CmoCh04G017170 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGATATCATGGAAGATAGAGGCACCTCCTTCTCATTTGATTGAACTTGTTTCATGTTTCTCATCTAACTTTCACGTGGTTGAATTTTCATCTTTTGTATCCTTCTTTAACGGTCCTTTTTCATTTTTCTGCATTGGCCATATGCATTTTTAACAATTGAAGCTAAGATTGTTGTCTTGGTCTATTTTCAGCCGGTGAGGATGTCGACTCCTGCAAGGAAGAGACTGATGAGAGACTTCAGGAGATTGCAGCAAGATCCACCTGCTGGCATCAGTGGTGCGCCACAAGACAATAATATCATGCTATGGAATGCTGTCATATTTGGGTCAGCTGGGAAAATAAATAATGACCTTGTTCTTTCTTCTTATCAGAATTTGTGCAGGGCAATTGCTTCTTTGACTACTGATGCTTTGGTCTTTGACTGTTTTTTTTGTTGGCTTTTGCAGGCCAGATGATACGCCTTGGGATGGAGGTATTCTTACTTTCTGTCTTTCTTGGCCTATTTTTCTTCTTTAGAATAAACAGCGTTGTATTAGGATCAAGTTCTATAGTAATTTACTCATTTCTTCTTTGATGGTTTCACTTTGTTTTTCTGTCCAAAACTATAACTAATGAGGATCTTTTTTCACTGCAGCTATGTAGATATGTATGTTGGCTTTATATCTAATAGCTTTGTACAGTTAAATTGATTTGTCAATTTTAAAATTATCCGGTCCTGATTTGCATGATATTTTGTTTGTATTACATGTTCTTCTCTTTAAGCTTTTTACCGTTTGGATATGGATGTGTGTTGTATTTTCTGGTGGAGAACTCAAAGAATAATTAGAACTTTCTAAATGTCTGGTTGTGATTTCCTGGTTCTTTAAATTCAAAATGTTAAGTTGCTTTCATCCTTCCTGGTGCGAGTTATGGGACTGTATTCTGGAGGATCTGTGTATTCTGATGTCCTTTTCTAAACACTGAAATGGACATTAGCATCTTGTTTACTTTTCTGAGAATTTTGATTAATTTTGCATCTTATTTTGGTATTTTTCCACAAGTATTTTTTTTATGAACTCCTCATGTAGTTTATGAATTGTAATTTGGCTACCCTTTTTTTGAGTGTTGACCAGGTACGTTTAAGCTGACCCTTCAGTTCACGGAGGATTATCCAAATAAGCCACCAACAGTTCGCTTTGTGTCTAGAATGTTCCACCCTAATAGTAAGTTCACAATATCAAAGAATGTGCCCTTTACAAACAAGTTATGCTTTATGTGGTTCATTCTGGGTCAATTTGAGAGCTTATTATAGTCTCCATTGGCACTGGGTTAAGAAGATACCTAATTCTCCTGTAGATTCTTTCTCCAGCTACTTATTGTTAAGAGCGTGTTGCTTACTATGTTTATATGCTGTGCTTACCCAATTTCATTGTATATTTTTCATATTGTGCATAGGTTATTTTCTTTGTCTTACAAATAAAAAGCAGTCTATTGTGTTTCCATCATCAAACTTTTATATGAACTCGATGTGTTATGTTTGATATATATGGGTATGTTTGACTTGGGCCTGGATGATTTTAATGATTGGAAGGCAAGAGAGAGAAAGTATAACTATCTGGTAAAAAGACAAAGTAAATGTTTATCTTAGGGTACATTGTAAATTATGACAATTTTATTCTTAATTTGTTCTGTACATGTTTCTAAGCTTACACTTTGTTTGTGCGTTTGCCTTTTCCATTGCCTTCAGTTTATGCTGATGGAAGCATATGTTTGGACATTCTGCAAAATCAATGGAGCCCAATCTATGATGTAGCAGCTATACTCACCTCTATTCAGGTATTCCTAATTGATTTAACCTTAATAAATGTCAAGCGTATTTTTAATTTATGTATGATTAATAGCTCTTTTTATCACAAATGAAAAGCATGCCACTGCTCCTGTACTATGCCCTATCCTAGAAGTAGCACGCATATGGTTCATGTGTCCTCATGATGCTCATTGTAACTTATTTATGGAACTGGCTGTGCGCGCAAGAATTTACTTAGTACAGTTGCCCTTGCCACTGACCAGCCATGCCATAAAAGCACTCATTCCTTTAGTTTTTGTTCTTATTTTCTGAATTTGTGGCATATGACAGTTTAGATTCTTTTGATTTATTGATTTAGTTTATTATTTGACATTTAGGATCAAGTATAAAGAACAGGCCTCAAAAAAAGTATAAGAACTGGAATTATCTTGCCTGATTATCTGATTGGAATTTGAGACCTACTTAAGAAATTGTATCTATTGTCCATATTCTATATTTTTTATGATACCATTAAAATATCCAACACTGCAAGTATACTACTGCCCTCCTAGAAAAGGGAGAAAGGAACGTAGGTTTGTGAGATGAAGAATTATCTGCCGATTTATTTGGTGTGGGGATTGAGTATGTGATAATATTGTTGTCAGTATTGGAAAAATGACTTGTGGAATTTAGTGTTAAATGGCTCGGCGGTGCTTTTCATTGACTTGCAAGCTCAATGTTCGTTCGTTCGTTTGTTTATTTTTAATCCCAATAACATTTTCCGTTGTAGTCGTTGCTGTGCGACCCCAATCCAAACTCACCTGCTAATTCTGAAGCTGCTCGGATGTTTAGCGAGAACAAGCGTGATTACAATAGGAGAGTACGTGAGATCGTGGAACAGAGTTGGACTGCTGATTAG