CmoCh04G014700 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTACCACCGGGACTATCGGTTTGGTGCTCTTGGTTTTGTTAATGGCGGACTTAACTCTTGCTGCTAGATTCCTAAGGGGGTACGGAGGTGGTGGTGGGGGTGGTAGTGGTGGGGGTGGAGGTGGCGGAGAAGGTTCAAGACCTTGGTCAGGTTCGGGATATGGTTCGGGGTATGGCTCTGGGTATGGTTCGGGATATGGCGATGGTGGCTATCCTAGATATGGAGATGAAGGGTATGGGCCATATGGGCCATATGGGAGTGGTGGAGGTGGAGGGGGAGGAGGTGGTGGTGGGGGAGGAGGCGGCGGTGCAAATGGAGCCGGGTATGGTCACGGGTTTGGATCGGGAAGTGGGTCAGGGTATGGGTCTGGTGGCGGAGTAGGACGTGGCGGAGGAGGTGGTGGAGGAGGTGGCAGAGGTGGAGGAGGAGGAGGTGGCGGCGGAGGAGGCGGCGGGGGCGGAGAAGGAATGGGAGGAGGGTCCGGATATGGTTCGGGATATGGGTCGGGATATGGAGGAGGCGGGGATTAA ATGGCTACCACCGGGACTATCGGTTTGGTGCTCTTGGTTTTGTTAATGGCGGACTTAACTCTTGCTGCTAGATTCCTAAGGGGGTACGGAGGTGGTGGTGGGGGTGGTAGTGGTGGGGGTGGAGGTGGCGGAGAAGGTTCAAGACCTTGGTCAGGTTCGGGATATGGTTCGGGGTATGGCTCTGGGTATGGTTCGGGATATGGCGATGGTGGCTATCCTAGATATGGAGATGAAGGGTATGGGCCATATGGGCCATATGGGAGTGGTGGAGGTGGAGGGGGAGGAGGTGGTGGTGGGGGAGGAGGCGGCGGTGCAAATGGAGCCGGGTATGGTCACGGGTTTGGATCGGGAAGTGGGTCAGGGTATGGGTCTGGTGGCGGAGTAGGACGTGGCGGAGGAGGTGGTGGAGGAGGTGGCAGAGGTGGAGGAGGAGGAGGTGGCGGCGGAGGAGGCGGCGGGGGCGGAGAAGGAATGGGAGGAGGGTCCGGATATGGTTCGGGATATGGGTCGGGATATGGAGGAGGCGGGGATTAA ATGGCTACCACCGGGACTATCGGTTTGGTGCTCTTGGTTTTGTTAATGGCGGACTTAACTCTTGCTGCTAGATTCCTAAGGGGGTACGGAGGTGGTGGTGGGGGTGGTAGTGGTGGGGGTGGAGGTGGCGGAGAAGGTTCAAGACCTTGGTCAGGTTCGGGATATGGTTCGGGGTATGGCTCTGGGTATGGTTCGGGATATGGCGATGGTGGCTATCCTAGATATGGAGATGAAGGGTATGGGCCATATGGGCCATATGGGAGTGGTGGAGGTGGAGGGGGAGGAGGTGGTGGTGGGGGAGGAGGCGGCGGTGCAAATGGAGCCGGGTATGGTCACGGGTTTGGATCGGGAAGTGGGTCAGGGTATGGGTCTGGTGGCGGAGTAGGACGTGGCGGAGGAGGTGGTGGAGGAGGTGGCAGAGGTGGAGGAGGAGGAGGTGGCGGCGGAGGAGGCGGCGGGGGCGGAGAAGGAATGGGAGGAGGGTCCGGATATGGTTCGGGATATGGGTCGGGATATGGAGGAGGCGGGGATTAA
BLAST of CmoCh04G014700 vs. TrEMBL
Match: A0A0A0KUV7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G622440 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 1.9e-27 Identity = 151/202 (74.75%), Postives = 154/202 (76.24%), Query Frame = 1
BLAST of CmoCh04G014700 vs. TrEMBL
Match: A0A067L9H4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01572 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 7.6e-08 Identity = 118/179 (65.92%), Postives = 127/179 (70.95%), Query Frame = 1
BLAST of CmoCh04G014700 vs. TrEMBL
Match: U5G1M4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s03090g PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.1e-06 Identity = 115/175 (65.71%), Postives = 120/175 (68.57%), Query Frame = 1
BLAST of CmoCh04G014700 vs. TrEMBL
Match: U5G589_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s23700g PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.4e-06 Identity = 109/175 (62.29%), Postives = 119/175 (68.00%), Query Frame = 1
BLAST of CmoCh04G014700 vs. TrEMBL
Match: A0A061FQB6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_043372 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 4.2e-06 Identity = 117/180 (65.00%), Postives = 122/180 (67.78%), Query Frame = 1
BLAST of CmoCh04G014700 vs. NCBI nr
Match: gi|700197050|gb|KGN52227.1| (hypothetical protein Csa_5G622440 [Cucumis sativus]) HSP 1 Score: 130.6 bits (327), Expect = 2.8e-27 Identity = 151/202 (74.75%), Postives = 154/202 (76.24%), Query Frame = 1
BLAST of CmoCh04G014700 vs. NCBI nr
Match: gi|778708700|ref|XP_011656265.1| (PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis sativus]) HSP 1 Score: 126.7 bits (317), Expect = 4.0e-26 Identity = 148/191 (77.49%), Postives = 151/191 (79.06%), Query Frame = 1
BLAST of CmoCh04G014700 vs. NCBI nr
Match: gi|659092334|ref|XP_008447018.1| (PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo]) HSP 1 Score: 124.8 bits (312), Expect = 1.5e-25 Identity = 150/213 (70.42%), Postives = 153/213 (71.83%), Query Frame = 1
BLAST of CmoCh04G014700 vs. NCBI nr
Match: gi|802547508|ref|XP_012090469.1| (PREDICTED: glycine-rich cell wall structural protein 2-like [Jatropha curcas]) HSP 1 Score: 71.6 bits (174), Expect = 1.5e-09 Identity = 118/181 (65.19%), Postives = 127/181 (70.17%), Query Frame = 1
BLAST of CmoCh04G014700 vs. NCBI nr
Match: gi|1012241822|ref|XP_015941100.1| (PREDICTED: putative glycine-rich cell wall structural protein 1 [Arachis duranensis]) HSP 1 Score: 68.2 bits (165), Expect = 1.7e-08 Identity = 117/182 (64.29%), Postives = 129/182 (70.88%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |