CmoCh04G018100 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G018100
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRNA-binding protein 25
LocationCmo_Chr04 : 9119602 .. 9124988 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTACTTTCCTCCCTTTGTAGTCTTCTAGGGCAAAGCATACTCCAATTACCTGTTCGTCGGAAAATCTGGAAGATAAGCCTGGAAGCTTTCAACTTCCTCGCGATCTTTTTTCTACTTCAATGGCGGACTCCTCCTCCTCATCCCCTGCGACACTCGATTCAAATCCTCAAGCTGCCGAGCCTGAAAACCCAAATTCCCAGGCCAACAAAGCCGAATCTGCCGCTTCTTCTTTTCCTCCACCGCAATCACTACCACCAACATCGCTTTCTGTCGGAATGAACCCTACCATGCATTCACCCTTGGTGTCAACGCCGCAACCACCTCCTTCTTTATCGTATGTCGCGGCGGGCGTTCCTCCGACAGCTCCGTCTTTTCGGCCGGTTCCTTTCTCAGCTCATCAGTTCTCGCCCATGCCCGGCACTGGCATGCTGAATCCGAACTATTCTAATATTGGGGTTCAGCCTCCGGGTGTTGGCTCGGTTGCTGCGCCTGCTCCTGGTATGGCAAGTGGCGCTACGGGAGCTGTTCCAGTTCCAGTTCCAGTACCACAACCGATGATGGCTTATCAAGTTCCACCTGGTCAGATTCCGAATCCGGTGATGAGGCCGTACGCCACTATGCCAAATGGTTTCGCAGCTGTGCCAACTGCTACTCCTCAAGGGGCCTTTCCTATCCCTGGTGGGTTTTCTTTATCTCTATTGTTTCTAACATCTCAATTGCCAATGTGATTGTGTAATAATTTTAAGCCGTTCCTCTTATTTAGTATATGTCACTGTGTTGCTTGCAATTGTTAAGCATTCTGTTTGTTGACGTTGTCAATTACACCAGCTGCATTCGTTTCGAGTTTGTTAACAACTGTAATGATTCGAACTTCGAGTAAAAATTTACTTTGGTTTTCGTATGATTTGGACTTGAAAGTGTACAATTTTCTACGTGTTGGCGCAAAGTGTAAGTTACGGCATGTTATGATGCCTGGGAAAGAGTTTGCAAAATTAAGTTCGGAGTCTATTAAAAATTATCGTGTTGGTTAGATGAAGGGTATCGATGACAGGATGTTTTCTCCTACAGCGTCTTGTCTCTTGATTGAATACGGTGAGAAAGGTTGGAAGGCTTCATATTGCTTAGAGAACTCCCAACTACAACTCCTTTTTTGGTATGGTCATTCATATTTGCCTGTTATTCTTGTTTGCTTTCAGCAGTTTTCTTTTGAAAATGACTTTCTATTACTAAGCCCAGAGAGAACTTGGTATTTATAATATAATACTAGTTTAGCATTGAAGGAGCCCTTCCTTTTGCCCTGCTACATAATATACGGCTGTGTCATGTTTATTTACTAGGATTTTACTGGTAGTTATATTGGATACTGCCCCTGGATATTTGAATTGCCAGAAGCAGATCATGTTAGCACCTGAGTGTTCGTTCGCCTTGTTTCTAAGGTATCAAATTCTCTTAATTAAATTATTCTTGACATTTTCTTTGATTCCTTACTTTACACCATCGAGATCTAACAACTGGAAATTTGAGTGTGAATTTTGAGAACATGTAAATTTATTCTTTTTCAATCAATTATTGTGTGTTTGAGTTGCTCAAAGTGTTGTGCTTAATCATAAAATTCTGCTTTCGATGGACGGGATTTTGAGAAGGCTGCAGTTCAAGAGCAAGGTAAGACAAAATTTACGTAACAGTTTCAAGGAATTTGGTGCTATCATTTGAATGTTTTATCAGGTTATCTATGCATTCAGCTGGTGATAGTTTCCATTGCTATGCTGCCATCATTTATATGCTTTGGATTGTGGTAACGGCATCCATGAATTTCATCAATTATTCTTCTATATATTTTTAACAGCATTTGATGGTTAGATGTGAGCAGTCTGCCAATACTTTCTGATGCATTGGCTAGATATTTTTCTTCACTTGTGCAGGGGTTCCTCGATTTCCTTCCCCATATCATGCTATGATTAGGACACCCTTTCCTCCACGGCCACCTGGTGCTATGGGCATGGTTCCAGCTATGCCACGGCCTCCTGTTCCTGGGGTTCCTGGTGTTCATCCAATTATCCCTCCTGTGGTTAGGCCTGCTGTTCTCCCAAGCGTTACACCAGCCGAAAAACCACAAACTACGATTTACATTGGCCGAATTGCACAATCAGTGGGAAATGATTTCATGCTGTCCCTTCTTCAGGTAGATTAATCATTCTCCATGCATTCTTATTCTTTTTTCCCTTCGATTTAGTGGTCCATAATTAATATCCATCTGTTTCTTTTAGCTATGTGGACCAGTGAAGAGCTGGAAACGAGCCCAAGATCCTACGGATGGAACTCCTAGAACCTTTGGATTCTGCGAGTTTGAGTCTGCTGAAGGTGTTCTTCGTGCTCTACGATTACTGACAAAGTTAAACATTGATGGACAAGAACTCGTGGTATGATGGGATAGGTTAGAATCAAATTGTTTATTTTATTTTTAGATGGATATATCTTGTTGTAGTCTCATTTTTAAGAGTAGAAAATCCAGTCATAATTAAGGTTGACCTCTGTGCTGCTTCCCCCCCACATTTATATTGTTTTCTATCACTAAATAAAACGAGTTTTTAATGGAGAATAAAAAAACAGTGCGTTGAGCTAATTTATTTTCATCCTTTCATATAGTGTCGCTTCATATATCGAAAATTGTGTTTTACTTTCTACTTTCAAGTTTCAGCTTATTTTAATGTTAATATATCATTCTTTTCAAATAAACAGCTAAAAGGTACTCAGGCAACAAGAGATTATCTTAAGCGTTATGTTGAGAAGAAAGCTGAGAACTCAAAGAAACAGGAAGAAACACAACTTTCAGAGACTAAGGTCGAAGAATCCGACACAGCAAATGTGGCTAAAAATGAAACTTCAAAGCCCCCTGCAGAGGATTCAAAGGAGGATCAGGATTCAGGGGAAAAAGAAGATCATTACATTGCCTGTTCTGCAGTTTTAAGTGATGAAGATAGAGATGCTGATCGAGCGGTATCGGAAAAACTTACAAATGCACTGGAGGAGAGGTTGAAGTCTAGACCTCTGCCACCACCTCCTCTACTGACAGCCACTGATGTCTCTGGTAATTCAAGTGCAGAACCATCTGTTAAAATGAAAGATGGTGAAGCTGACTCTGATATTTTGAGAAGTGGTGAGTGTTTGTAAGTTGGTTGTTAATCTTCTCTTTGTCACACGAAAATAAGCATTCACAATAGATATACAATGTTTATAGCGTGGTCTTTAGTTTATTACAAATAGTTTACGTTTCTTTCCAAATTTTTGAGTGTGCAAGTATTGGGTTGCTTAATTGTCGTTACCTCCTACAGATGCAGCTGAGGATAGAAATGATGATGACACGACTAGTGACAATAAACTAACTAGTGAGCATGACAAGCCTGAAACAAGCTCACCTGACAGAAGTAGAAGGTATGACAGGAGAAGTCGAGAACGAGACAGGGAGAGGGATCTGAAAAGGGACAAGGAGCGGGAAATTGAGAGATATGAAAGAGAGACAGAGCGGGAGCGAGCTAGGAAAGAGAGGGAACAAAGAAGAAAGTTTGAGGAGTCTGAGCGACAGTATGAAGAATGTCTTAAAGAATGGGAATATCGAGAAAGAGAGAGAGAAAAGCAAAGACAGTATGAGAAGGAGAGGGAGAAAGAGAAAGAGCGTAAAAGGAAGAAGGAGATATTGTATGATGAAGATGATGAGGATGATGATTCTAGAAGAAAATGGCGGCGAGGTGCTCTCGAGGAAAAGAGGAAGAAGAGGTCTAGAGAAAAGGAAGATGATTCGGTAGATAGACAGAAAGAGGAAGAAGAAATTGCTGAGGCCAAGAGGAAGGCTGAGGAGGAACAGCAGCTGAAACAGAAAGATCTACTGAACACTCAATCTGGTCAGATGACGAGTGTTGATGAGAAAACTGTTCTTGCTGAAGAATCCGCTAATGAGGTTGAGGTTATGGATTCTGAACGTGATCCTGAGCTTGATTGTAGCTGCGATAACTATACAGGTAACATGTCAACTGTGAGAAGTCTTCTTTTCTACTCGCATGTTCTATTACCCTGTGCTCTTGTTTTCTATTATTTTGATGACCTATCTGGTATGTGACAGGGGATGGGATCTTACAAAATGGTAGCGGTGATGAATTAAATACGACTCGACAGAGTGGAGGCTTGCCTGCGAAAAGATTAGGATTTGGTTTAGTGGGATCTGGAAAACGGACTGCTGTACCTTCCGTCTTTCATGAGGAGGATGATGAAGCACAGAAAGAGAAGAAGATGAGGCCACTGGTTCCAATTGATTACTCAGCTGAGGAACTCCAGGCTGTGCAACCTGCCAGTACTGGGGCTTTGCCGCCAAATTTAGCTGCAGCAGCGGAATTTGCAAAACGTATATCAAATGTTAATTCCAAAGAGGAGAAGCCTGACAGTGAACGGGAGCGAGGAAGGCGTTCCAATGAAAAGTCTAGTCGAGATAGAGACCGAAATGATGAGGAGGCCTATCGCAGCAAAGATGAGAACAAGACAATAGACAGAGACAGGGAGCGAGAGCCTGTTTTGGATAAAGTAAAAATACCTGATAACAAAAAGCTTTTGGACGCAAAACAGTTGATCGATATGATCCCAAAGACGAAGGAGGAGTTATTCTCATATGACATAAACTGGACTATTTACGAAAAGGTACCATGTCTCATGAATGATTTTCTTTTTCTTAGTTTATATATAGGTAACATTTTCTGTAAATTTAACACAACATTACGCTCGTTTTCTGCAGCATGCACTACACGAGAGAATGAGACCCTGGATTTCAAAAAAGATAACAGAGTTTTTAGGGGAGGAGGAAACTACTCTCGTCGATTACATTGTTTCAAGTACTCAGGAACACGTAAAGGCATCCCAAATGCTGGAGCTGCTTCAGTCAATTTTGGATGAAGAAGCTGAAATGTTTGTTCTGAAGATGTGGAGAATGCTGATCTTCGAAATAAAAAAGGTAGAAACTGGTCTAGCTTTCAGAACAAAAGCATGAGTTTGTAGTTTAGTTTTCAAAATGTGTCTCGACTGTCATTGGTGCTTTCCCTATACCAATATTTTCCACGGCTCTGAACTTTCAGGCCATTTCCTTAGAGGGTAAAACGGATCGCATCGCACTGTATGCGTTAGGTTCATTCTTTCTAGTACTTGAAACTTCGTCTCATTAGAGCTTGCACTTGTGTAGCTTAAAAAAAGGAAAGAAATTTGAATCAGCCATTTTTAGTTCAGTCTTGGCTCTTTAAGATGCTTCGTTTTGAAATTTTGAAGAGGAAAGCAGCAACTTCTGTATATTGTTTATGTGCCCATCTGAAAAACTGGAAGCAAATCTTTTGTGCAGTTTGAGCCGCAG