ATGGTGATATCATGGAAGATAGAGGCACCTCCTTCTCATTTGATTGAACTTGTTTCATGTTTCTCATCTAACTTTCACGTGCCGGTGAGGATGTCGACTCCTGCAAGGAAGAGACTGATGAGAGACTTCAGGAGATTGCAGCAAGATCCACCTGCTGGCATCAGTGGTGCGCCACAAGACAATAATATCATGCTATGGAATGCTGTCATATTTGGGCCAGATGATACGCCTTGGGATGGAGGTACGTTTAAGCTGACCCTTCAGTTCACGGAGGATTATCCAAATAAGCCACCAACAGTTCGCTTTGTGTCTAGAATGTTCCACCCTAATATTTATGCTGATGGAAGCATATGTTTGGACATTCTGCAAAATCAATGGAGCCCAATCTATGATGTAGCAGCTATACTCACCTCTATTCAGTCGTTGCTGTGCGACCCCAATCCAAACTCACCTGCTAATTCTGAAGCTGCTCGGATGTTTAGCGAGAACAAGCGTGATTACAATAGGAGAGTACGTGAGATCGTGGAACAGAGTTGGACTGCTGATTAG ATGGTGATATCATGGAAGATAGAGGCACCTCCTTCTCATTTGATTGAACTTGTTTCATGTTTCTCATCTAACTTTCACGTGCCGGTGAGGATGTCGACTCCTGCAAGGAAGAGACTGATGAGAGACTTCAGGAGATTGCAGCAAGATCCACCTGCTGGCATCAGTGGTGCGCCACAAGACAATAATATCATGCTATGGAATGCTGTCATATTTGGGCCAGATGATACGCCTTGGGATGGAGGTACGTTTAAGCTGACCCTTCAGTTCACGGAGGATTATCCAAATAAGCCACCAACAGTTCGCTTTGTGTCTAGAATGTTCCACCCTAATATTTATGCTGATGGAAGCATATGTTTGGACATTCTGCAAAATCAATGGAGCCCAATCTATGATGTAGCAGCTATACTCACCTCTATTCAGTCGTTGCTGTGCGACCCCAATCCAAACTCACCTGCTAATTCTGAAGCTGCTCGGATGTTTAGCGAGAACAAGCGTGATTACAATAGGAGAGTACGTGAGATCGTGGAACAGAGTTGGACTGCTGATTAG
BLAST of CmoCh04G017170 vs. Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 1.9e-84 Identity = 146/152 (96.05%), Postives = 151/152 (99.34%), Query Frame = 1
BLAST of CmoCh04G017170 vs. Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 1.9e-84 Identity = 146/152 (96.05%), Postives = 152/152 (100.00%), Query Frame = 1
BLAST of CmoCh04G017170 vs. Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 5.6e-84 Identity = 145/152 (95.39%), Postives = 150/152 (98.68%), Query Frame = 1
BLAST of CmoCh04G017170 vs. Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 9.6e-84 Identity = 144/152 (94.74%), Postives = 152/152 (100.00%), Query Frame = 1
BLAST of CmoCh04G017170 vs. Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 4.8e-75 Identity = 130/149 (87.25%), Postives = 143/149 (95.97%), Query Frame = 1
BLAST of CmoCh04G017170 vs. TrEMBL
Match: A0A0A0KQJ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604380 PE=3 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 7.1e-86 Identity = 153/155 (98.71%), Postives = 155/155 (100.00%), Query Frame = 1
BLAST of CmoCh04G017170 vs. TrEMBL
Match: D7TND2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01770 PE=3 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 4.6e-85 Identity = 152/154 (98.70%), Postives = 154/154 (100.00%), Query Frame = 1
BLAST of CmoCh04G017170 vs. TrEMBL
Match: M0ZLF5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001314 PE=3 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 6.1e-85 Identity = 153/176 (86.93%), Postives = 164/176 (93.18%), Query Frame = 1
BLAST of CmoCh04G017170 vs. TrEMBL
