CmoCh04G011000 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G011000
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionIntegrator complex subunit 7
LocationCmo_Chr04 : 5598374 .. 5602804 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGTGGTGTCGCCGCCGGCCGGGAGTGCCTCCGCGTTACAACAAGGTCACTAGTTTCTATCTTTTTTCGCCTCTTTGCTTTTCGCCGCTGCAAATTTTGGTCGGACTTGGTGGTTGATTGGCTCATTGAGAGCTTACTTAACCTTCGTGATTTTCTGCCTTATCATTGTAGTTCAACAATCATTGTTTGGTAAGGCTCGAAGTTTGAAGATTTGGGTACCGAATTTAGCGTTTTTTTTTTTATTCGCTGGGACTATTTGGTGATGCTTTCGTAAAGGGGTCTGGGGCGTTCGAGTGCATGTGTGACTGCTATTGGTTTGAGTATCTGCATCACATGGAGAGAAATGCTGCAGCTTGTGCTATGGAATGGAGTATTGAGCTGGAGAAGGCTCTTCGTTCAAAGAAACCAGGTTCGTCAATCGTCTGACTGATCTATGTTCTTTAATTTCAAACGAAAGTTACTAGGCTAGCTTCTAAAAAAGGGAGAGAGAAAAGAAACGATAGTTAGGAATCACGACTCTCCACAGTGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGACTTTGATTTGAGCTTCCCAAAAGACCTCGTACCAACAGTGATGTATTCCTTACTTGTAATCCCATTATAATTTCCTAAATTAACCAACGTGGGACTCCCCCAACAATCCTCAGCAATCCTCCCCTCGAACAAAGTACACTATAGAGCCTCTCCTGAGGCCTATGGAGCCCTCGAACAAAGTATACCCCTTGTTCGACACTTGAGTCACTTTTGACTATACCTTCGAGGCTCACAACTTCTTTGTTCGACATTTGAGGATTCTATTGACATGGCTAAGTTAAGGGTATGACTCTGATACCATGTTAGAAATCACGACTCTCCAAAATGGTATGATATTGTCTACTATGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCAAAAGGCCTCATACCAATGGAGATGTATTCCTTACCTATAAACCTAAACCCATGATCATTCCCTAAATTATCCAACGTGGGACTCCCTCCCAATCATCCTCAATATTACTGTCACAAAAGCTGCTTGTCAATTGATCCCTCATCGGCTGAGCATCTCCATTGAACTAAAAACAACATTGGTGCCTACTTTGGGGTTGGAGCACAGTAATAGCACTGTCTTAATGAAATATAATACTTGTAATTTGTGGTTTATTCAGGTCGGGCTGTTGAAGCTATACTTCAGATTGGATCTCGACTTCAGCAATGGAGTAGAGAGCCAGAGCCAAATATAGCAGTATATAATATGTTTGACCTTGTTACTTGGGAGGATAGGCTATTTTCCAACACTATTCTCCTACGGCTTGCCGATGCGTTTAAGTCTGATGACAAACATATTAGAGTTGCAGTTGTTAAGGTATTCTTATCCGAGCTCAATAGCCGTGACAGGACAAAAAGTAAACAATACCAAGGGGTTCTTTCAAAGGCCAGAGTGCAAAACCACCATGAATTACTGACTCGAGTAAAGGTTGTTCTTGGTGGAGGGGATCCTGAGGCTAGGGCTCTAGCTTTGATTCTATTAGGATGTTGGGCACATTTTGCAGAAGGCAGTGCCCAGATACGTTATATGATACTTTCTAGCATGCTATCTTCTCATATTTCGGAGGTTAGTGCTGTATACATTTTATTTTCTTCTCAAAATTTAATCTTTTATGACAATTTTAGTTTATGTTGTCCAACTGGGTTCAGTATATAAATTCCCTTATGACGAAAGAATGTTTAAGAAAAGCTTTCATTTCCTCAATAAGAGTTTCCTCAATAAGAGTTTCGTATTTGGCATTGTATCATTATGTAATGAACCTAACTCGAAATCGTTCTTATGGGTATGCACCATGTGAGGAAAAGTAATCCATACTCAATGTACTTATAACACACACGAGGTCCTGCATAAAAACCATGGGGCCGTTGGATGATGCATACAGCACTTCCATGTTATCATGATATACATTCTCTACGAGACTAGCATACATAATCATGACATTTCTAACATACTTTATAACATATTTCAACTCATGGTGCCTCGAGAATCACACATGTTCATAAGATTCACATGCATGGAAGTACGATACATCAAATAAAACATACATAGTTATATCATTATCATATATCACGTAATAAACAAGTATGATACAATAATTTTATCCAACCAGCCCATAGGCATCCCAATAGGGTCCACGTACAGTTTTAGGTTCACTTGATGCTCCTAAGCTTGCCTTGTTTGAATATTCTTAGGTTTAGCTTCACGTAATCCAATTTTACCTACAATATTCCTTCCACTCAGAAAATTGAGTTTTGAGCCTACTTGTGGAGCCAAATCCTTTCACTATCCTTAAATCAGTGTGAAATATTATTAGTGGTCCAAAACAGTAGTCGTACGGACATTTTTGGGCTTAATTTGGTCAAAAGCACTCCCGGAATGATCGAAAACGATTCAAACTAGCCAACCGAAACAAGAAAGCCGACCAAATATTCTTTTTCTCAACTATAACACGTATGCCCTGGACTTGGAAGCAAATTCATCTTCTTGATTGAGAATAAGTTTCATAAATAATTTATGTAAGGGTTTTGGGGTAGAGACTGGATTGTTTGTTTAGTGGACTCATTCCTCGATAAAACTAGCAGTAAGCTAAAATGTAGTTCATAGAGGCCAAAATAATTTTAATTATAGTATTTAGAAAATTGTTGTGGATGCTCTCAAGGAAAAATCAATTACCTTAACCTACTAAATCTTGTACCGTCTTTGACAATTTCGTTTAAGGTTTAGCATTGATTTATTTTGTGTTGTGTTCTATTAGTGGATTATTAGGAAATTTAACGAAGTGTATGTAAAGCCAAACCCAATTTTATGTATTCTGGACATTCCTGTTTAAGAGGAGATTCCTTCTCCATCCTATACACTATAATTGCATGATTCCTTAATAAACCTGTCTACACAAAATTTTGAACATATTTTAAACTAAGGATATCCTCTTTTACAGGTTAAAGCATCTATATTTGCTGCAGCATGCATTAGTCAGTTAGCAGATGACTTTGCGCAAGTCTTCTTAGCGATTTTGGTTAATATAATGACTTCTACTACATCCTTGGCCATCAAAATGGCTGGAGCTCGAGTGTTCGCGAAATTGGGATGCTCACATTCAATGGCCAAAACGGCTTACAAGGTTATGCTCATCTTTTGATTTATTTTGAATTCAAATAGAGTTCTGAGTCTTTGAGATGATAATATTGATCATGAAGTCTTAACTTGGCCTTGAAAAAGGTGGCATGTCTTATTGTTTTGTAATACTATCTCATATTGAAGTCGAGGGAGTGAAAAGTTGGCTTTGGTCAATGATGTAAGCTCAGCAAATTGCTCCACTTCTCCTTAATAGTTATTATGAAGAACCAAAGTGGTACATCCAGTTCTACAGCCTTCTTGTATTAAACATATGGATACTAACTTTGACACTGAAACGTACTTCAGATTGTATCTCGACTTTGGCAATGGAGAAAGTATTAATGATTAATCCAATATTACATGGACTGGAACAGTATGCTGTATTGTTATTGAATTTCGGAGTTACTTTTCTATTGTTGATGCTCGTTTATCTTTGAACTTCATCAGCCAGATAATTTTAAATCGCTTCCCTGACCGCCTATCTTATGAGTCCATTCTTGTCTTGTTGGTTTGTTGTATTATTTTGTACCTCTCTCGGGGTTCAAAGATTGCTTTGTCGAATGGGCTGGCCTTTTAGAGAGCAGTAGAATGTTGGGTTAGCTCTGCCTTGATGTGATAGGGGGGTGAGAGGAATTGATGAAGAAATGTCGGAGTATGCATGCGACCAATTTTTTCAAGAATCTGCATGCATAAAAAAATATTACTGTGCTGATTATGACTTGACATGGTTTTTAACTATCTAATTATTGTAGGCTGGACTCGAGCTCGCCTCAAACTCTAGTGAAGAGGATTTTTTGGTTGCAATGTTATTTTCTCTATCCAAACTGGCTTCGAAGTCAGTATTTATTAGTTCTGAGCAGGTAACTATTCTTCTTAGATGATGGTTGCTTTTGGACGCATTGTAGGATTTTGATCTTCTTAATCATAGTAGGAATGTTATTACTTGTTTACGATGTCCCAACGCAGGTGAAATTTCTTTGCTCGTTTCTTAGCGACAAAAAGTCTGCGCGTGTGCAAGAAACATCTTTAAGATGTTTGCGTTTTATTTTCATGAAAGGAGAATGCCTGTTTACTAATATGGAATCTGTGGTCAGAATTTTAGTTGATGCACTGGATGAACCCATGCTAACGACTACGTCACATTGTGACGTTCTACGGCTGTTGCGAAAGGTCATTCCTGAGCTTAAATGGATGAACTCATGTTTAAGTTTTGATCTTGAAATATGTTGA

