CmoCh04G013400 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G013400
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	GRAM domain-containing protein / ABA-responsive protein-related
Location	Cmo_Chr04 : 6825154 .. 6826208 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATTACAATTCAAGAACATGTTTTTGGAGCTCAGATGAAGTCTTTGGGTCTTGCTCGAGCAAGATTTTTGGCTGATCCCTCCAAGCATTTCCATATGTCTTCTTTAGATGATGGGTCTCAATCAATTCAGAAATGTAAGCTTAAGAAGAACAAAAAAAGTGTTCTTTTTTGGTTGAATCTATGAATAATTTGCTGATTTGGGTTTTGAATTGTTGCAGATAATGGGAAAGATTGGATCTTGAATAGAGTCCACAAAAATGGGAGAAAACCCGACAATATCATCCGTGCACTCCGAGAACATGGTAAGTCATCTACCAACATTCCAAAATTTGAATTAGGATTTGGTATTGAAAGCTATCCTGACCTACCAACGTACATGGTAGGAATAGTTTTCTCTCTTAGAAAGTAGGTGACACGATTAATAGTTCACCATTTCTTATCATTTGGGGTCGGATTTGCAGTGAAATTAGGAGCGAAGATCACAGAAACAGTGAAGGGAAAGTTGAGGTTAGGAGCAAGAATTGTAAGGGTTGGAGGGGTGAGGAAGATCTACAAGAAGCTATTCACAGTGAGTGAAGGAGAGAAGCTTTTGAAGGCATCACAATGCTATTTGTCAACAACAGCTGGGCCTATGGCTGGCCTTCTCTTCATTTCCACTCATAACATTGCCTTTTGCAGTGATAAATCCATCAAACTCTCTTCCCCAAATGGCGAAGAACATGTTAGAATTCACTATAAGGTAATTAAGCCCTCCTTAAGAATGCCTGTTTTTGATTAATTTGTGATTTGTAAGCTTAAGATGAACAAATTTTGCAGGTTGTGATACCAAATGAGAAGGTGATGAGAGTAAATGAGAGTGAGAATGTGAAGAAAGCATCACAAAAGTACATACAAATAGTGACAGTGGACAAGTTCGAGTTTTGGTTTATGGGGTTTCTAAAGTATCAATCAACTTTCAACTCTCTTCAAGCACTACAAAGATGACTTTGAGCTGTCTGCTTTTCTCATGGTTGGATGATGAAGATGTGTCTATGAATATGCAACTTGAAG

mRNA sequence

ATGAAAATTACAATTCAAGAACATGTTTTTGGAGCTCAGATGAAGTCTTTGGGTCTTGCTCGAGCAAGATTTTTGGCTGATCCCTCCAAGCATTTCCATATGTCTTCTTTAGATGATGGGTCTCAATCAATTCAGAAATATAATGGGAAAGATTGGATCTTGAATAGAGTCCACAAAAATGGGAGAAAACCCGACAATATCATCCGTGCACTCCGAGAACATGTGAAATTAGGAGCGAAGATCACAGAAACAGTGAAGGGAAAGTTGAGGTTAGGAGCAAGAATTGTAAGGGTTGGAGGGGTGAGGAAGATCTACAAGAAGCTATTCACAGTGAGTGAAGGAGAGAAGCTTTTGAAGGCATCACAATGCTATTTGTCAACAACAGCTGGGCCTATGGCTGGCCTTCTCTTCATTTCCACTCATAACATTGCCTTTTGCAGTGATAAATCCATCAAACTCTCTTCCCCAAATGGCGAAGAACATGTTAGAATTCACTATAAGGTTGTGATACCAAATGAGAAGGTGATGAGAGTAAATGAGAGTGAGAATGTGAAGAAAGCATCACAAAAGTACATACAAATAGTGACAGTGGACAAGTTCGAGTTTTGGTTTATGGGGTTTCTAAAGTATCAATCAACTTTCAACTCTCTTCAAGCACTACAAAGATGACTTTGAGCTGTCTGCTTTTCTCATGGTTGGATGATGAAGATGTGTCTATGAATATGCAACTTGAAG

Coding sequence (CDS)

ATGAAAATTACAATTCAAGAACATGTTTTTGGAGCTCAGATGAAGTCTTTGGGTCTTGCTCGAGCAAGATTTTTGGCTGATCCCTCCAAGCATTTCCATATGTCTTCTTTAGATGATGGGTCTCAATCAATTCAGAAATATAATGGGAAAGATTGGATCTTGAATAGAGTCCACAAAAATGGGAGAAAACCCGACAATATCATCCGTGCACTCCGAGAACATGTGAAATTAGGAGCGAAGATCACAGAAACAGTGAAGGGAAAGTTGAGGTTAGGAGCAAGAATTGTAAGGGTTGGAGGGGTGAGGAAGATCTACAAGAAGCTATTCACAGTGAGTGAAGGAGAGAAGCTTTTGAAGGCATCACAATGCTATTTGTCAACAACAGCTGGGCCTATGGCTGGCCTTCTCTTCATTTCCACTCATAACATTGCCTTTTGCAGTGATAAATCCATCAAACTCTCTTCCCCAAATGGCGAAGAACATGTTAGAATTCACTATAAGGTTGTGATACCAAATGAGAAGGTGATGAGAGTAAATGAGAGTGAGAATGTGAAGAAAGCATCACAAAAGTACATACAAATAGTGACAGTGGACAAGTTCGAGTTTTGGTTTATGGGGTTTCTAAAGTATCAATCAACTTTCAACTCTCTTCAAGCACTACAAAGATGA