Match: A0A072TRF9_MEDTR (Ubiquitin-conjugating enzyme OS=Medicago truncatula GN=MTR_8g468530 PE=3 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 1.0e-84 Identity = 152/162 (93.83%), Postives = 156/162 (96.30%), Query Frame = 1
BLAST of CmoCh04G017170 vs. TrEMBL
Match: A0A061FY21_THECC (Ubiquiting-conjugating enzyme 2 OS=Theobroma cacao GN=TCM_011789 PE=3 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 5.1e-84 Identity = 150/152 (98.68%), Postives = 152/152 (100.00%), Query Frame = 1
BLAST of CmoCh04G017170 vs. TAIR10
Match: AT2G02760.1 (AT2G02760.1 ubiquiting-conjugating enzyme 2) HSP 1 Score: 313.2 bits (801), Expect = 1.1e-85 Identity = 146/152 (96.05%), Postives = 152/152 (100.00%), Query Frame = 1
BLAST of CmoCh04G017170 vs. TAIR10
Match: AT1G14400.1 (AT1G14400.1 ubiquitin carrier protein 1) HSP 1 Score: 310.8 bits (795), Expect = 5.4e-85 Identity = 144/152 (94.74%), Postives = 152/152 (100.00%), Query Frame = 1
BLAST of CmoCh04G017170 vs. TAIR10
Match: AT5G62540.1 (AT5G62540.1 ubiquitin-conjugating enzyme 3) HSP 1 Score: 282.0 bits (720), Expect = 2.7e-76 Identity = 130/149 (87.25%), Postives = 143/149 (95.97%), Query Frame = 1
BLAST of CmoCh04G017170 vs. TAIR10
Match: AT4G27960.2 (AT4G27960.2 ubiquitin conjugating enzyme 9) HSP 1 Score: 144.8 bits (364), Expect = 5.1e-35 Identity = 68/161 (42.24%), Postives = 98/161 (60.87%), Query Frame = 1
BLAST of CmoCh04G017170 vs. TAIR10
Match: AT5G53300.1 (AT5G53300.1 ubiquitin-conjugating enzyme 10) HSP 1 Score: 142.9 bits (359), Expect = 1.9e-34 Identity = 66/146 (45.21%), Postives = 92/146 (63.01%), Query Frame = 1
BLAST of CmoCh04G017170 vs. NCBI nr
Match: gi|700196716|gb|KGN51893.1| (hypothetical protein Csa_5G604380 [Cucumis sativus]) HSP 1 Score: 324.7 bits (831), Expect = 1.0e-85 Identity = 153/155 (98.71%), Postives = 155/155 (100.00%), Query Frame = 1
BLAST of CmoCh04G017170 vs. NCBI nr
Match: gi|296086416|emb|CBI32005.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 322.0 bits (824), Expect = 6.6e-85 Identity = 152/154 (98.70%), Postives = 154/154 (100.00%), Query Frame = 1
BLAST of CmoCh04G017170 vs. NCBI nr
Match: gi|922335550|ref|XP_013445765.1| (ubiquitin-conjugating enzyme [Medicago truncatula]) HSP 1 Score: 320.9 bits (821), Expect = 1.5e-84 Identity = 152/162 (93.83%), Postives = 156/162 (96.30%), Query Frame = 1
BLAST of CmoCh04G017170 vs. NCBI nr
Match: gi|645229882|ref|XP_008221668.1| (PREDICTED: ubiquitin-conjugating enzyme E2 2-like [Prunus mume]) HSP 1 Score: 320.9 bits (821), Expect = 1.5e-84 Identity = 151/154 (98.05%), Postives = 154/154 (100.00%), Query Frame = 1
BLAST of CmoCh04G017170 vs. NCBI nr
Match: gi|659091014|ref|XP_008446323.1| (PREDICTED: ubiquitin-conjugating enzyme E2 2-like [Cucumis melo]) HSP 1 Score: 319.7 bits (818), Expect = 3.3e-84 Identity = 151/152 (99.34%), Postives = 152/152 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |