CmoCh04G015320 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G015320
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Heavy metal transport/detoxification superfamily protein
Location	Cmo_Chr04 : 7844135 .. 7844917 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCATTCTTGACTCTGTCTCAGACTTAATCTCTGATTTTGTGACCATTTCCAGACAAAGGAACAAAAAACCATTGCAGGTTCCCTCCATTTATCTCTTTTTCTTTCAAAATCATCCACTTTTACTCTCTGATTTATAGTCTTAATCAGATTAAGCTTTAAACTCACTCTTTAATGGCGGGTTTTGTTTTTGATGAGTGTAGACAGTGGAGATCAAGGTCAAAATGGACTGCGACGGCTGCGAGCGCCGAGTAAGAAACGCCGTCTCCAAAATGAAAGGTCCGACAAACCCATTTTGATTTTGGAATCCACCATTGAAGAAGAAAAGGAGAGAATAATAATTTCATGTTCTAAGATTAATTTGTGGAATACAGGCGTGAAGACGGTGGAAATAAACAGAAAACAGGGCAAAGTTACAGTGATGGGGTTCGTGGATGAGAACAGAGTGTTGAAGAAAGTGAGAAGAACGGGGAAAATGGCGGAGCTATGGCCGTATGTGCCGTACAATGTGGTGGCGTATCCCTACGTGGCGCAGGCCTACGACAAAAGGGCGCCGGCGGGCTTCGTTAAAAACGCCGTTCAGGCAGTCCCAAGCCCTAATGCCGTCGACGAGAAGCTCACCACCATGTTTAGCGATGACAATCCTAACGGCTGCTTCGTTATGTAATTCAAACCATTATCCAACCTATTTCTTTTTTTTTTTTACTTTTTACTTCGCTGTAGAAGTTAATTTTTACTCCAATACTTTTTACCCATACTTCATTTCATATTTATTTATTATA

mRNA sequence

ATGGGCATTCTTGACTCTGTCTCAGACTTAATCTCTGATTTTGTGACCATTTCCAGACAAAGGAACAAAAAACCATTGCAGACAGTGGAGATCAAGGTCAAAATGGACTGCGACGGCTGCGAGCGCCGAGTAAGAAACGCCGTCTCCAAAATGAAAGGCGTGAAGACGGTGGAAATAAACAGAAAACAGGGCAAAGTTACAGTGATGGGGTTCGTGGATGAGAACAGAGTGTTGAAGAAAGTGAGAAGAACGGGGAAAATGGCGGAGCTATGGCCGTATGTGCCGTACAATGTGGTGGCGTATCCCTACGTGGCGCAGGCCTACGACAAAAGGGCGCCGGCGGGCTTCGTTAAAAACGCCGTTCAGGCAGTCCCAAGCCCTAATGCCGTCGACGAGAAGCTCACCACCATGTTTAGCGATGACAATCCTAACGGCTGCTTCGTTATGTAATTCAAACCATTATCCAACCTATTTCTTTTTTTTTTTTACTTTTTACTTCGCTGTAGAAGTTAATTTTTACTCCAATACTTTTTACCCATACTTCATTTCATATTTATTTATTATA

Coding sequence (CDS)

ATGGGCATTCTTGACTCTGTCTCAGACTTAATCTCTGATTTTGTGACCATTTCCAGACAAAGGAACAAAAAACCATTGCAGACAGTGGAGATCAAGGTCAAAATGGACTGCGACGGCTGCGAGCGCCGAGTAAGAAACGCCGTCTCCAAAATGAAAGGCGTGAAGACGGTGGAAATAAACAGAAAACAGGGCAAAGTTACAGTGATGGGGTTCGTGGATGAGAACAGAGTGTTGAAGAAAGTGAGAAGAACGGGGAAAATGGCGGAGCTATGGCCGTATGTGCCGTACAATGTGGTGGCGTATCCCTACGTGGCGCAGGCCTACGACAAAAGGGCGCCGGCGGGCTTCGTTAAAAACGCCGTTCAGGCAGTCCCAAGCCCTAATGCCGTCGACGAGAAGCTCACCACCATGTTTAGCGATGACAATCCTAACGGCTGCTTCGTTATGTAA

Homology

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BLAST of CmoCh04G015320 vs. Swiss-Prot
Match: HIP20_ARATH (Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana GN=HIPP20 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.7e-46
Identity = 91/152 (59.87%), Postives = 117/152 (76.97%), Query Frame = 1


Query: 1   MGILDSVSDLISDFVTISRQRNK-KPLQTVEIKVKMDCDGCERRVRNAVSKMKGVKTVEI 60
           MG LDS+S+ ISD+  ++R+R K K +QTV IKVKMDCDGCERRV+NAVS MKGVK+VE+
Sbjct: 1   MGALDSLSEYISDYFRVTRKRRKRKVMQTVNIKVKMDCDGCERRVKNAVSSMKGVKSVEV 60

Query: 61  NRKQGKVTVMGFVDENRVLKKVRRTGKMAELWPYVPYNVVAYPYVAQAYDKRAPAGFVKN 120
           NRK  KVTV G+V+  +VLK++ RTGK AE+WPYVPYN+VAYPY    YDK+APAG+V+ 
Sbjct: 61  NRKIHKVTVSGYVEPKKVLKRIERTGKKAEIWPYVPYNMVAYPYAVGTYDKKAPAGYVRK 120

Query: 121 AVQAVPS--PNAVDEKLTTMFSDDNPNGCFVM 150
           + Q+     P A +    ++FSD+NPN C VM
Sbjct: 121 SEQSQLQLLPGAPENHYISLFSDENPNACTVM 152

[Close]

BLAST of CmoCh04G015320 vs. Swiss-Prot
Match: HIP22_ARATH (Heavy metal-associated isoprenylated plant protein 22 OS=Arabidopsis thaliana GN=HIPP22 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.5e-45
Identity = 88/152 (57.89%), Postives = 117/152 (76.97%), Query Frame = 1


Query: 1   MGILDSVSDLISD--FVTISRQRNKKPLQTVEIKVKMDCDGCERRVRNAVSKMKGVKTVE 60
           MG L+ +S+  S+  +V+I +++ +K +QTV IKVK+DCDGCER+++NAVS +KG K+VE
Sbjct: 1   MGALNYLSEYFSNHFYVSIRKRKKRKVMQTVNIKVKIDCDGCERKIKNAVSSIKGAKSVE 60

Query: 61  INRKQGKVTVMGFVDENRVLKKVRRTG-KMAELWPYVPYNVVAYPYVAQAYDKRAPAGFV 120
           +NRK  KVTV G+VD  +VLK V+ TG K AELWPYVPY +VAYPY A AYDKRAP GFV
Sbjct: 61  VNRKMHKVTVSGYVDPKKVLKTVQSTGKKKAELWPYVPYTMVAYPYAAGAYDKRAPPGFV 120

Query: 121 KNAVQAVPSPNAVDEKLTTMFSDDNPNGCFVM 150
           + + QA   P + D+KL ++FSD+NPN C VM
Sbjct: 121 RKSEQAQAQPGSTDDKLMSLFSDENPNACTVM 152

[Close]

BLAST of CmoCh04G015320 vs. Swiss-Prot
Match: HIP21_ARATH (Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana GN=HIPP21 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 5.7e-42
Identity = 82/150 (54.67%), Postives = 109/150 (72.67%), Query Frame = 1


Query: 1   MGILDSVSDLISDFVTISRQRNKKPLQTVEIKVKMDCDGCERRVRNAVSKMKGVKTVEIN 60
           MG  D +S   S +   + +  +KPLQTV+IKVKMDCDGCERRVRN V +MKGVK+VE+N
Sbjct: 1   MGAFDYISSFCS-YTYANAKTKRKPLQTVDIKVKMDCDGCERRVRNVVRRMKGVKSVEVN 60

Query: 61  RKQGKVTVMGFVDENRVLKKVRRTGKMAELWPYVPYNVVAYPYVAQAYDKRAPAGFVKNA 120
           RKQ ++TV G VD N+VLK+V+ TGK AE WPY+P ++V YP+    YDKRAPAG ++N 
Sbjct: 61  RKQSRITVNGHVDPNKVLKRVKSTGKKAEFWPYIPQHMVYYPFAPGMYDKRAPAGHIRNP 120

Query: 121 VQAVPSPNAVDEKLTTMFSDDNPN-GCFVM 150
            Q+ P+ NA +E   ++FSDDN +  C +M
Sbjct: 121 TQSFPTANAPEENYVSLFSDDNVHAACSIM 149

[Close]

BLAST of CmoCh04G015320 vs. Swiss-Prot
Match: HIP26_ARATH (Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 8.0e-36
Identity = 78/154 (50.65%), Postives = 107/154 (69.48%), Query Frame = 1


Query: 1   MGILDSVSDLISDFVTISRQRNKKPLQTVEIKVKMDCDGCERRVRNAVSKMKGVKTVEIN 60
           MG+LD VS++  D     + + +K LQTVEIKVKMDC+GCER+VR +V  MKGV +V + 
Sbjct: 1   MGVLDHVSEMF-DCSHGHKIKKRKQLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLE 60

Query: 61  RKQGKVTVMGFVDENRVLKKV-RRTGKMAELWPYVPYNVVAYPYVAQAYDKRAPAGFVKN 120
            K  KVTV+G+VD N+V+ ++  RTGK  ELWPYVPY+VVA+PY A  YDK+AP+G+V+ 
Sbjct: 61  PKAHKVTVVGYVDPNKVVARMSHRTGKKVELWPYVPYDVVAHPYAAGVYDKKAPSGYVRR 120

