CmoCh04G015060 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G015060
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionGermin-like protein 18
LocationCmo_Chr04 : 7714735 .. 7715358 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGGTTCTGTTTCTCATCATCTTCCATGGATCTCTGACCTTCGCATCGGATCCCGATCCGGTATTCGACTTCTGCTTGCCGAGCGAGACTCATTCGCCGTGCAAGAACTCTTCCCTGGCTAAGGTAGAAGACTTCATTTTCTCTGGCATAAAGTTCCCTGGAAAGTTTATTAATGGATCTGGCTTTTCATCCATAGCTGTTAATTCGAACGTGTTCCCGGGTCTTAACACGCTCGGAATGTCTATGGTTAGAGCGGATTTTGACGTTGGAGGCGTCAACGTTCCGCATTTTCATCCTAGAGCTACTGAAGTGGCTGTTGTTCTTGAAGGAAAGATATATTCTGGGTTTGTGGATACCAGTAACCGGATATTTGCTAAGGTAATTGAGAAAGGTGAGGTCATGGTGTTTCCTAGAGGCTTAGTTCACTTCCAAATGAATGTTGGAGAAACTCCAGCAACAATTATAGGGAGTTTTGACAGCCAAAATCCTGGACTAATGAAAATTCCAGCTGCTGTTTTCGGATCCGGGATCAAAGAAGATCTCCTGGAGAAGGCTTTCGGGTTGAGCCCCGAGGAGCTCGCAAAGCTGAAAAAGAGGCATGCTTCCCATTCATTAGGCTAG

mRNA sequence

ATGCTGGTTCTGTTTCTCATCATCTTCCATGGATCTCTGACCTTCGCATCGGATCCCGATCCGGTATTCGACTTCTGCTTGCCGAGCGAGACTCATTCGCCGTGCAAGAACTCTTCCCTGGCTAAGGTAGAAGACTTCATTTTCTCTGGCATAAAGTTCCCTGGAAAGTTTATTAATGGATCTGGCTTTTCATCCATAGCTGTTAATTCGAACGTGTTCCCGGGTCTTAACACGCTCGGAATGTCTATGGTTAGAGCGGATTTTGACGTTGGAGGCGTCAACGTTCCGCATTTTCATCCTAGAGCTACTGAAGTGGCTGTTGTTCTTGAAGGAAAGATATATTCTGGGTTTGTGGATACCAGTAACCGGATATTTGCTAAGGTAATTGAGAAAGGTGAGGTCATGGTGTTTCCTAGAGGCTTAGTTCACTTCCAAATGAATGTTGGAGAAACTCCAGCAACAATTATAGGGAGTTTTGACAGCCAAAATCCTGGACTAATGAAAATTCCAGCTGCTGTTTTCGGATCCGGGATCAAAGAAGATCTCCTGGAGAAGGCTTTCGGGTTGAGCCCCGAGGAGCTCGCAAAGCTGAAAAAGAGGCATGCTTCCCATTCATTAGGCTAG

Coding sequence (CDS)

ATGCTGGTTCTGTTTCTCATCATCTTCCATGGATCTCTGACCTTCGCATCGGATCCCGATCCGGTATTCGACTTCTGCTTGCCGAGCGAGACTCATTCGCCGTGCAAGAACTCTTCCCTGGCTAAGGTAGAAGACTTCATTTTCTCTGGCATAAAGTTCCCTGGAAAGTTTATTAATGGATCTGGCTTTTCATCCATAGCTGTTAATTCGAACGTGTTCCCGGGTCTTAACACGCTCGGAATGTCTATGGTTAGAGCGGATTTTGACGTTGGAGGCGTCAACGTTCCGCATTTTCATCCTAGAGCTACTGAAGTGGCTGTTGTTCTTGAAGGAAAGATATATTCTGGGTTTGTGGATACCAGTAACCGGATATTTGCTAAGGTAATTGAGAAAGGTGAGGTCATGGTGTTTCCTAGAGGCTTAGTTCACTTCCAAATGAATGTTGGAGAAACTCCAGCAACAATTATAGGGAGTTTTGACAGCCAAAATCCTGGACTAATGAAAATTCCAGCTGCTGTTTTCGGATCCGGGATCAAAGAAGATCTCCTGGAGAAGGCTTTCGGGTTGAGCCCCGAGGAGCTCGCAAAGCTGAAAAAGAGGCATGCTTCCCATTCATTAGGCTAG
BLAST of CmoCh04G015060 vs. Swiss-Prot
Match: GL32_ARATH (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 4.8e-63
Identity = 116/208 (55.77%), Postives = 154/208 (74.04%), Query Frame = 1

Query: 4   LFLIIFHGSLTFASDPDPVFDFCLPS-----------ETHSPCKNSSLAKVEDFIFSGIK 63
           L L+ F+   T ASDPDP+ DFC+P             T+ PCKNSS    EDF+FSG+K
Sbjct: 12  LCLLCFNVCFTLASDPDPIQDFCIPKPVTSPYHDHHFSTNLPCKNSSEVTTEDFVFSGLK 71

