CmoCh04G017710 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G017710
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Carboxy-terminal region remorin
Location	Cmo_Chr04 : 8937928 .. 8939107 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTATGGTTTGTGCAGGACTGGTTGGGAAGGCAATTCTCGCGGCAAATGAGTCGAGGGAATGAATTCCCCGACGACGGAATAGAGGGTGTAACCGCCGTAGCAGCCGCCGCCTTTGCCATTCTTTCTGTTGAAGAATCGGGACCCATAAAGAATGTCGATCATCCTGAAACGTCGTCGTTCCAGAAGACAAAGAACGTCAAGGAGGACAATCGTACACCCCCTCCACGTCCGGCGCCGGAACCTGATAAGATTCCCCAGCCGTTCTCAGGTTTCTTAAATTTTCAATATAATTTTAACCCACATGGTTTACAATTCTGACATAAAAATATGGTTTTTAGCAAAATTTCGATTTGAATGTAATGATTGAGAAATATGGTGACAGTAAACTCCGAACAGGAAAAACAGAGACCAATAGAATACACAACCAACCCTTCTCCGGCCGCCATCAACAACATCTCCGGCGGCGGAAGAACAGAACCAGAGAGAGCAGTAGCAGTCCCTGGAAAGCCACAAACCCTGCCTTCTGAAACGAAAGCAGATCTGTGGGAAAAGGCAGAGCTGGGTAAAATCCAAGAAAGGTACTCTGTTCTTCTCCATTGCCTATCATATCTTAACGAACAATACCCATTACTAAAACTGGAGAAAATTTCAGATACCAGAAGGTGGACGAAAGAATTTGTTACTGGGAAAGCAAGAAGAAGGACAAAGCCATGCGCAAATTTGAAGCATCGCAGGTTCATGAACAGTTTGTCTGTGTTTAATGTTTGTTAGAACAATTGAGACAGAGGCGATATTGATGAACAGTGATTGACTCTGTTTTAAACATTTGAAGGCTGAGGGAATGAAGAAGAGTAAGAGGATAAAGGGAAGAAGAAAGCTGGAGGAAGACATGGAGTTCATAAAGAAAATAGGAGGAGAAGCAAGAACCAAAGCAGAGCAGAAGAAGAAGAAGGAGATTCTGAAGGCTAAGCAGAGAGCAGATATTATCAGACAGACAGGGAAGCTTCCCCTTGCTTGCTGCTGCTGATGAACATTGATAGCTCCGTTGATCTTCTCTTATTTTGTACGCTTAACTACTGAATGAATGCTTTGAGAACAAAAATAATCCATAATTCAAGTTTCTGTCAGATGGGTTCTCTGTTTTAATCTGTTTTTAGGAAAATTGTTGAAGCTGAT

mRNA sequence

ATGTTTATGGACTGGTTGGGAAGGCAATTCTCGCGGCAAATGAGTCGAGGGAATGAATTCCCCGACGACGGAATAGAGGGTGTAACCGCCGTAGCAGCCGCCGCCTTTGCCATTCTTTCTGTTGAAGAATCGGGACCCATAAAGAATGTCGATCATCCTGAAACGTCGTCGTTCCAGAAGACAAAGAACGTCAAGGAGGACAATCGTACACCCCCTCCACGTCCGGCGCCGGAACCTGATAAGATTCCCCAGCCGTTCTCAGTAAACTCCGAACAGGAAAAACAGAGACCAATAGAATACACAACCAACCCTTCTCCGGCCGCCATCAACAACATCTCCGGCGGCGGAAGAACAGAACCAGAGAGAGCAGTAGCAGTCCCTGGAAAGCCACAAACCCTGCCTTCTGAAACGAAAGCAGATCTGTGGGAAAAGGCAGAGCTGGGTAAAATCCAAGAAAGGTACTCTGTTCTTCTCCATTGCCTATCATATCTTAACGAACAATACCCATTACTAAAACTGGAGAAAATTTCAGATACCAGAAGGTGGACGAAAGAATTTGTTACTGGGAAAGCAAGAAGAAGGACAAAGCCATGCGCAAATTTGAAGCATCGCAGGTTCATGAACAGTTTGTCTGTGTTTAATGCTGAGGGAATGAAGAAGAGTAAGAGGATAAAGGGAAGAAGAAAGCTGGAGGAAGACATGGAGTTCATAAAGAAAATAGGAGGAGAAGCAAGAACCAAAGCAGAGCAGAAGAAGAAGAAGGAGATTCTGAAGGCTAAGCAGAGAGCAGATATTATCAGACAGACAGGGAAGCTTCCCCTTGCTTGCTGCTGCTGATGAACATTGATAGCTCCGTTGATCTTCTCTTATTTTGTACGCTTAACTACTGAATGAATGCTTTGAGAACAAAAATAATCCATAATTCAAGTTTCTGTCAGATGGGTTCTCTGTTTTAATCTGTTTTTAGGAAAATTGTTGAAGCTGAT

Coding sequence (CDS)

ATGTTTATGGACTGGTTGGGAAGGCAATTCTCGCGGCAAATGAGTCGAGGGAATGAATTCCCCGACGACGGAATAGAGGGTGTAACCGCCGTAGCAGCCGCCGCCTTTGCCATTCTTTCTGTTGAAGAATCGGGACCCATAAAGAATGTCGATCATCCTGAAACGTCGTCGTTCCAGAAGACAAAGAACGTCAAGGAGGACAATCGTACACCCCCTCCACGTCCGGCGCCGGAACCTGATAAGATTCCCCAGCCGTTCTCAGTAAACTCCGAACAGGAAAAACAGAGACCAATAGAATACACAACCAACCCTTCTCCGGCCGCCATCAACAACATCTCCGGCGGCGGAAGAACAGAACCAGAGAGAGCAGTAGCAGTCCCTGGAAAGCCACAAACCCTGCCTTCTGAAACGAAAGCAGATCTGTGGGAAAAGGCAGAGCTGGGTAAAATCCAAGAAAGGTACTCTGTTCTTCTCCATTGCCTATCATATCTTAACGAACAATACCCATTACTAAAACTGGAGAAAATTTCAGATACCAGAAGGTGGACGAAAGAATTTGTTACTGGGAAAGCAAGAAGAAGGACAAAGCCATGCGCAAATTTGAAGCATCGCAGGTTCATGAACAGTTTGTCTGTGTTTAATGCTGAGGGAATGAAGAAGAGTAAGAGGATAAAGGGAAGAAGAAAGCTGGAGGAAGACATGGAGTTCATAAAGAAAATAGGAGGAGAAGCAAGAACCAAAGCAGAGCAGAAGAAGAAGAAGGAGATTCTGAAGGCTAAGCAGAGAGCAGATATTATCAGACAGACAGGGAAGCTTCCCCTTGCTTGCTGCTGCTGA

Homology

[Close]

BLAST of CmoCh04G017710 vs. TrEMBL
Match: A0A0A0KSV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606540 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 5.5e-53
Identity = 142/309 (45.95%), Postives = 184/309 (59.55%), Query Frame = 1


Query: 2   FMDWLGRQFSRQMSRGNEFPDDGIEGVTAVAAAAFAILSVEESG---PIKNVDHPETSSF 61
           F +WLGRQFSRQMSRGNEF D G+E  TAVAAAAFAI  VEES    P+K +D P++SSF
Sbjct: 44  FGNWLGRQFSRQMSRGNEFSDVGMERATAVAAAAFAIHLVEESEFSKPVKKIDRPKSSSF 103

Query: 62  QKTKNVKEDNRTPPPRPAPEPDKIPQPFS---------------VNSEQEKQRPIEYTTN 121
            + K V+EDNR+PPPRPAPEPD+I +P S                 +EQ+KQ+PI   T 
Sbjct: 104 PRVKIVEEDNRSPPPRPAPEPDRILRPLSNVAKDPEAATGEKPAAKTEQQKQKPIGKITV 163

Query: 122 PSPAAINNISGG-GRTEPERAVAVPGKP-------------QTLPSETKADLWEKAELGK 181
           PSP  + + S   GRTE E+ + +P  P             QT P ETKAD+WEKAEL  
Sbjct: 164 PSPPVVYDYSRDRGRTETEKPLPIPRPPTPPISRKQPTAPIQTRPEETKADMWEKAEL-- 223

Query: 182 IQERYSVLLHCLSYLNEQYPLLKLEKISDTRRWTKEFVTGKARRRTKPCANLKHRRFMNS 241
                       + + E+Y     +K+++T  + +          TK     K  + +  
Sbjct: 224 ------------AKIQERY-----QKVNETISYWE----------TK-----KREKAICK 283

Query: 242 LSVFNAEGMKKSKRIKGRRKLEEDMEFIKKIGGEARTKAEQKKKKEILKAKQRADIIRQT 279
                 EG K+S+R KGR+K EEDMEFIK+I GEAR+KA+ KKK EILKA ++ADIIRQT
Sbjct: 284 FEASQVEGTKRSQREKGRKKFEEDMEFIKQIAGEARSKADHKKKNEILKANRKADIIRQT 318

[Close]

BLAST of CmoCh04G017710 vs. TrEMBL
Match: A0A151TFH6_CAJCA (Uncharacterized protein At3g61260 family OS=Cajanus cajan GN=KK1_012037 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 8.8e-11
Identity = 85/281 (30.25%), Postives = 132/281 (46.98%), Query Frame = 1


Query: 4   DWLGRQFSRQMSRGNEFPDDGIEGVTAVAAAAFAI----LSVEESGPIKNVDHPETSSFQ 63
           +W  +QF+R   R  +     ++   AVAAAAFAI    +S ++S  +K       +S  
Sbjct: 31  NWFQKQFAR---RSGDHDSRDMDHAAAVAAAAFAINLQDVSEQKSETLK-------ASLT 90

Query: 64  KTKNVKEDNRTPPPRPAPEPDKIPQPFSVNSEQEKQRPIEYTTNPSPAAINNISGGGRTE 123
           KTK+  +  +   P  +    ++   F    ++++++P E  T PSP+ +   S     +
Sbjct: 91  KTKSKVDGTKPQIPLLSSASKRLSGSFRSKDDKDEKKPEEAIT-PSPS-MKKTSTFTNEK 150

Query: 124 PERAVAVPGK-PQTLPSETKADLWEKAELGKIQERYSVLLHCL-SYLNEQYPLLKLEKIS 183
           PE  +  P + P      TKA+ WEKAEL  I++RY  L   + S+ N+       +K+ 
Sbjct: 151 PETTMPDPVRQPIVTERHTKANEWEKAELEDIRQRYDDLREVIDSWQNK-------KKMK 210

Query: 184 DTRRWTKEFVTGKARRRTKPCANLKHRRFMNSLSVFNAEGMKKSKRIKGRRKLEEDMEFI 243
             R+  KE   G A+RR K   +     F N ++                         I
Sbjct: 211 ARRKLNKE-ERGLAQRRMKASED-----FQNKITA------------------------I 262

Query: 244 KKIGGEARTKAEQKKKKEILKAKQRADIIRQTGKLPLACCC 279
            KI   ARTKAE+ +K E LKAK++A++IR TGKLP  C C
Sbjct: 271 DKIAEGARTKAEESRKNEELKAKEKANVIRTTGKLPGICFC 262

[Close]

BLAST of CmoCh04G017710 vs. TrEMBL
Match: V4VHG2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033969mg PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.4e-10
Identity = 72/234 (30.77%), Postives = 108/234 (46.15%), Query Frame = 1


Query: 50  VDHPETSSFQKTKNVKED--NRTPPPRPAPEPDKIP----QPFSVNSEQEKQRPIEYTTN 109
           V  P  SS +K     ++  NRT   +P  +  KI      P    S+ +   PI+  T 
Sbjct: 190 VTDPSPSSMKKAPTFADEVSNRTSSKKPEGDRQKIDLPPRSPGGTKSKPDIPPPIKPATP 249

Query: 110 PSPAAINNISGGGRTEPERAVAVPGKPQTLPSETKADLWEKAELGKIQERYSVLLHCLSY 169
           P             TE +R +  P +P T  +ET+AD WEKAE+ +I+ERY         
Sbjct: 250 P-------------TETKRQI--PARPPT--TETQADAWEKAEMARIKERY--------- 309

Query: 170 LNEQYPLLKLEKISDTRRWTKEFVTGKARRRTKPCANLKHRRFMNSLSVFNAEGMKKSKR 229
                     EK+++T    +E    KARR+                 +  AEG  + +R
Sbjct: 310 ----------EKLNETILSWEERKKKKARRK-----------------LDRAEGELEKRR 369

Query: 230 IKGRRKLEEDMEFIKKIGGEARTKAEQKKKKEILKAKQRADIIRQTGKLPLACC 278
           +K  +K   DME I +I G AR +A++K++K   KAK++A+ IR TGK+P   C
Sbjct: 370 VKALQKFRSDMESIDRIAGGARAQAQEKRRKAEFKAKEKANKIRTTGKIPATTC 370

[Close]

BLAST of CmoCh04G017710 vs. TrEMBL
Match: G7JHG5_MEDTR (Carboxy-terminal region remorin OS=Medicago truncatula GN=MTR_4g082910 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.8e-09
Identity = 55/161 (34.16%), Postives = 81/161 (50.31%), Query Frame = 1


Query: 120 PERAVAVPGKPQTLPSET--KADLWEKAELGKIQERYSVLLHCLSYLNEQYPLLKLEKIS 179
           P R  +   +P T PSET  KAD WE+ EL KI+ERY  LL  +    ++  +       
Sbjct: 230 PIRQTSTAARPSTRPSETEAKADAWEREELKKIKERYEKLLETIDSWEKRKKM------- 289

Query: 180 DTRRWTKEFVTGKARRRTKPCANLKHRRFMNSLSVFNAEGMKKSKRIKGRRKLEEDMEFI 239
                       KARR+       KH +  N+            KR K  +K ++ +++I
Sbjct: 290 ------------KARRKLN-----KHEQSENT-----------RKREKAWKKYQDKIKYI 349

Query: 240 KKIGGEARTKAEQKKKKEILKAKQRADIIRQTGKLPLACCC 279
            +I   AR ++++++K E LKAK +A+IIR TGKLP AC C
Sbjct: 350 DEIAEGARAQSDERRKNETLKAKDKANIIRTTGKLPGACSC 355

[Close]

BLAST of CmoCh04G017710 vs. TrEMBL
Match: M5XIQ5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017471mg PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 8.3e-09
Identity = 86/298 (28.86%), Postives = 133/298 (44.63%), Query Frame = 1


Query: 4   DWLGRQFSRQMSRGNEFPDDGIEGVTAVAAAAFAILSVEESG--PIKNVDHPETSSFQKT 63
           +W  RQ S +MS+  +  +  IE  TAVAAAA+AI S+E+S     K   +   +S  + 
Sbjct: 6   NWFQRQLSGKMSQDYD-SNKAIEHATAVAAAAYAIKSIEDSAISDQKKTGNEPKTSLVRI 65

Query: 64  KNVKEDNRTPPPRPAPEPDKIPQ--PFSVNSEQEKQRPIEYTTN---PSPA--------- 123
           K+ KE+     P    EP ++ +  P S  S  E++ P    T    P  A         
Sbjct: 66  KSKKEETAISKP----EPGRVSKLFPGSTKSTPEREHPDGAATTGKVPGKAPSIKKTPTF 125

Query: 124 AINNISGGGRTEPERAVAVPGK-PQTLPSETKADLWEKAELGKIQERYSVLLHCLSYLNE 183
           A   ++     +PE A   P + P    + T AD     +L K            +    
Sbjct: 126 ADKQMNSTDSIKPETAAPQPLRSPSIKNTPTVAD----KQLNKADNIKPETAGPSNETMR 185

Query: 184 QYPLLKLEKISDTRRWTKEFVTGKARRRTKPCANL------KHRRFMNSLSVFNAEGMKK 243
           Q       + +    W +  +T    R  K  A +      K ++  + LS   +E  KK
Sbjct: 186 QSATEPGTRKTQADIWEENKLTMLKERYEKQNATILSWESKKKKKTRHRLSTKESEIEKK 245

Query: 244 SKRIKGRRKLEEDMEFIKKIGGEARTKAEQKKKKEILKAKQRADIIRQTGKLPLACCC 279
             R+K +RK   DME IK+I   AR +AE++ + E+LK K++A+ IR+TGK P +C C
Sbjct: 246 --RVKAQRKFNRDMEHIKQIAEGARAQAEERYRNEVLKVKEKANAIRKTGKAPTSCFC 292

[Close]

BLAST of CmoCh04G017710 vs. NCBI nr
Match: gi|659091188|ref|XP_008446417.1| (PREDICTED: uncharacterized protein LOC103489168 isoform X1 [Cucumis melo])

HSP 1 Score: 229.2 bits (583), Expect = 9.0e-57
Identity = 146/310 (47.10%), Postives = 187/310 (60.32%), Query Frame = 1


Query: 2   FMDWLGRQFSRQMSRGNEFPDDGIEGVTAVAAAAFAILSVEESG---PIKNVDHPETSSF 61
           F +WLGRQFSRQMSRGNEF DDGIE V AVAAA FAI  VEES    P+K +D P++S+ 
Sbjct: 44  FGNWLGRQFSRQMSRGNEFSDDGIERVAAVAAAVFAIHLVEESEFSKPLKKIDRPKSSTL 103