Homology

[Close]

BLAST of CmoCh04G013400 vs. Swiss-Prot
Match: GEML4_ARATH (GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.5e-49
Identity = 106/195 (54.36%), Postives = 140/195 (71.79%), Query Frame = 1


Query: 24  FLADPSKHFHMSSLDDGSQSIQKYNGKDWILNRVHKNGRKPDNIIRALREHVKLGAKITE 83
           +L DP+  F+   +   S+  ++ N K  IL R     +K D     +R+  K+  K+TE
Sbjct: 23  YLPDPAS-FNKFRVPASSKKSEQSNVKS-ILKR-----KKTDGFTNGVRDQSKIRPKLTE 82

Query: 84  TVKGKLRLGARIVRVGGVRKIYKKLFTVSEGEKLLKASQCYLSTTAGPMAGLLFISTHNI 143
           TVK KL LGARI++VGG+ KI+K+LF VSEGEKL K  QCYLSTTAGP+AGLLFIS+  +
Sbjct: 83  TVKRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKM 142

Query: 144 AFCSDKSIKLSSPNGEEHVRIHYKVVIPNEKVMRVNESENVKKASQKYIQIVTVDKFEFW 203
           AFCS++SIK+ SP G + +R+HYKV IP  K+ RVN+S+N KK SQKY+++VTVD F+FW
Sbjct: 143 AFCSERSIKVDSPQG-DIIRVHYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVTVDGFDFW 202

Query: 204 FMGFLKYQSTFNSLQ 219
           FMGFL YQ  FN L+
Sbjct: 203 FMGFLSYQKAFNCLE 209

[Close]

BLAST of CmoCh04G013400 vs. Swiss-Prot
Match: GEML8_ARATH (Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.1e-48
Identity = 97/157 (61.78%), Postives = 124/157 (78.98%), Query Frame = 1


Query: 62  RKPDNIIRALREHVKLGAKITETVKGKLRLGARIVRVGGVRKIYKKLFTVSEGEKLLKAS 121
           +K D+    +R+  KLG K+TETVK KL LGARI+++GG+ KIYK+LF VS+ EKL KA 
Sbjct: 55  KKNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAY 114

Query: 122 QCYLSTTAGPMAGLLFISTHNIAFCSDKSIKLSSPNGEEHVRIHYKVVIPNEKVMRVNES 181
           QCYLSTTAGP+AGLLFIS+  IAFCS++SIK++SP GE + R+HYKV IP  K+  VN+S
Sbjct: 115 QCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELN-RVHYKVSIPLCKINGVNQS 174

Query: 182 ENVKKASQKYIQIVTVDKFEFWFMGFLKYQSTFNSLQ 219
           +N  K SQKY+++VTVD F+FWFMGFL YQ  FN L+
Sbjct: 175 QNTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLE 210

[Close]

BLAST of CmoCh04G013400 vs. Swiss-Prot
Match: GEML6_ARATH (GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2)

HSP 1 Score: 188.7 bits (478), Expect = 6.7e-47
Identity = 94/157 (59.87%), Postives = 121/157 (77.07%), Query Frame = 1


Query: 62  RKPDNIIRALREHVKLGAKITETVKGKLRLGARIVRVGGVRKIYKKLFTVSEGEKLLKAS 121
           +K D+     R+  KLG K+TETVK KL LGA+I+++GG+ KIYK+LF V + EKL KA 
Sbjct: 55  KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAY 114

Query: 122 QCYLSTTAGPMAGLLFISTHNIAFCSDKSIKLSSPNGEEHVRIHYKVVIPNEKVMRVNES 181
           QCYLSTTAGP+AGLLFIS+  IAFCS++SIK++SP G    R+HYKV IP  K+  VN+S
Sbjct: 115 QCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGVLS-RVHYKVSIPLCKINGVNQS 174

Query: 182 ENVKKASQKYIQIVTVDKFEFWFMGFLKYQSTFNSLQ 219
           +N KK SQKY++IVT+D F+FWFMGF+ YQ  FN L+
Sbjct: 175 QNTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFNCLE 210

[Close]

BLAST of CmoCh04G013400 vs. Swiss-Prot
Match: GEML7_ARATH (GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.8e-45
Identity = 90/157 (57.32%), Postives = 120/157 (76.43%), Query Frame = 1


Query: 62  RKPDNIIRALREHVKLGAKITETVKGKLRLGARIVRVGGVRKIYKKLFTVSEGEKLLKAS 121
           +K D+     R+  KLG K+TETVK KL LGA+I+++GG+ KIYK+LF V + EKL KA 
Sbjct: 47  KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAY 106

Query: 122 QCYLSTTAGPMAGLLFISTHNIAFCSDKSIKLSSPNGEEHVRIHYKVVIPNEKVMRVNES 181
           QCYLSTT G +AGLLFIS+  IAFCS++SIK++SP G +  R+HYKV IP  K+  VN+S
Sbjct: 107 QCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQG-DLTRVHYKVSIPLCKINGVNQS 166

Query: 182 ENVKKASQKYIQIVTVDKFEFWFMGFLKYQSTFNSLQ 219
           +N KK SQ+Y+++VTVD ++FWFMGF+ YQ  FN L+
Sbjct: 167 QNTKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLE 202

[Close]

BLAST of CmoCh04G013400 vs. Swiss-Prot
Match: GEML2_ARATH (GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g01600 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.0e-30
Identity = 68/169 (40.24%), Postives = 105/169 (62.13%), Query Frame = 1


Query: 53  ILNRVHKN----GRKPDNIIRALREHVKLGAKITETVKGKLRLGARIVRVGGVRKIYKKL 112
           +LNR  K      RK + ++  L++H+K    I++    +L  G +++  GG  +++++ 
Sbjct: 52  VLNRCGKKVEDATRKAEALVGGLKDHLKFSPSISDAAMARLSQGTKMIVEGGPERVFQRE 111

Query: 113 FTVSEGEKLLKASQCYLSTTAGPMAGLLFISTHNIAFCSDKSIKLSSPNGEEHVRIHYKV 172
           F V   EKLL +  CY+STT+GP+ G+++IS   IAFCSD +I+L S  G   V  +YKV
Sbjct: 112 FGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKV 171

Query: 173 VIPNEKVMRVNESENVKKASQKYIQIVTVDKFEFWFMGFLKYQSTFNSL 218
           V+  EK+  ++ S NV K S++Y+ +VT D FEFWFMGF+ Y   FN L
Sbjct: 172 VMEWEKISSISSSTNVLKPSERYVHMVTRDGFEFWFMGFVSYIDAFNCL 220

[Close]

BLAST of CmoCh04G013400 vs. TrEMBL
Match: A0A0A0KV22_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G578990 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.8e-86
Identity = 167/219 (76.26%), Postives = 189/219 (86.30%), Query Frame = 1


Query: 1   MKITIQEH-VFGAQMKSLGLARARFLADPSKHFHMSSLDDGSQSIQKYNGKDWILNRVHK 60
           MK TIQE  V G QMKSLGLARAR L DPSK+ H+SS DDGSQSI+KYNGKD ILNR++K
Sbjct: 1   MKTTIQEQIVLGIQMKSLGLARARLLGDPSKYLHISSSDDGSQSIKKYNGKDCILNRLNK 60

Query: 61  NGRKPDNIIRALREHVKLGAKITETVKGKLRLGARIVRVGGVRKIYKKLFTVSEGEKLLK 120
           NG+K DNII ALREHVKLGAKI+ETVKGKL LGARI+RVGGVRKIYKKLF++SE EKLLK
Sbjct: 61  NGKKTDNIIHALREHVKLGAKISETVKGKLSLGARILRVGGVRKIYKKLFSMSEEEKLLK 120

Query: 121 ASQCYLSTTAGPMAGLLFISTHNIAFCSDKSIKLSSPNGEEHVRIHYKVVIPNEKVMRVN 180
            SQCYLSTTAGP+ GLLFISTH IAFCSDKSIK++SPNG +H+RIHYKV IP  K+ RV 
Sbjct: 121 VSQCYLSTTAGPLPGLLFISTHKIAFCSDKSIKIASPNG-DHIRIHYKVTIPLGKITRVF 180

Query: 181 ESENVKKASQKYIQIVTVDKFEFWFMGFLKYQSTFNSLQ 219
           +SENVK  S+KY++IVTVD +EFWFMGFL Y  +FN LQ
Sbjct: 181 QSENVKNPSEKYMEIVTVDNYEFWFMGFLNYHKSFNCLQ 218

[Close]

BLAST of CmoCh04G013400 vs. TrEMBL
Match: A0A0A0KPM2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G579030 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 4.1e-83
Identity = 161/204 (78.92%), Postives = 181/204 (88.73%), Query Frame = 1


Query: 16  SLGLARARFLADPSKHFHMSSLDDGSQS-IQKYNGKDWILNRVHKNGRKPDNIIRALREH 75
           SL L+RAR+L+ PS   H+SS DDG QS I+KYNGKD IL R++KNG+K DNII ALREH
Sbjct: 2   SLALSRARYLSHPSNRLHLSSSDDGFQSSIKKYNGKDCILKRLNKNGKKTDNIIHALREH 61

Query: 76  VKLGAKITETVKGKLRLGARIVRVGGVRKIYKKLFTVSEGEKLLKASQCYLSTTAGPMAG 135
           VKLGAKI+ETVKGKL LGARI+RVGGVRKIYKKLF++SE EKLLK SQCYLSTTAGP+ G
Sbjct: 62  VKLGAKISETVKGKLSLGARILRVGGVRKIYKKLFSMSEEEKLLKVSQCYLSTTAGPLPG 121

Query: 136 LLFISTHNIAFCSDKSIKLSSPNGEEHVRIHYKVVIPNEKVMRVNESENVKKASQKYIQI 195
           LLFISTH IAFCSDKSIK++SPNG +H+RIHYKVVIP EKVMRVNESENVKK S++YIQI
Sbjct: 122 LLFISTHKIAFCSDKSIKIASPNG-DHIRIHYKVVIPKEKVMRVNESENVKKTSERYIQI 181

Query: 196 VTVDKFEFWFMGFLKYQSTFNSLQ 219
            T+D FEFWFMGFL YQSTFNSLQ
Sbjct: 182 ETLDNFEFWFMGFLNYQSTFNSLQ 204

[Close]

BLAST of CmoCh04G013400 vs. TrEMBL
Match: A0A0A0KT32_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G579000 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 3.4e-82
Identity = 161/209 (77.03%), Postives = 180/209 (86.12%), Query Frame = 1


Query: 16  SLGLARARFLADPSKHFHMSSLDD--GSQSIQKYNGKDWILNRVHKNGRKPDNIIRALRE 75
           SL L+RAR L   SKH H+SS DD     SI+KYNGKD IL R++KNG+K DNII ALRE
Sbjct: 2   SLALSRARSLGHSSKHLHVSSSDDRISQSSIKKYNGKDCILKRLNKNGKKTDNIIHALRE 61