Query: 64  FPGKFINGSGFSSIAVNSNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEVAVVLEGK 123
             G F   +GF+++ V    FPGLNTLG+S VRAD   G +N PH+HPRATEVA +++G+
Sbjct: 72  TAGNFTE-TGFATVPVGPENFPGLNTLGISFVRADLKPGSINPPHYHPRATEVAHLVKGR 131

Query: 124 IYSGFVDTSNRIFAKVIEKGEVMVFPRGLVHFQMNVGETPATIIGSFDSQNPGLMKIPAA 183
           +YSGFVD++N+++AKV+E+GE+MV+P+GLVHFQMNVG+  ATI+G  +SQNPG+ KIP+ 
Sbjct: 132 VYSGFVDSNNKVYAKVMEEGEMMVYPKGLVHFQMNVGDVTATIVGGLNSQNPGIQKIPSV 191

Query: 184 VFGSGIKEDLLEKAFGLSPEELAKLKKR 201
           VFGSGI E+LL KAFGLS +++  LKKR
Sbjct: 192 VFGSGINEELLMKAFGLSLKQIGTLKKR 218

BLAST of CmoCh04G015060 vs. Swiss-Prot
Match: GL24_ORYSJ (Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.7e-58
Identity = 109/211 (51.66%), Postives = 149/211 (70.62%), Query Frame = 1

Query: 2   LVLFLIIFHGSLTFASDPDPVFDFCLPSETHS-----------PCKNSSLAKVEDFIFSG 61
           L+L L +   ++    DPD V DFC+P                PC++ +     DF FSG
Sbjct: 8   LLLLLAVLLPAMAARGDPDAVQDFCVPDAGRGRPVELAMLPAYPCRSPANLTAGDFAFSG 67

Query: 62  IKFPGKFINGSGFSSIAVNSNVFPGLNTLGMSMVRADFDV-GGVNVPHFHPRATEVAVVL 121
           ++  G F   +GF+ ++V    FPGL+TLGMS  RAD    GGVN PH+HPRATE A+VL
Sbjct: 68  VRAAGNFSPETGFAGVSVTPAQFPGLHTLGMSFARADLSAAGGVNPPHYHPRATETALVL 127

Query: 122 EGKIYSGFVDTSNRIFAKVIEKGEVMVFPRGLVHFQMNVGETPATIIGSFDSQNPGLMKI 181
            G++Y+GFVD+  R+FAKV+E+GEVMVFPR +VHFQ+NVG+TPAT+ G+F+S+NPG+++I
Sbjct: 128 AGRVYAGFVDSGGRLFAKVLEQGEVMVFPRAMVHFQLNVGDTPATVYGAFNSENPGIVRI 187

Query: 182 PAAVFGSGIKEDLLEKAFGLSPEELAKLKKR 201
           PA VFGSGI+E +LE+AFGL+P EL +L+KR
Sbjct: 188 PATVFGSGIREAVLERAFGLTPAELRRLEKR 218

BLAST of CmoCh04G015060 vs. Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 7.4e-40
Identity = 88/188 (46.81%), Postives = 115/188 (61.17%), Query Frame = 1

Query: 10  HGSLTFASDPDPVFDFCLPSETHS------PCKNSSLAKVEDFIFSGIKFPGKFINGSGF 69
           HG +  ASDP  + D C+  +  +       CK+      EDF FSG+   G   N  G 
Sbjct: 23  HGGVV-ASDPSHLQDLCVADKASTVRVNGVACKDGEDVAAEDFFFSGLHMAGNTTNKQGS 82

Query: 70  SSIAVNSNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEVAVVLEGKIYSGFVDTS-- 129
           +  AVN    PGLNTLG+S+ R D+ + G+N PH HPRATE+  VLEG +Y GFV ++  
Sbjct: 83  AVTAVNVAQVPGLNTLGISLARIDYALHGLNPPHTHPRATEILTVLEGSLYVGFVTSNPE 142

Query: 130 NRIFAKVIEKGEVMVFPRGLVHFQMNVGETPATIIGSFDSQNPGLMKIPAAVFGS--GIK 188
           N++F KVI KG+V VFP+GLVHFQ N G T A  I +  SQNPG++ +  AVFGS   I 
Sbjct: 143 NKLFTKVINKGDVFVFPKGLVHFQFNYGTTDAVAIVALSSQNPGVITVANAVFGSKPSIT 202

BLAST of CmoCh04G015060 vs. Swiss-Prot
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.3e-39
Identity = 83/196 (42.35%), Postives = 120/196 (61.22%), Query Frame = 1

Query: 16  ASDPDPVFDFCLPSETHS------PCKNSSLAKVEDFIFSGIKFPGKFINGSGFSSIAVN 75
           A DPD + D C+  ++H       PCK +      DF F+GI  P    +  G +    N
Sbjct: 22  AYDPDALQDLCVADKSHGTKLNGFPCKETLNITESDFFFAGISKPAVINSTMGSAVTGAN 81

Query: 76  SNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEVAVVLEGKIYSGFVDTSNRIFAKVI 135
               PGLNTL +S+ R D+  GG+N PH HPRATEV  VLEG++  GF+ T+N++F K I
Sbjct: 82  VEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITTANKLFTKTI 141