mRNA sequence

TTTACTTTCCTCCCTTTGTAGTCTTCTAGGGCAAAGCATACTCCAATTACCTGTTCGTCGGAAAATCTGGAAGATAAGCCTGGAAGCTTTCAACTTCCTCGCGATCTTTTTTCTACTTCAATGGCGGACTCCTCCTCCTCATCCCCTGCGACACTCGATTCAAATCCTCAAGCTGCCGAGCCTGAAAACCCAAATTCCCAGGCCAACAAAGCCGAATCTGCCGCTTCTTCTTTTCCTCCACCGCAATCACTACCACCAACATCGCTTTCTGTCGGAATGAACCCTACCATGCATTCACCCTTGGTGTCAACGCCGCAACCACCTCCTTCTTTATCGTATGTCGCGGCGGGCGTTCCTCCGACAGCTCCGTCTTTTCGGCCGGTTCCTTTCTCAGCTCATCAGTTCTCGCCCATGCCCGGCACTGGCATGCTGAATCCGAACTATTCTAATATTGGGGTTCAGCCTCCGGGTGTTGGCTCGGTTGCTGCGCCTGCTCCTGGTATGGCAAGTGGCGCTACGGGAGCTGTTCCAGTTCCAGTTCCAGTACCACAACCGATGATGGCTTATCAAGTTCCACCTGGTCAGATTCCGAATCCGGTGATGAGGCCGTACGCCACTATGCCAAATGGTTTCGCAGCTGTGCCAACTGCTACTCCTCAAGGGGCCTTTCCTATCCCTGTTATATTGGATACTGCCCCTGGATATTTGAATTGCCAGAAGCAGATCATGTTAGCACCTGAGTGTTCGTTCGCCTTGTTTCTAAGGTTATCTATGCATTCAGCTGGTGATAGTTTCCATTGCTATGCTGCCATCATTTATATGCTTTGGATTGTGATATTTTTCTTCACTTGTGCAGGGGTTCCTCGATTTCCTTCCCCATATCATGCTATGATTAGGACACCCTTTCCTCCACGGCCACCTGGTGCTATGGGCATGGTTCCAGCTATGCCACGGCCTCCTGTTCCTGGGGTTCCTGGTGTTCATCCAATTATCCCTCCTGTGGTTAGGCCTGCTGTTCTCCCAAGCGTTACACCAGCCGAAAAACCACAAACTACGATTTACATTGGCCGAATTGCACAATCAGTGGGAAATGATTTCATGCTGTCCCTTCTTCAGCTATGTGGACCAGTGAAGAGCTGGAAACGAGCCCAAGATCCTACGGATGGAACTCCTAGAACCTTTGGATTCTGCGAGTTTGAGTCTGCTGAAGGTGTTCTTCGTGCTCTACGATTACTGACAAAGTTAAACATTGATGGACAAGAACTCGTGCTAAAAGGTACTCAGGCAACAAGAGATTATCTTAAGCGTTATGTTGAGAAGAAAGCTGAGAACTCAAAGAAACAGGAAGAAACACAACTTTCAGAGACTAAGGTCGAAGAATCCGACACAGCAAATGTGGCTAAAAATGAAACTTCAAAGCCCCCTGCAGAGGATTCAAAGGAGGATCAGGATTCAGGGGAAAAAGAAGATCATTACATTGCCTGTTCTGCAGTTTTAAGTGATGAAGATAGAGATGCTGATCGAGCGGTATCGGAAAAACTTACAAATGCACTGGAGGAGAGGTTGAAGTCTAGACCTCTGCCACCACCTCCTCTACTGACAGCCACTGATGTCTCTGGTAATTCAAGTGCAGAACCATCTGTTAAAATGAAAGATGGTGAAGCTGACTCTGATATTTTGAGAAGTGATGCAGCTGAGGATAGAAATGATGATGACACGACTAGTGACAATAAACTAACTAGTGAGCATGACAAGCCTGAAACAAGCTCACCTGACAGAAGTAGAAGGTATGACAGGAGAAGTCGAGAACGAGACAGGGAGAGGGATCTGAAAAGGGACAAGGAGCGGGAAATTGAGAGATATGAAAGAGAGACAGAGCGGGAGCGAGCTAGGAAAGAGAGGGAACAAAGAAGAAAGTTTGAGGAGTCTGAGCGACAGTATGAAGAATGTCTTAAAGAATGGGAATATCGAGAAAGAGAGAGAGAAAAGCAAAGACAGTATGAGAAGGAGAGGGAGAAAGAGAAAGAGCGTAAAAGGAAGAAGGAGATATTGTATGATGAAGATGATGAGGATGATGATTCTAGAAGAAAATGGCGGCGAGGTGCTCTCGAGGAAAAGAGGAAGAAGAGGTCTAGAGAAAAGGAAGATGATTCGGTAGATAGACAGAAAGAGGAAGAAGAAATTGCTGAGGCCAAGAGGAAGGCTGAGGAGGAACAGCAGCTGAAACAGAAAGATCTACTGAACACTCAATCTGGTCAGATGACGAGTGTTGATGAGAAAACTGTTCTTGCTGAAGAATCCGCTAATGAGGTTGAGGTTATGGATTCTGAACGTGATCCTGAGCTTGATTGTAGCTGCGATAACTATACAGGGGATGGGATCTTACAAAATGGTAGCGGTGATGAATTAAATACGACTCGACAGAGTGGAGGCTTGCCTGCGAAAAGATTAGGATTTGGTTTAGTGGGATCTGGAAAACGGACTGCTGTACCTTCCGTCTTTCATGAGGAGGATGATGAAGCACAGAAAGAGAAGAAGATGAGGCCACTGGTTCCAATTGATTACTCAGCTGAGGAACTCCAGGCTGTGCAACCTGCCAGTACTGGGGCTTTGCCGCCAAATTTAGCTGCAGCAGCGGAATTTGCAAAACGTATATCAAATGTTAATTCCAAAGAGGAGAAGCCTGACAGTGAACGGGAGCGAGGAAGGCGTTCCAATGAAAAGTCTAGTCGAGATAGAGACCGAAATGATGAGGAGGCCTATCGCAGCAAAGATGAGAACAAGACAATAGACAGAGACAGGGAGCGAGAGCCTGTTTTGGATAAAGTAAAAATACCTGATAACAAAAAGCTTTTGGACGCAAAACAGTTGATCGATATGATCCCAAAGACGAAGGAGGAGTTATTCTCATATGACATAAACTGGACTATTTACGAAAAGCATGCACTACACGAGAGAATGAGACCCTGGATTTCAAAAAAGATAACAGAGTTTTTAGGGGAGGAGGAAACTACTCTCGTCGATTACATTGTTTCAAGTACTCAGGAACACGTAAAGGCATCCCAAATGCTGGAGCTGCTTCAGTCAATTTTGGATGAAGAAGCTGAAATGTTTGTTCTGAAGATGTGGAGAATGCTGATCTTCGAAATAAAAAAGGTAGAAACTGGTCTAGCTTTCAGAACAAAAGCATGAGTTTGTAGTTTAGTTTTCAAAATGTGTCTCGACTGTCATTGGTGCTTTCCCTATACCAATATTTTCCACGGCTCTGAACTTTCAGGCCATTTCCTTAGAGGGTAAAACGGATCGCATCGCACTGTATGCGTTAGGTTCATTCTTTCTAGTACTTGAAACTTCGTCTCATTAGAGCTTGCACTTGTGTAGCTTAAAAAAAGGAAAGAAATTTGAATCAGCCATTTTTAGTTCAGTCTTGGCTCTTTAAGATGCTTCGTTTTGAAATTTTGAAGAGGAAAGCAGCAACTTCTGTATATTGTTTATGTGCCCATCTGAAAAACTGGAAGCAAATCTTTTGTGCAGTTTGAGCCGCAG

Coding sequence (CDS)

ATGGCGGACTCCTCCTCCTCATCCCCTGCGACACTCGATTCAAATCCTCAAGCTGCCGAGCCTGAAAACCCAAATTCCCAGGCCAACAAAGCCGAATCTGCCGCTTCTTCTTTTCCTCCACCGCAATCACTACCACCAACATCGCTTTCTGTCGGAATGAACCCTACCATGCATTCACCCTTGGTGTCAACGCCGCAACCACCTCCTTCTTTATCGTATGTCGCGGCGGGCGTTCCTCCGACAGCTCCGTCTTTTCGGCCGGTTCCTTTCTCAGCTCATCAGTTCTCGCCCATGCCCGGCACTGGCATGCTGAATCCGAACTATTCTAATATTGGGGTTCAGCCTCCGGGTGTTGGCTCGGTTGCTGCGCCTGCTCCTGGTATGGCAAGTGGCGCTACGGGAGCTGTTCCAGTTCCAGTTCCAGTACCACAACCGATGATGGCTTATCAAGTTCCACCTGGTCAGATTCCGAATCCGGTGATGAGGCCGTACGCCACTATGCCAAATGGTTTCGCAGCTGTGCCAACTGCTACTCCTCAAGGGGCCTTTCCTATCCCTGTTATATTGGATACTGCCCCTGGATATTTGAATTGCCAGAAGCAGATCATGTTAGCACCTGAGTGTTCGTTCGCCTTGTTTCTAAGGTTATCTATGCATTCAGCTGGTGATAGTTTCCATTGCTATGCTGCCATCATTTATATGCTTTGGATTGTGATATTTTTCTTCACTTGTGCAGGGGTTCCTCGATTTCCTTCCCCATATCATGCTATGATTAGGACACCCTTTCCTCCACGGCCACCTGGTGCTATGGGCATGGTTCCAGCTATGCCACGGCCTCCTGTTCCTGGGGTTCCTGGTGTTCATCCAATTATCCCTCCTGTGGTTAGGCCTGCTGTTCTCCCAAGCGTTACACCAGCCGAAAAACCACAAACTACGATTTACATTGGCCGAATTGCACAATCAGTGGGAAATGATTTCATGCTGTCCCTTCTTCAGCTATGTGGACCAGTGAAGAGCTGGAAACGAGCCCAAGATCCTACGGATGGAACTCCTAGAACCTTTGGATTCTGCGAGTTTGAGTCTGCTGAAGGTGTTCTTCGTGCTCTACGATTACTGACAAAGTTAAACATTGATGGACAAGAACTCGTGCTAAAAGGTACTCAGGCAACAAGAGATTATCTTAAGCGTTATGTTGAGAAGAAAGCTGAGAACTCAAAGAAACAGGAAGAAACACAACTTTCAGAGACTAAGGTCGAAGAATCCGACACAGCAAATGTGGCTAAAAATGAAACTTCAAAGCCCCCTGCAGAGGATTCAAAGGAGGATCAGGATTCAGGGGAAAAAGAAGATCATTACATTGCCTGTTCTGCAGTTTTAAGTGATGAAGATAGAGATGCTGATCGAGCGGTATCGGAAAAACTTACAAATGCACTGGAGGAGAGGTTGAAGTCTAGACCTCTGCCACCACCTCCTCTACTGACAGCCACTGATGTCTCTGGTAATTCAAGTGCAGAACCATCTGTTAAAATGAAAGATGGTGAAGCTGACTCTGATATTTTGAGAAGTGATGCAGCTGAGGATAGAAATGATGATGACACGACTAGTGACAATAAACTAACTAGTGAGCATGACAAGCCTGAAACAAGCTCACCTGACAGAAGTAGAAGGTATGACAGGAGAAGTCGAGAACGAGACAGGGAGAGGGATCTGAAAAGGGACAAGGAGCGGGAAATTGAGAGATATGAAAGAGAGACAGAGCGGGAGCGAGCTAGGAAAGAGAGGGAACAAAGAAGAAAGTTTGAGGAGTCTGAGCGACAGTATGAAGAATGTCTTAAAGAATGGGAATATCGAGAAAGAGAGAGAGAAAAGCAAAGACAGTATGAGAAGGAGAGGGAGAAAGAGAAAGAGCGTAAAAGGAAGAAGGAGATATTGTATGATGAAGATGATGAGGATGATGATTCTAGAAGAAAATGGCGGCGAGGTGCTCTCGAGGAAAAGAGGAAGAAGAGGTCTAGAGAAAAGGAAGATGATTCGGTAGATAGACAGAAAGAGGAAGAAGAAATTGCTGAGGCCAAGAGGAAGGCTGAGGAGGAACAGCAGCTGAAACAGAAAGATCTACTGAACACTCAATCTGGTCAGATGACGAGTGTTGATGAGAAAACTGTTCTTGCTGAAGAATCCGCTAATGAGGTTGAGGTTATGGATTCTGAACGTGATCCTGAGCTTGATTGTAGCTGCGATAACTATACAGGGGATGGGATCTTACAAAATGGTAGCGGTGATGAATTAAATACGACTCGACAGAGTGGAGGCTTGCCTGCGAAAAGATTAGGATTTGGTTTAGTGGGATCTGGAAAACGGACTGCTGTACCTTCCGTCTTTCATGAGGAGGATGATGAAGCACAGAAAGAGAAGAAGATGAGGCCACTGGTTCCAATTGATTACTCAGCTGAGGAACTCCAGGCTGTGCAACCTGCCAGTACTGGGGCTTTGCCGCCAAATTTAGCTGCAGCAGCGGAATTTGCAAAACGTATATCAAATGTTAATTCCAAAGAGGAGAAGCCTGACAGTGAACGGGAGCGAGGAAGGCGTTCCAATGAAAAGTCTAGTCGAGATAGAGACCGAAATGATGAGGAGGCCTATCGCAGCAAAGATGAGAACAAGACAATAGACAGAGACAGGGAGCGAGAGCCTGTTTTGGATAAAGTAAAAATACCTGATAACAAAAAGCTTTTGGACGCAAAACAGTTGATCGATATGATCCCAAAGACGAAGGAGGAGTTATTCTCATATGACATAAACTGGACTATTTACGAAAAGCATGCACTACACGAGAGAATGAGACCCTGGATTTCAAAAAAGATAACAGAGTTTTTAGGGGAGGAGGAAACTACTCTCGTCGATTACATTGTTTCAAGTACTCAGGAACACGTAAAGGCATCCCAAATGCTGGAGCTGCTTCAGTCAATTTTGGATGAAGAAGCTGAAATGTTTGTTCTGAAGATGTGGAGAATGCTGATCTTCGAAATAAAAAAGGTAGAAACTGGTCTAGCTTTCAGAACAAAAGCATGA
Homology
[Close]
BLAST of CmoCh04G018100 vs. Swiss-Prot
Match: RBM25_MOUSE (RNA-binding protein 25 OS=Mus musculus GN=Rbm25 PE=1 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 3.3e-24
Identity = 225/862 (26.10%), Postives = 383/862 (44.43%), Query Frame = 1 

Query: 262  FPP---RPP-GAMGMVPAMPRPPVPG----VPGVHPIIP---PVVRPA---VLPSVTPAE 321
            FPP   RPP G   + P +P P  PG    VP   P+IP    ++ PA   ++P+V+   
Sbjct: 3    FPPHLNRPPMGIPALPPGIPPPQFPGFPPPVPPGTPMIPVPMSIMAPAPTVLVPTVSMVG 62

Query: 322  K---------------------PQTTIYIGRIAQSVGNDFMLSLLQLCGPVKSWKRAQDP 381
            K                     P TT+++G I++   +  +  LL  CG V SWKR Q  
Sbjct: 63   KHLGARKDHPGLKLKENDENCGPTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGA 122

Query: 382  TDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSK 441
            + G  + FGFCE++  E  LRALRLL  L I  ++L++K    T+  L  +  KK  N  
Sbjct: 123  S-GKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLDEWKAKKKANGN 182

