CmoCh04G013580 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G013580
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionMitochondrial transcription termination factor family protein, putative
LocationCmo_Chr04 : 6926817 .. 6927938 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAAAATTTCCTCGACATTTTTGCTCTATTTCATCCAAAATCGGTTCATCAATACGGTTTCTGGTTCTACATTGCCTCTAGCGTCTGTGTCTACGATTGAATTCCTCAAGAACTCTTGTGGGCTTGCTACGGATTCTCCTTCTTCCGCCCTTCGAAAGCTCCAATTCGATGAAAAAAGCGCCAAGAAGTACGAAGCCGTTCTTGGTTTCTTGAAATCATATGGATTCGAGAATTCGCAGATCGCCAAGTTGATCGCGAAGCGATCTTCAATCCTTCAATCGAGAGTCTCCAGCAATCTGAAGCCTAAATTTGAGTTCCTCGAGGAAATTGGGTTCGTCGGCCCTTTACTTCCAAAGGTAATTTTATCGAACCCCGCTATTCTGCAGAGGGGCTTAGATTCTCATTTGAAACCATCGTTTTGTTTCATTAAGGAAATGCTTGAATCGGATGAGCAGGCTAATTTTGCTATTCGTCGATCTTCGTGGCTTCTAACTTCTAATTTTAAGGGTGTTATGCAATCTAACGTTAATGTGTTGCTCGGTGAAGGGGTACCTTCTAGGAATATATCGAAATTGATTGCGCAGCAACCAAGAACTATTATGCAAAAGGTTGATAGAATGGTTTGTGCAGTGAAGAAGGTCAAGGAATTGGGCATTGAACCACAGACTCGTATGTTTGTTCGTGCGCTTCGTGTAGTGTTGTCCATGAATGACACAACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTGGGATGGTCTGAGAAGGAGATTTTAACAGCATTTAAGAGAGACCCATATTGTTTAGCTTGTTCAGAGGAGAAAATGAGGGCTGTTGCAGATTTCTGTTTCAACGCTGCAAAATTGGACCCAGAAACTGTAATTTCTTACCCCACGTTCTTCATGTCTGGACTGGACAAGCGTCTCCGGCCAAGGTTCAAAGTTGTTGAGGTTTTGAAGGTAAAAAAACTGATTGAGAACAGAAAGATTGCTCGGTTGCTTGTTGTAGGGGAAAGAATTTTTGTGAAGAATTATGTTCTTAAGCATTTGGATGAAGTCCCAGATCTTATGGAGATATACAGGGGCAATGCCACAGCCGAAGCCAGACCTGTTCTATAG

mRNA sequence

ATGTCTAAAATTTCCTCGACATTTTTGCTCTATTTCATCCAAAATCGGTTCATCAATACGGTTTCTGGTTCTACATTGCCTCTAGCGTCTGTGTCTACGATTGAATTCCTCAAGAACTCTTGTGGGCTTGCTACGGATTCTCCTTCTTCCGCCCTTCGAAAGCTCCAATTCGATGAAAAAAGCGCCAAGAAGTACGAAGCCGTTCTTGGTTTCTTGAAATCATATGGATTCGAGAATTCGCAGATCGCCAAGTTGATCGCGAAGCGATCTTCAATCCTTCAATCGAGAGTCTCCAGCAATCTGAAGCCTAAATTTGAGTTCCTCGAGGAAATTGGGTTCGTCGGCCCTTTACTTCCAAAGGTAATTTTATCGAACCCCGCTATTCTGCAGAGGGGCTTAGATTCTCATTTGAAACCATCGTTTTGTTTCATTAAGGAAATGCTTGAATCGGATGAGCAGGCTAATTTTGCTATTCGTCGATCTTCGTGGCTTCTAACTTCTAATTTTAAGGGTGTTATGCAATCTAACGTTAATGTGTTGCTCGGTGAAGGGGTACCTTCTAGGAATATATCGAAATTGATTGCGCAGCAACCAAGAACTATTATGCAAAAGGTTGATAGAATGGTTTGTGCAGTGAAGAAGGTCAAGGAATTGGGCATTGAACCACAGACTCGTATGTTTGTTCGTGCGCTTCGTGTAGTGTTGTCCATGAATGACACAACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTGGGATGGTCTGAGAAGGAGATTTTAACAGCATTTAAGAGAGACCCATATTGTTTAGCTTGTTCAGAGGAGAAAATGAGGGCTGTTGCAGATTTCTGTTTCAACGCTGCAAAATTGGACCCAGAAACTGTAATTTCTTACCCCACGTTCTTCATGTCTGGACTGGACAAGCGTCTCCGGCCAAGGTTCAAAGTTGTTGAGGTTTTGAAGGTAAAAAAACTGATTGAGAACAGAAAGATTGCTCGGTTGCTTGTTGTAGGGGAAAGAATTTTTGTGAAGAATTATGTTCTTAAGCATTTGGATGAAGTCCCAGATCTTATGGAGATATACAGGGGCAATGCCACAGCCGAAGCCAGACCTGTTCTATAG

Coding sequence (CDS)

ATGTCTAAAATTTCCTCGACATTTTTGCTCTATTTCATCCAAAATCGGTTCATCAATACGGTTTCTGGTTCTACATTGCCTCTAGCGTCTGTGTCTACGATTGAATTCCTCAAGAACTCTTGTGGGCTTGCTACGGATTCTCCTTCTTCCGCCCTTCGAAAGCTCCAATTCGATGAAAAAAGCGCCAAGAAGTACGAAGCCGTTCTTGGTTTCTTGAAATCATATGGATTCGAGAATTCGCAGATCGCCAAGTTGATCGCGAAGCGATCTTCAATCCTTCAATCGAGAGTCTCCAGCAATCTGAAGCCTAAATTTGAGTTCCTCGAGGAAATTGGGTTCGTCGGCCCTTTACTTCCAAAGGTAATTTTATCGAACCCCGCTATTCTGCAGAGGGGCTTAGATTCTCATTTGAAACCATCGTTTTGTTTCATTAAGGAAATGCTTGAATCGGATGAGCAGGCTAATTTTGCTATTCGTCGATCTTCGTGGCTTCTAACTTCTAATTTTAAGGGTGTTATGCAATCTAACGTTAATGTGTTGCTCGGTGAAGGGGTACCTTCTAGGAATATATCGAAATTGATTGCGCAGCAACCAAGAACTATTATGCAAAAGGTTGATAGAATGGTTTGTGCAGTGAAGAAGGTCAAGGAATTGGGCATTGAACCACAGACTCGTATGTTTGTTCGTGCGCTTCGTGTAGTGTTGTCCATGAATGACACAACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTGGGATGGTCTGAGAAGGAGATTTTAACAGCATTTAAGAGAGACCCATATTGTTTAGCTTGTTCAGAGGAGAAAATGAGGGCTGTTGCAGATTTCTGTTTCAACGCTGCAAAATTGGACCCAGAAACTGTAATTTCTTACCCCACGTTCTTCATGTCTGGACTGGACAAGCGTCTCCGGCCAAGGTTCAAAGTTGTTGAGGTTTTGAAGGTAAAAAAACTGATTGAGAACAGAAAGATTGCTCGGTTGCTTGTTGTAGGGGAAAGAATTTTTGTGAAGAATTATGTTCTTAAGCATTTGGATGAAGTCCCAGATCTTATGGAGATATACAGGGGCAATGCCACAGCCGAAGCCAGACCTGTTCTATAG
Homology
[Close]
BLAST of CmoCh04G013580 vs. TrEMBL
Match: A0A067L028_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24592 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 6.6e-94
Identity = 187/374 (50.00%), Postives = 256/374 (68.45%), Query Frame = 1 