Query: 121 ----AVQAVPSPNAVDEKLTTMFSDDNPNGCFVM 150
                V  +   ++ + + TT FSD+NP  C VM
Sbjct: 121 VDDPGVSQLARASSTEVRYTTAFSDENPAACVVM 153

[Close]

BLAST of CmoCh04G015320 vs. Swiss-Prot
Match: HIP27_ARATH (Heavy metal-associated isoprenylated plant protein 27 OS=Arabidopsis thaliana GN=HIPP27 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-33
Identity = 73/132 (55.30%), Postives = 92/132 (69.70%), Query Frame = 1


Query: 24  KPLQTVEIKVKMDCDGCERRVRNAVSKMKGVKTVEINRKQGKVTVMGFVDENRVLKKV-R 83
           K  Q VEIKVKMDC+GCERRVR +V  MKGV  V ++ KQ K+TV GFV  ++V+ +V  
Sbjct: 16  KQFQKVEIKVKMDCEGCERRVRKSVEGMKGVSKVTVDPKQSKLTVEGFVQPSKVVHRVMH 75

Query: 84  RTGKMAELWPYVPYNVVAYPYVAQAYDKRAPAGFVKNA-----VQAVPSPNAVDEKLTTM 143
           RTGK AELWPYVPY VV +PY   AYDK+AP G+V+NA     V  +   ++ + K T+ 
Sbjct: 76  RTGKKAELWPYVPYEVVPHPYAPGAYDKKAPPGYVRNALADPLVAPLARASSFEVKYTSA 135

Query: 144 FSDDNPNGCFVM 150
           FSDDNPN C +M
Sbjct: 136 FSDDNPNACTIM 147

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BLAST of CmoCh04G015320 vs. TrEMBL
Match: A0A0A0KTB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611750 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.3e-69
Identity = 132/149 (88.59%), Postives = 138/149 (92.62%), Query Frame = 1


Query: 1   MGILDSVSDLISDFVTISRQRNKKPLQTVEIKVKMDCDGCERRVRNAVSKMKGVKTVEIN 60
           MGI DSVSDLISD+V  SRQR KKPLQTVEIKVKMDCDGCERRV+NAV+KMKG KTVE+N
Sbjct: 1   MGIFDSVSDLISDYVATSRQRKKKPLQTVEIKVKMDCDGCERRVKNAVTKMKGAKTVEVN 60

Query: 61  RKQGKVTVMGFVDENRVLKKVRRTGKMAELWPYVPYNVVAYPYVAQAYDKRAPAGFVKNA 120
           RKQ KVTV GFV+ NRVLKKVRRTGK AELWPYVPYNVVAYPYV QAYDKRAPAGFVKNA
Sbjct: 61  RKQSKVTVTGFVEANRVLKKVRRTGKRAELWPYVPYNVVAYPYVTQAYDKRAPAGFVKNA 120

Query: 121 VQAVPSPNAVDEKLTTMFSDDNPNGCFVM 150
           VQA+PSPNAVDEKLTTMFSDDNPNGC VM
Sbjct: 121 VQAIPSPNAVDEKLTTMFSDDNPNGCSVM 149

[Close]

BLAST of CmoCh04G015320 vs. TrEMBL
Match: A0A067L0K9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04678 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 7.5e-57
Identity = 106/150 (70.67%), Postives = 133/150 (88.67%), Query Frame = 1


Query: 1   MGILDSVSDLISDFVTI-SRQRNKKPLQTVEIKVKMDCDGCERRVRNAVSKMKGVKTVEI 60
           MG LDS+SD +SD  TI S++R +KP+QTV+IKVKMDCDGCERRVRN+VS MKGVK+VE+
Sbjct: 1   MGALDSLSDYLSDLFTITSKKRKRKPMQTVDIKVKMDCDGCERRVRNSVSHMKGVKSVEV 60

Query: 61  NRKQGKVTVMGFVDENRVLKKVRRTGKMAELWPYVPYNVVAYPYVAQAYDKRAPAGFVKN 120
           NRKQ +VTV G+V+ ++VLKKV+ TGK AE WPYVPYN+VAYPYVAQAYDK+AP+G+VKN
Sbjct: 61  NRKQSRVTVSGYVEPSKVLKKVKSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVKN 120

Query: 121 AVQAVPSPNAVDEKLTTMFSDDNPNGCFVM 150
            VQA+PSPNA DE+LT++FSD+NP+ C +M
Sbjct: 121 VVQALPSPNATDERLTSLFSDENPHACSIM 150

[Close]

BLAST of CmoCh04G015320 vs. TrEMBL
Match: A0A061E8C9_THECC (Heavy metal transport/detoxification superfamily protein OS=Theobroma cacao GN=TCM_010826 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.3e-56
Identity = 108/150 (72.00%), Postives = 128/150 (85.33%), Query Frame = 1