Query: 442  KQEETQLSETKVEESDTANVAKNETSKPPAEDSKEDQDSGEKEDHYIACSAVLSDEDRDA 501
             + ET  +       D       ET +      ++    G  E      S+ L+   +++
Sbjct: 183  ARPETVTN-------DDEEALDEETKR------RDQMIKGAIEVLIREYSSELNAPSQES 242

Query: 502  DRAVSEKLTNALEE---RLKSRPLPPPPLLTATDVSGNSSAEPS---------------V 561
            D    +K     E+   R    PL P PL+T  D++     E                  
Sbjct: 243  DSHPRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINAIEMEEDKRDLISREISKFRDTHK 302

Query: 562  KMKDGEADSDILRSDAAEDRNDDDTTSDNKLTS---------EHDKPETSSPDRSRRYDR 621
            K+++ +   +  R +  ++R + +   + +            E ++ +    +R R  DR
Sbjct: 303  KLEEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDR 362

Query: 622  -RSRERDRERDLKRDKEREIERY-ERETERERARKEREQRRKFEESERQYEECLKEWEYR 681
             R R ++R+RD +RD++R+ ER  +R  +R R+R++   R +  E ER+ E   +    R
Sbjct: 363  DRDRTKERDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERER 422

Query: 682  EREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREKEDD 741
            ERERE++R+ E+E++K+++R        +ED+ED   RRK  R   E++   + R K  +
Sbjct: 423  EREREREREREREKDKKRDR--------EEDEEDAYERRKLERKLREKEAAYQERLKNWE 482

Query: 742  SVDRQKEEEEIAEAKRKAEEEQQL-KQKDLLNTQSGQMTSVDEKTVLAEESANEVEVMDS 801
              +R+K  E   EA+R+ E  +++ K+   L           +       SA +  + D 
Sbjct: 483  IRERKKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDR 542

Query: 802  ERDPELDCSCDNYTGDGILQNGSGDELNTTRQSGGLPAKRLGF-GLVGSGKRTAVPSVFH 861
            E++ E D        D   +    +E+     + G P        +    +R   P +  
Sbjct: 543  EKEMEAD------ERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQ 602

Query: 862  ----EEDDEAQKEKKMRPLVPIDYSAEELQ---------------AVQPASTGALPPNLA 921
                EE++E ++EK+ +   P++   E  Q               +V  AS  A P    
Sbjct: 603  EPESEEEEEEKQEKEEKREEPVEEEEEPEQKPCLKPTLRPISSAPSVSSASGNATPNTPG 662

Query: 922  AAAEFAKRISNVNS-KEEKPDSERERGRRSNEKSSRDRDRNDEEAYRSK----------- 981
              +     I + NS  +++P+  R +   S +  + +         R K           
Sbjct: 663  DESPCGIIIPHENSPDQQQPEEHRPKIGLSLKLGASNSPGQPNSVKRKKLPVDSVFNKFE 722

Query: 982  -DENKTIDRDREREPV--------LDKVKIPDNKKLLDAKQLIDMIPKTKEELFSYDINW 1018
             +++  + R R+  P+          K  +   +K    K LI+ IP  K ELF+Y ++W
Sbjct: 723  DEDSDDVPRKRKLVPLDYGEDDKNATKGTVNTEEKRKHIKSLIEKIPTAKPELFAYPLDW 782

[Close]
BLAST of CmoCh04G018100 vs. Swiss-Prot
Match: RBM25_HUMAN (RNA-binding protein 25 OS=Homo sapiens GN=RBM25 PE=1 SV=3)

HSP 1 Score: 114.4 bits (285), Expect = 7.4e-24
Identity = 231/867 (26.64%), Postives = 390/867 (44.98%), Query Frame = 1 

Query: 262  FPP---RPP-GAMGMVPAMPRPPVPG----VPGVHPIIP---PVVRPA---VLPSVTPAE 321
            FPP   RPP G   + P +P P  PG    VP   P+IP    ++ PA   ++P+V+   
Sbjct: 3    FPPHLNRPPMGIPALPPGIPPPQFPGFPPPVPPGTPMIPVPMSIMAPAPTVLVPTVSMVG 62

Query: 322  K---------------------PQTTIYIGRIAQSVGNDFMLSLLQLCGPVKSWKRAQDP 381
            K                     P TT+++G I++   +  +  LL  CG V SWKR Q  
Sbjct: 63   KHLGARKDHPGLKAKENDENCGPTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGA 122

Query: 382  TDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRY-VEKKAENS 441
            + G  + FGFCE++  E  LRALRLL  L I  ++L++K    T+  L  +  +KKA N 
Sbjct: 123  S-GKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLDEWKAKKKASNG 182

Query: 442  KKQEETQLSETKVEESDTANVAKNETSKPPAEDSKEDQDSGEKEDHYIACSAVLSDEDRD 501
              + ET  +       D       ET +      ++    G  E      S+ L+   ++
Sbjct: 183  NARPETVTN-------DDEEALDEETKR------RDQMIKGAIEVLIREYSSELNAPSQE 242

Query: 502  ADRAVSEKLTNALEE---RLKSRPLPPPPLLTATDVSGNSSAEPS--------------- 561
            +D    +K     E+   R    PL P PL+T  D++     E                 
Sbjct: 243  SDSHPRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINAIEMEEDKRDLISREISKFRDTH 302

Query: 562  VKMKDGEADSDILRSDAAEDRNDDDTTSDNKLTS---------EHDKPETSSPDRSRRYD 621
             K+++ +   +  R +  ++R + +   + +            E ++ +    +R R  D
Sbjct: 303  KKLEEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERD 362

Query: 622  R---RSRERDRERDLKRDKEREIERY-ERETERERARKEREQRRKFEESERQYE-ECLKE 681
            R   R++ERDR+RD +RD++R+ ER  +R  +R R+R++   R +  E ER+ E E  +E
Sbjct: 363  RDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERE 422

Query: 682  WEY-REREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSR 741
             E  RERERE++R+ E+E++K+++R        +ED+ED   RRK  R   E++   + R
Sbjct: 423  REREREREREREREREREKDKKRDR--------EEDEEDAYERRKLERKLREKEAAYQER 482

Query: 742  EKEDDSVDRQKEEEEIAEAKRKAEEEQQL-KQKDLLNTQSGQMTSVDEKTVLAEESANEV 801
             K  +  +R+K  E   EA+R+ E  +++ K+   L           +       SA + 
Sbjct: 483  LKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDPKYYRGSALQK 542

Query: 802  EVMDSERDPELDCSCDNYTGDGILQNGSGDELNTTRQSGGLPAKRLGF-GLVGSGKRTAV 861
             + D E++ E D        D   +    +E+     + G P        +    +R   
Sbjct: 543  RLRDREKEMEAD------ERDRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQ 602

Query: 862  PSVFH----EEDDEAQKEKKMRPLVPIDYSAEELQ---------------AVQPASTGAL 921
            P +      EE++E ++EK+ +   P++   E  Q               +V  AS  A 
Sbjct: 603  PQIKQEPESEEEEEEKQEKEEKREEPMEEEEEPEQKPCLKPTLRPISSAPSVSSASGNAT 662

Query: 922  PPNLAAAAEFAKRISNVNS-KEEKPDSERERGRRSNEKSSRDRDRNDEEAYRSK------ 981
            P      +     I + NS  +++P+  R +   S +  + +         R K      
Sbjct: 663  PNTPGDESPCGIIIPHENSPDQQQPEEHRPKIGLSLKLGASNSPGQPNSVKRKKLPVDSV 722

Query: 982  ------DENKTIDRDREREPV--------LDKVKIPDNKKLLDAKQLIDMIPKTKEELFS 1018
                  +++  + R R+  P+          K  +   +K    K LI+ IP  K ELF+
Sbjct: 723  FNKFEDEDSDDVPRKRKLVPLDYGEDDKNATKGTVNTEEKRKHIKSLIEKIPTAKPELFA 782

[Close]
BLAST of CmoCh04G018100 vs. TrEMBL
Match: E5GBJ9_CUCME (RNA binding motif protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 1207.2 bits (3122), Expect = 0.0e+00
Identity = 688/772 (89.12%), Postives = 713/772 (92.36%), Query Frame = 1 

Query: 257  MIRTPFPPRPPGAMGMVPAMPRPPVPGVPGVHPIIPPVVRPAVLPSVTPAEKPQTTIYIG 316
            MIR PFPPRPPGAMGMVPAMPRPP+PG+PGV PIIPPVVRPAVLPSVTPAEKPQTTIYIG
Sbjct: 1    MIRGPFPPRPPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAEKPQTTIYIG 60

Query: 317  RIAQSVGNDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGFCEFESAEGVLRALRLLTKLN 376
            RIAQSV NDFMLSLLQLCGPVKSWKRAQDP+DGTPRTFGFCEFESAEGVLRALRLLTKLN
Sbjct: 61   RIAQSVDNDFMLSLLQLCGPVKSWKRAQDPSDGTPRTFGFCEFESAEGVLRALRLLTKLN 120

Query: 377  IDGQELVLKGTQATRDYLKRYVEKKAENSKKQEETQLSETKVEESDTANVAKNETSKPPA 436
            IDGQEL LKGTQATRDYLKRYVEKKAENSKK +ETQ+SETK EE+DTANVAK ETSKP A
Sbjct: 121  IDGQELGLKGTQATRDYLKRYVEKKAENSKKLKETQISETKEEEADTANVAKKETSKPSA 180

Query: 437  EDSKEDQDSGEKEDHYIACSAVLSDEDRDADRAVSEKLTNALEERLKSRPLPPPPLLTAT 496
            EDSKED DSGEK D  IACSAVLSDEDRDADR   EK+TNALEERLKSRPLPPPPLLT T
Sbjct: 181  EDSKEDHDSGEK-DFDIACSAVLSDEDRDADREAKEKITNALEERLKSRPLPPPPLLTTT 240

Query: 497  DVSGNSSAEPSVKMKDGEADSDILRSDAAEDRNDDDTTSDNKLTSEHDKPETSSPDRSRR 556
            DVS NSS EPS K+KDGEAD D L+ DAA+DRND+DTTSD+K  SEHDKPETSSPDRSRR
Sbjct: 241  DVSDNSSVEPSAKLKDGEADGDTLKPDAADDRNDEDTTSDHKQASEHDKPETSSPDRSRR 300

Query: 557  YDRRSRERDRERDLKRDKEREIERYERETERERARKEREQRRKFEESERQYEECLKEWEY 616
            YDRRSRERDRERDLKRDKEREIERYERETERERARKEREQRRKFEE+ERQYEECLKEWEY
Sbjct: 301  YDRRSRERDRERDLKRDKEREIERYERETERERARKEREQRRKFEEAERQYEECLKEWEY 360

Query: 617  REREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREKED 676
            REREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREKED
Sbjct: 361  REREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREKED 420

Query: 677  DSVDRQKEEEEIAEAKRKAEEEQQLKQKDLLNTQSGQMTSVDEKTVLAEESANEVEVMDS 736
            DS DR+KEEEEIAEAKRKAEEEQ  K +D      GQ TS++EKTV+AEES NE++VM S
Sbjct: 421  DSFDREKEEEEIAEAKRKAEEEQLQKLRDPPKLLPGQTTSINEKTVIAEESTNEIKVMAS 480

Query: 737  ERDPELDCSCDNYTGDGILQNGSGDELNT----TRQSGGLPAKRLGFGLVGSGKRTAVPS 796
            ER+ ELD SCDN+ GDGI QNGSGDELNT    TRQSGGLP KRLGFGLVGSGKRTAVPS
Sbjct: 481  ERESELDSSCDNHIGDGISQNGSGDELNTIPSETRQSGGLPGKRLGFGLVGSGKRTAVPS 540

Query: 797  VFH-EEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISNVNSK 856
            VFH EEDDEA KEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISN NSK
Sbjct: 541  VFHEEEDDEAHKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISNANSK 600

Query: 857  EEKPDSERERGRRSNEKSSRDRDRNDEEAYRSKDENKTIDRDREREPVLDKVKIPDNKKL 916
            EEKPDSERERGRR +EKS   RDRNDE+ YRSKDENK  DRDRER+ VLDKVK PDNKKL
Sbjct: 601  EEKPDSERERGRRPSEKSGH-RDRNDEDTYRSKDENKATDRDRERDHVLDKVKTPDNKKL 660

Query: 917  LDAKQLIDMIPKTKEELFSYDINWTIYEKHALHERMRPWISKKITEFLGEEETTLVDYIV 976
            LDAKQLIDMIPKTKEELFSYDINW IYEKHALHERMRPWISKKITEFLGEEETTLVDYIV
Sbjct: 661  LDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRPWISKKITEFLGEEETTLVDYIV 720

Query: 977  SSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 1024
            SSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA
Sbjct: 721  SSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 770

[Close]
BLAST of CmoCh04G018100 vs. TrEMBL
Match: A0A0A0KQ81_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G601600 PE=4 SV=1)

HSP 1 Score: 1199.5 bits (3102), Expect = 0.0e+00
Identity = 739/987 (74.87%), Postives = 786/987 (79.64%), Query Frame = 1 

Query: 61   LVSTPQPPPSLSYVAAGVPPTAPSFRPV-PFSAHQFSPMPGTGMLNPNYSNIGVQP---- 120
            L S PQP            P  P+ +P+ P SA    P P +  L P   ++G+ P    
Sbjct: 11   LDSNPQP----------AEPENPNSQPIKPESAASSFPPPQS--LPPTSLSVGINPTLHP 70