Query: 136 EKGEVMVFPRGLVHFQMNVGETPATIIGSFDSQNPGLMKIPAAVFGS--GIKEDLLEKAF 195
           + GEV VFPRGLVHFQ N G++PA+++ +F+SQ PG   + A +F +   + ED+L K F
Sbjct: 142 KIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFAAEPALPEDVLTKTF 201

Query: 196 GLSPEELAKLKKRHAS 204
            +  + + K+K+R A+
Sbjct: 202 QVGSKMVDKIKERLAT 217

BLAST of CmoCh04G015060 vs. Swiss-Prot
Match: GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.8e-39
Identity = 89/197 (45.18%), Postives = 117/197 (59.39%), Query Frame = 1

Query: 14  TFASDPDPVFDFCL------PSETHSPCKNSSLAKVEDFIFSGIKFPGKFINGSGFSSIA 73
           + +SD DP+ DFC+      PS    PCK+S      DF FSG+  P      +G +   
Sbjct: 25  SLSSDSDPLQDFCVGDLKASPSINGFPCKSS--VSASDFFFSGLGGPLNTSTPNGVAVSP 84

Query: 74  VNSNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEVAVVLEGKIYSGFVDTSNRIFAK 133
            N   FPGLNTLG+SM   +F  GGVN PH HPRATE  VV+EG ++ GF+ T+N +F+K
Sbjct: 85  ANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFVGFLTTNNTLFSK 144

Query: 134 VIEKGEVMVFPRGLVHFQMNVGETPATIIGSFDSQNPGLMKIPAAVFGSG--IKEDLLEK 193
           V+  GE+ V PRGLVHFQ NVG+  A +I SF+SQ PG   +P+ +FGS   I   +L K
Sbjct: 145 VLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTLFGSNPTIPNAVLTK 204

Query: 194 AFGLSPEELAKLKKRHA 203
            F      + KLK + A
Sbjct: 205 TFRTDDVTVNKLKSKFA 219

BLAST of CmoCh04G015060 vs. TrEMBL
Match: V4U9Q5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018008mg PE=3 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.4e-82
Identity = 160/210 (76.19%), Postives = 178/210 (84.76%), Query Frame = 1

Query: 1   MLVLFLIIFHGSLTFASDPDPVFDFCL----PSETHSPCKNSSLAKVEDFIFSGIKFPGK 60
           + VLF  +FH  +T ASDPDPV DFC+     + T  PCKNSSL  VEDF+FSGIKF GK
Sbjct: 5   LTVLFFGLFHSYVTLASDPDPVNDFCVLNRSSATTSLPCKNSSLVTVEDFVFSGIKFRGK 64

Query: 61  FINGSGFSSIAVNSNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEVAVVLEGKIYSG 120
           F + +G +SI  N NVFPGLNTLGMSMVRADFDVGGVNVPH HPRATE+AVVLEGKIYSG
Sbjct: 65  F-SETGLASIPSNVNVFPGLNTLGMSMVRADFDVGGVNVPHSHPRATEIAVVLEGKIYSG 124

Query: 121 FVDTSNRIFAKVIEKGEVMVFPRGLVHFQMNVGETPATIIGSFDSQNPGLMKIPAAVFGS 180
           FVDT NRIFAKVIEKGEVMVFPRGLVHFQMNVG+T ATI+GSFDSQNPGL KIP+AVFGS
Sbjct: 125 FVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNPGLQKIPSAVFGS 184

Query: 181 GIKEDLLEKAFGLSPEELAKLKKRHASHSL 207
            IKE+LLEKAFGL+P+E+AKL+KR A H L
Sbjct: 185 NIKEELLEKAFGLTPKEIAKLRKRFAPHRL 213

BLAST of CmoCh04G015060 vs. TrEMBL
Match: A0A067E0I8_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g038563mg PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 9.3e-82
Identity = 157/198 (79.29%), Postives = 173/198 (87.37%), Query Frame = 1

Query: 13  LTFASDPDPVFDFCL----PSETHSPCKNSSLAKVEDFIFSGIKFPGKFINGSGFSSIAV 72
           +T ASDPDPV DFC+     + T  PCKNSSL  VEDF+FSGIKF GKF + +G +SI V
Sbjct: 2   VTLASDPDPVNDFCVLNRSSATTSLPCKNSSLVTVEDFVFSGIKFRGKF-SETGLASIPV 61

Query: 73  NSNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEVAVVLEGKIYSGFVDTSNRIFAKV 132
           N NVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATE+AVVLEGKIYSGFVDT NRIFAKV
Sbjct: 62  NVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKV 121

Query: 133 IEKGEVMVFPRGLVHFQMNVGETPATIIGSFDSQNPGLMKIPAAVFGSGIKEDLLEKAFG 192
           IEKGEVMVFPRGLVHFQMNVG+T ATI+GSFDSQNPGL KIP+AVFGS IKE+LLEKAFG
Sbjct: 122 IEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNPGLQKIPSAVFGSNIKEELLEKAFG 181

Query: 193 LSPEELAKLKKRHASHSL 207
           L+P+E+AKL+KR A H L
Sbjct: 182 LTPKEIAKLRKRFAPHRL 198

BLAST of CmoCh04G015060 vs. TrEMBL
Match: M5WMY1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016341mg PE=3 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 3.3e-79
Identity = 149/208 (71.63%), Postives = 181/208 (87.02%), Query Frame = 1

