CmoCh04G012900 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G012900
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionViolaxanthin de-epoxidase, chloroplastic
LocationCmo_Chr04 : 6541878 .. 6542726 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGCTTGTAGCGGCGAGCACACGGTATTCTTTAGTAAAAGGCGAAAGAATAGTTCGCTTTGTGCTCACCGCACGGCTCCGTGCTTTCTCACTAAGACGTTGGCGCCTTTATATAGGTGCTGGATATGTGTACTACAATGAATTTCTTCGATGTGGGAGCTTGTCAGCAAGTTATATCAATTTCTTTATAAAATAAGAATTCCCATTTGTTAAAAACTGAAAATTCATATGCATTGCAAAAAACACCTCTTCTTGAGTAACCATTTATGGTTTTATTTTAGTTTTAATTTGTAGTATGTTTAAAATAAAATTTTAAATCATTGACAATGTATTTTTTAACCCTATTATATGATTCATATTTAAAGTTAATTTGAACCTAATTTAATTAGTTAACACGTATTTTCGATCCAAAAGGTAAGGGATCGAATCCTTCCACTCCATTTTTTTTAAACGTGATTAAGTCTAAAATATAAAAAACTATAGAAAACGAAATTTATATATTTTTTTTCCCTTATAGATTCCAAAGTCACCCAACCATGCGACTAAATCCAACCTGAATAAATGATTGAAACAAGTTGAGTTGTAGATTCAATTCGGGTAATTCGTATCACCAATCCAATTAGCTAAATAAGGGTGTATAGACTATTCATTATTTTCGTCTTGTTTTCACGACTTCTAAAACTATATTGGCAGTCAGGACTTCGATGTTCAGTTTTGTTTTAATTATTTTCAATAAAGTATAATAAACCACACATGGTCTTATTAGTTTTTTTTTTGTTTTTTTTATTCTATGATTCTTTAATAAGATTCCATTCAAAAATCCCAAAGATCTTGTGTATCTAAGTAG

mRNA sequence

ATGCCGCTTGTAGCGGCGAGCACACGGTATTCTTTAGTAAAAGGCGAAAGAATAGTTCGCTTTGTGCTCACCGCACGGCTCCGTGCTTTCTCACTAAGACGTTGGCGCCTTTATATAGGTGCTGGATATGTGTACTACAATGAATTTCTTCGATGTGGGAGCTTGTCAGCAAATTCCATTCAAAAATCCCAAAGATCTTGTGTATCTAAGTAG

Coding sequence (CDS)

ATGCCGCTTGTAGCGGCGAGCACACGGTATTCTTTAGTAAAAGGCGAAAGAATAGTTCGCTTTGTGCTCACCGCACGGCTCCGTGCTTTCTCACTAAGACGTTGGCGCCTTTATATAGGTGCTGGATATGTGTACTACAATGAATTTCTTCGATGTGGGAGCTTGTCAGCAAATTCCATTCAAAAATCCCAAAGATCTTGTGTATCTAAGTAG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G012900.1CmoCh04G012900.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G012900CmaCh04G012170Cucurbita maxima (Rimu)cmacmoB728
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G012900Cucumber (Chinese Long) v3cmocucB0815
CmoCh04G012900Cucumber (Chinese Long) v3cmocucB0840
CmoCh04G012900Cucumber (Chinese Long) v3cmocucB0872
CmoCh04G012900Cucumber (Chinese Long) v3cmocucB0887
CmoCh04G012900Cucumber (Chinese Long) v3cmocucB0907
CmoCh04G012900Watermelon (97103) v2cmowmbB692
CmoCh04G012900Watermelon (97103) v2cmowmbB713
CmoCh04G012900Watermelon (97103) v2cmowmbB715
CmoCh04G012900Watermelon (97103) v2cmowmbB724
CmoCh04G012900Watermelon (97103) v2cmowmbB769
CmoCh04G012900Wax gourdcmowgoB0820
CmoCh04G012900Wax gourdcmowgoB0875
CmoCh04G012900Wax gourdcmowgoB0878
CmoCh04G012900Wax gourdcmowgoB0891
CmoCh04G012900Cucurbita moschata (Rifu)cmocmoB258
CmoCh04G012900Cucurbita moschata (Rifu)cmocmoB434
CmoCh04G012900Cucurbita moschata (Rifu)cmocmoB450
CmoCh04G012900Cucurbita moschata (Rifu)cmocmoB464
CmoCh04G012900Cucumber (Gy14) v1cgycmoB0475
CmoCh04G012900Cucurbita maxima (Rimu)cmacmoB306
CmoCh04G012900Cucurbita maxima (Rimu)cmacmoB730
CmoCh04G012900Wild cucumber (PI 183967)cmocpiB746
CmoCh04G012900Wild cucumber (PI 183967)cmocpiB756
CmoCh04G012900Cucumber (Chinese Long) v2cmocuB736
CmoCh04G012900Cucumber (Chinese Long) v2cmocuB750
CmoCh04G012900Melon (DHL92) v3.5.1cmomeB622
CmoCh04G012900Melon (DHL92) v3.5.1cmomeB644
CmoCh04G012900Watermelon (Charleston Gray)cmowcgB606
CmoCh04G012900Watermelon (Charleston Gray)cmowcgB643
CmoCh04G012900Watermelon (97103) v1cmowmB645
CmoCh04G012900Watermelon (97103) v1cmowmB719
CmoCh04G012900Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G012900Cucurbita pepo (Zucchini)cmocpeB675
CmoCh04G012900Cucurbita pepo (Zucchini)cmocpeB706
CmoCh04G012900Bottle gourd (USVL1VR-Ls)cmolsiB620
CmoCh04G012900Bottle gourd (USVL1VR-Ls)cmolsiB637
CmoCh04G012900Bottle gourd (USVL1VR-Ls)cmolsiB653
CmoCh04G012900Bottle gourd (USVL1VR-Ls)cmolsiB669
CmoCh04G012900Cucumber (Gy14) v2cgybcmoB387
CmoCh04G012900Cucumber (Gy14) v2cgybcmoB531
CmoCh04G012900Cucumber (Gy14) v2cgybcmoB651
CmoCh04G012900Cucumber (Gy14) v2cgybcmoB666
CmoCh04G012900Melon (DHL92) v3.6.1cmomedB712
CmoCh04G012900Melon (DHL92) v3.6.1cmomedB734
CmoCh04G012900Melon (DHL92) v3.6.1cmomedB767
CmoCh04G012900Melon (DHL92) v3.6.1cmomedB799
CmoCh04G012900Silver-seed gourdcarcmoB0368
CmoCh04G012900Silver-seed gourdcarcmoB0423
CmoCh04G012900Silver-seed gourdcarcmoB1168