Query: 121  PGVGSVAAP---APGMASGATGAVPVPVPV--PQPMMAYQ---VPPGQIPNPVMRPYATM 180
            P V ++  P   AP   SG T AVP   P   P P+ A+    +P   + NP        
Sbjct: 71   PLVSTLQPPLSYAPSPLSG-TMAVPPTAPSFRPVPLSAHHFSPMPGTGMMNPSYSNPGVQ 130

Query: 181  PNGFAAVPTATP------QGAFPIPVILDTAPGYLNCQKQIMLAPECSFALFLRLSMHSA 240
            P G ++V    P       GA P+PV             Q M+A +          M   
Sbjct: 131  PPGVSSVAAPAPGMVSGGTGAVPVPV------------PQPMMAYQVPPGQVPNQVMRPY 190

Query: 241  GDSFHCYAAIIYMLWIVIFFFTCAGVPRFPSPYHAMIRTPFPPRPPGAMGMVPAMPRPPV 300
                + +AA+          F   GVPRFPSPY  MIRTPFPPRPPGAMGMVP MPRPP+
Sbjct: 191  ATMPNGFAAVPTAT--PQGAFPLPGVPRFPSPYPGMIRTPFPPRPPGAMGMVPGMPRPPI 250

Query: 301  PGVPGVHPIIPPVVRPAVLPSVTPAEKPQTTIYIGRIAQSVGNDFMLSLLQLCGPVKSWK 360
            PG+PGV PIIPPVVRPA+LPS+TPAEKPQTTIYIGRIAQSV NDFMLSLLQLCGPVKSWK
Sbjct: 251  PGIPGVRPIIPPVVRPAILPSITPAEKPQTTIYIGRIAQSVDNDFMLSLLQLCGPVKSWK 310

Query: 361  RAQDPTDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKK 420
            RAQDP+DGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQEL LKGTQATRDYLKRYVEKK
Sbjct: 311  RAQDPSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELGLKGTQATRDYLKRYVEKK 370

Query: 421  AENSKKQEETQLSETKVEESDTANVAKNETSKPPAEDSKEDQDSGEKEDHYIACSAVLSD 480
            AENSKK +ETQ SETK EE+DT NVAK ETSKP AEDSKED DSGEK D  IACSAVLSD
Sbjct: 371  AENSKKLKETQASETKEEETDTTNVAKKETSKPSAEDSKEDHDSGEK-DFDIACSAVLSD 430

Query: 481  EDRDADRAVSEKLTNALEERLKSRPLPPPPLLTATDVSGNSSAEPSVKMKDGEADSDILR 540
            EDRDADR   EKLTNALEER+KSRPLPPPPLLT TDVS NSS EPS K KDGEAD D  +
Sbjct: 431  EDRDADREAKEKLTNALEERMKSRPLPPPPLLTTTDVSDNSSVEPSAKPKDGEADGDTSK 490

Query: 541  SDAAEDRNDDDTTSDNKLTSEHDKPETSSPDRSRRYDRRSRERDRERDLKRDKEREIERY 600
             DAA+DRND+DTTSD+K  SEHDKPETSSP+RSRRYDRRSRERDRERDLKRDKEREIERY
Sbjct: 491  PDAADDRNDEDTTSDHKQASEHDKPETSSPERSRRYDRRSRERDRERDLKRDKEREIERY 550

Query: 601  ERETERERARKEREQRRKFEESERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKK 660
            ERETERERARKEREQRRKFEE+ERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKK
Sbjct: 551  ERETERERARKEREQRRKFEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKK 610

Query: 661  EILYDEDDEDDDSRRKWRRGALEEKRKKRSREKEDDSVDRQKEEEEIAEAKRKAEEEQQL 720
            EILYDEDDEDDDSRRKWRRGALEEKRKKRSREKEDDS DRQ+EEEEIAEAKRKAEEEQ  
Sbjct: 611  EILYDEDDEDDDSRRKWRRGALEEKRKKRSREKEDDSFDRQREEEEIAEAKRKAEEEQLQ 670

Query: 721  KQKDLLNTQSGQMTSVDEKTVLAEESANEVEVMDSERDPELDCSCDNYTGDGILQNGSGD 780
            K +D       Q  SV EKTV AEES  E++V+ SER+ E+D SCDN+ GDGILQNGSGD
Sbjct: 671  KLRDPPKLLPSQTISVSEKTVTAEESTIEIKVVASERESEIDSSCDNHIGDGILQNGSGD 730

Query: 781  ELNT----TRQSGGLPAKRLGFGLVGSGKRTAVPSVFH-EEDDEAQKEKKMRPLVPIDYS 840
            ELNT    TRQSGGLP KRLGFGLVGSGKRTAVPSVFH EEDDEA KEKKMRPLVPIDYS
Sbjct: 731  ELNTIPSETRQSGGLPGKRLGFGLVGSGKRTAVPSVFHEEEDDEAHKEKKMRPLVPIDYS 790

Query: 841  AEELQAVQPASTGALPPNLAAAAEFAKRISNVNSKEEKPDSERERGRRSNEKSSRDRDRN 900
            AEELQAVQP STGALPPNLAAAAEFAKRISNVNSKEEKPDSERERGRR +EKS   RDRN
Sbjct: 791  AEELQAVQPPSTGALPPNLAAAAEFAKRISNVNSKEEKPDSERERGRRPSEKSGH-RDRN 850

Query: 901  DEEAYRSKDENKTIDRDREREPVLDKVKIPDNKKLLDAKQLIDMIPKTKEELFSYDINWT 960
            DE+ +RSKDENK  DRDRER+ VLDKVK PDNKKLLDAKQLIDMIPKTKEELFSYDINW 
Sbjct: 851  DEDTHRSKDENKATDRDRERDHVLDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWA 910

Query: 961  IYEKHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAE 1020
            IYEKHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAE
Sbjct: 911  IYEKHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAE 968

Query: 1021 MFVLKMWRMLIFEIKKVETGLAFRTKA 1024
            MFVLKMWRMLIFEIKKVETGLAFRTKA
Sbjct: 971  MFVLKMWRMLIFEIKKVETGLAFRTKA 968

[Close]
BLAST of CmoCh04G018100 vs. TrEMBL
Match: W9RKZ1_9ROSA (RNA-binding protein 25 OS=Morus notabilis GN=L484_027789 PE=4 SV=1)

HSP 1 Score: 979.5 bits (2531), Expect = 3.0e-282
Identity = 642/1072 (59.89%), Postives = 770/1072 (71.83%), Query Frame = 1 

Query: 1    MADSSSSSPATLDSNPQAAEPENPNSQANKAESAASSFPPPQSLPPTSLSVGMNPTMHSP 60
            MAD+ SS PAT++ NPQ ++ +N  SQ+N         PPP   PP   S    PT  SP
Sbjct: 1    MADAPSS-PATMEFNPQKSQDQNSTSQSNLPN------PPPAPTPPPPSSQASQPTQSSP 60

Query: 61   LVS-----TPQPPPSLSYV--------AAGVPPTAPSFRPVPFSAHQFSPMPGTGMLNPN 120
              S      P  PPS+SY         A+ VPP+APSFRPVP    QFSP+P     NP+
Sbjct: 61   NPSPNSTQVPPTPPSISYAPPPVSGVAASFVPPSAPSFRPVP----QFSPIPN--FQNPS 120

Query: 121  YSNIGVQPPGVGSVAAPAPGMASGATGAVPVPVPVP-QPMMAYQVPPGQIPNPVMRP-YA 180
                GVQPPGV S AA      SG    VP+ VPVP QP+M YQV PGQ PNP +RP YA
Sbjct: 121  LQIPGVQPPGVSSAAA------SGGAAGVPISVPVPPQPLMHYQVQPGQFPNPALRPSYA 180

Query: 181  TMPNGFAAVPTATPQGAFPIPVILDTAPGYLNCQKQIMLAPECSFALFLRLSMHSAGDSF 240
             +PNGF AVP A  QG  P P                         LF+ +  +SAGD  
Sbjct: 181  PIPNGFTAVPGAVTQGTIPPPG-----------------------GLFVSV-FYSAGDCC 240

Query: 241  HCYAAIIYMLWIVIFFFTCAGVPRFPSPYHAMIRTPFPPRPPGAMGMVPAMPRPPVPGVP 300
            + YAAI  ML +        G+PRFPSPY  M+R  F PRPPGA+G+   +PRPPVPG+P
Sbjct: 241  NAYAAISIMLLM-------CGLPRFPSPYTTMVRHAFSPRPPGAIGV---LPRPPVPGIP 300

Query: 301  GVHPIIPPVVRPAVLPSVTPAEKPQTTIYIGRIAQSVGNDFMLSLLQLCGPVKSWKRAQD 360
            GV PIIPP+VRP V+PSVTPAEKPQTT+Y+G+IA +V NDFMLS+LQ CGPVK+WKRAQD
Sbjct: 301  GVRPIIPPIVRP-VIPSVTPAEKPQTTVYVGKIAPTVENDFMLSVLQFCGPVKAWKRAQD 360

Query: 361  PTDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENS 420
            PTDGTPR FGFCEFESAEGVLRALRLL+K +IDGQELVL   QATRDYL+RYVEKK ENS
Sbjct: 361  PTDGTPRGFGFCEFESAEGVLRALRLLSKFSIDGQELVLNVNQATRDYLERYVEKKTENS 420

Query: 421  KKQEETQLSETKVEESDTANVAKNETSKPPAED-SKEDQDSGEKEDHYIACSAVLSDEDR 480
            KK + T+ S    E+   A+  K +  KP AE+ +KED DSG KE+   A   +++DED 
Sbjct: 421  KKLKATEASPAMKEDESAASDEKTDLPKPTAEEPTKEDSDSGNKENDN-ANFGIVTDEDS 480

Query: 481  DADRAVSEKLTNALEERLKSRPLPPPP------LLTATDVSGNSSAEPSVKMKDGEADSD 540
            +ADR    KLT+ +EERLK++PLPPPP         + + +GNS++E   K +DG++D+D
Sbjct: 481  EADREAMGKLTSMIEERLKTKPLPPPPPPPPPPAQASGEGAGNSNSELPAKSRDGDSDAD 540

Query: 541  ILRS-----------------DAAEDRNDDDTTSDNKLTSEHDKPETSSPDRSRRYDRRS 600
            +                    DA E++NDD++TS NKL SE+D+ E SSPD++RR+DRRS
Sbjct: 541  MRNGKVFIKEMDLVLIYFHDFDATEEKNDDESTSGNKLVSENDRTEASSPDKNRRHDRRS 600

Query: 601  RERDRERDLKRDKEREIERYERETERERARKEREQRRKFEESERQYEECLKEWEYRERER 660
            R+RDRERDLKR+KERE+ER+ERETERER RKEREQRR+ EE+ERQYEE LKEWEYRERE+
Sbjct: 601  RDRDRERDLKREKERELERFERETERERIRKEREQRRRLEEAERQYEEYLKEWEYREREK 660

Query: 661  EKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREKEDDSVDR 720
            EKQRQYEKEREK++ERKRKKEI+Y+E+D+DDDSR++WRR ALEEKRKKR REKEDD VD 
Sbjct: 661  EKQRQYEKEREKDRERKRKKEIIYEEEDDDDDSRKRWRRSALEEKRKKRLREKEDDLVDM 720

Query: 721  QKEEEEIAEAKRKAEEEQQLKQ-KDLLNTQSGQMTSVDEKTVLAEESANEVEVMDSERDP 780
            QKEEEEIAEAKR+AEEE+Q +Q KDLL + S ++T+  EK VLAEES+ E++    ++D 
Sbjct: 721  QKEEEEIAEAKRRAEEEKQRQQEKDLLESSSDRVTNGTEKAVLAEESSAEMK----DKDY 780

Query: 781  ELDCSCDNYTGDGILQNGSGDELNT--------TRQSGGLPAKRLGFGLVGSGKRTAVPS 840
            E D   DN  GD ILQNG   + +T        T+ SG +  K+LGFGLVGSGKRTAVPS
Sbjct: 781  EGDSGHDNRIGDMILQNGGIIDESTMASVAASDTQHSGNVTTKKLGFGLVGSGKRTAVPS 840

Query: 841  VF-HEEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISNVNSK 900
            VF +E+DD+A KEKKMRPLVPIDYS EELQAVQ AS GA  PNL AAAEFAKRISN  SK
Sbjct: 841  VFSNEDDDDAHKEKKMRPLVPIDYSTEELQAVQTAS-GATQPNLVAAAEFAKRISNTGSK 900

Query: 901  EEKPDSERERGRRSNEKSSRDRDRNDEEAYRSKDENKTIDRD-REREPVLDKVKIPDNKK 960
            +EK D+E+ER RR+       +DR DE+  R+++E K   RD  +RE   D+VK  +NKK
Sbjct: 901  DEKLDAEKERSRRT-------KDRYDEDGNRTRNETKEKTRDTTDREYGGDRVKTTNNKK 960

Query: 961  LLDAKQLIDMIPKTKEELFSYDINWTIYEKHALHERMRPWISKKITEFLGEEETTLVDYI 1020
            LLDAKQLIDMIPKTKEELFSY+INW +Y+KHALHERMRPWISKKITEFLGEEE TLVDYI
Sbjct: 961  LLDAKQLIDMIPKTKEELFSYEINWAVYDKHALHERMRPWISKKITEFLGEEEATLVDYI 1005

Query: 1021 VSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTK 1023
            VSSTQEHV+A  ML+LLQSILDEEAEMFVLKMWRMLIFEIKKVETGL+ R++
Sbjct: 1021 VSSTQEHVEADGMLQLLQSILDEEAEMFVLKMWRMLIFEIKKVETGLSSRSR 1005