mRNA sequence

CCGTGGTGTCGCCGCCGGCCGGGAGTGCCTCCGCGTTACAACAAGTTCAACAATCATTGTTTGGTAAGGCTCGAAGTTTGAAGATTTGGGTACCGAATTTAGCGTTTTTTTTTTTATTCGCTGGGACTATTTGGTGATGCTTTCGTAAAGGGGTCTGGGGCGTTCGAGTGCATGTGTGACTGCTATTGGTTTGAGTATCTGCATCACATGGAGAGAAATGCTGCAGCTTGTGCTATGGAATGGAGTATTGAGCTGGAGAAGGCTCTTCGTTCAAAGAAACCAGGTCGGGCTGTTGAAGCTATACTTCAGATTGGATCTCGACTTCAGCAATGGAGTAGAGAGCCAGAGCCAAATATAGCAGTATATAATATGTTTGACCTTGTTACTTGGGAGGATAGGCTATTTTCCAACACTATTCTCCTACGGCTTGCCGATGCGTTTAAGTCTGATGACAAACATATTAGAGTTGCAGTTGTTAAGGTATTCTTATCCGAGCTCAATAGCCGTGACAGGACAAAAAGTAAACAATACCAAGGGGTTCTTTCAAAGGCCAGAGTGCAAAACCACCATGAATTACTGACTCGAGTAAAGGTTGTTCTTGGTGGAGGGGATCCTGAGGCTAGGGCTCTAGCTTTGATTCTATTAGGATGTTGGGCACATTTTGCAGAAGGCAGTGCCCAGATACGTTATATGATACTTTCTAGCATGCTATCTTCTCATATTTCGGAGGTTAAAGCATCTATATTTGCTGCAGCATGCATTAGTCAGTTAGCAGATGACTTTGCGCAAGTCTTCTTAGCGATTTTGGTTAATATAATGACTTCTACTACATCCTTGGCCATCAAAATGGCTGGAGCTCGAGTGTTCGCGAAATTGGGATGCTCACATTCAATGGCCAAAACGGCTTACAAGGCTGGACTCGAGCTCGCCTCAAACTCTAGTGAAGAGGATTTTTTGGTTGCAATGTTATTTTCTCTATCCAAACTGGCTTCGAAGTCAGTATTTATTAGTTCTGAGCAGGATTTTGATCTTCTTAATCATAGAATGTTATTACTTGTTTACGATGTCCCAACGCAGGTGAAATTTCTTTGCTCGTTTCTTAGCGACAAAAAGTCTGCGCGTGTGCAAGAAACATCTTTAAGATGTTTGCGTTTTATTTTCATGAAAGGAGAATGCCTGTTTACTAATATGGAATCTGTGGTCAGAATTTTAGTTGATGCACTGGATGAACCCATGCTAACGACTACGTCACATTGTGACGTTCTACGGCTGTTGCGAAAGGTCATTCCTGAGCTTAAATGGATGAACTCATGTTTAAGTTTTGATCTTGAAATATGTTGA

Coding sequence (CDS)

