CmoCh04G017170 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G017170
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUbiquitin-conjugating enzyme
LocationCmo_Chr04 : 8698400 .. 8701086 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGATATCATGGAAGATAGAGGCACCTCCTTCTCATTTGATTGAACTTGTTTCATGTTTCTCATCTAACTTTCACGTGGTTGAATTTTCATCTTTTGTATCCTTCTTTAACGGTCCTTTTTCATTTTTCTGCATTGGCCATATGCATTTTTAACAATTGAAGCTAAGATTGTTGTCTTGGTCTATTTTCAGCCGGTGAGGATGTCGACTCCTGCAAGGAAGAGACTGATGAGAGACTTCAGGAGATTGCAGCAAGATCCACCTGCTGGCATCAGTGGTGCGCCACAAGACAATAATATCATGCTATGGAATGCTGTCATATTTGGGTCAGCTGGGAAAATAAATAATGACCTTGTTCTTTCTTCTTATCAGAATTTGTGCAGGGCAATTGCTTCTTTGACTACTGATGCTTTGGTCTTTGACTGTTTTTTTTGTTGGCTTTTGCAGGCCAGATGATACGCCTTGGGATGGAGGTATTCTTACTTTCTGTCTTTCTTGGCCTATTTTTCTTCTTTAGAATAAACAGCGTTGTATTAGGATCAAGTTCTATAGTAATTTACTCATTTCTTCTTTGATGGTTTCACTTTGTTTTTCTGTCCAAAACTATAACTAATGAGGATCTTTTTTCACTGCAGCTATGTAGATATGTATGTTGGCTTTATATCTAATAGCTTTGTACAGTTAAATTGATTTGTCAATTTTAAAATTATCCGGTCCTGATTTGCATGATATTTTGTTTGTATTACATGTTCTTCTCTTTAAGCTTTTTACCGTTTGGATATGGATGTGTGTTGTATTTTCTGGTGGAGAACTCAAAGAATAATTAGAACTTTCTAAATGTCTGGTTGTGATTTCCTGGTTCTTTAAATTCAAAATGTTAAGTTGCTTTCATCCTTCCTGGTGCGAGTTATGGGACTGTATTCTGGAGGATCTGTGTATTCTGATGTCCTTTTCTAAACACTGAAATGGACATTAGCATCTTGTTTACTTTTCTGAGAATTTTGATTAATTTTGCATCTTATTTTGGTATTTTTCCACAAGTATTTTTTTTATGAACTCCTCATGTAGTTTATGAATTGTAATTTGGCTACCCTTTTTTTGAGTGTTGACCAGGTACGTTTAAGCTGACCCTTCAGTTCACGGAGGATTATCCAAATAAGCCACCAACAGTTCGCTTTGTGTCTAGAATGTTCCACCCTAATAGTAAGTTCACAATATCAAAGAATGTGCCCTTTACAAACAAGTTATGCTTTATGTGGTTCATTCTGGGTCAATTTGAGAGCTTATTATAGTCTCCATTGGCACTGGGTTAAGAAGATACCTAATTCTCCTGTAGATTCTTTCTCCAGCTACTTATTGTTAAGAGCGTGTTGCTTACTATGTTTATATGCTGTGCTTACCCAATTTCATTGTATATTTTTCATATTGTGCATAGGTTATTTTCTTTGTCTTACAAATAAAAAGCAGTCTATTGTGTTTCCATCATCAAACTTTTATATGAACTCGATGTGTTATGTTTGATATATATGGGTATGTTTGACTTGGGCCTGGATGATTTTAATGATTGGAAGGCAAGAGAGAGAAAGTATAACTATCTGGTAAAAAGACAAAGTAAATGTTTATCTTAGGGTACATTGTAAATTATGACAATTTTATTCTTAATTTGTTCTGTACATGTTTCTAAGCTTACACTTTGTTTGTGCGTTTGCCTTTTCCATTGCCTTCAGTTTATGCTGATGGAAGCATATGTTTGGACATTCTGCAAAATCAATGGAGCCCAATCTATGATGTAGCAGCTATACTCACCTCTATTCAGGTATTCCTAATTGATTTAACCTTAATAAATGTCAAGCGTATTTTTAATTTATGTATGATTAATAGCTCTTTTTATCACAAATGAAAAGCATGCCACTGCTCCTGTACTATGCCCTATCCTAGAAGTAGCACGCATATGGTTCATGTGTCCTCATGATGCTCATTGTAACTTATTTATGGAACTGGCTGTGCGCGCAAGAATTTACTTAGTACAGTTGCCCTTGCCACTGACCAGCCATGCCATAAAAGCACTCATTCCTTTAGTTTTTGTTCTTATTTTCTGAATTTGTGGCATATGACAGTTTAGATTCTTTTGATTTATTGATTTAGTTTATTATTTGACATTTAGGATCAAGTATAAAGAACAGGCCTCAAAAAAAGTATAAGAACTGGAATTATCTTGCCTGATTATCTGATTGGAATTTGAGACCTACTTAAGAAATTGTATCTATTGTCCATATTCTATATTTTTTATGATACCATTAAAATATCCAACACTGCAAGTATACTACTGCCCTCCTAGAAAAGGGAGAAAGGAACGTAGGTTTGTGAGATGAAGAATTATCTGCCGATTTATTTGGTGTGGGGATTGAGTATGTGATAATATTGTTGTCAGTATTGGAAAAATGACTTGTGGAATTTAGTGTTAAATGGCTCGGCGGTGCTTTTCATTGACTTGCAAGCTCAATGTTCGTTCGTTCGTTTGTTTATTTTTAATCCCAATAACATTTTCCGTTGTAGTCGTTGCTGTGCGACCCCAATCCAAACTCACCTGCTAATTCTGAAGCTGCTCGGATGTTTAGCGAGAACAAGCGTGATTACAATAGGAGAGTACGTGAGATCGTGGAACAGAGTTGGACTGCTGATTAG

mRNA sequence

ATGGTGATATCATGGAAGATAGAGGCACCTCCTTCTCATTTGATTGAACTTGTTTCATGTTTCTCATCTAACTTTCACGTGCCGGTGAGGATGTCGACTCCTGCAAGGAAGAGACTGATGAGAGACTTCAGGAGATTGCAGCAAGATCCACCTGCTGGCATCAGTGGTGCGCCACAAGACAATAATATCATGCTATGGAATGCTGTCATATTTGGGCCAGATGATACGCCTTGGGATGGAGGTACGTTTAAGCTGACCCTTCAGTTCACGGAGGATTATCCAAATAAGCCACCAACAGTTCGCTTTGTGTCTAGAATGTTCCACCCTAATATTTATGCTGATGGAAGCATATGTTTGGACATTCTGCAAAATCAATGGAGCCCAATCTATGATGTAGCAGCTATACTCACCTCTATTCAGTCGTTGCTGTGCGACCCCAATCCAAACTCACCTGCTAATTCTGAAGCTGCTCGGATGTTTAGCGAGAACAAGCGTGATTACAATAGGAGAGTACGTGAGATCGTGGAACAGAGTTGGACTGCTGATTAG

Coding sequence (CDS)

ATGGTGATATCATGGAAGATAGAGGCACCTCCTTCTCATTTGATTGAACTTGTTTCATGTTTCTCATCTAACTTTCACGTGCCGGTGAGGATGTCGACTCCTGCAAGGAAGAGACTGATGAGAGACTTCAGGAGATTGCAGCAAGATCCACCTGCTGGCATCAGTGGTGCGCCACAAGACAATAATATCATGCTATGGAATGCTGTCATATTTGGGCCAGATGATACGCCTTGGGATGGAGGTACGTTTAAGCTGACCCTTCAGTTCACGGAGGATTATCCAAATAAGCCACCAACAGTTCGCTTTGTGTCTAGAATGTTCCACCCTAATATTTATGCTGATGGAAGCATATGTTTGGACATTCTGCAAAATCAATGGAGCCCAATCTATGATGTAGCAGCTATACTCACCTCTATTCAGTCGTTGCTGTGCGACCCCAATCCAAACTCACCTGCTAATTCTGAAGCTGCTCGGATGTTTAGCGAGAACAAGCGTGATTACAATAGGAGAGTACGTGAGATCGTGGAACAGAGTTGGACTGCTGATTAG
BLAST of CmoCh04G017170 vs. Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 1.9e-84
Identity = 146/152 (96.05%), Postives = 151/152 (99.34%), Query Frame = 1