[Close]
BLAST of CmoCh04G018100 vs. TrEMBL
Match: B9HVB3_POPTR (Splicing factor PWI domain-containing family protein OS=Populus trichocarpa GN=POPTR_0010s10480g PE=4 SV=1)

HSP 1 Score: 912.9 bits (2358), Expect = 3.5e-262
Identity = 543/790 (68.73%), Postives = 637/790 (80.63%), Query Frame = 1 

Query: 246  GVPRFPSPYHAMIRTPFPPRPPGAMGMVPAMPRPPVPGVPGVHPIIPPVVRPAVLPSVTP 305
            G+ R+PSPY AM+R  FPPRPPGA+ +VPA+PRP VPG+PGV P++ P++RP V+PSVTP
Sbjct: 116  GIMRYPSPYPAMVRPLFPPRPPGALSVVPAVPRPLVPGIPGVRPVMYPIIRP-VIPSVTP 175

Query: 306  AEKPQTTIYIGRIAQSVGNDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGFCEFESAEGV 365
            AEKPQTT+YIG+IA SV NDFM+SLLQ CGPVKSWKR QDP +GTPR FGFCEFESAEGV
Sbjct: 176  AEKPQTTVYIGKIAPSVENDFMMSLLQFCGPVKSWKRPQDPANGTPRGFGFCEFESAEGV 235

Query: 366  LRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKQEETQLSETKVEESDTAN 425
            LRALRLLTK NIDGQEL+L   QAT++YL+RYVEKK ENSK  +ETQ+++T  E+    +
Sbjct: 236  LRALRLLTKFNIDGQELMLNVNQATKEYLERYVEKKTENSKNFKETQVADTGKEDGTGID 295

Query: 426  VAKNETSKPPAEDSKEDQDSGEKEDHYIACSAVLSDEDRDADRAVSEKLTNALEERLKSR 485
              K E SK  AEDS  D D G KE+H +A   +++DED+  DR   EKLT+ +EERLK++
Sbjct: 296  GKKGEFSKSSAEDSNNDSDKGNKENHDLANFGIVTDEDKAGDREAIEKLTSMIEERLKTK 355

Query: 486  PL--PPPPLLTATDVSGNSSAEPSVKMKDGEADSDILRSDAAEDRNDDDTTSDNKLTSEH 545
            PL  PPPP L   D SGNS+ E   K +DG+ D+DI+RS   E +NDD+T+SDNK  SE 
Sbjct: 356  PLPPPPPPSLAPADGSGNSNLELPSKSRDGDTDADIMRS--VEGKNDDETSSDNKAASEQ 415

Query: 546  DKPETSSPDRSRRYDRRSRERDRERDLKRDKEREIERYERETERERARKEREQRRKFEES 605
            D+PETSSPDRSR YDRRSR+RDRERDLKR+KEREIERYERETERER RKEREQRRK EE+
Sbjct: 416  DRPETSSPDRSRGYDRRSRDRDRERDLKREKEREIERYERETERERVRKEREQRRKIEEA 475

Query: 606  ERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGAL 665
            ER+YEE L++WEYRERE+EKQRQYEKER+KE+ERKR+KEIL+DE+DEDDDSR++WRR AL
Sbjct: 476  EREYEERLRDWEYREREKEKQRQYEKERDKERERKRRKEILHDEEDEDDDSRKRWRRSAL 535

Query: 666  EEKRKKRSREKEDDSVDRQKEEEEIAEAKRKAEEEQ-QLKQKDLLNTQSGQMTSVDEKTV 725
            E++R+KR REKEDD  DR KEEEEIAE+KR+ EEE+ Q KQKD L   SG + +  E T 
Sbjct: 536  EDRRRKRLREKEDDLADRLKEEEEIAESKRRDEEEKLQEKQKDELKLLSGHVLNESEMTN 595

Query: 726  LAEESANEVEVMDSERDPELDCSCDNYTGDGILQNGSGDELN-------TTRQSGGLPAK 785
            LAE    E +    E+D + D   +N  GD +LQNG+GDE N        TR +G  PA+
Sbjct: 596  LAEGPIVESKDEAIEKDYDGDSGNENLAGDEVLQNGNGDESNMALMAEPDTRHNGSAPAR 655

Query: 786  RLGFGLVGSGKRTAVPSVFH-EEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGALPPN 845
            +LGFGLVGSGKR AVPSVFH EEDD+A+KEKKMRPLVPIDYS EELQAVQPA +GA PPN
Sbjct: 656  KLGFGLVGSGKRAAVPSVFHEEEDDDARKEKKMRPLVPIDYSTEELQAVQPAVSGAQPPN 715

Query: 846  LAAAAEFAKRISNVNSKEEKPDSERERGRRSNEKSS-RDRDRNDEEAYRSKDENKTIDRD 905
            L AAAEFAKRISNV  KEEKPD ERER RRS+++SS RDRD+   E  R        DRD
Sbjct: 716  LVAAAEFAKRISNVAPKEEKPDVERERSRRSHDRSSQRDRDQKVPERDR--------DRD 775

Query: 906  REREPVLDKVKIPDNKKLLDAKQLIDMIPKTKEELFSYDINWTIYEKHALHERMRPWISK 965
            R R+  LDKVK PD +KLLDAKQLIDMIPKTKEELF Y+INW +Y+KH LHERMRPWISK
Sbjct: 776  RNRDHGLDKVKTPDKQKLLDAKQLIDMIPKTKEELFLYEINWAVYDKHELHERMRPWISK 835

Query: 966  KITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKV 1024
            KITEFLGEEETTLVDYIVSSTQEHVKASQMLE+LQ+ILD+EAEMFVLKMWRMLIFEIKKV
Sbjct: 836  KITEFLGEEETTLVDYIVSSTQEHVKASQMLEMLQAILDDEAEMFVLKMWRMLIFEIKKV 894

[Close]
BLAST of CmoCh04G018100 vs. TrEMBL
Match: A0A0B0MSI7_GOSAR (RNA-binding 25 OS=Gossypium arboreum GN=F383_26567 PE=4 SV=1)

HSP 1 Score: 909.4 bits (2349), Expect = 3.8e-261
Identity = 615/1039 (59.19%), Postives = 735/1039 (70.74%), Query Frame = 1 

Query: 5    SSSSPATLDSNPQAAEPE--NPNSQANKAESAASSFPPPQSLP---PTSLSVGMNPTMHS 64
            S SSPA LD+    ++P+  NPN    + + + SS    Q  P   P++  V   P    
Sbjct: 4    SPSSPAALDTTNSQSKPDSDNPNPLPTQPDPSPSSTVSTQLQPNPNPSAPPVSPQPPPAV 63

Query: 65   PLVSTPQPPPSLSYVAAGVPPTAPSFRPVPFSAHQFSPMPGTGMLNPNYSNIGVQPPGVG 124
            P  STP PP  +S  A  VPP  PSFRPVP    QFSP+P       N+   G+QPPGV 
Sbjct: 64   PSYSTPPPP--ISGAATAVPPAPPSFRPVP----QFSPLP-------NFQPPGLQPPGVS 123

Query: 125  SVAAPAPGMASGATGAVPVPVPVPQPMMAYQVPPGQIPNPVMRPYATMPNGFAAVPTATP 184
            S    APG              +P P+M YQVP GQ+PNP +RP+          P    
Sbjct: 124  S----APGS-------------IPPPLMQYQVPAGQVPNPALRPF---------APIPNG 183

Query: 185  QGAFPIPVILDTAPGYLNCQKQIMLAPECSFALFLRLSMHSAGDSFHCYAAIIYMLWIVI 244
              A P  V   T P    C                 L  H      + + AI+ M     
Sbjct: 184  YAALPGAVPPGTMPPPGKCT----------------LRSHD-----YEFDAILLMF---- 243

Query: 245  FFFTCAGVPRFPSPYHAMIRTPFPPRPPGAMGMVPAMPRPPVPGVPGVHPIIPPVVRPAV 304
                 +G+ R+PSPY AMIR PFPPRPPGA+G++P + RPPVPG     PIIPPV+RPAV
Sbjct: 244  ----PSGLLRYPSPYPAMIRPPFPPRPPGAIGVMPTVSRPPVPGA---RPIIPPVIRPAV 303

Query: 305  LPSVTPAEKPQTTIYIGRIAQSVGNDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGFCEF 364
             P+VTP EKPQTT+YIG+IA +V NDFMLSLL LCGPVKSWKR   P++GTP+ FG C+F
Sbjct: 304  -PNVTPTEKPQTTVYIGKIAPTVDNDFMLSLLHLCGPVKSWKR---PSNGTPKAFGLCDF 363

Query: 365  ESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKQEETQLSETKVE 424
            ESAEGVLRA+RLL+K NIDGQELV+  +QAT++YL++YVEKK EN+KK  E   +E++ E
Sbjct: 364  ESAEGVLRAVRLLSKFNIDGQELVVNVSQATKEYLEKYVEKKTENAKKLNEPPSAESEKE 423

Query: 425  ESDTANVAKNETSKPPAEDSKEDQDSGEKEDHY-IACSAVLSDEDRDADRAVSEKLTNAL 484
              +     KNE+S    ED K++ DS  KE+   IA S +++DEDR+ADR  SEKL   +
Sbjct: 424  GENAVGDVKNESSTTSVEDPKKNSDSANKENIMDIANSGIVTDEDREADRDASEKLAGMI 483

Query: 485  EERLKSRPLPPPPLLTATDVSGNSSAEPSVKMKDGEADSDILRSDAAEDRNDDDTTSDNK 544
            EERLK+ PLPPPP  TA D SG S+++  VK +DG +D D++R+D AE +NDD+TTS++K
Sbjct: 484  EERLKTNPLPPPPPQTAPDGSGKSNSDLPVKSRDGNSDIDLMRNDGAEGKNDDETTSESK 543

Query: 545  LTSEHDKPETSSPDRSRRYDRRSRERDRERDLKRDKEREIERYERETERERARKEREQRR 604
             T E+D+PETSSPDR  RYDR    RDRE+DLKRDKEREIER ERETERER RKEREQRR
Sbjct: 544  ATIENDRPETSSPDR--RYDR---SRDREQDLKRDKEREIERLERETERERMRKEREQRR 603

Query: 605  KFEESERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDD-DSRRK 664
            K EE+ER+YE+ L++WE RE+++EKQRQYEKEREKE+ERKRKKEI YDE+D+DD DSR++
Sbjct: 604  KIEEAEREYEKFLRDWEQREKDKEKQRQYEKEREKERERKRKKEIRYDEEDDDDEDSRKR 663

Query: 665  WRRGALEEKRKKRSREKEDDSVDRQKEEEEIAEAKRKAEEEQ-QLKQ-KDLLNTQSGQMT 724
             RR  LEEKR+KR REKEDD  DR KEE+EIAEAK++AEEEQ QL+Q +D L   SG+  
Sbjct: 664  LRRSVLEEKRRKRLREKEDDLADRLKEEKEIAEAKKRAEEEQLQLQQQRDALKLLSGRFA 723

Query: 725  SVDEKTVLAEESANEVEVMDSERDPELDCSCDNY-TGDGILQNGSGDELNT-------TR 784
            +   K VLAEE + E +    E+  E + S +N  +GDG +QNGS DE N        TR
Sbjct: 724  NGAAKNVLAEEPSTESKDKAVEQHYEHESSHENQISGDGNMQNGSVDESNVAFVSASDTR 783

Query: 785  QSGGLPAKRLGFGLVGSGKRTAVPSVFHEE-DDEAQKEKKMRPLVPIDYSAEELQAVQPA 844
            QSG  P K LGFGLVGSGKRT VPSVFHEE DD+AQKEKKMRPLVPIDYS EELQAVQP 
Sbjct: 784  QSGNAPRK-LGFGLVGSGKRTTVPSVFHEEEDDDAQKEKKMRPLVPIDYSTEELQAVQP- 843

Query: 845  STGALPPNLAAAAEFAKRISNVNSKEEKPDSERERGRRSNEKSSRDRDRNDEEAYRSKDE 904
              GA  PNL AAAEFAKRISNVN KEEK D+ERER RRS +KSSRD+DRNDE++ RS+DE
Sbjct: 844  --GAPAPNLVAAAEFAKRISNVNPKEEKSDAERERSRRSYDKSSRDKDRNDEDS-RSRDE 903

Query: 905  NKTI--DRDREREPVLDKVKIPDNKKLLDAKQLIDMIPKTKEELFSYDINWTIYEKHALH 964
            +K    DRDR+RE   DKVK  DN+KLLDAKQLIDMIPKTKEELFSY+INW +Y++HALH
Sbjct: 904  SKEKIPDRDRDREHGQDKVKTTDNQKLLDAKQLIDMIPKTKEELFSYEINWNVYDQHALH 957

Query: 965  ERMRPWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWR 1024
            ERMRPWISKKITEFLGEEE TLVDYIVS TQEHVKASQMLELLQSILDEEAEMFVLKMWR
Sbjct: 964  ERMRPWISKKITEFLGEEEKTLVDYIVSGTQEHVKASQMLELLQSILDEEAEMFVLKMWR 957

[Close]
BLAST of CmoCh04G018100 vs. TAIR10
Match: AT1G60200.1 (AT1G60200.1 splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein)

HSP 1 Score: 677.2 bits (1746), Expect = 1.6e-194
Identity = 451/798 (56.52%), Postives = 571/798 (71.55%), Query Frame = 1 

Query: 246  GVPRFPSPYHAMIRTPFPPRPPGAMGMVPAMPRPPVPGVPGVHPIIPPVVRPAVLPSVTP 305
            G+ R+PSPY  M+R  F  RPPG +G V   PRP +PG+PG+ P++PP+VRPA LP VTP
Sbjct: 139  GLLRYPSPYPTMVRPGFIMRPPGTIGAVQLAPRPLIPGMPGLRPVMPPMVRPASLPFVTP 198

