CmoCh04G014460 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G014460
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionKinesin like protein
LocationCmo_Chr04 : 7411518 .. 7412723 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCAGCACTGAGGCAGGAATGGGTCAGTCTACAGAACAAAAGAAGAGTGTTTCTGCCAACAATGCAGCTCGGTCGTCTCCATCCATGTTTAGAAGATGGGGTAGAAGACACCCATTTATCAGATATGGACTTCCAATGATCTCTCTCACTGTGCTTGGGGCAGTTGGTCTTGGCCATCTCTTGCAAGGAAGGTTAGTGGTTGCTGGTACTGTTTGAAGTTTATGATTCAAAGTGATGGTGTTGCCTTCTTTAGGAGATCACTTTAATTTTCCTGTTCTGGATTTGTGATGCCTCGATGTATAACCCTGGAAAACCTGTTTTAAAATACATCGGAAAGATTCTGGACTTTGCCTTGGAAGTGGTCATCGAGTCCATGGAATTGAGATTTGAGAACCGATGCGAAAATGCTTCGAGAATGAAAATTCTGTGTGCAGTCGATTAATACCTTTCCTGGTGCTCTATTTCATATCTTGGAAAGTTCTATTTGGAGTAGACTGTTAATTAGCTATCTGCACAGCAACACTATAAATATTATCAAGATCATATTTGTTGTAATGTTTCCATGTTTGCTTTTCCATTTGATATTCAAACGTGTCGAATTTGCATTGTAGTTCAGTAAAGATATTGCAAAGGTGAAAGATGATCAAGAATGGGAGATCACTGAGATGAGAAAAGCCCTGTCAAGAACGGGACCTATTGACGCGTATAAGCCGAAAAATATATCGTTAGAAGAAGAACTGAGGGTATTACTCTTATTCATTGCAACTCATTTGTTATGATGTTCAGATTCATCATCATATACAGCGCCTGATTGTGTTATTGATGTGTTCAGGCTTTACAAGAGAAGGTAGACATCAACAACTATGAATACAAGAGAATTCCAAAGCCCACTGATCGAACATCCTGAAATTTAGCCCTCCAAAAGTTGCATACAACACCAGTTCAGGTATTTTGTATCCTCACTTGTAATTCCTTTTGAAGATTATGACAATAAACATCCTTTTCGAATGAGCAAAATGTTCCCTTTTTTGAGTTTTGTTTCAACCTTTTGGAATTTTTTATGCTCATCTTTTCTCTACATATTGCTGTGACCTCTTTGTTTCAACCTTTTTATGCTTATTTATTTAATTGTTTTTTTGTAAAAAAAATTATTGTTTTTAATTTTAGAAACGATAATAAAATTGTGACTTTGGGGCGTCTACC

mRNA sequence

ATGACCAGCACTGAGGCAGGAATGGGTCAGTCTACAGAACAAAAGAAGAGTGTTTCTGCCAACAATGCAGCTCGGTCGTCTCCATCCATGTTTAGAAGATGGGGTAGAAGACACCCATTTATCAGATATGGACTTCCAATGATCTCTCTCACTGTGCTTGGGGCAGTTGGTCTTGGCCATCTCTTGCAAGGAAGTAAAGATATTGCAAAGGTGAAAGATGATCAAGAATGGGAGATCACTGAGATGAGAAAAGCCCTGTCAAGAACGGGACCTATTGACGCGTATAAGCCGAAAAATATATCGTTAGAAGAAGAACTGAGGGCTTTACAAGAGAAGGTAGACATCAACAACTATGAATACAAGAGAATTCCAAAGCCCACTGATCGAACATCCTGAAATTTAGCCCTCCAAAAGTTGCATACAACACCAGTTCAGGTATTTTGTATCCTCACTTGTAATTCCTTTTGAAGATTATGACAATAAACATCCTTTTCGAATGAGCAAAATGTTCCCTTTTTTGAGTTTTGTTTCAACCTTTTGGAATTTTTTATGCTCATCTTTTCTCTACATATTGCTGTGACCTCTTTGTTTCAACCTTTTTATGCTTATTTATTTAATTGTTTTTTTGTAAAAAAAATTATTGTTTTTAATTTTAGAAACGATAATAAAATTGTGACTTTGGGGCGTCTACC

Coding sequence (CDS)