Query: 31  MSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 90
           MSTPARKRLMRDF+RLQ DPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 91  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 150
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 151 PANSEAARMFSENKRDYNRRVREIVEQSWTAD 183
           PANSEAARMFSENKR+YNRRVRE+VEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREVVEQSWTAD 152

BLAST of CmoCh04G017170 vs. Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 1.9e-84
Identity = 146/152 (96.05%), Postives = 152/152 (100.00%), Query Frame = 1

Query: 31  MSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 90
           MSTPARKRLMRDF+RLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 91  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 150
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 151 PANSEAARMFSENKRDYNRRVREIVEQSWTAD 183
           PANSEAARMFSE+KR+YNRRVRE+VEQSWTAD
Sbjct: 121 PANSEAARMFSESKREYNRRVREVVEQSWTAD 152

BLAST of CmoCh04G017170 vs. Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 5.6e-84
Identity = 145/152 (95.39%), Postives = 150/152 (98.68%), Query Frame = 1

Query: 31  MSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 90
           MSTPARKRLMRDF+RLQQDPPAGISGAP DNNI LWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFT 60

Query: 91  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 150
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 151 PANSEAARMFSENKRDYNRRVREIVEQSWTAD 183
           PANSEAARM+SENKR+YNR+VRE+VEQSWTAD
Sbjct: 121 PANSEAARMYSENKREYNRKVREVVEQSWTAD 152

BLAST of CmoCh04G017170 vs. Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 9.6e-84
Identity = 144/152 (94.74%), Postives = 152/152 (100.00%), Query Frame = 1

Query: 31  MSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 90
           MSTPARKRLMRDF+RLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 91  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 150
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 151 PANSEAARMFSENKRDYNRRVREIVEQSWTAD 183
           PANSEAARM+SE+KR+YNRRVR++VEQSWTAD
Sbjct: 121 PANSEAARMYSESKREYNRRVRDVVEQSWTAD 152

BLAST of CmoCh04G017170 vs. Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 4.8e-75
Identity = 130/149 (87.25%), Postives = 143/149 (95.97%), Query Frame = 1

Query: 31  MSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 90
           M+TPA+KRLM DF+RLQ+DPP GISGAPQDNNIM WNA+IFGP+DTPWDGGTFKLTL FT
Sbjct: 1   MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60

Query: 91  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 150
           EDYPNKPP VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA+LTSIQSLLCDPNP+S
Sbjct: 61  EDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDS 120

Query: 151 PANSEAARMFSENKRDYNRRVREIVEQSW 180
           PAN+EAAR+FSENKR+YNR+V EIVEQS+
Sbjct: 121 PANAEAARLFSENKREYNRKVIEIVEQSY 149

BLAST of CmoCh04G017170 vs. TrEMBL
Match: A0A0A0KQJ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604380 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 7.1e-86
Identity = 153/155 (98.71%), Postives = 155/155 (100.00%), Query Frame = 1

Query: 28  PVRMSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL 87
           PVRMSTPARKRLMRDF+RLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL
Sbjct: 73  PVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL 132

Query: 88  QFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN 147
           QFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN
Sbjct: 133 QFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN 192

Query: 148 PNSPANSEAARMFSENKRDYNRRVREIVEQSWTAD 183
           PNSPANSEAARMFSENKR+YNRRVREIVEQSWTAD
Sbjct: 193 PNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 227

BLAST of CmoCh04G017170 vs. TrEMBL
Match: D7TND2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01770 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 4.6e-85
Identity = 152/154 (98.70%), Postives = 154/154 (100.00%), Query Frame = 1

Query: 29  VRMSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQ 88
           VRMSTPARKRLMRDF+RLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQ
Sbjct: 38  VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQ 97

Query: 89  FTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 148
           FTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP
Sbjct: 98  FTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 157

Query: 149 NSPANSEAARMFSENKRDYNRRVREIVEQSWTAD 183
           NSPANSEAARMFSENKR+YNRRVREIVEQSWTAD
Sbjct: 158 NSPANSEAARMFSENKREYNRRVREIVEQSWTAD 191

BLAST of CmoCh04G017170 vs. TrEMBL
Match: M0ZLF5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001314 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 6.1e-85
Identity = 153/176 (86.93%), Postives = 164/176 (93.18%), Query Frame = 1

Query: 7   IEAPPSHLIELVSCFSSNFHVPVRMSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLW 66
           + + P   IE+++ F++     VRMSTPARKRLMRDF+RLQQDPPAGISGAP DNNIMLW
Sbjct: 28  LNSEPITFIEILAAFNTQ---AVRMSTPARKRLMRDFKRLQQDPPAGISGAPYDNNIMLW 87