Query: 306  AEKPQTTIYIGRIAQSVGNDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGFCEFESAEGV 365
            AEKPQTTIYIG+IA +V NDFM+S+L+ CG VKS  RA+DPT   P+ FGF EFESAEG+
Sbjct: 199  AEKPQTTIYIGKIA-TVENDFMMSILEFCGHVKSCLRAEDPTTKKPKGFGFYEFESAEGI 258

Query: 366  LRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKQEETQ-----LSETKVEE 425
            LRA+RLLT+  IDGQEL++   QAT++YL +YVEKK E +KK +E+Q      +E    E
Sbjct: 259  LRAIRLLTQRTIDGQELLVNVNQATKEYLLKYVEKKIETAKKAKESQGTKENQAEGPESE 318

Query: 426  SDTANVAKNETSKPPAEDSKEDQDSGEKEDHYIACSAVLSDEDRDADRAVSEKLTNALEE 485
             D    A NET K        D +S  KE+  IA SAVL+DE+R+ADR   EK+  A+EE
Sbjct: 319  QDKLESADNETGK--------DGESKIKENIDIANSAVLTDEEREADREAMEKIETAIEE 378

Query: 486  RLKSRPLPPPPLLTATDVSGNSSAEPSVKMKDGEADSDILRSDAAEDRNDDDTTSDNKLT 545
            RLKS PLPPPP       +  S  E + K KDG++++D+ RSDAA         +D + +
Sbjct: 379  RLKSNPLPPPP----PPPADGSGMEFAFKSKDGDSNTDVARSDAA--------ANDVETS 438

Query: 546  SEHDKPETSSPDRSRRYDRRSRERDRERDLKRDKEREIERYERETERERARKEREQRRKF 605
             EH++P+TSSPD S+R DRRSRER        +KE+E++RYERE ERER+RKEREQRRK 
Sbjct: 439  GEHNRPDTSSPDWSKRNDRRSRERG-------EKEQEMDRYEREAERERSRKEREQRRKL 498

Query: 606  EESERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDE--DDDSRRKW 665
            E++ER Y+  L++WE RERE+EK+RQYEKE+EKEKERKRKKEI Y+E++E  DDDSRR+W
Sbjct: 499  EDAERAYQTRLRQWERREREKEKERQYEKEKEKEKERKRKKEIRYEEEEEEDDDDSRRRW 558

Query: 666  RRGALEEKRKKRSREKEDDSVDRQKEEEEIAEAKRKAEEEQ-QLKQKDLLNTQSGQMTSV 725
             R AL+E+R+++ REKEDD  DR KEEEE+AEAKR AEE+  Q +Q D L   SGQ  ++
Sbjct: 559  HRAALDERRRRQLREKEDDLADRLKEEEEVAEAKRSAEEQNLQQQQLDALRILSGQ-AAI 618

Query: 726  DEKTVLAEESANEVEVMDSERDPELDCSCDNYTGDGILQNGSGDEL----NTTRQSGGLP 785
              +TV      N+ +         +  S + +      +NGSG+E     N +      P
Sbjct: 619  GSETVQTSPIENDHKATLQ----TVGESANEHHAADFEENGSGNESMAIDNNSGSEAHAP 678

Query: 786  AKRLGFGLVGSGKRTAVPSVFHEED-DEAQKEKKMRPLVPIDYSAEELQAVQPASTGALP 845
            +K+LGFGLVGSGKRT+VPSVF+EED DEA+K KKM+PLVPIDYS EE +AV    +G  P
Sbjct: 679  SKKLGFGLVGSGKRTSVPSVFYEEDEDEARKAKKMKPLVPIDYSTEEQEAVAHGGSGNTP 738

Query: 846  PNLAAAAEFAKRISNVNSKEEKPDSERERGRRSNEKSS-RDRDRNDEEAYRSKDENKTID 905
            P+LA AAEFAKRIS+ N KEE  ++E++R RRS++K+S RDR+R  E   R +D ++  D
Sbjct: 739  PHLALAAEFAKRISSTNPKEETIETEKQRSRRSHDKASHRDRERERE---RDRDRDRVRD 798

Query: 906  R-DREREPVLD-----KVKIPDNKKLLDAKQLIDMIPKTKEELFSYDINWTIYEKHALHE 965
            R D    P  D     K KI D  K LDAKQLID IPKTKE+LFSY+INW +Y+KH +HE
Sbjct: 799  RGDGHSGPTKDAKESGKAKIIDT-KFLDAKQLIDTIPKTKEDLFSYEINWAMYDKHQVHE 858

Query: 966  RMRPWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRM 1024
            RMRPWISKKI EFLGEEE TLVD+IVS+TQ+HV+ASQMLELLQSILDEEAEMFVLKMWRM
Sbjct: 859  RMRPWISKKIMEFLGEEEATLVDFIVSNTQQHVQASQMLELLQSILDEEAEMFVLKMWRM 899

[Close]
BLAST of CmoCh04G018100 vs. NCBI nr
Match: gi|659090812|ref|XP_008446215.1| (PREDICTED: RNA-binding protein 25 isoform X2 [Cucumis melo])

HSP 1 Score: 1262.3 bits (3265), Expect = 0.0e+00
Identity = 722/852 (84.74%), Postives = 752/852 (88.26%), Query Frame = 1 

Query: 212  LFLRLSMHSAGDSFHCYAAIIYMLWIVI-------------------------------- 271
            +F+RLSMHSA DSFH Y AI+YMLWI++                                
Sbjct: 31   VFIRLSMHSAADSFHSYPAIVYMLWILVMAFMNPHRLFFYIFQAPLWLDVSSLPTLSDAF 90

Query: 272  ---FFFTCAGVPRFPSPYHAMIRTPFPPRPPGAMGMVPAMPRPPVPGVPGVHPIIPPVVR 331
               F F CAGVPRFPSPY AMIR PFPPRPPGAMGMVPAMPRPP+PG+PGV PIIPPVVR
Sbjct: 91   ARCFSFVCAGVPRFPSPYPAMIRGPFPPRPPGAMGMVPAMPRPPIPGIPGVRPIIPPVVR 150

Query: 332  PAVLPSVTPAEKPQTTIYIGRIAQSVGNDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGF 391
            PAVLPSVTPAEKPQTTIYIGRIAQSV NDFMLSLLQLCGPVKSWKRAQDP+DGTPRTFGF
Sbjct: 151  PAVLPSVTPAEKPQTTIYIGRIAQSVDNDFMLSLLQLCGPVKSWKRAQDPSDGTPRTFGF 210

Query: 392  CEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKKAENSKKQEETQLSET 451
            CEFESAEGVLRALRLLTKLNIDGQEL LKGTQATRDYLKRYVEKKAENSKK +ETQ+SET
Sbjct: 211  CEFESAEGVLRALRLLTKLNIDGQELGLKGTQATRDYLKRYVEKKAENSKKLKETQISET 270

Query: 452  KVEESDTANVAKNETSKPPAEDSKEDQDSGEKEDHYIACSAVLSDEDRDADRAVSEKLTN 511
            K EE+DTANVAK ETSKP AEDSKED DSGEK D  IACSAVLSDEDRDADR   EK+TN
Sbjct: 271  KEEEADTANVAKKETSKPSAEDSKEDHDSGEK-DFDIACSAVLSDEDRDADREAKEKITN 330

Query: 512  ALEERLKSRPLPPPPLLTATDVSGNSSAEPSVKMKDGEADSDILRSDAAEDRNDDDTTSD 571
            ALEERLKSRPLPPPPLLT TDVS NSS EPS K+KDGEAD D L+ DAA+DRND+DTTSD
Sbjct: 331  ALEERLKSRPLPPPPLLTTTDVSDNSSVEPSAKLKDGEADGDTLKPDAADDRNDEDTTSD 390

Query: 572  NKLTSEHDKPETSSPDRSRRYDRRSRERDRERDLKRDKEREIERYERETERERARKEREQ 631
            +K  SEHDKPETSSPDRSRRYDRRSRERDRERDLKRDKEREIERYERETERERARKEREQ
Sbjct: 391  HKQASEHDKPETSSPDRSRRYDRRSRERDRERDLKRDKEREIERYERETERERARKEREQ 450

Query: 632  RRKFEESERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRR 691
            RRKFEE+ERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRR
Sbjct: 451  RRKFEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRR 510

Query: 692  KWRRGALEEKRKKRSREKEDDSVDRQKEEEEIAEAKRKAEEEQQLKQKDLLNTQSGQMTS 751
            KWRRGALEEKRKKRSREKEDDS DR+KEEEEIAEAKRKAEEEQ  K +D      GQ TS
Sbjct: 511  KWRRGALEEKRKKRSREKEDDSFDREKEEEEIAEAKRKAEEEQLQKLRDPPKLLPGQTTS 570

Query: 752  VDEKTVLAEESANEVEVMDSERDPELDCSCDNYTGDGILQNGSGDELNT----TRQSGGL 811
            ++EKTV+AEES NE++VM SER+ ELD SCDN+ GDGI QNGSGDELNT    TRQSGGL
Sbjct: 571  INEKTVIAEESTNEIKVMASERESELDSSCDNHIGDGISQNGSGDELNTIPSETRQSGGL 630

Query: 812  PAKRLGFGLVGSGKRTAVPSVFH-EEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGAL 871
            P KRLGFGLVGSGKRTAVPSVFH EEDDEA KEKKMRPLVPIDYSAEELQAVQPASTGAL
Sbjct: 631  PGKRLGFGLVGSGKRTAVPSVFHEEEDDEAHKEKKMRPLVPIDYSAEELQAVQPASTGAL 690

Query: 872  PPNLAAAAEFAKRISNVNSKEEKPDSERERGRRSNEKSSRDRDRNDEEAYRSKDENKTID 931
            PPNLAAAAEFAKRISN NSKEEKPDSERERGRR +EKS   RDRNDE+ YRSKDENK  D
Sbjct: 691  PPNLAAAAEFAKRISNANSKEEKPDSERERGRRPSEKSGH-RDRNDEDTYRSKDENKATD 750

Query: 932  RDREREPVLDKVKIPDNKKLLDAKQLIDMIPKTKEELFSYDINWTIYEKHALHERMRPWI 991
            RDRER+ VLDKVK PDNKKLLDAKQLIDMIPKTKEELFSYDINW IYEKHALHERMRPWI
Sbjct: 751  RDRERDHVLDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRPWI 810

Query: 992  SKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIK 1024
            SKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIK
Sbjct: 811  SKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIK 870

[Close]
BLAST of CmoCh04G018100 vs. NCBI nr
Match: gi|659090810|ref|XP_008446214.1| (PREDICTED: RNA-binding protein 25 isoform X1 [Cucumis melo])

HSP 1 Score: 1221.5 bits (3159), Expect = 0.0e+00
Identity = 750/988 (75.91%), Postives = 795/988 (80.47%), Query Frame = 1 

Query: 61   LVSTPQPPPSLSYVAAGVPPTAPSFRPV-PFSAHQFSPMPGTGMLNPNYSNIGVQP---- 120
            L S PQP            P  P+ +P+ P SA    P P +  L P   ++G+ P    
Sbjct: 11   LDSNPQP----------AEPENPNSQPIKPESAASSFPPPQS--LPPTSLSVGINPTLHP 70

Query: 121  PGVGSVAAP---APGMASGATGAVPVPVPV--PQPMMAYQVPP----GQIPNPVMRPYAT 180
            P V ++  P   AP   SG T AVP   P   P P+ A+   P    G + NP       
Sbjct: 71   PLVSTLQPPLSYAPSPLSG-TAAVPPTAPSFRPVPLSAHHFSPMPGTGML-NPSYSNPGV 130

Query: 181  MPNGFAAVPTATP------QGAFPIPVILDTAPGYLNCQKQIMLAPECSFALFLRLSMHS 240
             P G ++V    P       GA P+PV             Q M+A +          M  
Sbjct: 131  QPPGVSSVAAPAPGMVSGGTGAVPVPV------------PQPMMAYQVPPGQVPNPVMRP 190

Query: 241  AGDSFHCYAAIIYMLWIVIFFFTCAGVPRFPSPYHAMIRTPFPPRPPGAMGMVPAMPRPP 300
                 + +AA+          F   GVPRFPSPY AMIR PFPPRPPGAMGMVPAMPRPP
Sbjct: 191  YATMPNGFAAVPTAT--PQGAFPLPGVPRFPSPYPAMIRGPFPPRPPGAMGMVPAMPRPP 250

Query: 301  VPGVPGVHPIIPPVVRPAVLPSVTPAEKPQTTIYIGRIAQSVGNDFMLSLLQLCGPVKSW 360
            +PG+PGV PIIPPVVRPAVLPSVTPAEKPQTTIYIGRIAQSV NDFMLSLLQLCGPVKSW
Sbjct: 251  IPGIPGVRPIIPPVVRPAVLPSVTPAEKPQTTIYIGRIAQSVDNDFMLSLLQLCGPVKSW 310

Query: 361  KRAQDPTDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEK 420
            KRAQDP+DGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQEL LKGTQATRDYLKRYVEK
Sbjct: 311  KRAQDPSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELGLKGTQATRDYLKRYVEK 370

Query: 421  KAENSKKQEETQLSETKVEESDTANVAKNETSKPPAEDSKEDQDSGEKEDHYIACSAVLS 480
            KAENSKK +ETQ+SETK EE+DTANVAK ETSKP AEDSKED DSGEK D  IACSAVLS
Sbjct: 371  KAENSKKLKETQISETKEEEADTANVAKKETSKPSAEDSKEDHDSGEK-DFDIACSAVLS 430