Query: 62  QKTKNVKEDNRTPPPRPAPEPDKIPQPFSVN----------------SEQEKQRPIEYTT 121
            + + V+EDNRTPPPRPAPEPD+I +PFS++                +EQ+KQ+P    T
Sbjct: 104 PRIRIVEEDNRTPPPRPAPEPDRILRPFSIDVAKNPEEATGEKPAAKTEQQKQKPTGNIT 163

Query: 122 NPSPAAINNISGG-GRTEPERAVAVPGKP-------------QTLPSETKADLWEKAELG 181
            PSP  + + SG  GRTE E+ + +P  P             QT P ETKADLWEKAEL 
Sbjct: 164 FPSPPVVYDYSGDRGRTETEKPLPIPRPPTPPISRKPPTTPIQTRPEETKADLWEKAELA 223

Query: 182 KIQERYSVLLHCLSYLNEQYPLLKLEKISDTRRWTKEFVTGKARRRTKPCANLKHRRFMN 241
           KIQERY  +   +SY                  W       + ++R K     +  + + 
Sbjct: 224 KIQERYQKVNETISY------------------W-------ETKKREKAIRKFEASQVLG 283

Query: 242 SLSVFNAEGMKKSKRIKGRRKLEEDMEFIKKIGGEARTKAEQKKKKEILKAKQRADIIRQ 279
           +         K+S+R KGR+K EEDMEFIK+I GEAR+KA++KKK EILKA ++ADIIRQ
Sbjct: 284 T---------KRSEREKGRKKFEEDMEFIKQIAGEARSKADRKKKNEILKANRKADIIRQ 319

[Close]

BLAST of CmoCh04G017710 vs. NCBI nr
Match: gi|659091190|ref|XP_008446418.1| (PREDICTED: uncharacterized protein LOC103489168 isoform X2 [Cucumis melo])

HSP 1 Score: 228.0 bits (580), Expect = 2.0e-56
Identity = 146/309 (47.25%), Postives = 185/309 (59.87%), Query Frame = 1


Query: 2   FMDWLGRQFSRQMSRGNEFPDDGIEGVTAVAAAAFAILSVEESG---PIKNVDHPETSSF 61
           F +WLGRQFSRQMSRGNEF DDGIE V AVAAA FAI  VEES    P+K +D P++S+ 
Sbjct: 44  FGNWLGRQFSRQMSRGNEFSDDGIERVAAVAAAVFAIHLVEESEFSKPLKKIDRPKSSTL 103

Query: 62  QKTKNVKEDNRTPPPRPAPEPDKIPQPFS---------------VNSEQEKQRPIEYTTN 121
            + + V+EDNRTPPPRPAPEPD+I +PFS                 +EQ+KQ+P    T 
Sbjct: 104 PRIRIVEEDNRTPPPRPAPEPDRILRPFSNVAKNPEEATGEKPAAKTEQQKQKPTGNITF 163

Query: 122 PSPAAINNISGG-GRTEPERAVAVPGKP-------------QTLPSETKADLWEKAELGK 181
           PSP  + + SG  GRTE E+ + +P  P             QT P ETKADLWEKAEL K
Sbjct: 164 PSPPVVYDYSGDRGRTETEKPLPIPRPPTPPISRKPPTTPIQTRPEETKADLWEKAELAK 223

Query: 182 IQERYSVLLHCLSYLNEQYPLLKLEKISDTRRWTKEFVTGKARRRTKPCANLKHRRFMNS 241
           IQERY  +   +SY                  W       + ++R K     +  + + +
Sbjct: 224 IQERYQKVNETISY------------------W-------ETKKREKAIRKFEASQVLGT 283

Query: 242 LSVFNAEGMKKSKRIKGRRKLEEDMEFIKKIGGEARTKAEQKKKKEILKAKQRADIIRQT 279
                    K+S+R KGR+K EEDMEFIK+I GEAR+KA++KKK EILKA ++ADIIRQT
Sbjct: 284 ---------KRSEREKGRKKFEEDMEFIKQIAGEARSKADRKKKNEILKANRKADIIRQT 318

[Close]

BLAST of CmoCh04G017710 vs. NCBI nr
Match: gi|449434738|ref|XP_004135153.1| (PREDICTED: uncharacterized protein At3g61260 [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 7.8e-53
Identity = 142/309 (45.95%), Postives = 184/309 (59.55%), Query Frame = 1


Query: 2   FMDWLGRQFSRQMSRGNEFPDDGIEGVTAVAAAAFAILSVEESG---PIKNVDHPETSSF 61
           F +WLGRQFSRQMSRGNEF D G+E  TAVAAAAFAI  VEES    P+K +D P++SSF
Sbjct: 44  FGNWLGRQFSRQMSRGNEFSDVGMERATAVAAAAFAIHLVEESEFSKPVKKIDRPKSSSF 103

Query: 62  QKTKNVKEDNRTPPPRPAPEPDKIPQPFS---------------VNSEQEKQRPIEYTTN 121
            + K V+EDNR+PPPRPAPEPD+I +P S                 +EQ+KQ+PI   T 
Sbjct: 104 PRVKIVEEDNRSPPPRPAPEPDRILRPLSNVAKDPEAATGEKPAAKTEQQKQKPIGKITV 163

Query: 122 PSPAAINNISGG-GRTEPERAVAVPGKP-------------QTLPSETKADLWEKAELGK 181
           PSP  + + S   GRTE E+ + +P  P             QT P ETKAD+WEKAEL  
Sbjct: 164 PSPPVVYDYSRDRGRTETEKPLPIPRPPTPPISRKQPTAPIQTRPEETKADMWEKAEL-- 223

Query: 182 IQERYSVLLHCLSYLNEQYPLLKLEKISDTRRWTKEFVTGKARRRTKPCANLKHRRFMNS 241
                       + + E+Y     +K+++T  + +          TK     K  + +  
Sbjct: 224 ------------AKIQERY-----QKVNETISYWE----------TK-----KREKAICK 283

Query: 242 LSVFNAEGMKKSKRIKGRRKLEEDMEFIKKIGGEARTKAEQKKKKEILKAKQRADIIRQT 279
                 EG K+S+R KGR+K EEDMEFIK+I GEAR+KA+ KKK EILKA ++ADIIRQT
Sbjct: 284 FEASQVEGTKRSQREKGRKKFEEDMEFIKQIAGEARSKADHKKKNEILKANRKADIIRQT 318

[Close]

BLAST of CmoCh04G017710 vs. NCBI nr
Match: gi|1012354586|gb|KYP65773.1| (Uncharacterized protein At3g61260 family [Cajanus cajan])

HSP 1 Score: 75.9 bits (185), Expect = 1.3e-10
Identity = 85/281 (30.25%), Postives = 132/281 (46.98%), Query Frame = 1


Query: 4   DWLGRQFSRQMSRGNEFPDDGIEGVTAVAAAAFAI----LSVEESGPIKNVDHPETSSFQ 63
           +W  +QF+R   R  +     ++   AVAAAAFAI    +S ++S  +K       +S  
Sbjct: 31  NWFQKQFAR---RSGDHDSRDMDHAAAVAAAAFAINLQDVSEQKSETLK-------ASLT 90

Query: 64  KTKNVKEDNRTPPPRPAPEPDKIPQPFSVNSEQEKQRPIEYTTNPSPAAINNISGGGRTE 123
           KTK+  +  +   P  +    ++   F    ++++++P E  T PSP+ +   S     +
Sbjct: 91  KTKSKVDGTKPQIPLLSSASKRLSGSFRSKDDKDEKKPEEAIT-PSPS-MKKTSTFTNEK 150

Query: 124 PERAVAVPGK-PQTLPSETKADLWEKAELGKIQERYSVLLHCL-SYLNEQYPLLKLEKIS 183
           PE  +  P + P      TKA+ WEKAEL  I++RY  L   + S+ N+       +K+ 
Sbjct: 151 PETTMPDPVRQPIVTERHTKANEWEKAELEDIRQRYDDLREVIDSWQNK-------KKMK 210

Query: 184 DTRRWTKEFVTGKARRRTKPCANLKHRRFMNSLSVFNAEGMKKSKRIKGRRKLEEDMEFI 243
             R+  KE   G A+RR K   +     F N ++                         I
Sbjct: 211 ARRKLNKE-ERGLAQRRMKASED-----FQNKITA------------------------I 262

Query: 244 KKIGGEARTKAEQKKKKEILKAKQRADIIRQTGKLPLACCC 279
            KI   ARTKAE+ +K E LKAK++A++IR TGKLP  C C
Sbjct: 271 DKIAEGARTKAEESRKNEELKAKEKANVIRTTGKLPGICFC 262