Query: 67  NAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQW 126
           NAVIFGPDDTPWDGGTFKLTLQF+EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQW
Sbjct: 88  NAVIFGPDDTPWDGGTFKLTLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQW 147

Query: 127 SPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKRDYNRRVREIVEQSWTAD 183
           SPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKR+YNR+VREIVEQSWTAD
Sbjct: 148 SPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRKVREIVEQSWTAD 200

BLAST of CmoCh04G017170 vs. TrEMBL
Match: A0A072TRF9_MEDTR (Ubiquitin-conjugating enzyme OS=Medicago truncatula GN=MTR_8g468530 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.0e-84
Identity = 152/162 (93.83%), Postives = 156/162 (96.30%), Query Frame = 1

Query: 21  FSSNFHVPVRMSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDG 80
           F+    +  RMSTPARKRLMRDF+RLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDG
Sbjct: 7   FAIELLMVARMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDG 66

Query: 81  GTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 140
           GTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ
Sbjct: 67  GTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 126

Query: 141 SLLCDPNPNSPANSEAARMFSENKRDYNRRVREIVEQSWTAD 183
           SLLCDPNPNSPANSEAARMFSENKR+YNRRVREIVEQSWTAD
Sbjct: 127 SLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 168

BLAST of CmoCh04G017170 vs. TrEMBL
Match: A0A061FY21_THECC (Ubiquiting-conjugating enzyme 2 OS=Theobroma cacao GN=TCM_011789 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 5.1e-84
Identity = 150/152 (98.68%), Postives = 152/152 (100.00%), Query Frame = 1

Query: 31  MSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 90
           MSTPARKRLMRDF+RLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60

Query: 91  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 150
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 151 PANSEAARMFSENKRDYNRRVREIVEQSWTAD 183
           PANSEAARMFSENKR+YNRRVREIVEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 152

BLAST of CmoCh04G017170 vs. TAIR10
Match: AT2G02760.1 (AT2G02760.1 ubiquiting-conjugating enzyme 2)

HSP 1 Score: 313.2 bits (801), Expect = 1.1e-85
Identity = 146/152 (96.05%), Postives = 152/152 (100.00%), Query Frame = 1

Query: 31  MSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 90
           MSTPARKRLMRDF+RLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 91  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 150
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 151 PANSEAARMFSENKRDYNRRVREIVEQSWTAD 183
           PANSEAARMFSE+KR+YNRRVRE+VEQSWTAD
Sbjct: 121 PANSEAARMFSESKREYNRRVREVVEQSWTAD 152

BLAST of CmoCh04G017170 vs. TAIR10
Match: AT1G14400.1 (AT1G14400.1 ubiquitin carrier protein 1)

HSP 1 Score: 310.8 bits (795), Expect = 5.4e-85
Identity = 144/152 (94.74%), Postives = 152/152 (100.00%), Query Frame = 1

Query: 31  MSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 90
           MSTPARKRLMRDF+RLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKL+LQF+
Sbjct: 1   MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 91  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 150
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 151 PANSEAARMFSENKRDYNRRVREIVEQSWTAD 183
           PANSEAARM+SE+KR+YNRRVR++VEQSWTAD
Sbjct: 121 PANSEAARMYSESKREYNRRVRDVVEQSWTAD 152

BLAST of CmoCh04G017170 vs. TAIR10
Match: AT5G62540.1 (AT5G62540.1 ubiquitin-conjugating enzyme 3)

HSP 1 Score: 282.0 bits (720), Expect = 2.7e-76
Identity = 130/149 (87.25%), Postives = 143/149 (95.97%), Query Frame = 1

Query: 31  MSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 90
           M+TPA+KRLM DF+RLQ+DPP GISGAPQDNNIM WNA+IFGP+DTPWDGGTFKLTL FT
Sbjct: 1   MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60

Query: 91  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 150
           EDYPNKPP VRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA+LTSIQSLLCDPNP+S
Sbjct: 61  EDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDS 120

Query: 151 PANSEAARMFSENKRDYNRRVREIVEQSW 180
           PAN+EAAR+FSENKR+YNR+V EIVEQS+
Sbjct: 121 PANAEAARLFSENKREYNRKVIEIVEQSY 149