Query: 1   MLVLFLIIFHGSLTFASDPDPVFDFCLP---SETHSP-CKNSSLAKVEDFIFSGIKFPGK 60
           M+VLF+I+ +  +T ASDPDPV DFC+    S +H+  CKNSSL  VEDF+++GIK PGK
Sbjct: 5   MVVLFVILLNSYVTRASDPDPVQDFCIANTESASHAKQCKNSSLVTVEDFVYAGIKVPGK 64

Query: 61  FINGSGFSSIAVNSNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEVAVVLEGKIYSG 120
           F   +G S+++VNSNVFPGLNTLGMS+VRADF+VGGVNVPHFHPRATE+A VLEG IYSG
Sbjct: 65  F-GPTGLSAVSVNSNVFPGLNTLGMSLVRADFEVGGVNVPHFHPRATEIAFVLEGTIYSG 124

Query: 121 FVDTSNRIFAKVIEKGEVMVFPRGLVHFQMNVGETPATIIGSFDSQNPGLMKIPAAVFGS 180
           FVDT+N++FAKVI+KGEVMVFPRGLVHFQMNVG+TPATI+GSFDSQNPG  +IPAA+FGS
Sbjct: 125 FVDTNNKVFAKVIKKGEVMVFPRGLVHFQMNVGDTPATILGSFDSQNPGSQRIPAAIFGS 184

Query: 181 GIKEDLLEKAFGLSPEELAKLKKRHASH 205
           GIKE LLEKAFG+S +E++KLKK+ + H
Sbjct: 185 GIKEKLLEKAFGMSSKEISKLKKKLSPH 211

BLAST of CmoCh04G015060 vs. TrEMBL
Match: A0A0D2VMW0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G159500 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.8e-78
Identity = 144/203 (70.94%), Postives = 173/203 (85.22%), Query Frame = 1

Query: 2   LVLFLIIFHGSLTFASDPDPVFDFCLPSETHSPCKNSSLAKVEDFIFSGIKFPGKFINGS 61
           L+L L +++   +  SDPDPV DFC+PS   + CKNSS A VEDF+FSGIKFPGKF + +
Sbjct: 7   LLLVLFLYYAITSLGSDPDPVQDFCIPSTGIAACKNSSAATVEDFVFSGIKFPGKF-SET 66

Query: 62  GFSSIAVNSNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEVAVVLEGKIYSGFVDTS 121
           G ++ +VN N+FPGLN LGMS VRADF+VGG+N+PHFHPRATE+A VLEGKIYSGFVDT 
Sbjct: 67  GLAATSVNVNIFPGLNILGMSFVRADFEVGGINMPHFHPRATEIAFVLEGKIYSGFVDTE 126

Query: 122 NRIFAKVIEKGEVMVFPRGLVHFQMNVGETPATIIGSFDSQNPGLMKIPAAVFGSGIKED 181
           NRIFAKVIEKGEVMVFP+GL+HFQMNV + PATI+GSFDSQNPGL++IP AVFGSGI+E 
Sbjct: 127 NRIFAKVIEKGEVMVFPKGLLHFQMNVADMPATILGSFDSQNPGLVRIPNAVFGSGIEEK 186

Query: 182 LLEKAFGLSPEELAKLKKRHASH 205
           LLEKAFGL+ +E+AKL+KR A H
Sbjct: 187 LLEKAFGLNSKEIAKLRKRFAPH 208

BLAST of CmoCh04G015060 vs. TrEMBL
Match: C7S8D2_SOYBN (Germin-like protein 18 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.8e-77
Identity = 152/203 (74.88%), Postives = 171/203 (84.24%), Query Frame = 1

Query: 3   VLFLIIFHGSLTFASDPDPVFDFCL---PSETHSPCKNSSLAKVEDFIFSGIKFPGKFIN 62
           VL +++       ASDPDPV DFC+   P  + S CKNSS A VEDF +SGIK PG F  
Sbjct: 7   VLLVVLLFIIAALASDPDPVMDFCIAKSPDNSFS-CKNSSTATVEDFTYSGIKSPGNF-K 66

Query: 63  GSGFSSIAVNSNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEVAVVLEGKIYSGFVD 122
            +GFSS+AVNSNVFPGLNTLG+S VRADF VGGVNVPHFHPRATEVA VLEGKIYSGFVD
Sbjct: 67  QTGFSSMAVNSNVFPGLNTLGVSFVRADFGVGGVNVPHFHPRATEVAFVLEGKIYSGFVD 126

Query: 123 TSNRIFAKVIEKGEVMVFPRGLVHFQMNVGETPATIIGSFDSQNPGLMKIPAAVFGSGIK 182
           T+N++FAKV+EKGEVMVFPRGLVHFQMNVG+ PATI+GSFDSQNPGLM+IP AVFGS IK
Sbjct: 127 TNNKVFAKVLEKGEVMVFPRGLVHFQMNVGDRPATILGSFDSQNPGLMRIPNAVFGSDIK 186

Query: 183 EDLLEKAFGLSPEELAKLKKRHA 203
           E+LLEKAFGLS +EL+KLKKR A
Sbjct: 187 EELLEKAFGLSSKELSKLKKREA 207

BLAST of CmoCh04G015060 vs. TAIR10
Match: AT3G10080.1 (AT3G10080.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 242.3 bits (617), Expect = 2.7e-64
Identity = 116/208 (55.77%), Postives = 154/208 (74.04%), Query Frame = 1