ATGACCAGCACTGAGGCAGGAATGGGTCAGTCTACAGAACAAAAGAAGAGTGTTTCTGCCAACAATGCAGCTCGGTCGTCTCCATCCATGTTTAGAAGATGGGGTAGAAGACACCCATTTATCAGATATGGACTTCCAATGATCTCTCTCACTGTGCTTGGGGCAGTTGGTCTTGGCCATCTCTTGCAAGGAAGTAAAGATATTGCAAAGGTGAAAGATGATCAAGAATGGGAGATCACTGAGATGAGAAAAGCCCTGTCAAGAACGGGACCTATTGACGCGTATAAGCCGAAAAATATATCGTTAGAAGAAGAACTGAGGGCTTTACAAGAGAAGGTAGACATCAACAACTATGAATACAAGAGAATTCCAAAGCCCACTGATCGAACATCCTGA
BLAST of CmoCh04G014460 vs. TrEMBL
Match: A0A067DTX0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032814mg PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 5.6e-48
Identity = 96/128 (75.00%), Postives = 111/128 (86.72%), Query Frame = 1

Query: 4   TEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQ 63
           T+  M QS ++ K+VS  ++   +PS F+RWGR+HPF+RYGLPMISLTV GA+GLGHLLQ
Sbjct: 6   TQTAMSQS-DKPKNVSTKSSKAQTPSPFKRWGRKHPFVRYGLPMISLTVFGAIGLGHLLQ 65

Query: 64  GSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRI 123
           GSKDIAKVKDDQEWEI E RKALSRTGP+DAYKPKNISLEEEL+ALQEKVDINNYEYKRI
Sbjct: 66  GSKDIAKVKDDQEWEIIEARKALSRTGPVDAYKPKNISLEEELKALQEKVDINNYEYKRI 125

Query: 124 PKPTDRTS 132
           P+P +  S
Sbjct: 126 PRPNEGKS 132

BLAST of CmoCh04G014460 vs. TrEMBL
Match: V4TIW5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033053mg PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.2e-47
Identity = 96/128 (75.00%), Postives = 111/128 (86.72%), Query Frame = 1

Query: 4   TEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQ 63
           T+  M QS ++ K+VS  ++   +PS F+RWGR+HPF+RYGLPMISLTV GA+GLGHLLQ
Sbjct: 6   TQTVMSQS-DKPKNVSTKSSKAQTPSPFKRWGRKHPFVRYGLPMISLTVFGAIGLGHLLQ 65

Query: 64  GSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRI 123
           GSKDIAKVKDDQEWEI E RKALSRTGP+DAYKPKNISLEEEL+ALQEKVDINNYEYKRI
Sbjct: 66  GSKDIAKVKDDQEWEIIEARKALSRTGPVDAYKPKNISLEEELKALQEKVDINNYEYKRI 125

Query: 124 PKPTDRTS 132
           P+P +  S
Sbjct: 126 PRPNEGKS 132

BLAST of CmoCh04G014460 vs. TrEMBL
Match: A0A067LJC4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20059 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.4e-46
Identity = 96/131 (73.28%), Postives = 109/131 (83.21%), Query Frame = 1

Query: 1   MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGH 60
           MT+ E  MGQ  +   + +A    +SS S F+RWGR+HPF+RYGLPMISLTV GA+GLGH
Sbjct: 1   MTTLETQMGQPQKISVAAAATAKIQSSTSSFKRWGRKHPFVRYGLPMISLTVFGALGLGH 60

Query: 61  LLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEY 120
           LLQGSKDIAKVKDDQEWEI E RKALSRTGPIDAY+PK ISLEEEL+ALQ+KVDINNYEY
Sbjct: 61  LLQGSKDIAKVKDDQEWEIIETRKALSRTGPIDAYQPKRISLEEELKALQQKVDINNYEY 120

Query: 121 KRIPKPTDRTS 132
           KRIPKP +  S
Sbjct: 121 KRIPKPNEGKS 131

BLAST of CmoCh04G014460 vs. TrEMBL
Match: B9T7C5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0092820 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 6.8e-46
Identity = 91/111 (81.98%), Postives = 100/111 (90.09%), Query Frame = 1

Query: 18  VSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEW 77
           + A N  +SS S F+RWGRRHPF+RYGLPMISLTV GAVGLGHLLQGSKDIAKVKDDQEW
Sbjct: 1   MGATNKIQSSTSSFKRWGRRHPFVRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEW 60

Query: 78  EITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRIPKPTD 129
           EI E RKALSRTGP++AYKPK ISLEEEL+ALQ+KVDI+NYEYKRIPKP D
Sbjct: 61  EIIETRKALSRTGPLEAYKPKKISLEEELKALQQKVDIDNYEYKRIPKPND 111

BLAST of CmoCh04G014460 vs. TrEMBL
Match: A0A0D2VD00_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G205700 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.0e-45
Identity = 95/131 (72.52%), Postives = 105/131 (80.15%), Query Frame = 1

Query: 1   MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGH 60
           MTS E    +  +     +     +SS S FRRWGR++PFIRYGLPMISLTV GAVGLGH
Sbjct: 1   MTSVEGNTAEPRKTSNPAANTAKIQSSSSSFRRWGRKYPFIRYGLPMISLTVFGAVGLGH 60

Query: 61  LLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEY 120
           LLQGSKDIAKVKDDQEWEI E RKALSRTGPIDAYKPK ISLEEEL+ALQ+KVDINNY+Y
Sbjct: 61  LLQGSKDIAKVKDDQEWEIIETRKALSRTGPIDAYKPKKISLEEELKALQQKVDINNYDY 120

Query: 121 KRIPKPTDRTS 132
           KRIPKP +  S
Sbjct: 121 KRIPKPNEGNS 131

BLAST of CmoCh04G014460 vs. TAIR10
Match: AT4G14145.1 (AT4G14145.1 unknown protein)

HSP 1 Score: 176.0 bits (445), Expect = 1.5e-44
Identity = 87/133 (65.41%), Postives = 103/133 (77.44%), Query Frame = 1

Query: 1   MTSTEAGMG--QSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGL 60
           MT+ E G    +S+      +     + S + F+RWGRRHPF+RYGLPMISLTV GA+GL
Sbjct: 1   MTTIETGQKTQKSSPSGSGTTPTGTLKQSSASFKRWGRRHPFVRYGLPMISLTVFGALGL 60

Query: 61  GHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNY 120
           G LLQGSKDIAKVKDDQEWEI E RKALSRTGP+DAYKPKN S+E+EL+A+QEKVDIN Y
Sbjct: 61  GQLLQGSKDIAKVKDDQEWEIIETRKALSRTGPVDAYKPKNTSIEDELKAMQEKVDINTY 120

Query: 121 EYKRIPKPTDRTS 132
           EYK+IPK  +  S
Sbjct: 121 EYKKIPKLNESKS 133

BLAST of CmoCh04G014460 vs. NCBI nr
Match: gi|659092049|ref|XP_008446874.1| (PREDICTED: uncharacterized protein LOC103489460 isoform X1 [Cucumis melo])

HSP 1 Score: 244.6 bits (623), Expect = 9.7e-62
Identity = 122/131 (93.13%), Postives = 128/131 (97.71%), Query Frame = 1

Query: 1   MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGH 60
           MTSTEAGMG+STE KK  SA+NAAR+SPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGH
Sbjct: 1   MTSTEAGMGESTEPKKISSASNAARASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGH 60

Query: 61  LLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEY 120
           LLQGSKDIAKVKDDQEWEITEMR+ALSRTGPIDAYKPKNISLEEELRALQE+VDINNYEY
Sbjct: 61  LLQGSKDIAKVKDDQEWEITEMREALSRTGPIDAYKPKNISLEEELRALQEQVDINNYEY 120

Query: 121 KRIPKPTDRTS 132
           KRIP+PTDRTS
Sbjct: 121 KRIPRPTDRTS 131

BLAST of CmoCh04G014460 vs. NCBI nr
Match: gi|449449368|ref|XP_004142437.1| (PREDICTED: uncharacterized protein LOC101208712 [Cucumis sativus])

HSP 1 Score: 243.8 bits (621), Expect = 1.7e-61
Identity = 122/131 (93.13%), Postives = 126/131 (96.18%), Query Frame = 1

Query: 1   MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGH 60
           MTSTEAGMGQS E KK  SA+NA R+SPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGH
Sbjct: 1   MTSTEAGMGQSAEPKKISSASNATRASPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGH 60

Query: 61  LLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEY 120
           LLQGSKDIAKVKDDQEWEITEMR+ALSRTGPIDAYKPKNISLEEELRALQ+KVDINNYEY
Sbjct: 61  LLQGSKDIAKVKDDQEWEITEMREALSRTGPIDAYKPKNISLEEELRALQQKVDINNYEY 120

Query: 121 KRIPKPTDRTS 132
           KRIPKPTDRTS
Sbjct: 121 KRIPKPTDRTS 131

BLAST of CmoCh04G014460 vs. NCBI nr
Match: gi|641827052|gb|KDO46253.1| (hypothetical protein CISIN_1g032814mg [Citrus sinensis])

HSP 1 Score: 198.4 bits (503), Expect = 8.0e-48
Identity = 96/128 (75.00%), Postives = 111/128 (86.72%), Query Frame = 1

Query: 4   TEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQ 63
           T+  M QS ++ K+VS  ++   +PS F+RWGR+HPF+RYGLPMISLTV GA+GLGHLLQ
Sbjct: 6   TQTAMSQS-DKPKNVSTKSSKAQTPSPFKRWGRKHPFVRYGLPMISLTVFGAIGLGHLLQ 65

Query: 64  GSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRI 123
           GSKDIAKVKDDQEWEI E RKALSRTGP+DAYKPKNISLEEEL+ALQEKVDINNYEYKRI
Sbjct: 66  GSKDIAKVKDDQEWEIIEARKALSRTGPVDAYKPKNISLEEELKALQEKVDINNYEYKRI 125

Query: 124 PKPTDRTS 132
           P+P +  S
Sbjct: 126 PRPNEGKS 132

BLAST of CmoCh04G014460 vs. NCBI nr
Match: gi|567887838|ref|XP_006436441.1| (hypothetical protein CICLE_v10033053mg [Citrus clementina])

HSP 1 Score: 197.2 bits (500), Expect = 1.8e-47
Identity = 96/128 (75.00%), Postives = 111/128 (86.72%), Query Frame = 1

Query: 4   TEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQ 63
           T+  M QS ++ K+VS  ++   +PS F+RWGR+HPF+RYGLPMISLTV GA+GLGHLLQ
Sbjct: 6   TQTVMSQS-DKPKNVSTKSSKAQTPSPFKRWGRKHPFVRYGLPMISLTVFGAIGLGHLLQ 65

Query: 64  GSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEYKRI 123
           GSKDIAKVKDDQEWEI E RKALSRTGP+DAYKPKNISLEEEL+ALQEKVDINNYEYKRI
Sbjct: 66  GSKDIAKVKDDQEWEIIEARKALSRTGPVDAYKPKNISLEEELKALQEKVDINNYEYKRI 125

Query: 124 PKPTDRTS 132
           P+P +  S
Sbjct: 126 PRPNEGKS 132

BLAST of CmoCh04G014460 vs. NCBI nr
Match: gi|802550970|ref|XP_012093271.1| (PREDICTED: uncharacterized protein LOC105650916 [Jatropha curcas])

HSP 1 Score: 193.7 bits (491), Expect = 2.0e-46
Identity = 96/131 (73.28%), Postives = 109/131 (83.21%), Query Frame = 1

Query: 1   MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGH 60
           MT+ E  MGQ  +   + +A    +SS S F+RWGR+HPF+RYGLPMISLTV GA+GLGH
Sbjct: 1   MTTLETQMGQPQKISVAAAATAKIQSSTSSFKRWGRKHPFVRYGLPMISLTVFGALGLGH 60

Query: 61  LLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDINNYEY 120
           LLQGSKDIAKVKDDQEWEI E RKALSRTGPIDAY+PK ISLEEEL+ALQ+KVDINNYEY
Sbjct: 61  LLQGSKDIAKVKDDQEWEIIETRKALSRTGPIDAYQPKRISLEEELKALQQKVDINNYEY 120

Query: 121 KRIPKPTDRTS 132
           KRIPKP +  S
Sbjct: 121 KRIPKPNEGKS 131

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A067DTX0_CITSI5.6e-4875.00Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032814mg PE=4 SV=1[more]
V4TIW5_9ROSI1.2e-4775.00Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033053mg PE=4 SV=1[more]
A0A067LJC4_JATCU1.4e-4673.28Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20059 PE=4 SV=1[more]
B9T7C5_RICCO6.8e-4681.98Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0092820 PE=4 SV=1[more]
A0A0D2VD00_GOSRA2.0e-4572.52Uncharacterized protein OS=Gossypium raimondii GN=B456_010G205700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G14145.11.5e-4465.41 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659092049|ref|XP_008446874.1|9.7e-6293.13PREDICTED: uncharacterized protein LOC103489460 isoform X1 [Cucumis melo][more]
gi|449449368|ref|XP_004142437.1|1.7e-6193.13PREDICTED: uncharacterized protein LOC101208712 [Cucumis sativus][more]
gi|641827052|gb|KDO46253.1|8.0e-4875.00hypothetical protein CISIN_1g032814mg [Citrus sinensis][more]
gi|567887838|ref|XP_006436441.1|1.8e-4775.00hypothetical protein CICLE_v10033053mg [Citrus clementina][more]
gi|802550970|ref|XP_012093271.1|2.0e-4673.28PREDICTED: uncharacterized protein LOC105650916 [Jatropha curcas][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR020164Cyt_c_Oxase_assmbl_COX16
Vocabulary: Cellular Component
TermDefinition
GO:0031966mitochondrial membrane
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0031966 mitochondrial membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G014460.1CmoCh04G014460.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020164Cytochrome c oxidase assembly protein COX16PRODOMPD076120coord: 36..126
score: 0
IPR020164Cytochrome c oxidase assembly protein COX16PFAMPF14138COX16coord: 41..127
score: 8.6
NoneNo IPR availablePANTHERPTHR17130MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25coord: 1..128
score: 6.3
NoneNo IPR availablePANTHERPTHR17130:SF23SUBFAMILY NOT NAMEDcoord: 1..128
score: 6.3

The following gene(s) are paralogous to this gene:

None