Query: 9   LLYFIQNRFINTVSGSTL----PLASVS-------TIEFLKNSCGLATDSPSSALRKLQF 68
           L + IQ RF+N  +   L    PL + S       T++FL  SCGL   S  S  R LQ 
Sbjct: 9   LFFHIQKRFLNASATGKLSPRSPLPTTSNSSSSTFTVQFLVKSCGLPLKSARSVSRTLQL 68

Query: 69  DEKSAKKYEAVLGFLKSYGFENSQIAKLIAKRSSILQSRVSSNLKPKFEFLEEIGFVGPL 128
           DEK+ ++Y++V+  LKS+ F  +Q+AKLI K+ +ILQ RV +NL PKF +L+E GF G L
Sbjct: 69  DEKNQQRYQSVMELLKSHNFSGTQVAKLIVKKPAILQCRVENNLFPKFNYLKENGFAGEL 128

Query: 129 LPKVILSNPAILQRGLDSHLKPSFCFIKEMLESDEQANFAIRRSSWLLTSNFKGVMQSNV 188
           LP++ LSNP I+QR L+SH+KP+F F++ +L+SD++   AIRRSSWLLTS+ KG MQ N+
Sbjct: 129 LPELFLSNPVIIQRALNSHIKPTFDFLRSVLDSDDKVVAAIRRSSWLLTSDLKGRMQPNI 188

Query: 189 NVLLGEGVPSRNISKLIAQQPRTIMQKVDRMVCAVKKVKELGIEPQTRMFVRALRVVLSM 248
           ++L+  GVP+ +I K++  QPR I Q  DRMV AV  V  LGI+P  R FV A+RV++SM
Sbjct: 189 DLLVKVGVPAHSIEKIVILQPRVISQNHDRMVHAVHAVNNLGIQPTARRFVHAVRVMMSM 248

Query: 249 NDTTWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCFNAAKLDPETVIS 308
           +D TWKKK  +LK++GWSE+EI +AFK+ P+ LA SEEK +   DF  N  KL P+T+I+
Sbjct: 249 SDFTWKKKFELLKNVGWSEEEIFSAFKKKPHFLASSEEKFKNAMDFYLNTMKLQPQTLIA 308

Query: 309 YPTFFMSGLDKRLRPRFKVVEVLKVKKLIENR-KIARLLVVGERIFVKNYVLKHLDEVPD 368
            P F M  +DKRLRPR+ V++ L+ KKLIE R KI  LL++ E+ F KN+V K+  EVP 
Sbjct: 309 SPIFLMHSVDKRLRPRYNVLQALESKKLIEGRKKIEWLLLISEKNFQKNFVSKYAAEVPG 368

Query: 369 LMEIYRGNATAEAR 371
           L+E+Y G   A  R
Sbjct: 369 LLEMYLGTRNATKR 382

[Close]
BLAST of CmoCh04G013580 vs. TrEMBL
Match: M5XTI6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021790mg PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 2.6e-90
Identity = 179/358 (50.00%), Postives = 248/358 (69.27%), Query Frame = 1 

Query: 9   LLYFIQNRFINTVSGSTLPLASVSTIEFLKNSCGLATDSPSSALRKLQFDEKSAKKYEAV 68
           LL  +Q R + T+   T  L S  T+E+L  SCGL  +S  SA +KLQ D+K   + +++
Sbjct: 9   LLSLVQKRLLATLPTPTAALCSSFTVEYLVKSCGLPLESAISASKKLQIDKKQTHRIDSM 68

Query: 69  LGFLKSYGFENSQIAKLIAKRSSILQSRVSSNLKPKFEFLEEIGFVGPLLPKVILSNPAI 128
           L FLKS GF+++QIAKLI KR +IL  +V SNL+PKF FL E GFVG  LP+++L NP I
Sbjct: 69  LKFLKSNGFDDAQIAKLITKRPTILHYKVLSNLEPKFNFLIENGFVGQNLPELVLLNPVI 128

Query: 129 LQRGLDSHLKPSFCFIKEMLESDEQANFAIRRSSWLLTSNFKGVMQSNVNVLLGEGVPSR 188
           L R LDSH+KP+  F+K++L +++    A +RSSWLL  +  G +Q NV +L  EGVP  
Sbjct: 129 LTRSLDSHIKPAVQFLKKLLSTNDMLA-AAKRSSWLLNMDSVGTIQPNVALLQSEGVPLD 188

Query: 189 NISKLIAQQPRTIMQKVDRMVCAVKKVKELGIEPQTRMFVRALRVVLSMNDTTWKKKINV 248
            I+K+I  QPRT+MQ VDRM  AV+ +K+LGI+P   MFVRA+RV++SM ++TWK+KI  
Sbjct: 189 VITKMILFQPRTVMQNVDRMAYAVRTIKDLGIDPTGPMFVRAVRVMISMKESTWKRKIEF 248

Query: 249 LKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCFNAAKLDPETVISYPTFFMSGLDK 308
            KS GWSE  +L+ FKR P+CLACSEEK+  V DF  N  KL+PET+I+ P   M G +K
Sbjct: 249 FKSYGWSEDVVLSVFKRQPFCLACSEEKLGRVMDFFLNTVKLEPETMIANPMLLMHGFEK 308

Query: 309 RLRPRFKVVEVLKVKKLI--ENRKIARLLVVGERIFVKNYVLKHLDEVPDLMEIYRGN 365
            + PR+ V ++L  K+LI  +N+++  L+   ER F+  YVLK+L+EVPDL+EIY  +
Sbjct: 309 TVLPRYNVFKILVSKELINRDNKRLCWLITQSERRFLDYYVLKYLNEVPDLLEIYHSS 365

[Close]
BLAST of CmoCh04G013580 vs. TrEMBL
Match: B9GLU5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s07200g PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 4.4e-90
Identity = 182/375 (48.53%), Postives = 256/375 (68.27%), Query Frame = 1 

Query: 2   SKISSTFLLYFIQNRFINTVSGSTLPLASVST-------IEFLKNSCGLATDSPSSALRK 61
           +K++   LL  +Q RF++T S ST  L+ +ST       ++FL NSCGL + S  S  +K
Sbjct: 3   TKVAMRNLLPLLQKRFLSTSSSSTPTLSPLSTAPSSSFTVDFLINSCGLPSKSALSVSQK 62

Query: 62  LQFDEKSAKKYEAVLGFLKSYGFENSQIAKLIAKRSSILQSRVSSNLKPKFEFLEEIGFV 121
           LQ DEKS +K ++VL FLK++GF+ + + KLI KR  +L+  V +NLKPKFEFL   GFV
Sbjct: 63  LQLDEKSIQKPQSVLEFLKAHGFKETHVVKLIEKRPDVLRRGVDTNLKPKFEFLIANGFV 122

Query: 122 GPLLPKVILSNPAILQRGLDSHLKPSFCFIKEMLESDEQANFAIRRSSWLLTSNFKGVMQ 181
           G LLP++I SNP +L+R L+S++KP F + K +L S++    A +R +  LT ++K ++Q
Sbjct: 123 GKLLPELITSNPNVLERALESNMKPCFEYFKSILGSNDMIVAASKRCAVFLTYDWKSIIQ 182

Query: 182 SNVNVLLGEGVPSRNISKLIAQQPRTIMQKVDRMVCAVKKVKELGIEPQTRMFVRALRVV 241
            NV +L+ EGVP   + K+I  QPR I Q+ DRMV AV  VK LG+EP+  MF+ ALR +
Sbjct: 183 PNVELLIKEGVPEERVVKMIVAQPRIIYQRRDRMVYAVNAVKNLGLEPKAPMFIYALRSI 242

Query: 242 LSMNDTTWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCFNAAKLDPET 301
           LSMN+ TWKKKI V+KS GW+E+EIL AFK+ P+ L+ SEEKMR   DF  N  K++ + 
Sbjct: 243 LSMNEFTWKKKIEVMKSFGWTEEEILRAFKQYPFQLSSSEEKMRKSMDFLLNTIKMERQA 302

Query: 302 VISYPTFFMSGLDKRLRPRFKVVEVLKVKKLIE-NRKIARLLVVGERIFVKNYVLKHLDE 361
           +I+ P F M   +KRLRPR+ V+++LK KKLIE  +K   LL V E+ F++NYV K+ D+
Sbjct: 303 IIACPKFLMYSTEKRLRPRYDVLKILKSKKLIEIGKKTNYLLTVSEKNFLENYVTKYADK 362

Query: 362 VPDLMEIYRGNATAE 369
           VP L+E+YRG    E
Sbjct: 363 VPGLLEVYRGTTKTE 377

[Close]
BLAST of CmoCh04G013580 vs. TrEMBL
Match: F6HV96_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0084g00030 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.1e-85
Identity = 175/373 (46.92%), Postives = 253/373 (67.83%), Query Frame = 1 

Query: 1   MSKISSTFLLYFIQNRFINT--------VSGSTLPLASVS-TIEFLKNSCGLATDSPSSA 60
           M+K+    LL  +Q RF+ T        +S S+  L S S T +FL  SCGL  DS  S 
Sbjct: 1   MAKLHFQSLLCLMQKRFLTTSSTLYTSSLSSSSSTLLSPSYTAQFLVKSCGLPLDSAISI 60

Query: 61  LRKLQFDEKSAKKYEAVLGFLKSYGFENSQIAKLIAKRSSILQSRVSSNLKPKFEFLEEI 120
            +KL  DE   +K+E+VL FLKS+GF ++ +AKL++K   ILQ+RV   LK K ++L + 
Sbjct: 61  SQKLNLDENKRQKHESVLEFLKSHGFSDTHVAKLVSKCPPILQARVDM-LKLKIDYLHDS 120

Query: 121 GFVGPLLPKVILSNPAILQRGLDSHLKPSFCFIKEMLESDEQANFAIRRSSWLLTSNFKG 180
           GFVGP+L ++I+SNPAIL+R LD  +KPSF F+KE LE++E+   AI+R SWLLT + K 
Sbjct: 121 GFVGPVLHELIVSNPAILRRSLDKQIKPSFDFLKEFLETNEKIAAAIKRESWLLTFDLKK 180

Query: 181 VMQSNVNVLLGEGVPSRNISKLIAQQPRTIMQKVDRMVCAVKKVKELGIEPQTRMFVRAL 240
           +++ N  +L+ EGVP   +SKLI  QPR IMQ VDRMV A ++ + LGI+P   ++V A+
Sbjct: 181 ILKPNTFLLINEGVPHSRMSKLITLQPRVIMQHVDRMVYATERARSLGIKPTDPIYVTAI 240

Query: 241 RVVLSMNDTTWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCFNAAKLD 300
            V+LSM ++TWK+K+ + +  G++E EIL A KR P+ +ACSEEK++++ +F  N  KL 
Sbjct: 241 TVILSMTESTWKRKVELYEKFGFTEVEILKAIKRQPHFMACSEEKIKSLMNFYTNTMKLK 300

Query: 301 PETVISYPTFFMSGLDKRLRPRFKVVEVLKVKKLI-ENRKIARLLVVGERIFVKNYVLKH 360
           P  + +YP   +   D R+RPRF V+ +L  KKL+ +++KIA LL   E  F+ NYV+K+
Sbjct: 301 PSAIATYPRLLLYSFDARIRPRFNVLNILASKKLLKKHKKIAWLLTQSEASFLNNYVIKY 360

Query: 361 LDEVPDLMEIYRG 364
           +D+VPDLME+YRG
Sbjct: 361 VDQVPDLMELYRG 372

[Close]
BLAST of CmoCh04G013580 vs. TrEMBL
Match: A5CAF4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021879 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 2.5e-85
Identity = 173/373 (46.38%), Postives = 251/373 (67.29%), Query Frame = 1 

Query: 1   MSKISSTFLLYFIQNRFINT---------VSGSTLPLASVSTIEFLKNSCGLATDSPSSA 60
           M+K+    LL  +Q RF+ T          S S+  L+   T +FL  SCGL  DS  S 
Sbjct: 1   MAKLHFKSLLCLMQKRFLTTSSTLYTSSLXSSSSTLLSPSYTAQFLVKSCGLPLDSAISI 60

Query: 61  LRKLQFDEKSAKKYEAVLGFLKSYGFENSQIAKLIAKRSSILQSRVSSNLKPKFEFLEEI 120
            +KL  DE   +K+E+VL FLKS+GF ++ +AKL++K   ILQ+RV   LK K ++L + 
Sbjct: 61  SQKLNLDENKRQKHESVLEFLKSHGFSDTHVAKLVSKCPPILQARVDM-LKLKXDYLHDS 120

Query: 121 GFVGPLLPKVILSNPAILQRGLDSHLKPSFCFIKEMLESDEQANFAIRRSSWLLTSNFKG 180
           GFVGP+L ++I+SNPAIL+R LD  +KPSF F+KE LE++E+   AI+R SWLLT + K 
Sbjct: 121 GFVGPVLHELIVSNPAILRRSLDKQIKPSFDFLKEFLETNEKIAAAIKRESWLLTFDLKK 180

Query: 181 VMQSNVNVLLGEGVPSRNISKLIAQQPRTIMQKVDRMVCAVKKVKELGIEPQTRMFVRAL 240
           +++ N  +L+ EGVP   +SKLI  QPR IMQ VDRMV A ++ + LGI+P   ++V A+
Sbjct: 181 ILKPNTFLLINEGVPHSRMSKLITLQPRVIMQHVDRMVYATERARSLGIKPTDPIYVTAI 240

Query: 241 RVVLSMNDTTWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCFNAAKLD 300
            V+LSM ++TWK+K+ + +  G++E EIL A KR P+ +ACSEEK++++ +F  N  KL 
Sbjct: 241 TVILSMTESTWKRKVELYEKFGFTEVEILKAIKRQPHFMACSEEKIKSLMNFYTNTMKLK 300

Query: 301 PETVISYPTFFMSGLDKRLRPRFKVVEVLKVKKLI-ENRKIARLLVVGERIFVKNYVLKH 360
           P  + +YP   +   D R+RPRF V+ +L  KKL+ +++KIA LL   E  F+ NYV+K+
Sbjct: 301 PSAIATYPRLLLYSFDARIRPRFNVLNILASKKLLKKHKKIAWLLTQSEASFLTNYVIKY 360

Query: 361 LDEVPDLMEIYRG 364
           +D+VPDLME+YRG
Sbjct: 361 VDQVPDLMELYRG 372

[Close]
BLAST of CmoCh04G013580 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 204.1 bits (518), Expect = 1.5e-52
Identity = 115/333 (34.53%), Postives = 183/333 (54.95%), Query Frame = 1 

Query: 33  TIEFLKNSCGLATDSPSSALRKLQFDEKSAKKYEAVLGFLKSYGFENSQIAKLIAKRSSI 92
           T+ +L +SCGL+ DS + A RKL  D  S ++   VL  L+ +GF  +QI+ L+ KR  +
Sbjct: 71  TLNYLIDSCGLSPDSATVASRKLLLD--SPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 93  LQSRVSSNLKPKFEFLEEIGFVGPLLPKVILSNPAILQRGLDSHLKPSFCFIKEMLESDE 152
           L +   S L PK  F   IG    LL + + S+P IL R L + L PS+ F+K +L+SDE
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 153 QANFAIRRSSWLLTSNFKGVMQSNVNVLLGEGVPSRNISKLIAQQPRTIMQKVDRMVCAV 212
           +   A+RR++W+   +    +  N+N +   GVP + I  L+   P  +MQK        
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 213 KKVKELGIEPQTRMFVRALRVVLSM-NDTTWKKKINVLKSLGWSEKEILTAFKRDPYCLA 272
           K+ +E+G  PQ   FV A+  +    N + W K   V +  GWSE +I+ AFK+ P+C+ 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 273 CSEEKMRAVADFCFNAAKLDPETVISYPTFFMSGLDKRLRPRFKVVEVLKVKKLI-ENRK 332
            SE K+    ++  N   + P ++   P      L+KR+ PR  V +VL    L+ E+  
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 333 IARLLVVGERIFVKNYVLKHLDEVPDLMEIYRG 364
           +  LLV  E++F++  V+K+ +E+P+LM +Y G
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]
BLAST of CmoCh04G013580 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-33
Identity = 89/340 (26.18%), Postives = 162/340 (47.65%), Query Frame = 1 

Query: 27  PLASVSTIEFLKNSCGLATDSPSSALRKLQFDEKSAKKYEAVLGFLKSYGFENSQIAKLI 86
           P     T+ +L +SCGL+ +S  S  R ++    S+KK ++VL   K +GF N QI  +I
Sbjct: 52  PCLESFTVSYLVDSCGLSLESAKSNSRFVKL--VSSKKPDSVLALFKDHGFTNDQITSVI 111

Query: 87  AKRSSILQSRVSSNLKPKFEFLEEIGFVGPLLPKVILSNPAILQRGLDSHLKPSFCFIKE 146
                +L       + PK  F   IGF      K+I S+P +L   L   L P +  +K 
Sbjct: 112 KSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKS 171

Query: 147 MLESDEQANFAIRRSSWLLTSNFKGVMQSNVNVLLGEGVPSRNISKLIAQQPRTIMQKVD 206
           +L  +E     ++R     +      +   V++    GVP ++I  L+   P T   +  
Sbjct: 172 ILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRER 231

Query: 207 RMVCAVKKVKELGIEPQTRMFVRALRVVLSMNDTTWKKKINVLKSLGWSEKEILTAFKRD 266
           R    + +V   G +P+   FV A+      +++  ++K  + +  GWS+++ + A  R 
Sbjct: 232 RFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRF 291

Query: 267 PYCLACSEEKMRAVADFCFNAAKLDPETVISYPTFFMSGLDKRLRPRFKVVEVLKVKKLI 326
           P C+  S+EK+    ++  N   L    +++ P      ++KR++PR +V+ +L  K L+
Sbjct: 292 PNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLV 351

Query: 327 ENRKI--ARLLVVGERIFVKNYVLKHLDEVPDLMEIYRGN 365
           +   I    +L +    F+  +VLK+ DE+P L++ +  N
Sbjct: 352 KKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSN 389

[Close]
BLAST of CmoCh04G013580 vs. TAIR10
Match: AT1G61970.1 (AT1G61970.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 129.8 bits (325), Expect = 3.5e-30
Identity = 109/374 (29.14%), Postives = 182/374 (48.66%), Query Frame = 1 

Query: 33  TIEFLKNSCGLATDSPSSALRKLQFDEKSAKKYEAVLGFLKSYGFENSQIAKLIAKRSSI 92
           T+ +L +S GL T    S  RK+ F++K+    ++VL  L S+GF  SQI+ +I     +
Sbjct: 54  TVSYLVDSLGLTTKLAESISRKVSFEDKNNP--DSVLNLLTSHGFTGSQISTIIRDYPQL 113

Query: 93  LQSRVSSNLKPKFEFLEEIGFVGPLLPKVILSNPAILQRGLDSHLKPSFCFIKEMLESDE 152
           L +    +L PK +FL+  G     + +++ S P IL +     +   + FIK+ L    
Sbjct: 114 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKS 173

Query: 153 QANFAIRRSSWLLTSNFKGVMQSNVNVLLGEGVPSRNISKLIAQQPRTIMQKVDRMVCAV 212
             N  +  S  L   N +  ++ NV+VL   G+P + +  L+    + +  K ++    +
Sbjct: 174 SKNEKLCHS--LPQGNLENKIR-NVSVLRELGMPHKLLFSLLISDSQPVCGK-EKFEETL 233

Query: 213 KKVKELGIEPQTRMFVRALRVVLSMNDTTWKKKINVLKSLGWSEKEILTAFKRDPYCLAC 272
           KKV E+G +P T  FV AL+V+  MN+ T ++K+++ KSLG+   ++ ++FK+ P  L  
Sbjct: 234 KKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRV 293

Query: 273 SEEKM------------------RAVADF--CFNAAKLDPETVI---------------- 332
           SE+KM                  + V  F  C     L  ETV                 
Sbjct: 294 SEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIG---LSTETVKKKTEFLVKKMNWPLKA 353

Query: 333 --SYPTFFMSGLDKRLRPRFKVVEVLKVKKLIENR--KIARLLVVGERIFVKNYVLKHLD 365
             S P  F   L+KR+ PR  V++ L  K L+ N    I+ +L+  +++F+  YV  H+D
Sbjct: 354 VVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVD 413

[Close]
BLAST of CmoCh04G013580 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 126.3 bits (316), Expect = 3.9e-29
Identity = 82/304 (26.97%), Postives = 154/304 (50.66%), Query Frame = 1 

Query: 60  KSAKKYEAVLGFLKSYGFENSQIAKLIAKRSSILQSRVSSNLKPKFEFLEEIGFVGPLLP 119
           KS ++  +V+  LKSY F ++QI K I     ++   V   L+PK  F ++IGF G  L 
Sbjct: 66  KSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLG 125

Query: 120 KVILSNPAILQRGLDSHLKPSFCFIKEMLE-SDEQANFAIRRSSWLLTSNFKGV-MQSNV 179
           K +  N +++   L   L P+   +K ++    E     + R  WLL S    + +  N+
Sbjct: 126 KFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNI 185

Query: 180 NVLLGEGVPSRNISKLIAQQPRTIMQKVDRMVCAVKKVKELGIEPQTRMFVRALRVVLSM 239
           + L   G+    ++ L+ +QPR      +++   V +  +LG    +RM V A+  + S+
Sbjct: 186 SYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSL 245

Query: 240 NDTTWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCFNAAKLDPETVIS 299
           ++ T+ +K+ +  + G+SE EI    +R P  + CSE+K+    +F      L+ E +  
Sbjct: 246 SEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAK 305

Query: 300 YPTFFMSGLDKRLRPRFKVVEVLKVKKLI-----ENRKIARLLVVGERIFVKNYVLKHLD 357
            P      L+KR+ PR KV+++L+ K L+     + + +  ++ + E  F++ YV++  D
Sbjct: 306 RPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGD 365

[Close]
BLAST of CmoCh04G013580 vs. TAIR10
Match: AT1G62110.1 (AT1G62110.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 121.3 bits (303), Expect = 1.2e-27
Identity = 81/263 (30.80%), Postives = 134/263 (50.95%), Query Frame = 1 

Query: 33  TIEFLKNSCGLATDSPSSALRKLQFDEKSAKKYEAVLGFLKSYGFENSQIAKLIAKRSSI 92
           T+ +L +S GLAT    S  +K+ F  K     + VL   +SYGF NSQI+ +I     +
Sbjct: 54  TVSYLVDSLGLATKLAESISKKVSFVNKGNP--DLVLSLFRSYGFTNSQISSIITDYPRL 113

Query: 93  LQSRVSSNLKPKFEFLEEIGFVGPLLPKVILSNPAILQRGLDSHLKPSFCFIKEMLESDE 152
           L      +L  K +FLE  G   P L +++ + P IL       L   + F+KE++E+D+
Sbjct: 114 LLIDAEKSLDIKLQFLESRGASSPELTQIVSTVPKILGMKEGKSLGRYYDFVKEIIEADK 173

Query: 153 QANFAIRRSSWLLTSNFKGVMQSNVNVLLGEGVPSRNISKLIAQQPRTIMQKVDRMVCAV 212
            + +       L  +N +G    NV+VL   GVP + +  L+    + +  K +    ++
Sbjct: 174 SSKYETLCQP-LPEANRQGNKIRNVSVLRDLGVPQKLLFSLLISDAQPVCGK-ENFEESL 233

Query: 213 KKVKELGIEPQTRMFVRALRVVLSMNDTTWKKKINVLKSLGWSEKEILTAFKRDPYCLAC 272
           KKV E+G +P T  FV+ALR V    D T ++++NV K  G++ +++   FK+ PY L  
Sbjct: 234 KKVVEMGFDPTTSKFVQALRAVYRFTDKTIEERVNVYKGFGFAVEDVWAMFKKCPYFLNS 293

Query: 273 SEEKMRAVADFCFNAAKLDPETV 296
           SE+K+    +       L+ E +
Sbjct: 294 SEKKIGQTIETLKKCGLLEDEVI 312

[Close]
BLAST of CmoCh04G013580 vs. NCBI nr
Match: gi|659090283|ref|XP_008445932.1| (PREDICTED: uncharacterized protein LOC103488811 [Cucumis melo])

HSP 1 Score: 500.0 bits (1286), Expect = 3.7e-138
Identity = 255/374 (68.18%), Postives = 309/374 (82.62%), Query Frame = 1 

Query: 1   MSKISSTFLLYFIQNRFINTVSGSTLPLASVSTIEFLKNSCGLATDSPSSALRKLQFDEK 60
           MSKISS+FLL+F  NRF+NTVS STLPL SVSTI+FL NSCGL++ SP+SA RKLQFDEK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKRSSILQSRVSSNLKPKFEFLEEIGFVGPLLPK 120
             ++Y AV+ FLKS+GFEN+QIA L++KR SILQS+VS+NLKP+FEF +EIGF+GPLLPK
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIGFIGPLLPK 120

Query: 121 VILSNPAILQRGLDSHLKPSFCFIKEMLESDEQANFAIRRSSWLLTSNFKGVMQSNVNVL 180
           +ILS P +L   LDS LKPSF F+K++LESDEQ   AI R   LL S+ KG ++SN++VL
Sbjct: 121 LILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAICRFPSLLVSDLKGNLKSNIDVL 180

Query: 181 LGEGVPSRNISKLIAQQPRTIMQKVDRMVCAVKKVKELGIEPQTRMFVRALRVVLSMNDT 240
             EGVPSRNI+K+I   PRT+MQKVDRM+  VKKVKELGIEP+TR FV A+R+  S++D+
Sbjct: 181 ASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIRIRGSLSDS 240

Query: 241 TWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCFNAAKLDPETVISYPT 300
           TWKKKINV+KSLGWSE EILTAFK+DP  L+CSEEK+R V DFC N AKLDPETVISYPT
Sbjct: 241 TWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDPETVISYPT 300

Query: 301 FFMSGLDKRLRPRFKVVEVLKVKKLIENR-KIARLLVVGERIFVKNYVLKHLDEVPDLME 360
            FMS LDKRLRPRFK++E LKVK L++N  KI R LV GER FV+ YV+KHLD++P+LM+
Sbjct: 301 LFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRALVRGEREFVERYVVKHLDKIPNLMD 360

Query: 361 IYRGNATAEARPVL 374
           IYRGN   E + VL
Sbjct: 361 IYRGNVATETKSVL 374

[Close]
BLAST of CmoCh04G013580 vs. NCBI nr
Match: gi|659090428|ref|XP_008446011.1| (PREDICTED: uncharacterized protein LOC103488865 [Cucumis melo])

HSP 1 Score: 499.6 bits (1285), Expect = 4.8e-138
Identity = 255/373 (68.36%), Postives = 307/373 (82.31%), Query Frame = 1 

Query: 1   MSKISSTFLLYFIQNRFINTVSGSTLPLASVSTIEFLKNSCGLATDSPSSALRKLQFDEK 60
           M K SSTFLL+FIQ RF+NTVS STLPLASVST+EFL NSCGL++ SP+S  RKLQFDEK
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTVEFLTNSCGLSSGSPTSNGRKLQFDEK 60

Query: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKRSSILQSRVSSNLKPKFEFLEEIGFVGPLLPK 120
           + ++YEAV+GFLKS+G EN QIAKL++++  ILQS+VS+NLKPKFEFL+EIGFVGPLL K
Sbjct: 61  NIQQYEAVIGFLKSHGLENPQIAKLVSRKPWILQSKVSTNLKPKFEFLQEIGFVGPLLSK 120

Query: 121 VILSNPAILQRGLDSHLKPSFCFIKEMLESDEQANFAIRRSSWLLTSNFKGVMQSNVNVL 180
           +ILSNP I  R LDS LKPSF F+KE+LESDEQ   AIR S WLL S+FKG+++SN++VL
Sbjct: 121 LILSNPRIFYRNLDSQLKPSFFFLKEILESDEQVTAAIRHSPWLLISDFKGILKSNIDVL 180

Query: 181 LGEGVPSRNISKLIAQQPRTIMQKVDRMVCAVKKVKELGIEPQTRMFVRALRVVLSMNDT 240
             EGVPSRNI+KLI    RTIM+KVDRM+  VK VKELGIEP+  MFV ALR+  S++D+
Sbjct: 181 ASEGVPSRNIAKLIVSNSRTIMRKVDRMIEVVKTVKELGIEPKAGMFVHALRIRCSVSDS 240

Query: 241 TWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCFNAAKLDPETVISYPT 300
           TWKKKINV+KSLGWSE EI TAFK+DP  L CSEEKMR VADFCFN AKLDP +VI  P 
Sbjct: 241 TWKKKINVMKSLGWSETEIFTAFKKDPSFLGCSEEKMRDVADFCFNTAKLDPGSVIICPK 300

Query: 301 FFMSGLDKRLRPRFKVVEVLKVKKLIENRKIARLLVVGERIFVKNYVLKHLDEVPDLMEI 360
            F   +DKRL+PR+KV+EVLKVK L++N  IA +LV  ER FVK +V++HLDE+P+LM+I
Sbjct: 301 IFKCSVDKRLQPRYKVLEVLKVKNLLKNVNIAWVLVQSERAFVKKFVVRHLDEIPNLMDI 360

Query: 361 YRGNATAEARPVL 374
           YRGN TAE + VL
Sbjct: 361 YRGNVTAETKSVL 373

[Close]
BLAST of CmoCh04G013580 vs. NCBI nr
Match: gi|659090316|ref|XP_008445950.1| (PREDICTED: uncharacterized protein LOC103488825 [Cucumis melo])

HSP 1 Score: 494.6 bits (1272), Expect = 1.5e-136
Identity = 254/374 (67.91%), Postives = 312/374 (83.42%), Query Frame = 1 

Query: 1   MSKISSTFLLYFIQNRFINTVSGSTLPLASVSTIEFLKNSCGLATDSPSSALRKLQFDEK 60
           MSKISS+FLL+F  NRF+NT+  STLPLASVSTI+FL NSCGL++ SP+SA RKLQF EK
Sbjct: 20  MSKISSSFLLHFFHNRFLNTIPTSTLPLASVSTIQFLTNSCGLSSGSPTSAGRKLQFGEK 79

Query: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKRSSILQSRVSSNLKPKFEFLEEIGFVGPLLPK 120
           + ++Y AV+ FLKS+GFEN QIAKL++++ SILQSRVS+NLKPKFEFL+EIGFVGPLLPK
Sbjct: 80  NTQQYGAVIDFLKSHGFENPQIAKLVSRQPSILQSRVSANLKPKFEFLQEIGFVGPLLPK 139

Query: 121 VILSNPAILQRGLDSHLKPSFCFIKEMLESDEQANFAIRRSSWLLTSNFKGVMQSNVNVL 180
           +I+S+P+IL + LDS LKPSF  +KEML SDE+   AI R+SWLLT +FKGV++SN +VL
Sbjct: 140 LIVSSPSILNKSLDSKLKPSFRLLKEMLGSDERVTAAICRASWLLTYDFKGVIKSNFDVL 199

Query: 181 LGEGVPSRNISKLIAQQPRTIMQKVDRMVCAVKKVKELGIEPQTRMFVRALRVVLSMNDT 240
           + EGVPSRNI+K+IA  PRTIMQ+VD+M+  VK VKELGIEP+  MF +A+ V L M+D+
Sbjct: 200 VSEGVPSRNIAKMIAWNPRTIMQRVDKMIQVVKNVKELGIEPKAGMFFQAVLVRLQMSDS 259

Query: 241 TWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCFNAAKLDPETVISYPT 300
           TWKKKINV+KSLGWSEKEILTAFKR P CL CSEEKMR VADFCFN AKLDP T+IS P 
Sbjct: 260 TWKKKINVMKSLGWSEKEILTAFKRYPLCLTCSEEKMRDVADFCFNTAKLDPGTLISNPV 319

Query: 301 FFMSGLDKRLRPRFKVVEVLKVKKLIENRKIARL--LVVGERIFVKNYVLKHLDEVPDLM 360
           FF   ++KRLRPR+KV+EVLKVK L+ N+KIA     + GER FV+N V+KHLDE+P+LM
Sbjct: 320 FFKLSVNKRLRPRYKVLEVLKVKNLLRNKKIALAWWFMQGEREFVENNVVKHLDEIPNLM 379

Query: 361 EIYRGNATAEARPV 373
           +IYRGN  +E + V
Sbjct: 380 DIYRGNDASETQSV 393

[Close]
BLAST of CmoCh04G013580 vs. NCBI nr
Match: gi|778704338|ref|XP_011655521.1| (PREDICTED: uncharacterized protein LOC101219984 [Cucumis sativus])

HSP 1 Score: 489.2 bits (1258), Expect = 6.4e-135
Identity = 245/369 (66.40%), Postives = 308/369 (83.47%), Query Frame = 1 

Query: 1   MSKISSTFLLYFIQNRFINTVSGSTLPLASVSTIEFLKNSCGLATDSPSSALRKLQFDEK 60
           MSKISSTFLL+FIQ RF+NT+S STLPL SVSTI+FL+NSCGL++ SP+S  RKLQFDE+
Sbjct: 1   MSKISSTFLLHFIQKRFLNTISTSTLPLPSVSTIQFLQNSCGLSSGSPTSGGRKLQFDEQ 60

Query: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKRSSILQSRVSSNLKPKFEFLEEIGFVGPLLPK 120
           + +KY AV+GFLKS+ FEN QIA L+++R S+LQS+VS+NLKPKFEFL+EIGFVGPLLPK
Sbjct: 61  NIQKYGAVIGFLKSHAFENPQIANLVSRRPSLLQSKVSTNLKPKFEFLQEIGFVGPLLPK 120

Query: 121 VILSNPAILQRGLDSHLKPSFCFIKEMLESDEQANFAIRRSSWLLTSNFKGVMQSNVNVL 180
           +IL+NP+IL   LDSHLKPSF  +KEM+ESDEQ   AI RSSWL T NFK +++ N +VL
Sbjct: 121 LILANPSILLWSLDSHLKPSFRLLKEMVESDEQVTAAIFRSSWLPTFNFKSIVKPNFDVL 180

Query: 181 LGEGVPSRNISKLIAQQPRTIMQKVDRMVCAVKKVKELGIEPQTRMFVRALRVVLSMNDT 240
           + EGVPSRN++KLI  QPR I QKVDR++  V+ VKELGIEP+ R+F+RALRV+ S++D+
Sbjct: 181 VSEGVPSRNLAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDS 240

Query: 241 TWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCFNAAKLDPETVISYPT 300
           TWKKKINV+KSLGWSEKEILTAFKR P  L CSEEK+R VADFC N AKLDP ++ISYP 
Sbjct: 241 TWKKKINVMKSLGWSEKEILTAFKRFPPYLTCSEEKLRDVADFCSNTAKLDPASLISYPV 300

Query: 301 FFMSGLDKRLRPRFKVVEVLKVKKLIENRKIARLLVVGERIFVKNYVLKHLDEVPDLMEI 360
            F   + KRL+PR KV+EVLK+K L++ ++IA + V GE+ FV+ Y++KHLDE+P+LM+I
Sbjct: 301 LFKYSVHKRLQPRCKVIEVLKMKNLLKIKRIASVFVKGEKEFVEKYIVKHLDEIPNLMDI 360

Query: 361 YRGNATAEA 370
           Y+GN   EA
Sbjct: 361 YKGNVETEA 369

[Close]
BLAST of CmoCh04G013580 vs. NCBI nr
Match: gi|778700689|ref|XP_011654901.1| (PREDICTED: uncharacterized protein LOC101206293 [Cucumis sativus])

HSP 1 Score: 488.4 bits (1256), Expect = 1.1e-134
Identity = 258/374 (68.98%), Postives = 304/374 (81.28%), Query Frame = 1 

Query: 1   MSKISSTFLLYFIQNRFINTVSGSTLPLASVSTIEFLKNSCGLATDSPSS-ALRKLQFDE 60
           M K SSTFLL+F Q R +NT+S STLPL SVST+EFLKNSC L+++SPS  A RK QFDE
Sbjct: 1   MFKFSSTFLLHFFQKRSLNTISTSTLPLPSVSTLEFLKNSCRLSSESPSFVAGRKFQFDE 60

Query: 61  KSAKKYEAVLGFLKSYGFENSQIAKLIAKRSSILQSRVSSNLKPKFEFLEEIGFVGPLLP 120
           K+ ++YEA++GFLKS+GFE+S+IAKL++KR  ILQSRVS+NLKPKFEFL+EIGFVGPLL 
Sbjct: 61  KNIQQYEAIIGFLKSHGFEDSEIAKLVSKRPFILQSRVSNNLKPKFEFLQEIGFVGPLLF 120

Query: 121 KVILSNPAILQRGLDSHLKPSFCFIKEMLESDEQANFAIRRSSWLLTSNFKGVMQSNVNV 180
           K+ LSNP IL R LDS LKP F F+KEML SDEQ   AIRRS WLLTS+FKG+++SN++V
Sbjct: 121 KLFLSNPWILYRNLDSQLKPLFFFLKEMLGSDEQVISAIRRSPWLLTSDFKGILKSNIDV 180

Query: 181 LLGEGVPSRNISKLIAQQPRTIMQKVDRMVCAVKKVKELGIEPQTRMFVRALRVVLSMND 240
           L  EGVPS NI+KLIA   RTIM  VDRM+  VK VKELGIEP++  F+ ALRV  +M+D
Sbjct: 181 LASEGVPSSNIAKLIAYNSRTIMHTVDRMIQVVKMVKELGIEPKSARFLHALRVRCAMSD 240

Query: 241 TTWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCFNAAKLDPETVISYP 300
           +TWKKKINVLKSLGWSE EILT FKR P CLA SEE  R VADFCFN AKLDPETVISYP
Sbjct: 241 STWKKKINVLKSLGWSENEILTLFKRQPICLARSEEAFRDVADFCFNTAKLDPETVISYP 300

Query: 301 TFFMSGLDKRLRPRFKVVEVLKVKKLIENRKIARLLVVGERIFVKNYVLKHLDEVPDLME 360
            FF   +DK L PR+KV+EVLKVK L+++RK+AR L + ER FV+ YVLKHLDE+P LM+
Sbjct: 301 KFFTYSVDK-LWPRYKVLEVLKVKNLLKDRKVARALTLVERQFVETYVLKHLDEIPKLMD 360

Query: 361 IYRGNATAEARPVL 374
           IYRGN TAE   VL
Sbjct: 361 IYRGNVTAETSSVL 373

The following BLAST results are available for this feature:
BLAST of CmoCh04G013580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh04G013580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A067L028_JATCU6.6e-9450.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24592 PE=4 SV=1[more]
M5XTI6_PRUPE2.6e-9050.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021790mg PE=4 SV=1[more]
B9GLU5_POPTR4.4e-9048.53Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s07200g PE=4 SV=1[more]
F6HV96_VITVI1.1e-8546.92Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0084g00030 PE=4 SV=... [more]
A5CAF4_VITVI2.5e-8546.38Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021879 PE=4 SV=1[more]
BLAST of CmoCh04G013580 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07900.11.5e-5234.53 Mitochondrial transcription termination factor family protein[more]
AT1G21150.11.2e-3326.18 Mitochondrial transcription termination factor family protein[more]
AT1G61970.13.5e-3029.14 Mitochondrial transcription termination factor family protein[more]
AT5G64950.13.9e-2926.97 Mitochondrial transcription termination factor family protein[more]
AT1G62110.11.2e-2730.80 Mitochondrial transcription termination factor family protein[more]
BLAST of CmoCh04G013580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090283|ref|XP_008445932.1|3.7e-13868.18PREDICTED: uncharacterized protein LOC103488811 [Cucumis melo][more]
gi|659090428|ref|XP_008446011.1|4.8e-13868.36PREDICTED: uncharacterized protein LOC103488865 [Cucumis melo][more]
gi|659090316|ref|XP_008445950.1|1.5e-13667.91PREDICTED: uncharacterized protein LOC103488825 [Cucumis melo][more]
gi|778704338|ref|XP_011655521.1|6.4e-13566.40PREDICTED: uncharacterized protein LOC101219984 [Cucumis sativus][more]
gi|778700689|ref|XP_011654901.1|1.1e-13468.98PREDICTED: uncharacterized protein LOC101206293 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003690 double-stranded DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G013580.1CmoCh04G013580.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 69..276
score: 5.3E-28coord: 233..339
score: 5.6
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 260..291
score: 710.0coord: 155..186
score: 1100.0coord: 225..255
score: 0.15coord: 119..150
score: 5.5coord: 191..221
score: 790.0coord: 292..323
score: 2.9coord: 83..114
score: 0.
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 2..370
score: 1.3E
NoneNo IPR availablePANTHERPTHR13068:SF20SUBFAMILY NOT NAMEDcoord: 2..370
score: 1.3E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G013580Silver-seed gourdcarcmoB0986
CmoCh04G013580Silver-seed gourdcarcmoB0987
CmoCh04G013580Silver-seed gourdcarcmoB1138
CmoCh04G013580Cucumber (Chinese Long) v3cmocucB0849
CmoCh04G013580Watermelon (97103) v2cmowmbB698
CmoCh04G013580Wax gourdcmowgoB0891
CmoCh04G013580Cucurbita moschata (Rifu)cmocmoB336
CmoCh04G013580Cucurbita moschata (Rifu)cmocmoB343
CmoCh04G013580Cucumber (Gy14) v1cgycmoB0124
CmoCh04G013580Cucurbita maxima (Rimu)cmacmoB420
CmoCh04G013580Cucurbita maxima (Rimu)cmacmoB425
CmoCh04G013580Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G013580Wild cucumber (PI 183967)cmocpiB725
CmoCh04G013580Cucumber (Chinese Long) v2cmocuB717
CmoCh04G013580Melon (DHL92) v3.5.1cmomeB644
CmoCh04G013580Watermelon (Charleston Gray)cmowcgB624
CmoCh04G013580Watermelon (97103) v1cmowmB724
CmoCh04G013580Cucurbita pepo (Zucchini)cmocpeB648
CmoCh04G013580Cucurbita pepo (Zucchini)cmocpeB651
CmoCh04G013580Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G013580Bottle gourd (USVL1VR-Ls)cmolsiB669
CmoCh04G013580Cucumber (Gy14) v2cgybcmoB628
CmoCh04G013580Melon (DHL92) v3.6.1cmomedB734