Query: 1   MGILDSVSDLISDFVTISRQRNK-KPLQTVEIKVKMDCDGCERRVRNAVSKMKGVKTVEI 60
           MG LDS+SD ISD +T+  +R K K +QTVEIKVKMDCDGCERRV+NAVS MKG K+V +
Sbjct: 1   MGALDSLSDYISDLITVHTKRKKRKVMQTVEIKVKMDCDGCERRVKNAVSSMKGAKSVNV 60

Query: 61  NRKQGKVTVMGFVDENRVLKKVRRTGKMAELWPYVPYNVVAYPYVAQAYDKRAPAGFVKN 120
           NRKQ +VTV G+V+ N+VLKKV+ TGK AE WPYVPYN+VAYPYVAQAYDK+AP+G+VKN
Sbjct: 61  NRKQSRVTVTGYVEPNKVLKKVKSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVKN 120

Query: 121 AVQAVPSPNAVDEKLTTMFSDDNPNGCFVM 150
           AVQA+PSPNA DEK  T+FSD+NPN C VM
Sbjct: 121 AVQALPSPNAADEKFITLFSDENPNACSVM 150

[Close]

BLAST of CmoCh04G015320 vs. TrEMBL
Match: B9HW84_POPTR (Heavy-metal-associated domain-containing family protein OS=Populus trichocarpa GN=POPTR_0010s12480g PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.8e-56
Identity = 105/150 (70.00%), Postives = 129/150 (86.00%), Query Frame = 1


Query: 1   MGILDSVSDLISDFVTISRQRNK-KPLQTVEIKVKMDCDGCERRVRNAVSKMKGVKTVEI 60
           MG LD +SD +SD  T++R++ K KP+QTV+IKVKMDCDGCERRV+N+VS MKGVK+VE+
Sbjct: 1   MGALDDLSDYLSDLFTVARKKRKRKPMQTVDIKVKMDCDGCERRVKNSVSSMKGVKSVEV 60

Query: 61  NRKQGKVTVMGFVDENRVLKKVRRTGKMAELWPYVPYNVVAYPYVAQAYDKRAPAGFVKN 120
           NRKQ +VTV G V+ N+VLKKV+ TGK AE WPYVPYN+VAYPY AQAYDK+APAG+VKN
Sbjct: 61  NRKQSRVTVSGNVEPNKVLKKVKSTGKRAEFWPYVPYNLVAYPYAAQAYDKKAPAGYVKN 120

Query: 121 AVQAVPSPNAVDEKLTTMFSDDNPNGCFVM 150
            VQA+PSPNA DE+ T+MFSD+NPN C +M
Sbjct: 121 VVQALPSPNATDERFTSMFSDENPNACSIM 150

[Close]

BLAST of CmoCh04G015320 vs. TrEMBL
Match: A0A0D2U4G1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G166300 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.1e-55
Identity = 107/150 (71.33%), Postives = 127/150 (84.67%), Query Frame = 1


Query: 1   MGILDSVSDLISDFVTISRQRNK-KPLQTVEIKVKMDCDGCERRVRNAVSKMKGVKTVEI 60
           MG LDS+SD ISD VT+  +R K K +QTVEIKVKMDCDGCERRV+NAVS MKGVK+VE+
Sbjct: 1   MGALDSLSDYISDLVTVHGKRKKRKVMQTVEIKVKMDCDGCERRVKNAVSSMKGVKSVEV 60

Query: 61  NRKQGKVTVMGFVDENRVLKKVRRTGKMAELWPYVPYNVVAYPYVAQAYDKRAPAGFVKN 120
           NRK+  V+V G+V+ N+VL KV+ TGK AE WPYVPYN+VAYPYVAQAYDK+AP+G+VK 
Sbjct: 61  NRKKSYVSVSGYVEPNKVLNKVKSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVKE 120

Query: 121 AVQAVPSPNAVDEKLTTMFSDDNPNGCFVM 150
           AVQA+PSPNAVDEK  T FSD+NPN C +M
Sbjct: 121 AVQALPSPNAVDEKFVTFFSDENPNACSIM 150

[Close]

BLAST of CmoCh04G015320 vs. TAIR10
Match: AT1G71050.1 (AT1G71050.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 186.8 bits (473), Expect = 9.6e-48
Identity = 91/152 (59.87%), Postives = 117/152 (76.97%), Query Frame = 1


Query: 1   MGILDSVSDLISDFVTISRQRNK-KPLQTVEIKVKMDCDGCERRVRNAVSKMKGVKTVEI 60
           MG LDS+S+ ISD+  ++R+R K K +QTV IKVKMDCDGCERRV+NAVS MKGVK+VE+
Sbjct: 1   MGALDSLSEYISDYFRVTRKRRKRKVMQTVNIKVKMDCDGCERRVKNAVSSMKGVKSVEV 60

Query: 61  NRKQGKVTVMGFVDENRVLKKVRRTGKMAELWPYVPYNVVAYPYVAQAYDKRAPAGFVKN 120
           NRK  KVTV G+V+  +VLK++ RTGK AE+WPYVPYN+VAYPY    YDK+APAG+V+ 
Sbjct: 61  NRKIHKVTVSGYVEPKKVLKRIERTGKKAEIWPYVPYNMVAYPYAVGTYDKKAPAGYVRK 120

Query: 121 AVQAVPS--PNAVDEKLTTMFSDDNPNGCFVM 150
           + Q+     P A +    ++FSD+NPN C VM
Sbjct: 121 SEQSQLQLLPGAPENHYISLFSDENPNACTVM 152

[Close]

BLAST of CmoCh04G015320 vs. TAIR10
Match: AT1G22990.1 (AT1G22990.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 181.8 bits (460), Expect = 3.1e-46
Identity = 88/152 (57.89%), Postives = 117/152 (76.97%), Query Frame = 1


Query: 1   MGILDSVSDLISD--FVTISRQRNKKPLQTVEIKVKMDCDGCERRVRNAVSKMKGVKTVE 60
           MG L+ +S+  S+  +V+I +++ +K +QTV IKVK+DCDGCER+++NAVS +KG K+VE
Sbjct: 1   MGALNYLSEYFSNHFYVSIRKRKKRKVMQTVNIKVKIDCDGCERKIKNAVSSIKGAKSVE 60

Query: 61  INRKQGKVTVMGFVDENRVLKKVRRTG-KMAELWPYVPYNVVAYPYVAQAYDKRAPAGFV 120
           +NRK  KVTV G+VD  +VLK V+ TG K AELWPYVPY +VAYPY A AYDKRAP GFV
Sbjct: 61  VNRKMHKVTVSGYVDPKKVLKTVQSTGKKKAELWPYVPYTMVAYPYAAGAYDKRAPPGFV 120

Query: 121 KNAVQAVPSPNAVDEKLTTMFSDDNPNGCFVM 150
           + + QA   P + D+KL ++FSD+NPN C VM
Sbjct: 121 RKSEQAQAQPGSTDDKLMSLFSDENPNACTVM 152

[Close]

BLAST of CmoCh04G015320 vs. TAIR10
Match: AT5G17450.1 (AT5G17450.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 171.8 bits (434), Expect = 3.2e-43
Identity = 82/150 (54.67%), Postives = 109/150 (72.67%), Query Frame = 1


Query: 1   MGILDSVSDLISDFVTISRQRNKKPLQTVEIKVKMDCDGCERRVRNAVSKMKGVKTVEIN 60
           MG  D +S   S +   + +  +KPLQTV+IKVKMDCDGCERRVRN V +MKGVK+VE+N
Sbjct: 1   MGAFDYISSFCS-YTYANAKTKRKPLQTVDIKVKMDCDGCERRVRNVVRRMKGVKSVEVN 60

Query: 61  RKQGKVTVMGFVDENRVLKKVRRTGKMAELWPYVPYNVVAYPYVAQAYDKRAPAGFVKNA 120
           RKQ ++TV G VD N+VLK+V+ TGK AE WPY+P ++V YP+    YDKRAPAG ++N 
Sbjct: 61  RKQSRITVNGHVDPNKVLKRVKSTGKKAEFWPYIPQHMVYYPFAPGMYDKRAPAGHIRNP 120

Query: 121 VQAVPSPNAVDEKLTTMFSDDNPN-GCFVM 150
            Q+ P+ NA +E   ++FSDDN +  C +M
Sbjct: 121 TQSFPTANAPEENYVSLFSDDNVHAACSIM 149

[Close]

BLAST of CmoCh04G015320 vs. TAIR10
Match: AT4G39700.1 (AT4G39700.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 166.8 bits (421), Expect = 1.0e-41
Identity = 81/154 (52.60%), Postives = 112/154 (72.73%), Query Frame = 1


Query: 2   GILDSVSDLISDFVTIS--RQRNKKPLQTVEIKVKMDCDGCERRVRNAVSKMKGVKTVEI 61
           G L+ +S+LI +  + S  +++ KK  QTVE+KV+MDCDGC  +++N++S +KGVKTVEI
Sbjct: 5   GTLEYISELIGNGGSHSYGKRKKKKQFQTVELKVRMDCDGCVLKIKNSLSSLKGVKTVEI 64

Query: 62  NRKQGKVTVMGFVDENRVLKKVRRTGKMAELWPYVPYNVVAYPYVAQAYDKRAPAGFVK- 121
           N+KQ KVTV G+ D ++VLKK + TGK AE+WPYVPYN+VA PY+AQAYDK+AP G+V+ 
Sbjct: 65  NKKQQKVTVSGYADASKVLKKAKATGKKAEIWPYVPYNLVAQPYIAQAYDKKAPPGYVRK 124

Query: 122 ---NAVQAVPSPNAVDEKLTTMFSDDNPNGCFVM 150
              N      +    D   T++FSDDNPN C +M
Sbjct: 125 VDPNVTTGTMAVYYDDPSYTSLFSDDNPNACSIM 158

[Close]

BLAST of CmoCh04G015320 vs. TAIR10
Match: AT4G38580.1 (AT4G38580.1 farnesylated protein 6)

HSP 1 Score: 151.4 bits (381), Expect = 4.5e-37
Identity = 78/154 (50.65%), Postives = 107/154 (69.48%), Query Frame = 1


Query: 1   MGILDSVSDLISDFVTISRQRNKKPLQTVEIKVKMDCDGCERRVRNAVSKMKGVKTVEIN 60
           MG+LD VS++  D     + + +K LQTVEIKVKMDC+GCER+VR +V  MKGV +V + 
Sbjct: 1   MGVLDHVSEMF-DCSHGHKIKKRKQLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLE 60

Query: 61  RKQGKVTVMGFVDENRVLKKV-RRTGKMAELWPYVPYNVVAYPYVAQAYDKRAPAGFVKN 120
            K  KVTV+G+VD N+V+ ++  RTGK  ELWPYVPY+VVA+PY A  YDK+AP+G+V+ 
Sbjct: 61  PKAHKVTVVGYVDPNKVVARMSHRTGKKVELWPYVPYDVVAHPYAAGVYDKKAPSGYVRR 120

Query: 121 ----AVQAVPSPNAVDEKLTTMFSDDNPNGCFVM 150
                V  +   ++ + + TT FSD+NP  C VM
Sbjct: 121 VDDPGVSQLARASSTEVRYTTAFSDENPAACVVM 153

[Close]

BLAST of CmoCh04G015320 vs. NCBI nr
Match: gi|778706200|ref|XP_011655816.1| (PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Cucumis sativus])

HSP 1 Score: 270.4 bits (690), Expect = 1.9e-69
Identity = 132/149 (88.59%), Postives = 138/149 (92.62%), Query Frame = 1


Query: 1   MGILDSVSDLISDFVTISRQRNKKPLQTVEIKVKMDCDGCERRVRNAVSKMKGVKTVEIN 60
           MGI DSVSDLISD+V  SRQR KKPLQTVEIKVKMDCDGCERRV+NAV+KMKG KTVE+N
Sbjct: 1   MGIFDSVSDLISDYVATSRQRKKKPLQTVEIKVKMDCDGCERRVKNAVTKMKGAKTVEVN 60

Query: 61  RKQGKVTVMGFVDENRVLKKVRRTGKMAELWPYVPYNVVAYPYVAQAYDKRAPAGFVKNA 120
           RKQ KVTV GFV+ NRVLKKVRRTGK AELWPYVPYNVVAYPYV QAYDKRAPAGFVKNA
Sbjct: 61  RKQSKVTVTGFVEANRVLKKVRRTGKRAELWPYVPYNVVAYPYVTQAYDKRAPAGFVKNA 120

Query: 121 VQAVPSPNAVDEKLTTMFSDDNPNGCFVM 150
           VQA+PSPNAVDEKLTTMFSDDNPNGC VM
Sbjct: 121 VQAIPSPNAVDEKLTTMFSDDNPNGCSVM 149

[Close]

BLAST of CmoCh04G015320 vs. NCBI nr
Match: gi|802596337|ref|XP_012072192.1| (PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curcas])

HSP 1 Score: 228.0 bits (580), Expect = 1.1e-56
Identity = 106/150 (70.67%), Postives = 133/150 (88.67%), Query Frame = 1


Query: 1   MGILDSVSDLISDFVTI-SRQRNKKPLQTVEIKVKMDCDGCERRVRNAVSKMKGVKTVEI 60
           MG LDS+SD +SD  TI S++R +KP+QTV+IKVKMDCDGCERRVRN+VS MKGVK+VE+
Sbjct: 1   MGALDSLSDYLSDLFTITSKKRKRKPMQTVDIKVKMDCDGCERRVRNSVSHMKGVKSVEV 60

Query: 61  NRKQGKVTVMGFVDENRVLKKVRRTGKMAELWPYVPYNVVAYPYVAQAYDKRAPAGFVKN 120
           NRKQ +VTV G+V+ ++VLKKV+ TGK AE WPYVPYN+VAYPYVAQAYDK+AP+G+VKN
Sbjct: 61  NRKQSRVTVSGYVEPSKVLKKVKSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVKN 120

Query: 121 AVQAVPSPNAVDEKLTTMFSDDNPNGCFVM 150
            VQA+PSPNA DE+LT++FSD+NP+ C +M
Sbjct: 121 VVQALPSPNATDERLTSLFSDENPHACSIM 150

[Close]

BLAST of CmoCh04G015320 vs. NCBI nr
Match: gi|743889224|ref|XP_011038679.1| (PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Populus euphratica])

HSP 1 Score: 228.0 bits (580), Expect = 1.1e-56
Identity = 106/150 (70.67%), Postives = 129/150 (86.00%), Query Frame = 1


Query: 1   MGILDSVSDLISDFVTISRQRNK-KPLQTVEIKVKMDCDGCERRVRNAVSKMKGVKTVEI 60
           MG LD +SD +SD  T+SR++ K KP+QTV+IKVKMDCDGCERRV+N+VS MKGVK+VE+
Sbjct: 1   MGALDDLSDYLSDLFTVSRKKRKRKPMQTVDIKVKMDCDGCERRVKNSVSSMKGVKSVEV 60

Query: 61  NRKQGKVTVMGFVDENRVLKKVRRTGKMAELWPYVPYNVVAYPYVAQAYDKRAPAGFVKN 120
           NRKQ +VTV G V+ N+VLKKV+ TGK AE WPYVPYN+VAYPY AQAYDK+APAG+VKN
Sbjct: 61  NRKQSRVTVSGHVEPNKVLKKVKSTGKRAEFWPYVPYNLVAYPYAAQAYDKKAPAGYVKN 120

Query: 121 AVQAVPSPNAVDEKLTTMFSDDNPNGCFVM 150
            VQA+PSPNA DE+ T+MFSD+NPN C +M
Sbjct: 121 VVQALPSPNATDERFTSMFSDENPNACSIM 150

[Close]

BLAST of CmoCh04G015320 vs. NCBI nr
Match: gi|590696127|ref|XP_007045081.1| (Heavy metal transport/detoxification superfamily protein [Theobroma cacao])

HSP 1 Score: 227.3 bits (578), Expect = 1.8e-56
Identity = 108/150 (72.00%), Postives = 128/150 (85.33%), Query Frame = 1


Query: 1   MGILDSVSDLISDFVTISRQRNK-KPLQTVEIKVKMDCDGCERRVRNAVSKMKGVKTVEI 60
           MG LDS+SD ISD +T+  +R K K +QTVEIKVKMDCDGCERRV+NAVS MKG K+V +
Sbjct: 1   MGALDSLSDYISDLITVHTKRKKRKVMQTVEIKVKMDCDGCERRVKNAVSSMKGAKSVNV 60

Query: 61  NRKQGKVTVMGFVDENRVLKKVRRTGKMAELWPYVPYNVVAYPYVAQAYDKRAPAGFVKN 120
           NRKQ +VTV G+V+ N+VLKKV+ TGK AE WPYVPYN+VAYPYVAQAYDK+AP+G+VKN
Sbjct: 61  NRKQSRVTVTGYVEPNKVLKKVKSTGKRAEFWPYVPYNLVAYPYVAQAYDKKAPSGYVKN 120

Query: 121 AVQAVPSPNAVDEKLTTMFSDDNPNGCFVM 150
           AVQA+PSPNA DEK  T+FSD+NPN C VM
Sbjct: 121 AVQALPSPNAADEKFITLFSDENPNACSVM 150

[Close]

BLAST of CmoCh04G015320 vs. NCBI nr
Match: gi|224111540|ref|XP_002315894.1| (heavy-metal-associated domain-containing family protein [Populus trichocarpa])

HSP 1 Score: 226.1 bits (575), Expect = 4.1e-56
Identity = 105/150 (70.00%), Postives = 129/150 (86.00%), Query Frame = 1


Query: 1   MGILDSVSDLISDFVTISRQRNK-KPLQTVEIKVKMDCDGCERRVRNAVSKMKGVKTVEI 60
           MG LD +SD +SD  T++R++ K KP+QTV+IKVKMDCDGCERRV+N+VS MKGVK+VE+
Sbjct: 1   MGALDDLSDYLSDLFTVARKKRKRKPMQTVDIKVKMDCDGCERRVKNSVSSMKGVKSVEV 60

Query: 61  NRKQGKVTVMGFVDENRVLKKVRRTGKMAELWPYVPYNVVAYPYVAQAYDKRAPAGFVKN 120
           NRKQ +VTV G V+ N+VLKKV+ TGK AE WPYVPYN+VAYPY AQAYDK+APAG+VKN
Sbjct: 61  NRKQSRVTVSGNVEPNKVLKKVKSTGKRAEFWPYVPYNLVAYPYAAQAYDKKAPAGYVKN 120

Query: 121 AVQAVPSPNAVDEKLTTMFSDDNPNGCFVM 150
            VQA+PSPNA DE+ T+MFSD+NPN C +M
Sbjct: 121 VVQALPSPNATDERFTSMFSDENPNACSIM 150

The following BLAST results are available for this feature:

BLAST of CmoCh04G015320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HIP20_ARATH	1.7e-46	59.87	Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana GN...	[more]
HIP22_ARATH	5.5e-45	57.89	Heavy metal-associated isoprenylated plant protein 22 OS=Arabidopsis thaliana GN...	[more]
HIP21_ARATH	5.7e-42	54.67	Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana GN...	[more]
HIP26_ARATH	8.0e-36	50.65	Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN...	[more]
HIP27_ARATH	1.7e-33	55.30	Heavy metal-associated isoprenylated plant protein 27 OS=Arabidopsis thaliana GN...	[more]