BLAST of CmoCh04G017170 vs. TAIR10
Match: AT4G27960.2 (AT4G27960.2 ubiquitin conjugating enzyme 9)

HSP 1 Score: 144.8 bits (364), Expect = 5.1e-35
Identity = 68/161 (42.24%), Postives = 98/161 (60.87%), Query Frame = 1

Query: 20  CFSSNFHVPVRMSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWD 79
           C   N+++   +   A KR++++ + LQ+DPP   S  P   ++  W A I GP D+P+ 
Sbjct: 17  CRVFNWNLDRGILEMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYS 76

Query: 80  GGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSI 139
           GG F +T+ F  DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP   ++ +L SI
Sbjct: 77  GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSI 136

Query: 140 QSLLCDPNPNSPANSEAARMFSENKRDYNRRVREIVEQSWT 181
            SLL DPNP+ P   E A M+  +K  Y     E   ++WT
Sbjct: 137 CSLLTDPNPDDPLVPEIAHMYKTDKNKY-----ESTARTWT 172

BLAST of CmoCh04G017170 vs. TAIR10
Match: AT5G53300.1 (AT5G53300.1 ubiquitin-conjugating enzyme 10)

HSP 1 Score: 142.9 bits (359), Expect = 1.9e-34
Identity = 66/146 (45.21%), Postives = 92/146 (63.01%), Query Frame = 1

Query: 35  ARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYP 94
           A KR++++ + LQ+DPP   S  P   ++  W A I GP ++P+ GG F +T+ F  DYP
Sbjct: 2   ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61

Query: 95  NKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANS 154
            KPP V F +++FHPNI ++GSICLDIL+ QWSP   ++ +L SI SLL DPNP+ P   
Sbjct: 62  FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 121

Query: 155 EAARMFSENKRDYNRRVREIVEQSWT 181
           E A M+  +K  Y     E   +SWT
Sbjct: 122 EIAHMYKTDKNKY-----ESTARSWT 142

BLAST of CmoCh04G017170 vs. NCBI nr
Match: gi|700196716|gb|KGN51893.1| (hypothetical protein Csa_5G604380 [Cucumis sativus])

HSP 1 Score: 324.7 bits (831), Expect = 1.0e-85
Identity = 153/155 (98.71%), Postives = 155/155 (100.00%), Query Frame = 1

Query: 28  PVRMSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL 87
           PVRMSTPARKRLMRDF+RLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL
Sbjct: 73  PVRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTL 132

Query: 88  QFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN 147
           QFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN
Sbjct: 133 QFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN 192

Query: 148 PNSPANSEAARMFSENKRDYNRRVREIVEQSWTAD 183
           PNSPANSEAARMFSENKR+YNRRVREIVEQSWTAD
Sbjct: 193 PNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 227

BLAST of CmoCh04G017170 vs. NCBI nr
Match: gi|296086416|emb|CBI32005.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 322.0 bits (824), Expect = 6.6e-85
Identity = 152/154 (98.70%), Postives = 154/154 (100.00%), Query Frame = 1

Query: 29  VRMSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQ 88
           VRMSTPARKRLMRDF+RLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQ
Sbjct: 38  VRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQ 97

Query: 89  FTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 148
           FTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP
Sbjct: 98  FTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 157

Query: 149 NSPANSEAARMFSENKRDYNRRVREIVEQSWTAD 183
           NSPANSEAARMFSENKR+YNRRVREIVEQSWTAD
Sbjct: 158 NSPANSEAARMFSENKREYNRRVREIVEQSWTAD 191

BLAST of CmoCh04G017170 vs. NCBI nr
Match: gi|922335550|ref|XP_013445765.1| (ubiquitin-conjugating enzyme [Medicago truncatula])

HSP 1 Score: 320.9 bits (821), Expect = 1.5e-84
Identity = 152/162 (93.83%), Postives = 156/162 (96.30%), Query Frame = 1

Query: 21  FSSNFHVPVRMSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDG 80
           F+    +  RMSTPARKRLMRDF+RLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDG
Sbjct: 7   FAIELLMVARMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDG 66

Query: 81  GTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 140
           GTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ
Sbjct: 67  GTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQ 126

Query: 141 SLLCDPNPNSPANSEAARMFSENKRDYNRRVREIVEQSWTAD 183
           SLLCDPNPNSPANSEAARMFSENKR+YNRRVREIVEQSWTAD
Sbjct: 127 SLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 168

