CmoCh04G018600 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G018600
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Plant intracellular ras group-related LRR 3, putative
Location	Cmo_Chr04 : 9332666 .. 9332926 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCATAAGGTGTTGATTCTCAGAGGTAATTTCAACAACTTGACTGAGGTTCCTGAATCAACCAGTGATCTCTGCAACCTAAGGGAGCTAGATCTTAGTGATAACCAAATAAGAGCTCTTCTAGACAGATTTGGCCGGCTGAAAAAAGTAATCAAGTTGATTATGGATCAAAATCCGCGTCTGATTTCTCCAATGGGAAATGTTGACAAAGGGGCCCAAGCGGTGAAGGATTTCATGGACATTGGAAGGGCGATTTAG

mRNA sequence

ATGAGTCATAAGGTGTTGATTCTCAGAGGTAATTTCAACAACTTGACTGAGGTTCCTGAATCAACCAGTGATCTCTGCAACCTAAGGGAGCTAGATCTTAGTGATAACCAAATAAGAGCTCTTCTAGACAGATTTGGCCGGCTGAAAAAAGTAATCAAGTTGATTATGGATCAAAATCCGCGTCTGATTTCTCCAATGGGAAATGTTGACAAAGGGGCCCAAGCGGTGAAGGATTTCATGGACATTGGAAGGGCGATTTAG

Coding sequence (CDS)

ATGAGTCATAAGGTGTTGATTCTCAGAGGTAATTTCAACAACTTGACTGAGGTTCCTGAATCAACCAGTGATCTCTGCAACCTAAGGGAGCTAGATCTTAGTGATAACCAAATAAGAGCTCTTCTAGACAGATTTGGCCGGCTGAAAAAAGTAATCAAGTTGATTATGGATCAAAATCCGCGTCTGATTTCTCCAATGGGAAATGTTGACAAAGGGGCCCAAGCGGTGAAGGATTTCATGGACATTGGAAGGGCGATTTAG

Homology

[Close]

BLAST of CmoCh04G018600 vs. Swiss-Prot
Match: PIRL3_ORYSJ (Plant intracellular Ras-group-related LRR protein 3 OS=Oryza sativa subsp. japonica GN=IRL3 PE=2 SV=3)

HSP 1 Score: 84.0 bits (206), Expect = 9.0e-16
Identity = 43/79 (54.43%), Postives = 57/79 (72.15%), Query Frame = 1


Query: 2   SHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPR 61
           S ++L L  NF++L ++P S  DL NLRELDLS+NQI AL D FGRL K+ KL ++QNP 
Sbjct: 302 SLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQIHALPDNFGRLDKLEKLNLEQNPL 361

Query: 62  LISPMGNVDKGAQAVKDFM 81
            + PM  V+KG  AVK++M
Sbjct: 362 SMPPMEIVNKGVDAVKEYM 380

[Close]

BLAST of CmoCh04G018600 vs. Swiss-Prot
Match: PIRL3_ARATH (Plant intracellular Ras-group-related LRR protein 3 OS=Arabidopsis thaliana GN=PIRL3 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 5.8e-15
Identity = 41/77 (53.25%), Postives = 57/77 (74.03%), Query Frame = 1


Query: 4   KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLI 63
           +V+ L  NF++L E+P++ SDL NLRELDLS+NQIR L D F RL+K+ KL +DQNP   
Sbjct: 326 EVMNLSSNFSDLIELPDTISDLANLRELDLSNNQIRVLPDSFFRLEKLEKLNLDQNPLEY 385

Query: 64  SPMGNVDKGAQAVKDFM 81
            P   V++ A+AV++FM
Sbjct: 386 PPQEMVNQSAEAVREFM 402

[Close]

BLAST of CmoCh04G018600 vs. Swiss-Prot
Match: PIRL2_ARATH (Plant intracellular Ras-group-related LRR protein 2 OS=Arabidopsis thaliana GN=PIRL2 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.2e-14
Identity = 41/77 (53.25%), Postives = 55/77 (71.43%), Query Frame = 1