Query: 481  DEDRDADRAVSEKLTNALEERLKSRPLPPPPLLTATDVSGNSSAEPSVKMKDGEADSDIL 540
            DEDRDADR   EK+TNALEERLKSRPLPPPPLLT TDVS NSS EPS K+KDGEAD D L
Sbjct: 431  DEDRDADREAKEKITNALEERLKSRPLPPPPLLTTTDVSDNSSVEPSAKLKDGEADGDTL 490

Query: 541  RSDAAEDRNDDDTTSDNKLTSEHDKPETSSPDRSRRYDRRSRERDRERDLKRDKEREIER 600
            + DAA+DRND+DTTSD+K  SEHDKPETSSPDRSRRYDRRSRERDRERDLKRDKEREIER
Sbjct: 491  KPDAADDRNDEDTTSDHKQASEHDKPETSSPDRSRRYDRRSRERDRERDLKRDKEREIER 550

Query: 601  YERETERERARKEREQRRKFEESERQYEECLKEWEYREREREKQRQYEKEREKEKERKRK 660
            YERETERERARKEREQRRKFEE+ERQYEECLKEWEYREREREKQRQYEKEREKEKERKRK
Sbjct: 551  YERETERERARKEREQRRKFEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRK 610

Query: 661  KEILYDEDDEDDDSRRKWRRGALEEKRKKRSREKEDDSVDRQKEEEEIAEAKRKAEEEQQ 720
            KEILYDEDDEDDDSRRKWRRGALEEKRKKRSREKEDDS DR+KEEEEIAEAKRKAEEEQ 
Sbjct: 611  KEILYDEDDEDDDSRRKWRRGALEEKRKKRSREKEDDSFDREKEEEEIAEAKRKAEEEQL 670

Query: 721  LKQKDLLNTQSGQMTSVDEKTVLAEESANEVEVMDSERDPELDCSCDNYTGDGILQNGSG 780
             K +D      GQ TS++EKTV+AEES NE++VM SER+ ELD SCDN+ GDGI QNGSG
Sbjct: 671  QKLRDPPKLLPGQTTSINEKTVIAEESTNEIKVMASERESELDSSCDNHIGDGISQNGSG 730

Query: 781  DELNT----TRQSGGLPAKRLGFGLVGSGKRTAVPSVFH-EEDDEAQKEKKMRPLVPIDY 840
            DELNT    TRQSGGLP KRLGFGLVGSGKRTAVPSVFH EEDDEA KEKKMRPLVPIDY
Sbjct: 731  DELNTIPSETRQSGGLPGKRLGFGLVGSGKRTAVPSVFHEEEDDEAHKEKKMRPLVPIDY 790

Query: 841  SAEELQAVQPASTGALPPNLAAAAEFAKRISNVNSKEEKPDSERERGRRSNEKSSRDRDR 900
            SAEELQAVQPASTGALPPNLAAAAEFAKRISN NSKEEKPDSERERGRR +EKS   RDR
Sbjct: 791  SAEELQAVQPASTGALPPNLAAAAEFAKRISNANSKEEKPDSERERGRRPSEKSGH-RDR 850

Query: 901  NDEEAYRSKDENKTIDRDREREPVLDKVKIPDNKKLLDAKQLIDMIPKTKEELFSYDINW 960
            NDE+ YRSKDENK  DRDRER+ VLDKVK PDNKKLLDAKQLIDMIPKTKEELFSYDINW
Sbjct: 851  NDEDTYRSKDENKATDRDRERDHVLDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINW 910

Query: 961  TIYEKHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEA 1020
             IYEKHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEA
Sbjct: 911  AIYEKHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEA 968

Query: 1021 EMFVLKMWRMLIFEIKKVETGLAFRTKA 1024
            EMFVLKMWRMLIFEIKKVETGLAFRTKA
Sbjct: 971  EMFVLKMWRMLIFEIKKVETGLAFRTKA 968

[Close]
BLAST of CmoCh04G018100 vs. NCBI nr
Match: gi|659090814|ref|XP_008446216.1| (PREDICTED: RNA-binding protein 25 isoform X3 [Cucumis melo])

HSP 1 Score: 1207.2 bits (3122), Expect = 0.0e+00
Identity = 688/772 (89.12%), Postives = 713/772 (92.36%), Query Frame = 1 

Query: 257  MIRTPFPPRPPGAMGMVPAMPRPPVPGVPGVHPIIPPVVRPAVLPSVTPAEKPQTTIYIG 316
            MIR PFPPRPPGAMGMVPAMPRPP+PG+PGV PIIPPVVRPAVLPSVTPAEKPQTTIYIG
Sbjct: 1    MIRGPFPPRPPGAMGMVPAMPRPPIPGIPGVRPIIPPVVRPAVLPSVTPAEKPQTTIYIG 60

Query: 317  RIAQSVGNDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGFCEFESAEGVLRALRLLTKLN 376
            RIAQSV NDFMLSLLQLCGPVKSWKRAQDP+DGTPRTFGFCEFESAEGVLRALRLLTKLN
Sbjct: 61   RIAQSVDNDFMLSLLQLCGPVKSWKRAQDPSDGTPRTFGFCEFESAEGVLRALRLLTKLN 120

Query: 377  IDGQELVLKGTQATRDYLKRYVEKKAENSKKQEETQLSETKVEESDTANVAKNETSKPPA 436
            IDGQEL LKGTQATRDYLKRYVEKKAENSKK +ETQ+SETK EE+DTANVAK ETSKP A
Sbjct: 121  IDGQELGLKGTQATRDYLKRYVEKKAENSKKLKETQISETKEEEADTANVAKKETSKPSA 180

Query: 437  EDSKEDQDSGEKEDHYIACSAVLSDEDRDADRAVSEKLTNALEERLKSRPLPPPPLLTAT 496
            EDSKED DSGEK D  IACSAVLSDEDRDADR   EK+TNALEERLKSRPLPPPPLLT T
Sbjct: 181  EDSKEDHDSGEK-DFDIACSAVLSDEDRDADREAKEKITNALEERLKSRPLPPPPLLTTT 240

Query: 497  DVSGNSSAEPSVKMKDGEADSDILRSDAAEDRNDDDTTSDNKLTSEHDKPETSSPDRSRR 556
            DVS NSS EPS K+KDGEAD D L+ DAA+DRND+DTTSD+K  SEHDKPETSSPDRSRR
Sbjct: 241  DVSDNSSVEPSAKLKDGEADGDTLKPDAADDRNDEDTTSDHKQASEHDKPETSSPDRSRR 300

Query: 557  YDRRSRERDRERDLKRDKEREIERYERETERERARKEREQRRKFEESERQYEECLKEWEY 616
            YDRRSRERDRERDLKRDKEREIERYERETERERARKEREQRRKFEE+ERQYEECLKEWEY
Sbjct: 301  YDRRSRERDRERDLKRDKEREIERYERETERERARKEREQRRKFEEAERQYEECLKEWEY 360

Query: 617  REREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREKED 676
            REREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREKED
Sbjct: 361  REREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREKED 420

Query: 677  DSVDRQKEEEEIAEAKRKAEEEQQLKQKDLLNTQSGQMTSVDEKTVLAEESANEVEVMDS 736
            DS DR+KEEEEIAEAKRKAEEEQ  K +D      GQ TS++EKTV+AEES NE++VM S
Sbjct: 421  DSFDREKEEEEIAEAKRKAEEEQLQKLRDPPKLLPGQTTSINEKTVIAEESTNEIKVMAS 480

Query: 737  ERDPELDCSCDNYTGDGILQNGSGDELNT----TRQSGGLPAKRLGFGLVGSGKRTAVPS 796
            ER+ ELD SCDN+ GDGI QNGSGDELNT    TRQSGGLP KRLGFGLVGSGKRTAVPS
Sbjct: 481  ERESELDSSCDNHIGDGISQNGSGDELNTIPSETRQSGGLPGKRLGFGLVGSGKRTAVPS 540

Query: 797  VFH-EEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISNVNSK 856
            VFH EEDDEA KEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISN NSK
Sbjct: 541  VFHEEEDDEAHKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISNANSK 600

Query: 857  EEKPDSERERGRRSNEKSSRDRDRNDEEAYRSKDENKTIDRDREREPVLDKVKIPDNKKL 916
            EEKPDSERERGRR +EKS   RDRNDE+ YRSKDENK  DRDRER+ VLDKVK PDNKKL
Sbjct: 601  EEKPDSERERGRRPSEKSGH-RDRNDEDTYRSKDENKATDRDRERDHVLDKVKTPDNKKL 660

Query: 917  LDAKQLIDMIPKTKEELFSYDINWTIYEKHALHERMRPWISKKITEFLGEEETTLVDYIV 976
            LDAKQLIDMIPKTKEELFSYDINW IYEKHALHERMRPWISKKITEFLGEEETTLVDYIV
Sbjct: 661  LDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRPWISKKITEFLGEEETTLVDYIV 720

Query: 977  SSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 1024
            SSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA
Sbjct: 721  SSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 770

[Close]
BLAST of CmoCh04G018100 vs. NCBI nr
Match: gi|778705068|ref|XP_011655629.1| (PREDICTED: RNA-binding protein 25 isoform X1 [Cucumis sativus])

HSP 1 Score: 1199.5 bits (3102), Expect = 0.0e+00
Identity = 739/987 (74.87%), Postives = 786/987 (79.64%), Query Frame = 1 

Query: 61   LVSTPQPPPSLSYVAAGVPPTAPSFRPV-PFSAHQFSPMPGTGMLNPNYSNIGVQP---- 120
            L S PQP            P  P+ +P+ P SA    P P +  L P   ++G+ P    
Sbjct: 11   LDSNPQP----------AEPENPNSQPIKPESAASSFPPPQS--LPPTSLSVGINPTLHP 70

Query: 121  PGVGSVAAP---APGMASGATGAVPVPVPV--PQPMMAYQ---VPPGQIPNPVMRPYATM 180
            P V ++  P   AP   SG T AVP   P   P P+ A+    +P   + NP        
Sbjct: 71   PLVSTLQPPLSYAPSPLSG-TMAVPPTAPSFRPVPLSAHHFSPMPGTGMMNPSYSNPGVQ 130

Query: 181  PNGFAAVPTATP------QGAFPIPVILDTAPGYLNCQKQIMLAPECSFALFLRLSMHSA 240
            P G ++V    P       GA P+PV             Q M+A +          M   
Sbjct: 131  PPGVSSVAAPAPGMVSGGTGAVPVPV------------PQPMMAYQVPPGQVPNQVMRPY 190

Query: 241  GDSFHCYAAIIYMLWIVIFFFTCAGVPRFPSPYHAMIRTPFPPRPPGAMGMVPAMPRPPV 300
                + +AA+          F   GVPRFPSPY  MIRTPFPPRPPGAMGMVP MPRPP+
Sbjct: 191  ATMPNGFAAVPTAT--PQGAFPLPGVPRFPSPYPGMIRTPFPPRPPGAMGMVPGMPRPPI 250

Query: 301  PGVPGVHPIIPPVVRPAVLPSVTPAEKPQTTIYIGRIAQSVGNDFMLSLLQLCGPVKSWK 360
            PG+PGV PIIPPVVRPA+LPS+TPAEKPQTTIYIGRIAQSV NDFMLSLLQLCGPVKSWK
Sbjct: 251  PGIPGVRPIIPPVVRPAILPSITPAEKPQTTIYIGRIAQSVDNDFMLSLLQLCGPVKSWK 310

Query: 361  RAQDPTDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELVLKGTQATRDYLKRYVEKK 420
            RAQDP+DGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQEL LKGTQATRDYLKRYVEKK
Sbjct: 311  RAQDPSDGTPRTFGFCEFESAEGVLRALRLLTKLNIDGQELGLKGTQATRDYLKRYVEKK 370

Query: 421  AENSKKQEETQLSETKVEESDTANVAKNETSKPPAEDSKEDQDSGEKEDHYIACSAVLSD 480
            AENSKK +ETQ SETK EE+DT NVAK ETSKP AEDSKED DSGEK D  IACSAVLSD
Sbjct: 371  AENSKKLKETQASETKEEETDTTNVAKKETSKPSAEDSKEDHDSGEK-DFDIACSAVLSD 430

Query: 481  EDRDADRAVSEKLTNALEERLKSRPLPPPPLLTATDVSGNSSAEPSVKMKDGEADSDILR 540
            EDRDADR   EKLTNALEER+KSRPLPPPPLLT TDVS NSS EPS K KDGEAD D  +
Sbjct: 431  EDRDADREAKEKLTNALEERMKSRPLPPPPLLTTTDVSDNSSVEPSAKPKDGEADGDTSK 490

Query: 541  SDAAEDRNDDDTTSDNKLTSEHDKPETSSPDRSRRYDRRSRERDRERDLKRDKEREIERY 600
             DAA+DRND+DTTSD+K  SEHDKPETSSP+RSRRYDRRSRERDRERDLKRDKEREIERY
Sbjct: 491  PDAADDRNDEDTTSDHKQASEHDKPETSSPERSRRYDRRSRERDRERDLKRDKEREIERY 550

Query: 601  ERETERERARKEREQRRKFEESERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKK 660
            ERETERERARKEREQRRKFEE+ERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKK
Sbjct: 551  ERETERERARKEREQRRKFEEAERQYEECLKEWEYREREREKQRQYEKEREKEKERKRKK 610