Query: 76  HVKLGAKITETVKGKLRLGARIVRVGGVRKIYKKLFTVSEGEKLLKASQCYLSTTAGPMA 135
           HVKLGAKI+ETVKGKL LGARI+RVGGVRKIYKKLF++SE EKLLK SQCYLSTTAGP+ 
Sbjct: 62  HVKLGAKISETVKGKLSLGARILRVGGVRKIYKKLFSMSEEEKLLKVSQCYLSTTAGPLP 121

Query: 136 GLLFISTHNIAFCSDKSIKLSSPNGEEHVRIHYKVVIPNEKVMRVNESENVKKASQKYIQ 195
           GLLFISTH IAFCSDKSIK++SPNG +H+RIHYKVVIP EKVMRVNESENVKK S++YIQ
Sbjct: 122 GLLFISTHKIAFCSDKSIKIASPNG-DHIRIHYKVVIPKEKVMRVNESENVKKTSERYIQ 181

Query: 196 IVTVDKFEFWFMGFLKYQSTFNSLQALQR 223
           I T+D FEFWFMGFL YQSTFNSLQ + R
Sbjct: 182 IETLDNFEFWFMGFLNYQSTFNSLQEVAR 209

[Close]

BLAST of CmoCh04G013400 vs. TrEMBL
Match: A0A0A0KRR9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G579020 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 6.3e-68
Identity = 150/228 (65.79%), Postives = 178/228 (78.07%), Query Frame = 1


Query: 1   MKITIQEHVFGAQMKSLGLARARFLADPSKHFHMSSLDDGSQSIQKYNGKDWILNRVHKN 60
           MK TIQEH+   QM +L LA+AR+L   SKH  +SS ++GS  ++K NGKDWILNR++KN
Sbjct: 1   MKTTIQEHMLEFQM-TLALAKARYLGHSSKHLDISSSNNGS--LKKGNGKDWILNRLNKN 60

Query: 61  GRKP---DNIIRALREHVKLGAKITETVKGKLRLGARIVRVGGVRKIYKKLFTVSEGEKL 120
             K    D+II AL+EHVKLG KI+E +KGKL LG R +RVGG+RK+YKKLF ++E EKL
Sbjct: 61  EGKTDMLDDIIHALQEHVKLGGKISEKIKGKLGLGGRTLRVGGMRKMYKKLFPMNEEEKL 120

Query: 121 LKASQCYLSTTAGPMAGLLFISTHNIAFCSDKSIK-LSSPNGE-EHVRIHYKVVIPNEKV 180
           LK SQCYLSTTAGP+ GLLF+STH IAFCS KSI  LS PNG+ ++VRIHYKVVIP EKV
Sbjct: 121 LKVSQCYLSTTAGPLGGLLFLSTHKIAFCSAKSITVLSPPNGDNDYVRIHYKVVIPMEKV 180

Query: 181 MRVNESE--NVKKASQKYIQIVTVDKFEFWFMGFL-KYQSTFNSLQAL 221
           M VNES+  NVK  S+KYIQIVTVD  EFWFMG L  YQS FNSL+ L
Sbjct: 181 MGVNESDQKNVKTDSEKYIQIVTVDNLEFWFMGLLNNYQSIFNSLEVL 225

[Close]

BLAST of CmoCh04G013400 vs. TrEMBL
Match: A0A0D2VA77_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G067700 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.2e-60
Identity = 126/222 (56.76%), Postives = 164/222 (73.87%), Query Frame = 1


Query: 1   MKITIQEHVFGAQMKS----LGLARARFLADPSKHFHMSSLDDGSQSIQKYNGKDWILNR 60
           MK  I E V G  MKS    +     R+L D +  + + S  +GS + ++   ++++L R
Sbjct: 1   MKNQILEQVIGVPMKSTLYRVERTPRRYLPDSAGQYRIPSSVEGSNTFRE-GKRNFVLKR 60

Query: 61  VHKNGRKPDNIIRALREHVKLGAKITETVKGKLRLGARIVRVGGVRKIYKKLFTVSEGEK 120
           ++  G+K D     +REHV+LG KI+ETVKGKL LGARI++VGGV KI+K+LF+V EGEK
Sbjct: 61  INNIGKKADTFAHGVREHVRLGPKISETVKGKLSLGARILQVGGVEKIFKQLFSVREGEK 120

Query: 121 LLKASQCYLSTTAGPMAGLLFISTHNIAFCSDKSIKLSSPNGEEHVRIHYKVVIPNEKVM 180
           LLKA QC+LSTTAGP+AGLLFIS+  +AFCSD+SIK+ SPNGE ++R+HYKV+IP EK+ 
Sbjct: 121 LLKACQCHLSTTAGPIAGLLFISSQKVAFCSDRSIKVPSPNGE-YLRVHYKVLIPLEKIK 180

Query: 181 RVNESENVKKASQKYIQIVTVDKFEFWFMGFLKYQSTFNSLQ 219
            VNESEN+KK SQKY++IVTVD FEFWFMGF  YQ  F  LQ
Sbjct: 181 GVNESENMKKPSQKYMEIVTVDDFEFWFMGFFNYQKAFKYLQ 220

[Close]

BLAST of CmoCh04G013400 vs. TAIR10
Match: AT5G08350.1 (AT5G08350.1 GRAM domain-containing protein / ABA-responsive protein-related)

HSP 1 Score: 196.8 bits (499), Expect = 1.4e-50
Identity = 106/195 (54.36%), Postives = 140/195 (71.79%), Query Frame = 1


Query: 24  FLADPSKHFHMSSLDDGSQSIQKYNGKDWILNRVHKNGRKPDNIIRALREHVKLGAKITE 83
           +L DP+  F+   +   S+  ++ N K  IL R     +K D     +R+  K+  K+TE
Sbjct: 23  YLPDPAS-FNKFRVPASSKKSEQSNVKS-ILKR-----KKTDGFTNGVRDQSKIRPKLTE 82

Query: 84  TVKGKLRLGARIVRVGGVRKIYKKLFTVSEGEKLLKASQCYLSTTAGPMAGLLFISTHNI 143
           TVK KL LGARI++VGG+ KI+K+LF VSEGEKL K  QCYLSTTAGP+AGLLFIS+  +
Sbjct: 83  TVKRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKM 142

Query: 144 AFCSDKSIKLSSPNGEEHVRIHYKVVIPNEKVMRVNESENVKKASQKYIQIVTVDKFEFW 203
           AFCS++SIK+ SP G + +R+HYKV IP  K+ RVN+S+N KK SQKY+++VTVD F+FW
Sbjct: 143 AFCSERSIKVDSPQG-DIIRVHYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVTVDGFDFW 202

Query: 204 FMGFLKYQSTFNSLQ 219
           FMGFL YQ  FN L+
Sbjct: 203 FMGFLSYQKAFNCLE 209

[Close]

BLAST of CmoCh04G013400 vs. TAIR10
Match: AT5G23370.1 (AT5G23370.1 GRAM domain-containing protein / ABA-responsive protein-related)

HSP 1 Score: 193.7 bits (491), Expect = 1.2e-49
Identity = 97/157 (61.78%), Postives = 124/157 (78.98%), Query Frame = 1


Query: 62  RKPDNIIRALREHVKLGAKITETVKGKLRLGARIVRVGGVRKIYKKLFTVSEGEKLLKAS 121
           +K D+    +R+  KLG K+TETVK KL LGARI+++GG+ KIYK+LF VS+ EKL KA 
Sbjct: 55  KKNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAY 114

Query: 122 QCYLSTTAGPMAGLLFISTHNIAFCSDKSIKLSSPNGEEHVRIHYKVVIPNEKVMRVNES 181
           QCYLSTTAGP+AGLLFIS+  IAFCS++SIK++SP GE + R+HYKV IP  K+  VN+S
Sbjct: 115 QCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELN-RVHYKVSIPLCKINGVNQS 174

Query: 182 ENVKKASQKYIQIVTVDKFEFWFMGFLKYQSTFNSLQ 219
           +N  K SQKY+++VTVD F+FWFMGFL YQ  FN L+
Sbjct: 175 QNTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLE 210

[Close]

BLAST of CmoCh04G013400 vs. TAIR10
Match: AT5G23350.1 (AT5G23350.1 GRAM domain-containing protein / ABA-responsive protein-related)

HSP 1 Score: 188.7 bits (478), Expect = 3.8e-48
Identity = 94/157 (59.87%), Postives = 121/157 (77.07%), Query Frame = 1


Query: 62  RKPDNIIRALREHVKLGAKITETVKGKLRLGARIVRVGGVRKIYKKLFTVSEGEKLLKAS 121
           +K D+     R+  KLG K+TETVK KL LGA+I+++GG+ KIYK+LF V + EKL KA 
Sbjct: 117 KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAY 176

Query: 122 QCYLSTTAGPMAGLLFISTHNIAFCSDKSIKLSSPNGEEHVRIHYKVVIPNEKVMRVNES 181
           QCYLSTTAGP+AGLLFIS+  IAFCS++SIK++SP G    R+HYKV IP  K+  VN+S
Sbjct: 177 QCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGVLS-RVHYKVSIPLCKINGVNQS 236

Query: 182 ENVKKASQKYIQIVTVDKFEFWFMGFLKYQSTFNSLQ 219
           +N KK SQKY++IVT+D F+FWFMGF+ YQ  FN L+
Sbjct: 237 QNTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFNCLE 272

[Close]

BLAST of CmoCh04G013400 vs. TAIR10
Match: AT5G23360.1 (AT5G23360.1 GRAM domain-containing protein / ABA-responsive protein-related)

HSP 1 Score: 183.3 bits (464), Expect = 1.6e-46
Identity = 90/157 (57.32%), Postives = 120/157 (76.43%), Query Frame = 1


Query: 62  RKPDNIIRALREHVKLGAKITETVKGKLRLGARIVRVGGVRKIYKKLFTVSEGEKLLKAS 121
           +K D+     R+  KLG K+TETVK KL LGA+I+++GG+ KIYK+LF V + EKL KA 
Sbjct: 47  KKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAY 106

Query: 122 QCYLSTTAGPMAGLLFISTHNIAFCSDKSIKLSSPNGEEHVRIHYKVVIPNEKVMRVNES 181
           QCYLSTT G +AGLLFIS+  IAFCS++SIK++SP G +  R+HYKV IP  K+  VN+S
Sbjct: 107 QCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQG-DLTRVHYKVSIPLCKINGVNQS 166

Query: 182 ENVKKASQKYIQIVTVDKFEFWFMGFLKYQSTFNSLQ 219
           +N KK SQ+Y+++VTVD ++FWFMGF+ YQ  FN L+
Sbjct: 167 QNTKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLE 202

[Close]

BLAST of CmoCh04G013400 vs. TAIR10
Match: AT4G01600.1 (AT4G01600.1 GRAM domain family protein)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-31
Identity = 68/169 (40.24%), Postives = 105/169 (62.13%), Query Frame = 1


Query: 53  ILNRVHKN----GRKPDNIIRALREHVKLGAKITETVKGKLRLGARIVRVGGVRKIYKKL 112
           +LNR  K      RK + ++  L++H+K    I++    +L  G +++  GG  +++++ 
Sbjct: 52  VLNRCGKKVEDATRKAEALVGGLKDHLKFSPSISDAAMARLSQGTKMIVEGGPERVFQRE 111

Query: 113 FTVSEGEKLLKASQCYLSTTAGPMAGLLFISTHNIAFCSDKSIKLSSPNGEEHVRIHYKV 172
           F V   EKLL +  CY+STT+GP+ G+++IS   IAFCSD +I+L S  G   V  +YKV
Sbjct: 112 FGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKV 171

Query: 173 VIPNEKVMRVNESENVKKASQKYIQIVTVDKFEFWFMGFLKYQSTFNSL 218
           V+  EK+  ++ S NV K S++Y+ +VT D FEFWFMGF+ Y   FN L
Sbjct: 172 VMEWEKISSISSSTNVLKPSERYVHMVTRDGFEFWFMGFVSYIDAFNCL 220

[Close]

BLAST of CmoCh04G013400 vs. NCBI nr
Match: gi|659131076|ref|XP_008465496.1| (PREDICTED: GEM-like protein 4 [Cucumis melo])

HSP 1 Score: 331.3 bits (848), Expect = 1.3e-87
Identity = 171/222 (77.03%), Postives = 192/222 (86.49%), Query Frame = 1


Query: 4   TIQEHVFGAQMKSLGLARARFLAD-PSKHFHMSSLDD--GSQSIQKYNGKDWILNRVHKN 63
           TIQEH+ G QM S  L+RAR+L   PSKH H+SS DD     SI+KYNGKD ILNR++KN
Sbjct: 5   TIQEHMLGFQM-SFALSRARYLGHYPSKHLHVSSSDDRISQSSIKKYNGKDCILNRLNKN 64

Query: 64  GRKPDNIIRALREHVKLGAKITETVKGKLRLGARIVRVGGVRKIYKKLFTVSEGEKLLKA 123
           G+K DNII ALREHVKLGAKI+ETVKGKL LGARI+RVGGVRKIYKKLF+++E EKLLK 
Sbjct: 65  GKKTDNIIHALREHVKLGAKISETVKGKLSLGARILRVGGVRKIYKKLFSMNEEEKLLKV 124

Query: 124 SQCYLSTTAGPMAGLLFISTHNIAFCSDKSIKLSSPNGEEHVRIHYKVVIPNEKVMRVNE 183
           SQCYLSTTAGP+AGLLFISTH IAFCSDKSIK++SPN  +H+RIHYKVVIP EKVMRVNE
Sbjct: 125 SQCYLSTTAGPLAGLLFISTHKIAFCSDKSIKIASPNNGDHIRIHYKVVIPKEKVMRVNE 184

Query: 184 SENVKKASQKYIQIVTVDKFEFWFMGFLKYQSTFNSLQALQR 223
           SENVKKAS+KYIQI T+D FEFWFMGFL YQSTFNSLQ + R
Sbjct: 185 SENVKKASEKYIQIETLDNFEFWFMGFLNYQSTFNSLQEVAR 225

[Close]

BLAST of CmoCh04G013400 vs. NCBI nr
Match: gi|778704224|ref|XP_011655497.1| (PREDICTED: GEM-like protein 4 [Cucumis sativus])

HSP 1 Score: 328.9 bits (842), Expect = 6.6e-87
Identity = 170/219 (77.63%), Postives = 191/219 (87.21%), Query Frame = 1


Query: 1   MKITIQEHVFGAQMKSLGLARARFLADPSKHFHMSSLDDGSQS-IQKYNGKDWILNRVHK 60
           MK TIQEH+ G  M SL L+RAR+L+ PS   H+SS DDG QS I+KYNGKD IL R++K
Sbjct: 1   MKTTIQEHMLGFPM-SLALSRARYLSHPSNRLHLSSSDDGFQSSIKKYNGKDCILKRLNK 60

Query: 61  NGRKPDNIIRALREHVKLGAKITETVKGKLRLGARIVRVGGVRKIYKKLFTVSEGEKLLK 120
           NG+K DNII ALREHVKLGAKI+ETVKGKL LGARI+RVGGVRKIYKKLF++SE EKLLK
Sbjct: 61  NGKKTDNIIHALREHVKLGAKISETVKGKLSLGARILRVGGVRKIYKKLFSMSEEEKLLK 120

Query: 121 ASQCYLSTTAGPMAGLLFISTHNIAFCSDKSIKLSSPNGEEHVRIHYKVVIPNEKVMRVN 180
            SQCYLSTTAGP+ GLLFISTH IAFCSDKSIK++SPNG +H+RIHYKVVIP EKVMRVN
Sbjct: 121 VSQCYLSTTAGPLPGLLFISTHKIAFCSDKSIKIASPNG-DHIRIHYKVVIPKEKVMRVN 180

Query: 181 ESENVKKASQKYIQIVTVDKFEFWFMGFLKYQSTFNSLQ 219
           ESENVKK S++YIQI T+D FEFWFMGFL YQSTFNSLQ
Sbjct: 181 ESENVKKTSERYIQIETLDNFEFWFMGFLNYQSTFNSLQ 217

[Close]

BLAST of CmoCh04G013400 vs. NCBI nr
Match: gi|778704232|ref|XP_011655499.1| (PREDICTED: GEM-like protein 4 [Cucumis sativus])

HSP 1 Score: 328.2 bits (840), Expect = 1.1e-86
Identity = 171/224 (76.34%), Postives = 191/224 (85.27%), Query Frame = 1


Query: 1   MKITIQEHVFGAQMKSLGLARARFLADPSKHFHMSSLDD--GSQSIQKYNGKDWILNRVH 60
           MK TIQEH+ G QM SL L+RAR L   SKH H+SS DD     SI+KYNGKD IL R++
Sbjct: 1   MKTTIQEHMLGFQM-SLALSRARSLGHSSKHLHVSSSDDRISQSSIKKYNGKDCILKRLN 60

Query: 61  KNGRKPDNIIRALREHVKLGAKITETVKGKLRLGARIVRVGGVRKIYKKLFTVSEGEKLL 120
           KNG+K DNII ALREHVKLGAKI+ETVKGKL LGARI+RVGGVRKIYKKLF++SE EKLL
Sbjct: 61  KNGKKTDNIIHALREHVKLGAKISETVKGKLSLGARILRVGGVRKIYKKLFSMSEEEKLL 120

Query: 121 KASQCYLSTTAGPMAGLLFISTHNIAFCSDKSIKLSSPNGEEHVRIHYKVVIPNEKVMRV 180
           K SQCYLSTTAGP+ GLLFISTH IAFCSDKSIK++SPNG +H+RIHYKVVIP EKVMRV
Sbjct: 121 KVSQCYLSTTAGPLPGLLFISTHKIAFCSDKSIKIASPNG-DHIRIHYKVVIPKEKVMRV 180

Query: 181 NESENVKKASQKYIQIVTVDKFEFWFMGFLKYQSTFNSLQALQR 223
           NESENVKK S++YIQI T+D FEFWFMGFL YQSTFNSLQ + R
Sbjct: 181 NESENVKKTSERYIQIETLDNFEFWFMGFLNYQSTFNSLQEVAR 222

[Close]

BLAST of CmoCh04G013400 vs. NCBI nr
Match: gi|778704235|ref|XP_011655500.1| (PREDICTED: GEM-like protein 7 [Cucumis sativus])

HSP 1 Score: 327.0 bits (837), Expect = 2.5e-86
Identity = 167/219 (76.26%), Postives = 189/219 (86.30%), Query Frame = 1


Query: 1   MKITIQEH-VFGAQMKSLGLARARFLADPSKHFHMSSLDDGSQSIQKYNGKDWILNRVHK 60
           MK TIQE  V G QMKSLGLARAR L DPSK+ H+SS DDGSQSI+KYNGKD ILNR++K
Sbjct: 1   MKTTIQEQIVLGIQMKSLGLARARLLGDPSKYLHISSSDDGSQSIKKYNGKDCILNRLNK 60

Query: 61  NGRKPDNIIRALREHVKLGAKITETVKGKLRLGARIVRVGGVRKIYKKLFTVSEGEKLLK 120
           NG+K DNII ALREHVKLGAKI+ETVKGKL LGARI+RVGGVRKIYKKLF++SE EKLLK
Sbjct: 61  NGKKTDNIIHALREHVKLGAKISETVKGKLSLGARILRVGGVRKIYKKLFSMSEEEKLLK 120

Query: 121 ASQCYLSTTAGPMAGLLFISTHNIAFCSDKSIKLSSPNGEEHVRIHYKVVIPNEKVMRVN 180
            SQCYLSTTAGP+ GLLFISTH IAFCSDKSIK++SPNG +H+RIHYKV IP  K+ RV 
Sbjct: 121 VSQCYLSTTAGPLPGLLFISTHKIAFCSDKSIKIASPNG-DHIRIHYKVTIPLGKITRVF 180

Query: 181 ESENVKKASQKYIQIVTVDKFEFWFMGFLKYQSTFNSLQ 219
           +SENVK  S+KY++IVTVD +EFWFMGFL Y  +FN LQ
Sbjct: 181 QSENVKNPSEKYMEIVTVDNYEFWFMGFLNYHKSFNCLQ 218

[Close]

BLAST of CmoCh04G013400 vs. NCBI nr
Match: gi|659090211|ref|XP_008445894.1| (PREDICTED: GEM-like protein 4 [Cucumis melo])

HSP 1 Score: 325.1 bits (832), Expect = 9.6e-86
Identity = 168/219 (76.71%), Postives = 191/219 (87.21%), Query Frame = 1


Query: 1   MKITIQEHVFGAQMKSLGLARARFLADPSKHFHMSSLDDGSQS-IQKYNGKDWILNRVHK 60
           MK TIQEH+ G QM SL L+RAR+L  P K  H+SS DDGSQS I+KYNGKD ILNR++ 
Sbjct: 1   MKTTIQEHMLGFQM-SLALSRARYLGHPLKRLHLSSSDDGSQSSIKKYNGKDCILNRLNT 60

Query: 61  NGRKPDNIIRALREHVKLGAKITETVKGKLRLGARIVRVGGVRKIYKKLFTVSEGEKLLK 120
           NG++ DNII ALREHVKLG KI+E VKGKL LGA+I+RVGG+RKIYKKLF+++E EKLLK
Sbjct: 61  NGKRTDNIIHALREHVKLGGKISEAVKGKLSLGAKILRVGGLRKIYKKLFSMNEEEKLLK 120

Query: 121 ASQCYLSTTAGPMAGLLFISTHNIAFCSDKSIKLSSPNGEEHVRIHYKVVIPNEKVMRVN 180
            SQCYLSTTAGP+AGLLFISTH IAFCSDKSIK++SPNG +H+RI YKVVIP EKVMRVN
Sbjct: 121 VSQCYLSTTAGPLAGLLFISTHKIAFCSDKSIKIASPNG-DHIRILYKVVIPKEKVMRVN 180

Query: 181 ESENVKKASQKYIQIVTVDKFEFWFMGFLKYQSTFNSLQ 219
           ESENVKKAS+KYIQI T+D FEFWFMGFL YQSTFNSLQ
Sbjct: 181 ESENVKKASEKYIQIETLDNFEFWFMGFLNYQSTFNSLQ 217

The following BLAST results are available for this feature:

BLAST of CmoCh04G013400 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GEML4_ARATH	2.5e-49	54.36	GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1	[more]
GEML8_ARATH	2.1e-48	61.78	Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370 PE=3 SV=1	[more]
GEML6_ARATH	6.7e-47	59.87	GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2	[more]
GEML7_ARATH	2.8e-45	57.32	GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1	[more]
GEML2_ARATH	2.0e-30	40.24	GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g01600 PE=2 SV=1	[more]

BLAST of CmoCh04G013400 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV22_CUCSA	1.8e-86	76.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G578990 PE=4 SV=1	[more]
A0A0A0KPM2_CUCSA	4.1e-83	78.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G579030 PE=4 SV=1	[more]
A0A0A0KT32_CUCSA	3.4e-82	77.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G579000 PE=4 SV=1	[more]
A0A0A0KRR9_CUCSA	6.3e-68	65.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G579020 PE=4 SV=1	[more]
A0A0D2VA77_GOSRA	2.2e-60	56.76	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G067700 PE=4 SV=1	[more]

BLAST of CmoCh04G013400 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08350.1	1.4e-50	54.36	GRAM domain-containing protein / ABA-responsive protein-related	[more]
AT5G23370.1	1.2e-49	61.78	GRAM domain-containing protein / ABA-responsive protein-related	[more]
AT5G23350.1	3.8e-48	59.87	GRAM domain-containing protein / ABA-responsive protein-related	[more]
AT5G23360.1	1.6e-46	57.32	GRAM domain-containing protein / ABA-responsive protein-related	[more]
AT4G01600.1	1.1e-31	40.24	GRAM domain family protein	[more]

BLAST of CmoCh04G013400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131076\|ref\|XP_008465496.1\|	1.3e-87	77.03	PREDICTED: GEM-like protein 4 [Cucumis melo]	[more]
gi\|778704224\|ref\|XP_011655497.1\|	6.6e-87	77.63	PREDICTED: GEM-like protein 4 [Cucumis sativus]	[more]
gi\|778704232\|ref\|XP_011655499.1\|	1.1e-86	76.34	PREDICTED: GEM-like protein 4 [Cucumis sativus]	[more]
gi\|778704235\|ref\|XP_011655500.1\|	2.5e-86	76.26	PREDICTED: GEM-like protein 7 [Cucumis sativus]	[more]
gi\|659090211\|ref\|XP_008445894.1\|	9.6e-86	76.71	PREDICTED: GEM-like protein 4 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004182	GRAM

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G013400.1	CmoCh04G013400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004182	GRAM domain	PFAM	PF02893	GRAM	coord: 105..180 score: 7.9
IPR004182	GRAM domain	SMART	SM00568	gram2001c	coord: 103..182 score: 3.8
None	No IPR available	PANTHER	PTHR31969	FAMILY NOT NAMED	coord: 41..218 score: 1.0E
None	No IPR available	PANTHER	PTHR31969:SF1	GEM-LIKE PROTEIN 4-RELATED	coord: 41..218 score: 1.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G013400	CmaCh04G022390	Cucurbita maxima (Rimu)	cmacmoB744

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G013400	Cucumber (Gy14) v2	cgybcmoB628
CmoCh04G013400	Melon (DHL92) v3.6.1	cmomedB711
CmoCh04G013400	Melon (DHL92) v3.6.1	cmomedB734
CmoCh04G013400	Silver-seed gourd	carcmoB0987
CmoCh04G013400	Silver-seed gourd	carcmoB1138
CmoCh04G013400	Cucumber (Chinese Long) v3	cmocucB0849
CmoCh04G013400	Watermelon (97103) v2	cmowmbB713
CmoCh04G013400	Wax gourd	cmowgoB0891
CmoCh04G013400	Wax gourd	cmowgoB0905
CmoCh04G013400	Cucurbita moschata (Rifu)	cmocmoB336
CmoCh04G013400	Cucurbita moschata (Rifu)	cmocmoB470
CmoCh04G013400	Cucumber (Gy14) v1	cgycmoB0774
CmoCh04G013400	Cucurbita maxima (Rimu)	cmacmoB420
CmoCh04G013400	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G013400	Wild cucumber (PI 183967)	cmocpiB725
CmoCh04G013400	Cucumber (Chinese Long) v2	cmocuB717
CmoCh04G013400	Melon (DHL92) v3.5.1	cmomeB623
CmoCh04G013400	Melon (DHL92) v3.5.1	cmomeB644
CmoCh04G013400	Watermelon (Charleston Gray)	cmowcgB643
CmoCh04G013400	Watermelon (97103) v1	cmowmB719
CmoCh04G013400	Cucurbita pepo (Zucchini)	cmocpeB651
CmoCh04G013400	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G013400	Bottle gourd (USVL1VR-Ls)	cmolsiB669