BLAST of CmoCh04G017170 vs. NCBI nr
Match: gi|645229882|ref|XP_008221668.1| (PREDICTED: ubiquitin-conjugating enzyme E2 2-like [Prunus mume])

HSP 1 Score: 320.9 bits (821), Expect = 1.5e-84
Identity = 151/154 (98.05%), Postives = 154/154 (100.00%), Query Frame = 1

Query: 29  VRMSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQ 88
           +RMSTPARKRLMRDF+RLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQ
Sbjct: 1   MRMSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQ 60

Query: 89  FTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 148
           FTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP
Sbjct: 61  FTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 120

Query: 149 NSPANSEAARMFSENKRDYNRRVREIVEQSWTAD 183
           NSPANSEAARMFSENKR+YNRRVREIVEQSWTAD
Sbjct: 121 NSPANSEAARMFSENKREYNRRVREIVEQSWTAD 154

BLAST of CmoCh04G017170 vs. NCBI nr
Match: gi|659091014|ref|XP_008446323.1| (PREDICTED: ubiquitin-conjugating enzyme E2 2-like [Cucumis melo])

HSP 1 Score: 319.7 bits (818), Expect = 3.3e-84
Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 1

Query: 31  MSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 90
           MSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT
Sbjct: 1   MSTPARKRLMRDFRRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFT 60

Query: 91  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 150
           EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS
Sbjct: 61  EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 120

Query: 151 PANSEAARMFSENKRDYNRRVREIVEQSWTAD 183
           PANSEAARMFSENKR+YNRRVREIVEQSWTAD
Sbjct: 121 PANSEAARMFSENKREYNRRVREIVEQSWTAD 152

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
UBC2_MEDSA1.9e-8496.05Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1[more]
UBC2_ARATH1.9e-8496.05Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1[more]
UBC2_WHEAT5.6e-8495.39Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1[more]
UBC1_ARATH9.6e-8494.74Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1[more]
UBC3_ARATH4.8e-7587.25Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KQJ6_CUCSA7.1e-8698.71Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604380 PE=3 SV=1[more]
D7TND2_VITVI4.6e-8598.70Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01770 PE=3 SV=... [more]
M0ZLF5_SOLTU6.1e-8586.93Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001314 PE=3 SV=1[more]
A0A072TRF9_MEDTR1.0e-8493.83Ubiquitin-conjugating enzyme OS=Medicago truncatula GN=MTR_8g468530 PE=3 SV=1[more]
A0A061FY21_THECC5.1e-8498.68Ubiquiting-conjugating enzyme 2 OS=Theobroma cacao GN=TCM_011789 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT2G02760.11.1e-8596.05 ubiquiting-conjugating enzyme 2[more]
AT1G14400.15.4e-8594.74 ubiquitin carrier protein 1[more]
AT5G62540.12.7e-7687.25 ubiquitin-conjugating enzyme 3[more]
AT4G27960.25.1e-3542.24 ubiquitin conjugating enzyme 9[more]
AT5G53300.11.9e-3445.21 ubiquitin-conjugating enzyme 10[more]
Match NameE-valueIdentityDescription
gi|700196716|gb|KGN51893.1|1.0e-8598.71hypothetical protein Csa_5G604380 [Cucumis sativus][more]
gi|296086416|emb|CBI32005.3|6.6e-8598.70unnamed protein product [Vitis vinifera][more]
gi|922335550|ref|XP_013445765.1|1.5e-8493.83ubiquitin-conjugating enzyme [Medicago truncatula][more]
gi|645229882|ref|XP_008221668.1|1.5e-8498.05PREDICTED: ubiquitin-conjugating enzyme E2 2-like [Prunus mume][more]
gi|659091014|ref|XP_008446323.1|3.3e-8499.34PREDICTED: ubiquitin-conjugating enzyme E2 2-like [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G017170.1CmoCh04G017170.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 38..174
score: 6.4
IPR000608Ubiquitin-conjugating enzyme E2PROFILEPS50127UBIQUITIN_CONJUGAT_2coord: 37..169
score: 46
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 19..177
score: 3.7
IPR016135Ubiquitin-conjugating enzyme/RWD-likeunknownSSF54495UBC-likecoord: 28..180
score: 4.2
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 107..122
scor
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 14..182
score: 8.8E
NoneNo IPR availablePANTHERPTHR24067:SF120UBIQUITIN-CONJUGATING ENZYME E2 1-RELATEDcoord: 14..182
score: 8.8E
NoneNo IPR availableSMARTSM00212ubc_7coord: 37..180
score: 1.9