Query: 661  EILYDEDDEDDDSRRKWRRGALEEKRKKRSREKEDDSVDRQKEEEEIAEAKRKAEEEQQL 720
            EILYDEDDEDDDSRRKWRRGALEEKRKKRSREKEDDS DRQ+EEEEIAEAKRKAEEEQ  
Sbjct: 611  EILYDEDDEDDDSRRKWRRGALEEKRKKRSREKEDDSFDRQREEEEIAEAKRKAEEEQLQ 670

Query: 721  KQKDLLNTQSGQMTSVDEKTVLAEESANEVEVMDSERDPELDCSCDNYTGDGILQNGSGD 780
            K +D       Q  SV EKTV AEES  E++V+ SER+ E+D SCDN+ GDGILQNGSGD
Sbjct: 671  KLRDPPKLLPSQTISVSEKTVTAEESTIEIKVVASERESEIDSSCDNHIGDGILQNGSGD 730

Query: 781  ELNT----TRQSGGLPAKRLGFGLVGSGKRTAVPSVFH-EEDDEAQKEKKMRPLVPIDYS 840
            ELNT    TRQSGGLP KRLGFGLVGSGKRTAVPSVFH EEDDEA KEKKMRPLVPIDYS
Sbjct: 731  ELNTIPSETRQSGGLPGKRLGFGLVGSGKRTAVPSVFHEEEDDEAHKEKKMRPLVPIDYS 790

Query: 841  AEELQAVQPASTGALPPNLAAAAEFAKRISNVNSKEEKPDSERERGRRSNEKSSRDRDRN 900
            AEELQAVQP STGALPPNLAAAAEFAKRISNVNSKEEKPDSERERGRR +EKS   RDRN
Sbjct: 791  AEELQAVQPPSTGALPPNLAAAAEFAKRISNVNSKEEKPDSERERGRRPSEKSGH-RDRN 850

Query: 901  DEEAYRSKDENKTIDRDREREPVLDKVKIPDNKKLLDAKQLIDMIPKTKEELFSYDINWT 960
            DE+ +RSKDENK  DRDRER+ VLDKVK PDNKKLLDAKQLIDMIPKTKEELFSYDINW 
Sbjct: 851  DEDTHRSKDENKATDRDRERDHVLDKVKTPDNKKLLDAKQLIDMIPKTKEELFSYDINWA 910

Query: 961  IYEKHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAE 1020
            IYEKHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAE
Sbjct: 911  IYEKHALHERMRPWISKKITEFLGEEETTLVDYIVSSTQEHVKASQMLELLQSILDEEAE 968

Query: 1021 MFVLKMWRMLIFEIKKVETGLAFRTKA 1024
            MFVLKMWRMLIFEIKKVETGLAFRTKA
Sbjct: 971  MFVLKMWRMLIFEIKKVETGLAFRTKA 968

[Close]
BLAST of CmoCh04G018100 vs. NCBI nr
Match: gi|449434915|ref|XP_004135241.1| (PREDICTED: RNA-binding protein 25 isoform X2 [Cucumis sativus])

HSP 1 Score: 1187.9 bits (3072), Expect = 0.0e+00
Identity = 679/772 (87.95%), Postives = 705/772 (91.32%), Query Frame = 1 

Query: 257  MIRTPFPPRPPGAMGMVPAMPRPPVPGVPGVHPIIPPVVRPAVLPSVTPAEKPQTTIYIG 316
            MIRTPFPPRPPGAMGMVP MPRPP+PG+PGV PIIPPVVRPA+LPS+TPAEKPQTTIYIG
Sbjct: 1    MIRTPFPPRPPGAMGMVPGMPRPPIPGIPGVRPIIPPVVRPAILPSITPAEKPQTTIYIG 60

Query: 317  RIAQSVGNDFMLSLLQLCGPVKSWKRAQDPTDGTPRTFGFCEFESAEGVLRALRLLTKLN 376
            RIAQSV NDFMLSLLQLCGPVKSWKRAQDP+DGTPRTFGFCEFESAEGVLRALRLLTKLN
Sbjct: 61   RIAQSVDNDFMLSLLQLCGPVKSWKRAQDPSDGTPRTFGFCEFESAEGVLRALRLLTKLN 120

Query: 377  IDGQELVLKGTQATRDYLKRYVEKKAENSKKQEETQLSETKVEESDTANVAKNETSKPPA 436
            IDGQEL LKGTQATRDYLKRYVEKKAENSKK +ETQ SETK EE+DT NVAK ETSKP A
Sbjct: 121  IDGQELGLKGTQATRDYLKRYVEKKAENSKKLKETQASETKEEETDTTNVAKKETSKPSA 180

Query: 437  EDSKEDQDSGEKEDHYIACSAVLSDEDRDADRAVSEKLTNALEERLKSRPLPPPPLLTAT 496
            EDSKED DSGEK D  IACSAVLSDEDRDADR   EKLTNALEER+KSRPLPPPPLLT T
Sbjct: 181  EDSKEDHDSGEK-DFDIACSAVLSDEDRDADREAKEKLTNALEERMKSRPLPPPPLLTTT 240

Query: 497  DVSGNSSAEPSVKMKDGEADSDILRSDAAEDRNDDDTTSDNKLTSEHDKPETSSPDRSRR 556
            DVS NSS EPS K KDGEAD D  + DAA+DRND+DTTSD+K  SEHDKPETSSP+RSRR
Sbjct: 241  DVSDNSSVEPSAKPKDGEADGDTSKPDAADDRNDEDTTSDHKQASEHDKPETSSPERSRR 300

Query: 557  YDRRSRERDRERDLKRDKEREIERYERETERERARKEREQRRKFEESERQYEECLKEWEY 616
            YDRRSRERDRERDLKRDKEREIERYERETERERARKEREQRRKFEE+ERQYEECLKEWEY
Sbjct: 301  YDRRSRERDRERDLKRDKEREIERYERETERERARKEREQRRKFEEAERQYEECLKEWEY 360

Query: 617  REREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREKED 676
            REREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREKED
Sbjct: 361  REREREKQRQYEKEREKEKERKRKKEILYDEDDEDDDSRRKWRRGALEEKRKKRSREKED 420

Query: 677  DSVDRQKEEEEIAEAKRKAEEEQQLKQKDLLNTQSGQMTSVDEKTVLAEESANEVEVMDS 736
            DS DRQ+EEEEIAEAKRKAEEEQ  K +D       Q  SV EKTV AEES  E++V+ S
Sbjct: 421  DSFDRQREEEEIAEAKRKAEEEQLQKLRDPPKLLPSQTISVSEKTVTAEESTIEIKVVAS 480

Query: 737  ERDPELDCSCDNYTGDGILQNGSGDELNT----TRQSGGLPAKRLGFGLVGSGKRTAVPS 796
            ER+ E+D SCDN+ GDGILQNGSGDELNT    TRQSGGLP KRLGFGLVGSGKRTAVPS
Sbjct: 481  ERESEIDSSCDNHIGDGILQNGSGDELNTIPSETRQSGGLPGKRLGFGLVGSGKRTAVPS 540

Query: 797  VFH-EEDDEAQKEKKMRPLVPIDYSAEELQAVQPASTGALPPNLAAAAEFAKRISNVNSK 856
            VFH EEDDEA KEKKMRPLVPIDYSAEELQAVQP STGALPPNLAAAAEFAKRISNVNSK
Sbjct: 541  VFHEEEDDEAHKEKKMRPLVPIDYSAEELQAVQPPSTGALPPNLAAAAEFAKRISNVNSK 600

Query: 857  EEKPDSERERGRRSNEKSSRDRDRNDEEAYRSKDENKTIDRDREREPVLDKVKIPDNKKL 916
            EEKPDSERERGRR +EKS   RDRNDE+ +RSKDENK  DRDRER+ VLDKVK PDNKKL
Sbjct: 601  EEKPDSERERGRRPSEKSGH-RDRNDEDTHRSKDENKATDRDRERDHVLDKVKTPDNKKL 660

Query: 917  LDAKQLIDMIPKTKEELFSYDINWTIYEKHALHERMRPWISKKITEFLGEEETTLVDYIV 976
            LDAKQLIDMIPKTKEELFSYDINW IYEKHALHERMRPWISKKITEFLGEEETTLVDYIV
Sbjct: 661  LDAKQLIDMIPKTKEELFSYDINWAIYEKHALHERMRPWISKKITEFLGEEETTLVDYIV 720

Query: 977  SSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 1024
            SSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA
Sbjct: 721  SSTQEHVKASQMLELLQSILDEEAEMFVLKMWRMLIFEIKKVETGLAFRTKA 770

The following BLAST results are available for this feature:
BLAST of CmoCh04G018100 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RBM25_MOUSE3.3e-2426.10RNA-binding protein 25 OS=Mus musculus GN=Rbm25 PE=1 SV=2[more]
RBM25_HUMAN7.4e-2426.64RNA-binding protein 25 OS=Homo sapiens GN=RBM25 PE=1 SV=3[more]
BLAST of CmoCh04G018100 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GBJ9_CUCME0.0e+0089.12RNA binding motif protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0KQ81_CUCSA0.0e+0074.87Uncharacterized protein OS=Cucumis sativus GN=Csa_5G601600 PE=4 SV=1[more]
W9RKZ1_9ROSA3.0e-28259.89RNA-binding protein 25 OS=Morus notabilis GN=L484_027789 PE=4 SV=1[more]
B9HVB3_POPTR3.5e-26268.73Splicing factor PWI domain-containing family protein OS=Populus trichocarpa GN=P... [more]
A0A0B0MSI7_GOSAR3.8e-26159.19RNA-binding 25 OS=Gossypium arboreum GN=F383_26567 PE=4 SV=1[more]
BLAST of CmoCh04G018100 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G60200.11.6e-19456.52 splicing factor PWI domain-containing protein / RNA recognition moti... [more]
BLAST of CmoCh04G018100 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090812|ref|XP_008446215.1|0.0e+0084.74PREDICTED: RNA-binding protein 25 isoform X2 [Cucumis melo][more]
gi|659090810|ref|XP_008446214.1|0.0e+0075.91PREDICTED: RNA-binding protein 25 isoform X1 [Cucumis melo][more]
gi|659090814|ref|XP_008446216.1|0.0e+0089.12PREDICTED: RNA-binding protein 25 isoform X3 [Cucumis melo][more]
gi|778705068|ref|XP_011655629.1|0.0e+0074.87PREDICTED: RNA-binding protein 25 isoform X1 [Cucumis sativus][more]
gi|449434915|ref|XP_004135241.1|0.0e+0087.95PREDICTED: RNA-binding protein 25 isoform X2 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR002483PWI_dom
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0006397mRNA processing
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006397 mRNA processing
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G018100.1CmoCh04G018100.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 313..382
score: 1.
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 312..385
score: 7.4
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 311..396
score: 10
IPR002483PWI domainGENE3DG3DSA:1.20.1390.10coord: 920..1013
score: 5.8
IPR002483PWI domainPFAMPF01480PWIcoord: 946..1009
score: 7.8
IPR002483PWI domainSMARTSM00311pwi_2coord: 939..1012
score: 2.2
IPR002483PWI domainPROFILEPS51025PWIcoord: 926..1023
score: 36
IPR002483PWI domainunknownSSF101233PWI domaincoord: 943..1011
score: 2.3
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 300..385
score: 1.3
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 268..384
score: 1.09
NoneNo IPR availableunknownCoilCoilcoord: 399..419
score: -coord: 564..613
score: -coord: 617..644
score: -coord: 674..708
scor
NoneNo IPR availablePANTHERPTHR18806RBM25 PROTEINcoord: 140..182
score: 1.6E-228coord: 242..1023
score: 1.6E
NoneNo IPR availablePANTHERPTHR18806:SF4RNA-BINDING PROTEIN 25coord: 242..1023
score: 1.6E-228coord: 140..182
score: 1.6E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G018100Cucsa.286010Cucumber (Gy14) v1cgycmoB0794
CmoCh04G018100CmaCh18G008020Cucurbita maxima (Rimu)cmacmoB422
CmoCh04G018100CmaCh04G017270Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G018100Cla010092Watermelon (97103) v1cmowmB694
CmoCh04G018100Csa5G601600Cucumber (Chinese Long) v2cmocuB739
CmoCh04G018100MELO3C012001Melon (DHL92) v3.5.1cmomeB632
CmoCh04G018100ClCG05G025280Watermelon (Charleston Gray)cmowcgB655
CmoCh04G018100CSPI05G22730Wild cucumber (PI 183967)cmocpiB748
CmoCh04G018100Lsi04G005420Bottle gourd (USVL1VR-Ls)cmolsiB661
CmoCh04G018100Cp4.1LG09g05040Cucurbita pepo (Zucchini)cmocpeB646
CmoCh04G018100Cp4.1LG01g15320Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G018100MELO3C012001.2Melon (DHL92) v3.6.1cmomedB721
CmoCh04G018100CsaV3_5G031610Cucumber (Chinese Long) v3cmocucB0875
CmoCh04G018100Cla97C05G107440Watermelon (97103) v2cmowmbB730
CmoCh04G018100Bhi07G001377Wax gourdcmowgoB0890
CmoCh04G018100CsGy5G022250Cucumber (Gy14) v2cgybcmoB653
CmoCh04G018100Carg14464Silver-seed gourdcarcmoB0985
CmoCh04G018100Carg14346Silver-seed gourdcarcmoB0343
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh04G018100CmoCh18G008070Cucurbita moschata (Rifu)cmocmoB341
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G018100Cucurbita pepo (Zucchini)cmocpeB656
CmoCh04G018100Silver-seed gourdcarcmoB0685
CmoCh04G018100Cucurbita moschata (Rifu)cmocmoB472
CmoCh04G018100Cucurbita maxima (Rimu)cmacmoB189
CmoCh04G018100Cucurbita maxima (Rimu)cmacmoB785