[Close]

BLAST of CmoCh04G017710 vs. NCBI nr
Match: gi|645229599|ref|XP_008221536.1| (PREDICTED: uncharacterized protein At3g61260-like isoform X1 [Prunus mume])

HSP 1 Score: 73.6 bits (179), Expect = 6.3e-10
Identity = 86/302 (28.48%), Postives = 136/302 (45.03%), Query Frame = 1


Query: 4   DWLGRQFSRQMSRGNEFPDDGIEGVTAVAAAAFAILSVEESG--PIKNVDHPETSSFQKT 63
           +W  RQ S +MS+  +  +  IE  TAVAAAA+AI S+E+S     K   +   +S  + 
Sbjct: 42  NWFQRQLSGKMSQDYD-SNKAIEHATAVAAAAYAIKSIEDSAISDQKKTGNEPKTSLVRI 101

Query: 64  KNVKEDNRTPPPRPAPEPDKIPQ--PFSVNSEQEKQRPI-EYTTNPSPAAINNISGGGRT 123
           K+ KE+     P    EP ++ +  P S  S  E++ P    TT   P    +I    + 
Sbjct: 102 KSKKEETAISKP----EPGRVSKLFPGSTKSTPEREHPDGTATTGKVPGKAPSI----KK 161

Query: 124 EPERAVAVPGKPQTLPSETKADLWEKAELGKIQERYSVLLHCLSYLNEQYPLLKLEKISD 183
            P  A        ++  ET A   +      I+   +V    L+  +     +K E    
Sbjct: 162 TPTFADKQLNSTDSIKPETAAP--QPLRSPSIKNTLTVADKQLNKTDN----IKPETAGP 221

Query: 184 TRRWTKEFVTGKARRRTKP-------CANLKHRRFMNSLSVFNAEGMKKSK--------- 243
           +    ++  T    R+T+         A LK R    + ++ + E  KK K         
Sbjct: 222 SNETMRQSATEPGTRKTQADIWEENKLAMLKERYEKQNATILSWESKKKKKTRRRLSTKE 281

Query: 244 ------RIKGRRKLEEDMEFIKKIGGEARTKAEQKKKKEILKAKQRADIIRQTGKLPLAC 279
                 R+K +RK   DME IK+I   AR +AE++ + E+LKAK++A+ IR+TGK P +C
Sbjct: 282 SEIEKKRVKAQRKFNRDMEHIKQIAEGARAQAEERYRNEVLKAKEKANAIRKTGKAPTSC 328

The following BLAST results are available for this feature:

BLAST of CmoCh04G017710 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G017710 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSV0_CUCSA	5.5e-53	45.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606540 PE=4 SV=1	[more]
A0A151TFH6_CAJCA	8.8e-11	30.25	Uncharacterized protein At3g61260 family OS=Cajanus cajan GN=KK1_012037 PE=4 SV=...	[more]
V4VHG2_9ROSI	4.4e-10	30.77	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033969mg PE=4 SV=1	[more]
G7JHG5_MEDTR	2.8e-09	34.16	Carboxy-terminal region remorin OS=Medicago truncatula GN=MTR_4g082910 PE=4 SV=1	[more]
M5XIQ5_PRUPE	8.3e-09	28.86	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017471mg PE=4 S...	[more]

BLAST of CmoCh04G017710 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmoCh04G017710 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659091188\|ref\|XP_008446417.1\|	9.0e-57	47.10	PREDICTED: uncharacterized protein LOC103489168 isoform X1 [Cucumis melo]	[more]
gi\|659091190\|ref\|XP_008446418.1\|	2.0e-56	47.25	PREDICTED: uncharacterized protein LOC103489168 isoform X2 [Cucumis melo]	[more]
gi\|449434738\|ref\|XP_004135153.1\|	7.8e-53	45.95	PREDICTED: uncharacterized protein At3g61260 [Cucumis sativus]	[more]
gi\|1012354586\|gb\|KYP65773.1\|	1.3e-10	30.25	Uncharacterized protein At3g61260 family [Cajanus cajan]	[more]
gi\|645229599\|ref\|XP_008221536.1\|	6.3e-10	28.48	PREDICTED: uncharacterized protein At3g61260-like isoform X1 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005516	Remorin_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016798	hydrolase activity, acting on glycosyl bonds

