCh04G019540 vs. TrEMBL
Match: A0A0A0KPW5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G587090 PE=4 SV=1) HSP 1 Score: 600.5 bits (1547), Expect = 1.2e-168 Identity = 307/338 (90.83%), Postives = 319/338 (94.38%), Query Frame = 1
BLAST of CmoCh04G019540 vs. TrEMBL
Match: D7TGV8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g00700 PE=4 SV=1) HSP 1 Score: 464.2 bits (1193), Expect = 1.4e-127 Identity = 233/327 (71.25%), Postives = 268/327 (81.96%), Query Frame = 1
BLAST of CmoCh04G019540 vs. TrEMBL
Match: B9N0B7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s23100g PE=4 SV=1) HSP 1 Score: 452.2 bits (1162), Expect = 5.5e-124 Identity = 232/339 (68.44%), Postives = 274/339 (80.83%), Query Frame = 1
BLAST of CmoCh04G019540 vs. TrEMBL
Match: A0A0D2V637_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G166600 PE=4 SV=1) HSP 1 Score: 450.7 bits (1158), Expect = 1.6e-123 Identity = 224/339 (66.08%), Postives = 270/339 (79.65%), Query Frame = 1
BLAST of CmoCh04G019540 vs. TrEMBL
Match: M5XF14_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008814mg PE=4 SV=1) HSP 1 Score: 445.7 bits (1145), Expect = 5.1e-122 Identity = 224/318 (70.44%), Postives = 261/318 (82.08%), Query Frame = 1
BLAST of CmoCh04G019540 vs. TAIR10
Match: AT4G06676.1 (AT4G06676.1 Etoposide-induced 2.4 (InterPro:IPR009890)) HSP 1 Score: 397.1 bits (1019), Expect = 1.1e-110 Identity = 206/320 (64.38%), Postives = 249/320 (77.81%), Query Frame = 1
BLAST of CmoCh04G019540 vs. NCBI nr
Match: gi|659090393|ref|XP_008445992.1| (PREDICTED: protein EI24 homolog [Cucumis melo]) HSP 1 Score: 615.5 bits (1586), Expect = 5.4e-173 Identity = 309/337 (91.69%), Postives = 323/337 (95.85%), Query Frame = 1
BLAST of CmoCh04G019540 vs. NCBI nr
Match: gi|778704487|ref|XP_004135349.2| (PREDICTED: protein EI24 homolog [Cucumis sativus]) HSP 1 Score: 600.5 bits (1547), Expect = 1.8e-168 Identity = 307/338 (90.83%), Postives = 319/338 (94.38%), Query Frame = 1
BLAST of CmoCh04G019540 vs. NCBI nr
Match: gi|700196461|gb|KGN51638.1| (hypothetical protein Csa_5G587090 [Cucumis sativus]) HSP 1 Score: 600.5 bits (1547), Expect = 1.8e-168 Identity = 307/338 (90.83%), Postives = 319/338 (94.38%), Query Frame = 1
BLAST of CmoCh04G019540 vs. NCBI nr
Match: gi|1000946915|ref|XP_015580744.1| (PREDICTED: protein EI24 homolog isoform X1 [Ricinus communis]) HSP 1 Score: 485.7 bits (1249), Expect = 6.4e-134 Identity = 245/340 (72.06%), Postives = 289/340 (85.00%), Query Frame = 1
BLAST of CmoCh04G019540 vs. NCBI nr
Match: gi|802562952|ref|XP_012066640.1| (PREDICTED: protein EI24 homolog [Jatropha curcas]) HSP 1 Score: 477.6 bits (1228), Expect = 1.8e-131 Identity = 242/340 (71.18%), Postives = 283/340 (83.24%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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