Query: 4   LFLIIFHGSLTFASDPDPVFDFCLPS-----------ETHSPCKNSSLAKVEDFIFSGIK 63
           L L+ F+   T ASDPDP+ DFC+P             T+ PCKNSS    EDF+FSG+K
Sbjct: 12  LCLLCFNVCFTLASDPDPIQDFCIPKPVTSPYHDHHFSTNLPCKNSSEVTTEDFVFSGLK 71

Query: 64  FPGKFINGSGFSSIAVNSNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEVAVVLEGK 123
             G F   +GF+++ V    FPGLNTLG+S VRAD   G +N PH+HPRATEVA +++G+
Sbjct: 72  TAGNFTE-TGFATVPVGPENFPGLNTLGISFVRADLKPGSINPPHYHPRATEVAHLVKGR 131

Query: 124 IYSGFVDTSNRIFAKVIEKGEVMVFPRGLVHFQMNVGETPATIIGSFDSQNPGLMKIPAA 183
           +YSGFVD++N+++AKV+E+GE+MV+P+GLVHFQMNVG+  ATI+G  +SQNPG+ KIP+ 
Sbjct: 132 VYSGFVDSNNKVYAKVMEEGEMMVYPKGLVHFQMNVGDVTATIVGGLNSQNPGIQKIPSV 191

Query: 184 VFGSGIKEDLLEKAFGLSPEELAKLKKR 201
           VFGSGI E+LL KAFGLS +++  LKKR
Sbjct: 192 VFGSGINEELLMKAFGLSLKQIGTLKKR 218

BLAST of CmoCh04G015060 vs. TAIR10
Match: AT1G02335.1 (AT1G02335.1 germin-like protein subfamily 2 member 2 precursor)

HSP 1 Score: 164.5 bits (415), Expect = 7.1e-41
Identity = 83/196 (42.35%), Postives = 120/196 (61.22%), Query Frame = 1

Query: 16  ASDPDPVFDFCLPSETHS------PCKNSSLAKVEDFIFSGIKFPGKFINGSGFSSIAVN 75
           A DPD + D C+  ++H       PCK +      DF F+GI  P    +  G +    N
Sbjct: 22  AYDPDALQDLCVADKSHGTKLNGFPCKETLNITESDFFFAGISKPAVINSTMGSAVTGAN 81

Query: 76  SNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEVAVVLEGKIYSGFVDTSNRIFAKVI 135
               PGLNTL +S+ R D+  GG+N PH HPRATEV  VLEG++  GF+ T+N++F K I
Sbjct: 82  VEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITTANKLFTKTI 141

Query: 136 EKGEVMVFPRGLVHFQMNVGETPATIIGSFDSQNPGLMKIPAAVFGS--GIKEDLLEKAF 195
           + GEV VFPRGLVHFQ N G++PA+++ +F+SQ PG   + A +F +   + ED+L K F
Sbjct: 142 KIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFAAEPALPEDVLTKTF 201

Query: 196 GLSPEELAKLKKRHAS 204
            +  + + K+K+R A+
Sbjct: 202 QVGSKMVDKIKERLAT 217

BLAST of CmoCh04G015060 vs. TAIR10
Match: AT1G18980.1 (AT1G18980.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 162.5 bits (410), Expect = 2.7e-40
Identity = 89/197 (45.18%), Postives = 117/197 (59.39%), Query Frame = 1

Query: 14  TFASDPDPVFDFCL------PSETHSPCKNSSLAKVEDFIFSGIKFPGKFINGSGFSSIA 73
           + +SD DP+ DFC+      PS    PCK+S      DF FSG+  P      +G +   
Sbjct: 25  SLSSDSDPLQDFCVGDLKASPSINGFPCKSS--VSASDFFFSGLGGPLNTSTPNGVAVSP 84

Query: 74  VNSNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEVAVVLEGKIYSGFVDTSNRIFAK 133
            N   FPGLNTLG+SM   +F  GGVN PH HPRATE  VV+EG ++ GF+ T+N +F+K
Sbjct: 85  ANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFVGFLTTNNTLFSK 144

Query: 134 VIEKGEVMVFPRGLVHFQMNVGETPATIIGSFDSQNPGLMKIPAAVFGSG--IKEDLLEK 193
           V+  GE+ V PRGLVHFQ NVG+  A +I SF+SQ PG   +P+ +FGS   I   +L K
Sbjct: 145 VLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTLFGSNPTIPNAVLTK 204

Query: 194 AFGLSPEELAKLKKRHA 203
            F      + KLK + A
Sbjct: 205 TFRTDDVTVNKLKSKFA 219

BLAST of CmoCh04G015060 vs. TAIR10
Match: AT3G05950.1 (AT3G05950.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 162.5 bits (410), Expect = 2.7e-40
Identity = 92/211 (43.60%), Postives = 121/211 (57.35%), Query Frame = 1

Query: 6   LIIFHGSLTFASDPDPVFDFCLPSETHSP-------CKNSSLAKVEDFIFSGIKFPGKFI 65
           L+    S     DP P+ DFC+  +  S        CK+    K EDF  SG+   G  I
Sbjct: 14  LLALASSFVSCYDPSPLQDFCVAVDDASGVFVNGKFCKDPKYVKAEDFFTSGLNIAGNTI 73

Query: 66  NGSGFSSIAVNSNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEVAVVLEGKIYSGFV 125
           N  G +   VN +  PGLNTLG+S+VR DF  GG N PH HPRATE+ VV+EG +  GFV
Sbjct: 74  NRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVEGTLLVGFV 133

Query: 126 DT---SNRIFAKVIEKGEVMVFPRGLVHFQMNVGETPATIIGSFDSQNPGLMKIPAAVFG 185
            +   +NR+F+KV+  G+V VFP G++HFQ+NVG T A       SQNPG + I  AVFG
Sbjct: 134 TSNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVGRTNAVAFAGLGSQNPGTITIADAVFG 193

Query: 186 S--GIKEDLLEKAFGLSPEELAKLKKRHASH 205
           S   I  ++L KAF L    +  L+ R +S+
Sbjct: 194 SKPSIMPEILAKAFQLDVNVVKYLEARFSSN 224

BLAST of CmoCh04G015060 vs. TAIR10
Match: AT5G38940.1 (AT5G38940.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 160.2 bits (404), Expect = 1.3e-39
Identity = 88/212 (41.51%), Postives = 125/212 (58.96%), Query Frame = 1

Query: 1   MLVLFLIIFHGSLTFASDPDPVFDFCLPSETHSP--------CKNSSLAKVEDFIFSGIK 60
           + VL L+     L  ASDP  + DFC+ + T +         CK+  L   +DF FSG++
Sbjct: 9   LAVLSLLALTLPLAIASDPSQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFFSGLQ 68

Query: 61  FPGKFINGSGFSSIAVNSNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEVAVVLEGK 120
                 +  G +  AVN N   GLNTLG+S+VR D+ V G N PH HPRATE+ VV +G 
Sbjct: 69  TARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVVEQGT 128

Query: 121 IYSGFVDTS--NRIFAKVIEKGEVMVFPRGLVHFQMNVGETPATIIGSFDSQNPGLMKIP 180
           +  GFV ++  NR+F+KV+ +G+V VFP GL+HFQ N+G+ PA    +  SQNPG++ I 
Sbjct: 129 LLVGFVTSNPDNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIA 188

Query: 181 AAVFGS--GIKEDLLEKAFGLSPEELAKLKKR 201
             VFG+   I   +L KAF L+P  +  L+ +
Sbjct: 189 NTVFGANPAINPTILAKAFQLNPRVVMDLQTK 220

BLAST of CmoCh04G015060 vs. NCBI nr
Match: gi|449435160|ref|XP_004135363.1| (PREDICTED: germin-like protein subfamily 3 member 2 [Cucumis sativus])

HSP 1 Score: 365.2 bits (936), Expect = 7.8e-98
Identity = 187/210 (89.05%), Postives = 195/210 (92.86%), Query Frame = 1

Query: 1   MLVLFLII-FHGSLTFASDPDPVFDFCLPSET-----HSPCKNSSLAKVEDFIFSGIKFP 60
           MLVLF II FH SLT ASDPDPVFDFCLP+ET     HS CKNSSLA+VEDFIFSGIKFP
Sbjct: 1   MLVLFFIILFHRSLTLASDPDPVFDFCLPNETSAGSSHSLCKNSSLARVEDFIFSGIKFP 60

Query: 61  GKFINGSGFSSIAVNSNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEVAVVLEGKIY 120
           GKF NGSGFSSIAVNS VFPGLNTLGMS+VRADFDVGGVNVPHFHPRATEVAVVLEGK+Y
Sbjct: 61  GKF-NGSGFSSIAVNSKVFPGLNTLGMSLVRADFDVGGVNVPHFHPRATEVAVVLEGKVY 120

Query: 121 SGFVDTSNRIFAKVIEKGEVMVFPRGLVHFQMNVGETPATIIGSFDSQNPGLMKIPAAVF 180
           SGFVDT+N+IFAKVIEKGEVMVFPRGLVHFQMNVGE PATIIGSFDSQNPGLMKIP+AVF
Sbjct: 121 SGFVDTNNQIFAKVIEKGEVMVFPRGLVHFQMNVGEIPATIIGSFDSQNPGLMKIPSAVF 180

Query: 181 GSGIKEDLLEKAFGLSPEELAKLKKRHASH 205
           GSGIKE+LLEKAFGLSPEEL KLKKRHA H
Sbjct: 181 GSGIKEELLEKAFGLSPEELVKLKKRHAPH 209

BLAST of CmoCh04G015060 vs. NCBI nr
Match: gi|659091840|ref|XP_008446760.1| (PREDICTED: germin-like protein subfamily 3 member 2 [Cucumis melo])

HSP 1 Score: 365.2 bits (936), Expect = 7.8e-98
Identity = 186/210 (88.57%), Postives = 195/210 (92.86%), Query Frame = 1

Query: 1   MLVLFLII-FHGSLTFASDPDPVFDFCLPSET-----HSPCKNSSLAKVEDFIFSGIKFP 60
           MLVLF II FHGSLT ASDPDPVFDFCLP+ET     HS CKNSSLA+VEDFIFSGIKFP
Sbjct: 1   MLVLFFIILFHGSLTLASDPDPVFDFCLPNETSAGSSHSSCKNSSLARVEDFIFSGIKFP 60

Query: 61  GKFINGSGFSSIAVNSNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEVAVVLEGKIY 120
           GKF NGSGFSS AVNS VFPGLNTLGMS+VRADFDVGGVNVPHFHPRATEVAVVLEGK+Y
Sbjct: 61  GKF-NGSGFSSTAVNSKVFPGLNTLGMSLVRADFDVGGVNVPHFHPRATEVAVVLEGKVY 120

Query: 121 SGFVDTSNRIFAKVIEKGEVMVFPRGLVHFQMNVGETPATIIGSFDSQNPGLMKIPAAVF 180
           SGFVDT+N+IFAKVIEKGEVMVFPRGLVHFQMNVGE PATIIGSFDSQNPGLMKIP AVF
Sbjct: 121 SGFVDTNNQIFAKVIEKGEVMVFPRGLVHFQMNVGEIPATIIGSFDSQNPGLMKIPTAVF 180

Query: 181 GSGIKEDLLEKAFGLSPEELAKLKKRHASH 205
           GSGI+E+LLEKAFGLSP+ELAKLKKRHA H
Sbjct: 181 GSGIEEELLEKAFGLSPKELAKLKKRHAPH 209

BLAST of CmoCh04G015060 vs. NCBI nr
Match: gi|568863595|ref|XP_006485225.1| (PREDICTED: germin-like protein subfamily 3 member 2 [Citrus sinensis])

HSP 1 Score: 319.3 bits (817), Expect = 4.9e-84
Identity = 162/210 (77.14%), Postives = 180/210 (85.71%), Query Frame = 1

Query: 1   MLVLFLIIFHGSLTFASDPDPVFDFCL----PSETHSPCKNSSLAKVEDFIFSGIKFPGK 60
           + VLF  +FH  +T ASDPDPV DFC+     + T  PCKNSSL  VEDF+FSGIKF GK
Sbjct: 5   LTVLFFGLFHSYVTLASDPDPVNDFCVLNRSSATTSLPCKNSSLVTVEDFVFSGIKFRGK 64

Query: 61  FINGSGFSSIAVNSNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEVAVVLEGKIYSG 120
           F + +G +SI VN NVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATE+AVVLEGKIYSG
Sbjct: 65  F-SETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSG 124

Query: 121 FVDTSNRIFAKVIEKGEVMVFPRGLVHFQMNVGETPATIIGSFDSQNPGLMKIPAAVFGS 180
           FVDT NRIFAKVIEKGEVMVFPRGLVHFQMNVG+T ATI+GSFDSQNPGL KIP+AVFGS
Sbjct: 125 FVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNPGLQKIPSAVFGS 184

Query: 181 GIKEDLLEKAFGLSPEELAKLKKRHASHSL 207
            IKE+LLEKAFGL+P+E+AKL+KR A H L
Sbjct: 185 NIKEELLEKAFGLTPKEIAKLRKRFAPHRL 213

BLAST of CmoCh04G015060 vs. NCBI nr
Match: gi|567906815|ref|XP_006445721.1| (hypothetical protein CICLE_v10018008mg [Citrus clementina])

HSP 1 Score: 313.9 bits (803), Expect = 2.1e-82
Identity = 160/210 (76.19%), Postives = 178/210 (84.76%), Query Frame = 1

Query: 1   MLVLFLIIFHGSLTFASDPDPVFDFCL----PSETHSPCKNSSLAKVEDFIFSGIKFPGK 60
           + VLF  +FH  +T ASDPDPV DFC+     + T  PCKNSSL  VEDF+FSGIKF GK
Sbjct: 5   LTVLFFGLFHSYVTLASDPDPVNDFCVLNRSSATTSLPCKNSSLVTVEDFVFSGIKFRGK 64

Query: 61  FINGSGFSSIAVNSNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEVAVVLEGKIYSG 120
           F + +G +SI  N NVFPGLNTLGMSMVRADFDVGGVNVPH HPRATE+AVVLEGKIYSG
Sbjct: 65  F-SETGLASIPSNVNVFPGLNTLGMSMVRADFDVGGVNVPHSHPRATEIAVVLEGKIYSG 124

Query: 121 FVDTSNRIFAKVIEKGEVMVFPRGLVHFQMNVGETPATIIGSFDSQNPGLMKIPAAVFGS 180
           FVDT NRIFAKVIEKGEVMVFPRGLVHFQMNVG+T ATI+GSFDSQNPGL KIP+AVFGS
Sbjct: 125 FVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNPGLQKIPSAVFGS 184

Query: 181 GIKEDLLEKAFGLSPEELAKLKKRHASHSL 207
            IKE+LLEKAFGL+P+E+AKL+KR A H L
Sbjct: 185 NIKEELLEKAFGLTPKEIAKLRKRFAPHRL 213

BLAST of CmoCh04G015060 vs. NCBI nr
Match: gi|641825116|gb|KDO44401.1| (hypothetical protein CISIN_1g038563mg, partial [Citrus sinensis])

HSP 1 Score: 311.2 bits (796), Expect = 1.3e-81
Identity = 157/198 (79.29%), Postives = 173/198 (87.37%), Query Frame = 1

Query: 13  LTFASDPDPVFDFCL----PSETHSPCKNSSLAKVEDFIFSGIKFPGKFINGSGFSSIAV 72
           +T ASDPDPV DFC+     + T  PCKNSSL  VEDF+FSGIKF GKF + +G +SI V
Sbjct: 2   VTLASDPDPVNDFCVLNRSSATTSLPCKNSSLVTVEDFVFSGIKFRGKF-SETGLASIPV 61

Query: 73  NSNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEVAVVLEGKIYSGFVDTSNRIFAKV 132
           N NVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATE+AVVLEGKIYSGFVDT NRIFAKV
Sbjct: 62  NVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKV 121

Query: 133 IEKGEVMVFPRGLVHFQMNVGETPATIIGSFDSQNPGLMKIPAAVFGSGIKEDLLEKAFG 192
           IEKGEVMVFPRGLVHFQMNVG+T ATI+GSFDSQNPGL KIP+AVFGS IKE+LLEKAFG
Sbjct: 122 IEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNPGLQKIPSAVFGSNIKEELLEKAFG 181

Query: 193 LSPEELAKLKKRHASHSL 207
           L+P+E+AKL+KR A H L
Sbjct: 182 LTPKEIAKLRKRFAPHRL 198

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
GL32_ARATH4.8e-6355.77Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE... [more]
GL24_ORYSJ2.7e-5851.66Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=... [more]
GL23_ORYSJ7.4e-4046.81Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800... [more]
GL22_ARATH1.3e-3942.35Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE... [more]
GLT2_ARATH4.8e-3945.18Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE... [more]
Match NameE-valueIdentityDescription
V4U9Q5_9ROSI1.4e-8276.19Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018008mg PE=3 SV=1[more]
A0A067E0I8_CITSI9.3e-8279.29Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g038563mg PE=3 S... [more]
M5WMY1_PRUPE3.3e-7971.63Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016341mg PE=3 SV=1[more]
A0A0D2VMW0_GOSRA2.8e-7870.94Uncharacterized protein OS=Gossypium raimondii GN=B456_011G159500 PE=3 SV=1[more]
C7S8D2_SOYBN1.8e-7774.88Germin-like protein 18 OS=Glycine max PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT3G10080.12.7e-6455.77 RmlC-like cupins superfamily protein[more]
AT1G02335.17.1e-4142.35 germin-like protein subfamily 2 member 2 precursor[more]
AT1G18980.12.7e-4045.18 RmlC-like cupins superfamily protein[more]
AT3G05950.12.7e-4043.60 RmlC-like cupins superfamily protein[more]
AT5G38940.11.3e-3941.51 RmlC-like cupins superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449435160|ref|XP_004135363.1|7.8e-9889.05PREDICTED: germin-like protein subfamily 3 member 2 [Cucumis sativus][more]
gi|659091840|ref|XP_008446760.1|7.8e-9888.57PREDICTED: germin-like protein subfamily 3 member 2 [Cucumis melo][more]
gi|568863595|ref|XP_006485225.1|4.9e-8477.14PREDICTED: germin-like protein subfamily 3 member 2 [Citrus sinensis][more]
gi|567906815|ref|XP_006445721.1|2.1e-8276.19hypothetical protein CICLE_v10018008mg [Citrus clementina][more]
gi|641825116|gb|KDO44401.1|1.3e-8179.29hypothetical protein CISIN_1g038563mg, partial [Citrus sinensis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001929Germin
IPR006045Cupin_1
IPR011051RmlC_Cupin_sf
IPR014710RmlC-like_jellyroll
IPR019780Germin_Mn-BS
Vocabulary: Molecular Function
TermDefinition
GO:0030145manganese ion binding
GO:0045735nutrient reservoir activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0019430 removal of superoxide radicals
biological_process GO:0006310 DNA recombination
biological_process GO:0006281 DNA repair
biological_process GO:0006260 DNA replication
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0008150 biological_process
cellular_component GO:0005576 extracellular region
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0030145 manganese ion binding
molecular_function GO:0045735 nutrient reservoir activity
molecular_function GO:0004784 superoxide dismutase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0005198 structural molecule activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G015060.1CmoCh04G015060.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 127..147
score: 5.4E-25coord: 97..117
score: 5.4E-25coord: 160..175
score: 5.4
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 52..193
score: 2.9
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 49..195
score: 1.2
IPR011051RmlC-like cupin domainunknownSSF51182RmlC-like cupinscoord: 45..201
score: 7.7
IPR014710RmlC-like jelly roll foldGENE3DG3DSA:2.60.120.10coord: 17..200
score: 4.6
IPR019780Germin, manganese binding sitePROSITEPS00725GERMINcoord: 92..105
scor
NoneNo IPR availablePANTHERPTHR31238FAMILY NOT NAMEDcoord: 1..200
score: 1.7E
NoneNo IPR availablePANTHERPTHR31238:SF8SUBFAMILY NOT NAMEDcoord: 1..200
score: 1.7E

The following gene(s) are paralogous to this gene:

None