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G017710.1	CmoCh04G017710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 136..273 score: 2.
None	No IPR available	PANTHER	PTHR31471	FAMILY NOT NAMED	coord: 136..152 score: 1.1E-13coord: 217..278 score: 1.1E-13coord: 172..199 score: 1.1
None	No IPR available	PANTHER	PTHR31471:SF5	F7A19.1 PROTEIN-RELATED	coord: 172..199 score: 1.1E-13coord: 136..152 score: 1.1E-13coord: 217..278 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G017710	Cucsa.284650	Cucumber (Gy14) v1	cgycmoB0797
CmoCh04G017710	CmaCh18G011180	Cucurbita maxima (Rimu)	cmacmoB423
CmoCh04G017710	CmaCh04G016900	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G017710	Cla010224	Watermelon (97103) v1	cmowmB698
CmoCh04G017710	Csa5G606540	Cucumber (Chinese Long) v2	cmocuB715
CmoCh04G017710	MELO3C012137	Melon (DHL92) v3.5.1	cmomeB645
CmoCh04G017710	ClCG05G023850	Watermelon (Charleston Gray)	cmowcgB659
CmoCh04G017710	CSPI05G24150	Wild cucumber (PI 183967)	cmocpiB723
CmoCh04G017710	Lsi04G003770	Bottle gourd (USVL1VR-Ls)	cmolsiB671
CmoCh04G017710	Cp4.1LG09g02160	Cucurbita pepo (Zucchini)	cmocpeB647
CmoCh04G017710	Cp4.1LG01g12240	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G017710	MELO3C012137.2	Melon (DHL92) v3.6.1	cmomedB735
CmoCh04G017710	CsaV3_5G033170	Cucumber (Chinese Long) v3	cmocucB0847
CmoCh04G017710	Cla97C05G105860	Watermelon (97103) v2	cmowmbB734
CmoCh04G017710	Bhi07G001236	Wax gourd	cmowgoB0903
CmoCh04G017710	CsGy5G023700	Cucumber (Gy14) v2	cgybcmoB627
CmoCh04G017710	Carg14378	Silver-seed gourd	carcmoB0343
CmoCh04G017710	Carg17299	Silver-seed gourd	carcmoB0142

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G017710	CmoCh18G011390	Cucurbita moschata (Rifu)	cmocmoB340

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G017710	Cucumber (Chinese Long) v3	cmocucB0798
CmoCh04G017710	Cucumber (Chinese Long) v3	cmocucB0799
CmoCh04G017710	Cucumber (Chinese Long) v3	cmocucB0864
CmoCh04G017710	Watermelon (97103) v2	cmowmbB726
CmoCh04G017710	Wax gourd	cmowgoB0841
CmoCh04G017710	Wax gourd	cmowgoB0885
CmoCh04G017710	Wax gourd	cmowgoB0917
CmoCh04G017710	Cucurbita moschata (Rifu)	cmocmoB124
CmoCh04G017710	Cucurbita moschata (Rifu)	cmocmoB188
CmoCh04G017710	Cucurbita moschata (Rifu)	cmocmoB363
CmoCh04G017710	Cucumber (Gy14) v1	cgycmoB0270
CmoCh04G017710	Cucumber (Gy14) v1	cgycmoB0591
CmoCh04G017710	Cucurbita maxima (Rimu)	cmacmoB481
CmoCh04G017710	Wild cucumber (PI 183967)	cmocpiB685
CmoCh04G017710	Cucumber (Chinese Long) v2	cmocuB673
CmoCh04G017710	Cucumber (Chinese Long) v2	cmocuB674
CmoCh04G017710	Melon (DHL92) v3.5.1	cmomeB663
CmoCh04G017710	Melon (DHL92) v3.5.1	cmomeB666
CmoCh04G017710	Watermelon (Charleston Gray)	cmowcgB652
CmoCh04G017710	Watermelon (97103) v1	cmowmB716
CmoCh04G017710	Watermelon (97103) v1	cmowmB741
CmoCh04G017710	Bottle gourd (USVL1VR-Ls)	cmolsiB633
CmoCh04G017710	Cucumber (Gy14) v2	cgybcmoB119
CmoCh04G017710	Cucumber (Gy14) v2	cgybcmoB120
CmoCh04G017710	Melon (DHL92) v3.6.1	cmomedB749
CmoCh04G017710	Melon (DHL92) v3.6.1	cmomedB753
CmoCh04G017710	Silver-seed gourd	carcmoB0071