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G017170Wild cucumber (PI 183967)cmocpiB687
CmoCh04G017170Wild cucumber (PI 183967)cmocpiB689
CmoCh04G017170Wild cucumber (PI 183967)cmocpiB723
CmoCh04G017170Wild cucumber (PI 183967)cmocpiB738
CmoCh04G017170Cucumber (Chinese Long) v2cmocuB673
CmoCh04G017170Cucumber (Chinese Long) v2cmocuB676
CmoCh04G017170Cucumber (Chinese Long) v2cmocuB715
CmoCh04G017170Cucumber (Chinese Long) v2cmocuB730
CmoCh04G017170Melon (DHL92) v3.5.1cmomeB630
CmoCh04G017170Melon (DHL92) v3.5.1cmomeB645
CmoCh04G017170Melon (DHL92) v3.5.1cmomeB659
CmoCh04G017170Melon (DHL92) v3.5.1cmomeB666
CmoCh04G017170Watermelon (Charleston Gray)cmowcgB609
CmoCh04G017170Watermelon (Charleston Gray)cmowcgB659
CmoCh04G017170Watermelon (Charleston Gray)cmowcgB669
CmoCh04G017170Watermelon (97103) v1cmowmB647
CmoCh04G017170Watermelon (97103) v1cmowmB698
CmoCh04G017170Watermelon (97103) v1cmowmB741
CmoCh04G017170Cucurbita pepo (Zucchini)cmocpeB647
CmoCh04G017170Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G017170Bottle gourd (USVL1VR-Ls)cmolsiB642
CmoCh04G017170Bottle gourd (USVL1VR-Ls)cmolsiB644
CmoCh04G017170Bottle gourd (USVL1VR-Ls)cmolsiB671
CmoCh04G017170Bottle gourd (USVL1VR-Ls)cmolsiB687
CmoCh04G017170Cucumber (Gy14) v2cgybcmoB119
CmoCh04G017170Cucumber (Gy14) v2cgybcmoB627
CmoCh04G017170Cucumber (Gy14) v2cgybcmoB644
CmoCh04G017170Melon (DHL92) v3.6.1cmomedB718
CmoCh04G017170Melon (DHL92) v3.6.1cmomedB735
CmoCh04G017170Melon (DHL92) v3.6.1cmomedB753
CmoCh04G017170Silver-seed gourdcarcmoB0142
CmoCh04G017170Silver-seed gourdcarcmoB0955
CmoCh04G017170Silver-seed gourdcarcmoB1138
CmoCh04G017170Cucumber (Chinese Long) v3cmocucB0798
CmoCh04G017170Cucumber (Chinese Long) v3cmocucB0847
CmoCh04G017170Cucumber (Chinese Long) v3cmocucB0864
CmoCh04G017170Watermelon (97103) v2cmowmbB688
CmoCh04G017170Watermelon (97103) v2cmowmbB773
CmoCh04G017170Watermelon (97103) v2cmowmbB734
CmoCh04G017170Watermelon (97103) v2cmowmbB746
CmoCh04G017170Wax gourdcmowgoB0841
CmoCh04G017170Wax gourdcmowgoB0886
CmoCh04G017170Wax gourdcmowgoB0903
CmoCh04G017170Wax gourdcmowgoB0917
CmoCh04G017170Cucurbita moschata (Rifu)cmocmoB124
CmoCh04G017170Cucurbita moschata (Rifu)cmocmoB268
CmoCh04G017170Cucurbita moschata (Rifu)cmocmoB340
CmoCh04G017170Cucurbita moschata (Rifu)cmocmoB365
CmoCh04G017170Cucumber (Gy14) v1cgycmoB0443
CmoCh04G017170Cucumber (Gy14) v1cgycmoB0591
CmoCh04G017170Cucumber (Gy14) v1cgycmoB0797
CmoCh04G017170Cucurbita maxima (Rimu)cmacmoB314
CmoCh04G017170Cucurbita maxima (Rimu)cmacmoB423
CmoCh04G017170Cucurbita maxima (Rimu)cmacmoB728