BLAST of CmoCh04G015320 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTB7_CUCSA	1.3e-69	88.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611750 PE=4 SV=1	[more]
A0A067L0K9_JATCU	7.5e-57	70.67	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04678 PE=4 SV=1	[more]
A0A061E8C9_THECC	1.3e-56	72.00	Heavy metal transport/detoxification superfamily protein OS=Theobroma cacao GN=T...	[more]
B9HW84_POPTR	2.8e-56	70.00	Heavy-metal-associated domain-containing family protein OS=Populus trichocarpa G...	[more]
A0A0D2U4G1_GOSRA	3.1e-55	71.33	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G166300 PE=4 SV=1	[more]

BLAST of CmoCh04G015320 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G71050.1	9.6e-48	59.87	Heavy metal transport/detoxification superfamily protein	[more]
AT1G22990.1	3.1e-46	57.89	Heavy metal transport/detoxification superfamily protein	[more]
AT5G17450.1	3.2e-43	54.67	Heavy metal transport/detoxification superfamily protein	[more]
AT4G39700.1	1.0e-41	52.60	Heavy metal transport/detoxification superfamily protein	[more]
AT4G38580.1	4.5e-37	50.65	farnesylated protein 6	[more]

BLAST of CmoCh04G015320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778706200\|ref\|XP_011655816.1\|	1.9e-69	88.59	PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Cucumis sativu...	[more]
gi\|802596337\|ref\|XP_012072192.1\|	1.1e-56	70.67	PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Jatropha curca...	[more]
gi\|743889224\|ref\|XP_011038679.1\|	1.1e-56	70.67	PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Populus euphra...	[more]
gi\|590696127\|ref\|XP_007045081.1\|	1.8e-56	72.00	Heavy metal transport/detoxification superfamily protein [Theobroma cacao]	[more]
gi\|224111540\|ref\|XP_002315894.1\|	4.1e-56	70.00	heavy-metal-associated domain-containing family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006121	HMA_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G015320.1	CmoCh04G015320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 32..86 score: 3.5
IPR006121	Heavy metal-associated domain, HMA	PROFILE	PS50846	HMA_2	coord: 35..90 score: 11
IPR006121	Heavy metal-associated domain, HMA	unknown	SSF55008	HMA, heavy metal-associated domain	coord: 26..92 score: 3.8
None	No IPR available	GENE3D	G3DSA:3.30.70.100		coord: 25..92 score: 1.6
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 14..148 score: 2.6
None	No IPR available	PANTHER	PTHR22814:SF47	SUBFAMILY NOT NAMED	coord: 14..148 score: 2.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G015320	Cucsa.283000	Cucumber (Gy14) v1	cgycmoB0793
CmoCh04G015320	CmaCh15G009470	Cucurbita maxima (Rimu)	cmacmoB312
CmoCh04G015320	CmaCh18G009770	Cucurbita maxima (Rimu)	cmacmoB420
CmoCh04G015320	CmaCh04G014620	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G015320	Cla020451	Watermelon (97103) v1	cmowmB693
CmoCh04G015320	Csa5G611750	Cucumber (Chinese Long) v2	cmocuB738
CmoCh04G015320	MELO3C012307	Melon (DHL92) v3.5.1	cmomeB631
CmoCh04G015320	ClCG05G022160	Watermelon (Charleston Gray)	cmowcgB654
CmoCh04G015320	CSPI05G25880	Wild cucumber (PI 183967)	cmocpiB745
CmoCh04G015320	Lsi04G001940	Bottle gourd (USVL1VR-Ls)	cmolsiB660
CmoCh04G015320	Cp4.1LG09g03290	Cucurbita pepo (Zucchini)	cmocpeB651
CmoCh04G015320	Cp4.1LG13g03670	Cucurbita pepo (Zucchini)	cmocpeB659
CmoCh04G015320	Cp4.1LG01g13980	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G015320	MELO3C012307.2	Melon (DHL92) v3.6.1	cmomedB720
CmoCh04G015320	CsaV3_5G034960	Cucumber (Chinese Long) v3	cmocucB0874
CmoCh04G015320	Cla97C05G103920	Watermelon (97103) v2	cmowmbB729
CmoCh04G015320	Bhi07G000579	Wax gourd	cmowgoB0897
CmoCh04G015320	CsGy5G025360	Cucumber (Gy14) v2	cgybcmoB650
CmoCh04G015320	Carg01880	Silver-seed gourd	carcmoB1138

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G015320	CmoCh18G009800	Cucurbita moschata (Rifu)	cmocmoB336

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G015320	Silver-seed gourd	carcmoB1412