Query: 4   KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLI 63
           +VL L  NFNNL  VP++ +DL NLRELDLS+NQI+A+ D F RL+K+ KL +DQNP  I
Sbjct: 325 EVLNLSSNFNNLMGVPDTITDLTNLRELDLSNNQIQAIPDSFYRLRKLEKLNLDQNPLEI 384

Query: 64  SPMGNVDKGAQAVKDFM 81
                  +GA+ V++FM
Sbjct: 385 PSQEVATQGAEVVREFM 401

[Close]

BLAST of CmoCh04G018600 vs. Swiss-Prot
Match: PIRL2_ORYSJ (Plant intracellular Ras-group-related LRR protein 2 OS=Oryza sativa subsp. japonica GN=IRL2 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.5e-12
Identity = 37/75 (49.33%), Postives = 51/75 (68.00%), Query Frame = 1


Query: 6   LILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISP 65
           L L  NF+++ ++P S  DL  LRELDLS+NQI AL D FGRL+++ +L +DQNP  + P
Sbjct: 358 LNLSSNFSDMRDLPASFGDLLGLRELDLSNNQIHALPDCFGRLQRLERLRLDQNPLAVPP 417

Query: 66  MGNVDKGAQAVKDFM 81
              V  G  AVK++M
Sbjct: 418 KEVVAGGVGAVKEYM 432

[Close]

BLAST of CmoCh04G018600 vs. Swiss-Prot
Match: PIRL9_ARATH (Plant intracellular Ras-group-related LRR protein 9 OS=Arabidopsis thaliana GN=PIRL9 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.3e-11
Identity = 36/75 (48.00%), Postives = 51/75 (68.00%), Query Frame = 1


Query: 6   LILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISP 65
           L L  NF++L ++P S  +L +L+ELDLS+NQI AL D FG L  + KL +DQNP ++ P
Sbjct: 365 LNLSSNFSDLKDLPFSFGELISLQELDLSNNQIHALPDTFGTLDSLTKLNVDQNPLVVPP 424

Query: 66  MGNVDKGAQAVKDFM 81
              V +G +AVK +M
Sbjct: 425 EEVVKEGVEAVKTYM 439

[Close]

BLAST of CmoCh04G018600 vs. TrEMBL
Match: A0A0A0KQ50_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G598610 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 8.8e-26
Identity = 62/81 (76.54%), Postives = 71/81 (87.65%), Query Frame = 1


Query: 2   SHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPR 61
           S +VL L GNFNNLTEVPES SDLCNL+ELDLSDNQI+AL DRFGRL+K+++L MDQNP 
Sbjct: 357 SLEVLNLSGNFNNLTEVPESMSDLCNLKELDLSDNQIKALPDRFGRLEKLLRLNMDQNPL 416

Query: 62  LISPMGNVDKGAQAVKDFMDI 83
           +I PM  VDKGAQAVKDFMD+
Sbjct: 417 VIPPMEIVDKGAQAVKDFMDM 437

[Close]

BLAST of CmoCh04G018600 vs. TrEMBL
Match: A0A067H3I1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012694mg PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 7.4e-17
Identity = 48/77 (62.34%), Postives = 60/77 (77.92%), Query Frame = 1


Query: 4   KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLI 63
           +VL L  NFN+LTE+PE+  DL NLRELDLS+NQIRAL D F RL+ + KL +DQNP +I
Sbjct: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374

Query: 64  SPMGNVDKGAQAVKDFM 81
            PM  V+KG +AVK+FM
Sbjct: 375 PPMEIVNKGVEAVKEFM 391

[Close]

BLAST of CmoCh04G018600 vs. TrEMBL
Match: V4TNS2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031488mg PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 7.4e-17
Identity = 48/77 (62.34%), Postives = 60/77 (77.92%), Query Frame = 1


Query: 4   KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLI 63
           +VL L  NFN+LTE+PE+  DL NLRELDLS+NQIRAL D F RL+ + KL +DQNP +I
Sbjct: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374

Query: 64  SPMGNVDKGAQAVKDFM 81
            PM  V+KG +AVK+FM
Sbjct: 375 PPMEIVNKGVEAVKEFM 391

[Close]

BLAST of CmoCh04G018600 vs. TrEMBL
Match: A0A0D2NEM1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G178200 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.3e-16
Identity = 46/77 (59.74%), Postives = 60/77 (77.92%), Query Frame = 1


Query: 4   KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLI 63
           +VL L  NFN+ TE+P++ SDL NLRELDLS+NQIRAL   FGRL K++KL +DQNP ++
Sbjct: 326 EVLNLSSNFNDFTELPDTISDLTNLRELDLSNNQIRALPCTFGRLGKLVKLNLDQNPLIV 385

Query: 64  SPMGNVDKGAQAVKDFM 81
            P+   +KGA AVKD+M
Sbjct: 386 PPIEIANKGADAVKDYM 402

[Close]

BLAST of CmoCh04G018600 vs. TrEMBL
Match: A0A0D2RNH3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G178200 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.3e-16
Identity = 46/77 (59.74%), Postives = 60/77 (77.92%), Query Frame = 1


Query: 4   KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLI 63
           +VL L  NFN+ TE+P++ SDL NLRELDLS+NQIRAL   FGRL K++KL +DQNP ++
Sbjct: 320 EVLNLSSNFNDFTELPDTISDLTNLRELDLSNNQIRALPCTFGRLGKLVKLNLDQNPLIV 379

Query: 64  SPMGNVDKGAQAVKDFM 81
            P+   +KGA AVKD+M
Sbjct: 380 PPIEIANKGADAVKDYM 396

[Close]

BLAST of CmoCh04G018600 vs. TAIR10
Match: AT1G12970.1 (AT1G12970.1 plant intracellular ras group-related LRR 3)

HSP 1 Score: 81.3 bits (199), Expect = 3.3e-16
Identity = 41/77 (53.25%), Postives = 57/77 (74.03%), Query Frame = 1


Query: 4   KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLI 63
           +V+ L  NF++L E+P++ SDL NLRELDLS+NQIR L D F RL+K+ KL +DQNP   
Sbjct: 326 EVMNLSSNFSDLIELPDTISDLANLRELDLSNNQIRVLPDSFFRLEKLEKLNLDQNPLEY 385

Query: 64  SPMGNVDKGAQAVKDFM 81
            P   V++ A+AV++FM
Sbjct: 386 PPQEMVNQSAEAVREFM 402

[Close]

BLAST of CmoCh04G018600 vs. TAIR10
Match: AT3G26500.1 (AT3G26500.1 plant intracellular ras group-related LRR 2)

HSP 1 Score: 79.3 bits (194), Expect = 1.3e-15
Identity = 41/77 (53.25%), Postives = 55/77 (71.43%), Query Frame = 1


Query: 4   KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLI 63
           +VL L  NFNNL  VP++ +DL NLRELDLS+NQI+A+ D F RL+K+ KL +DQNP  I
Sbjct: 325 EVLNLSSNFNNLMGVPDTITDLTNLRELDLSNNQIQAIPDSFYRLRKLEKLNLDQNPLEI 384

Query: 64  SPMGNVDKGAQAVKDFM 81
                  +GA+ V++FM
Sbjct: 385 PSQEVATQGAEVVREFM 401

[Close]

BLAST of CmoCh04G018600 vs. TAIR10
Match: AT3G11330.1 (AT3G11330.1 plant intracellular ras group-related LRR 9)

HSP 1 Score: 70.1 bits (170), Expect = 7.6e-13
Identity = 36/75 (48.00%), Postives = 51/75 (68.00%), Query Frame = 1


Query: 6   LILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISP 65
           L L  NF++L ++P S  +L +L+ELDLS+NQI AL D FG L  + KL +DQNP ++ P
Sbjct: 365 LNLSSNFSDLKDLPFSFGELISLQELDLSNNQIHALPDTFGTLDSLTKLNVDQNPLVVPP 424

Query: 66  MGNVDKGAQAVKDFM 81
              V +G +AVK +M
Sbjct: 425 EEVVKEGVEAVKTYM 439

[Close]

BLAST of CmoCh04G018600 vs. TAIR10
Match: AT5G05850.1 (AT5G05850.1 plant intracellular ras group-related LRR 1)

HSP 1 Score: 69.3 bits (168), Expect = 1.3e-12
Identity = 36/75 (48.00%), Postives = 50/75 (66.67%), Query Frame = 1


Query: 6   LILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLISP 65
           L L  NF++L ++P S  DL +L+ELDLS+NQI +L D FG L  + KL +DQNP ++ P
Sbjct: 371 LNLSSNFSDLQDLPASFGDLISLQELDLSNNQIHSLPDAFGTLVNLTKLNLDQNPLVVPP 430

Query: 66  MGNVDKGAQAVKDFM 81
              V +G  AVK +M
Sbjct: 431 DEVVKQGVDAVKMYM 445

[Close]

BLAST of CmoCh04G018600 vs. TAIR10
Match: AT4G26050.1 (AT4G26050.1 plant intracellular ras group-related LRR 8)

HSP 1 Score: 55.1 bits (131), Expect = 2.5e-08
Identity = 30/77 (38.96%), Postives = 47/77 (61.04%), Query Frame = 1


Query: 4   KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLI 63
           +VL +  NF +LT +P S   L +L ELD+S N I  L D  G L+++ KL ++ NP + 
Sbjct: 223 QVLNVSQNFQHLTTLPYSVGLLISLVELDVSYNGITVLPDSLGCLRRIQKLSVEGNPLIS 282

Query: 64  SPMGNVDKGAQAVKDFM 81
            P   V++G +A+K +M
Sbjct: 283 PPFEVVEQGLEALKQYM 299

[Close]

BLAST of CmoCh04G018600 vs. NCBI nr
Match: gi|449434977|ref|XP_004135272.1| (PREDICTED: plant intracellular Ras-group-related LRR protein 3 [Cucumis sativus])

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-25
Identity = 62/81 (76.54%), Postives = 71/81 (87.65%), Query Frame = 1


Query: 2   SHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPR 61
           S +VL L GNFNNLTEVPES SDLCNL+ELDLSDNQI+AL DRFGRL+K+++L MDQNP 
Sbjct: 357 SLEVLNLSGNFNNLTEVPESMSDLCNLKELDLSDNQIKALPDRFGRLEKLLRLNMDQNPL 416

Query: 62  LISPMGNVDKGAQAVKDFMDI 83
           +I PM  VDKGAQAVKDFMD+
Sbjct: 417 VIPPMEIVDKGAQAVKDFMDM 437

[Close]

BLAST of CmoCh04G018600 vs. NCBI nr
Match: gi|659090709|ref|XP_008446159.1| (PREDICTED: plant intracellular Ras-group-related LRR protein 3 [Cucumis melo])

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-25
Identity = 62/81 (76.54%), Postives = 71/81 (87.65%), Query Frame = 1


Query: 2   SHKVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPR 61
           S +VL L GNFNNLTEVPES SDLCNL+ELDLSDNQI+AL DRFGRL+K+++L MDQNP 
Sbjct: 357 SLEVLNLSGNFNNLTEVPESISDLCNLKELDLSDNQIKALPDRFGRLEKLMRLNMDQNPL 416

Query: 62  LISPMGNVDKGAQAVKDFMDI 83
           +I PM  VDKGAQAVKDFMD+
Sbjct: 417 VIPPMEIVDKGAQAVKDFMDM 437

[Close]

BLAST of CmoCh04G018600 vs. NCBI nr
Match: gi|641863540|gb|KDO82226.1| (hypothetical protein CISIN_1g012694mg [Citrus sinensis])

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-16
Identity = 48/77 (62.34%), Postives = 60/77 (77.92%), Query Frame = 1


Query: 4   KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLI 63
           +VL L  NFN+LTE+PE+  DL NLRELDLS+NQIRAL D F RL+ + KL +DQNP +I
Sbjct: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374

Query: 64  SPMGNVDKGAQAVKDFM 81
            PM  V+KG +AVK+FM
Sbjct: 375 PPMEIVNKGVEAVKEFM 391

[Close]

BLAST of CmoCh04G018600 vs. NCBI nr
Match: gi|567891481|ref|XP_006438261.1| (hypothetical protein CICLE_v10031488mg [Citrus clementina])

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-16
Identity = 48/77 (62.34%), Postives = 60/77 (77.92%), Query Frame = 1


Query: 4   KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLI 63
           +VL L  NFN+LTE+PE+  DL NLRELDLS+NQIRAL D F RL+ + KL +DQNP +I
Sbjct: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374

Query: 64  SPMGNVDKGAQAVKDFM 81
            PM  V+KG +AVK+FM
Sbjct: 375 PPMEIVNKGVEAVKEFM 391

[Close]

BLAST of CmoCh04G018600 vs. NCBI nr
Match: gi|568860896|ref|XP_006483949.1| (PREDICTED: plant intracellular Ras-group-related LRR protein 3 [Citrus sinensis])

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-16
Identity = 48/77 (62.34%), Postives = 60/77 (77.92%), Query Frame = 1


Query: 4   KVLILRGNFNNLTEVPESTSDLCNLRELDLSDNQIRALLDRFGRLKKVIKLIMDQNPRLI 63
           +VL L  NFN+LTE+PE+  DL NLRELDLS+NQIRAL D F RL+ + KL +DQNP +I
Sbjct: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374

Query: 64  SPMGNVDKGAQAVKDFM 81
            PM  V+KG +AVK+FM
Sbjct: 375 PPMEIVNKGVEAVKEFM 391

The following BLAST results are available for this feature:

BLAST of CmoCh04G018600 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PIRL3_ORYSJ	9.0e-16	54.43	Plant intracellular Ras-group-related LRR protein 3 OS=Oryza sativa subsp. japon...	[more]
PIRL3_ARATH	5.8e-15	53.25	Plant intracellular Ras-group-related LRR protein 3 OS=Arabidopsis thaliana GN=P...	[more]
PIRL2_ARATH	2.2e-14	53.25	Plant intracellular Ras-group-related LRR protein 2 OS=Arabidopsis thaliana GN=P...	[more]
PIRL2_ORYSJ	3.5e-12	49.33	Plant intracellular Ras-group-related LRR protein 2 OS=Oryza sativa subsp. japon...	[more]
PIRL9_ARATH	1.3e-11	48.00	Plant intracellular Ras-group-related LRR protein 9 OS=Arabidopsis thaliana GN=P...	[more]

BLAST of CmoCh04G018600 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQ50_CUCSA	8.8e-26	76.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G598610 PE=4 SV=1	[more]
A0A067H3I1_CITSI	7.4e-17	62.34	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012694mg PE=4 SV=1	[more]
V4TNS2_9ROSI	7.4e-17	62.34	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031488mg PE=4 SV=1	[more]
A0A0D2NEM1_GOSRA	1.3e-16	59.74	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G178200 PE=4 SV=1	[more]
A0A0D2RNH3_GOSRA	1.3e-16	59.74	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G178200 PE=4 SV=1	[more]

BLAST of CmoCh04G018600 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G12970.1	3.3e-16	53.25	plant intracellular ras group-related LRR 3	[more]
AT3G26500.1	1.3e-15	53.25	plant intracellular ras group-related LRR 2	[more]
AT3G11330.1	7.6e-13	48.00	plant intracellular ras group-related LRR 9	[more]
AT5G05850.1	1.3e-12	48.00	plant intracellular ras group-related LRR 1	[more]
AT4G26050.1	2.5e-08	38.96	plant intracellular ras group-related LRR 8	[more]

BLAST of CmoCh04G018600 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449434977\|ref\|XP_004135272.1\|	1.3e-25	76.54	PREDICTED: plant intracellular Ras-group-related LRR protein 3 [Cucumis sativus]	[more]
gi\|659090709\|ref\|XP_008446159.1\|	1.6e-25	76.54	PREDICTED: plant intracellular Ras-group-related LRR protein 3 [Cucumis melo]	[more]
gi\|641863540\|gb\|KDO82226.1\|	1.1e-16	62.34	hypothetical protein CISIN_1g012694mg [Citrus sinensis]	[more]
gi\|567891481\|ref\|XP_006438261.1\|	1.1e-16	62.34	hypothetical protein CICLE_v10031488mg [Citrus clementina]	[more]
gi\|568860896\|ref\|XP_006483949.1\|	1.1e-16	62.34	PREDICTED: plant intracellular Ras-group-related LRR protein 3 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001611	Leu-rich_rpt

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0006470	protein dephosphorylation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0004721	phosphoprotein phosphatase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G018600.1	CmoCh04G018600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001611	Leucine-rich repeat	PROFILE	PS51450	LRR	coord: 27..49 score: 7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G018600	Lsi04G005930	Bottle gourd (USVL1VR-Ls)	cmolsiB661
CmoCh04G018600	Cp4.1LG09g05330	Cucurbita pepo (Zucchini)	cmocpeB646
CmoCh04G018600	MELO3C011948.2	Melon (DHL92) v3.6.1	cmomedB721
CmoCh04G018600	CsaV3_5G031080	Cucumber (Chinese Long) v3	cmocucB0875
CmoCh04G018600	Cla97C05G108010	Watermelon (97103) v2	cmowmbB730
CmoCh04G018600	Bhi07G001434	Wax gourd	cmowgoB0890
CmoCh04G018600	CsGy5G021720	Cucumber (Gy14) v2	cgybcmoB653
CmoCh04G018600	Carg14498	Silver-seed gourd	carcmoB0985

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G018600	CmoCh18G007690	Cucurbita moschata (Rifu)	cmocmoB341

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G018600	Melon (DHL92) v3.6.1	cmomedB761
CmoCh04G018600	Silver-seed gourd	carcmoB0343
CmoCh04G018600	Silver-seed gourd	carcmoB0685
CmoCh04G018600	Silver-seed gourd	carcmoB0858
CmoCh04G018600	Cucumber (Chinese Long) v3	cmocucB0808
CmoCh04G018600	Watermelon (97103) v2	cmowmbB763
CmoCh04G018600	Wax gourd	cmowgoB0861
CmoCh04G018600	Cucurbita moschata (Rifu)	cmocmoB472
CmoCh04G018600	Cucumber (Gy14) v1	cgycmoB0794
CmoCh04G018600	Cucumber (Gy14) v1	cgycmoB1092
CmoCh04G018600	Cucurbita maxima (Rimu)	cmacmoB189
CmoCh04G018600	Cucurbita maxima (Rimu)	cmacmoB422
CmoCh04G018600	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G018600	Cucurbita maxima (Rimu)	cmacmoB785
CmoCh04G018600	Wild cucumber (PI 183967)	cmocpiB693
CmoCh04G018600	Wild cucumber (PI 183967)	cmocpiB748
CmoCh04G018600	Cucumber (Chinese Long) v2	cmocuB682
CmoCh04G018600	Cucumber (Chinese Long) v2	cmocuB739
CmoCh04G018600	Melon (DHL92) v3.5.1	cmomeB632
CmoCh04G018600	Melon (DHL92) v3.5.1	cmomeB673
CmoCh04G018600	Watermelon (Charleston Gray)	cmowcgB655
CmoCh04G018600	Watermelon (Charleston Gray)	cmowcgB683
CmoCh04G018600	Watermelon (97103) v1	cmowmB666
CmoCh04G018600	Watermelon (97103) v1	cmowmB694
CmoCh04G018600	Cucurbita pepo (Zucchini)	cmocpeB656
CmoCh04G018600	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G018600	Bottle gourd (USVL1VR-Ls)	cmolsiB698
CmoCh04G018600	Cucumber (Gy14) v2	cgybcmoB232