ATGTGTGACTGCTATTGGTTTGAGTATCTGCATCACATGGAGAGAAATGCTGCAGCTTGTGCTATGGAATGGAGTATTGAGCTGGAGAAGGCTCTTCGTTCAAAGAAACCAGGTCGGGCTGTTGAAGCTATACTTCAGATTGGATCTCGACTTCAGCAATGGAGTAGAGAGCCAGAGCCAAATATAGCAGTATATAATATGTTTGACCTTGTTACTTGGGAGGATAGGCTATTTTCCAACACTATTCTCCTACGGCTTGCCGATGCGTTTAAGTCTGATGACAAACATATTAGAGTTGCAGTTGTTAAGGTATTCTTATCCGAGCTCAATAGCCGTGACAGGACAAAAAGTAAACAATACCAAGGGGTTCTTTCAAAGGCCAGAGTGCAAAACCACCATGAATTACTGACTCGAGTAAAGGTTGTTCTTGGTGGAGGGGATCCTGAGGCTAGGGCTCTAGCTTTGATTCTATTAGGATGTTGGGCACATTTTGCAGAAGGCAGTGCCCAGATACGTTATATGATACTTTCTAGCATGCTATCTTCTCATATTTCGGAGGTTAAAGCATCTATATTTGCTGCAGCATGCATTAGTCAGTTAGCAGATGACTTTGCGCAAGTCTTCTTAGCGATTTTGGTTAATATAATGACTTCTACTACATCCTTGGCCATCAAAATGGCTGGAGCTCGAGTGTTCGCGAAATTGGGATGCTCACATTCAATGGCCAAAACGGCTTACAAGGCTGGACTCGAGCTCGCCTCAAACTCTAGTGAAGAGGATTTTTTGGTTGCAATGTTATTTTCTCTATCCAAACTGGCTTCGAAGTCAGTATTTATTAGTTCTGAGCAGGATTTTGATCTTCTTAATCATAGAATGTTATTACTTGTTTACGATGTCCCAACGCAGGTGAAATTTCTTTGCTCGTTTCTTAGCGACAAAAAGTCTGCGCGTGTGCAAGAAACATCTTTAAGATGTTTGCGTTTTATTTTCATGAAAGGAGAATGCCTGTTTACTAATATGGAATCTGTGGTCAGAATTTTAGTTGATGCACTGGATGAACCCATGCTAACGACTACGTCACATTGTGACGTTCTACGGCTGTTGCGAAAGGTCATTCCTGAGCTTAAATGGATGAACTCATGTTTAAGTTTTGATCTTGAAATATGTTGA
BLAST of CmoCh04G011000 vs. TrEMBL
Match: A0A0A0KJG8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G083800 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 5.2e-110
Identity = 210/238 (88.24%), Postives = 223/238 (93.70%), Query Frame = 1

Query: 13  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVT 72
           MER++AACAMEWSIELEKALR KKPGRAVEAI QIG RLQQWSREPEPN+AVYNMFDLVT
Sbjct: 1   MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT 60

Query: 73  WEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSRDRTKSKQYQGVLSKARVQNH 132
           WEDRLFSNTILLRLADAFK DDKHIR+AVV+VFLSEL SRD ++SKQYQG+LSKARVQNH
Sbjct: 61  WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNH 120

Query: 133 HELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIF 192
           HELLTRVKVVL GGDPEAR LALILLGCWAHFA+ SAQIRY+I SS+ SSH+SEVKASIF
Sbjct: 121 HELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIF 180

Query: 193 AAACISQLADDFAQVFLAILVNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGL 251
           AAACI QLADDFAQVFLAILVNIMTSTTSL I+MAGARVFAKLGCSHSMAKTAYK  L
Sbjct: 181 AAACICQLADDFAQVFLAILVNIMTSTTSLTIRMAGARVFAKLGCSHSMAKTAYKVML 238

BLAST of CmoCh04G011000 vs. TrEMBL
Match: A0A067GPN8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001104mg PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 7.3e-96
Identity = 200/362 (55.25%), Postives = 259/362 (71.55%), Query Frame = 1

Query: 13  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVT 72
           MERNA ACAMEWSIELEK LRSK PGR VEAILQI  RL+QW+ EPE  + VYNMF LV 
Sbjct: 1   MERNATACAMEWSIELEKGLRSKIPGRCVEAILQIEPRLKQWAGEPEATMVVYNMFGLVP 60

Query: 73  WEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLS-ELNSRDRTKSKQYQGVLSKARVQN 132
            E+RLF+NTI LRLA+AF+   KHIRV++V+VFLS   + RD+ +SK+ +G+LSK+RV N
Sbjct: 61  GEERLFANTIFLRLAEAFQLGHKHIRVSIVRVFLSLRRHCRDKKRSKRIKGILSKSRVHN 120

Query: 133 HHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASI 192
           H ELL RVK+V   GDPE+RALAL+L GCWA FA+ SA IRY++LSS++SS++ EV+AS+
Sbjct: 121 HLELLKRVKIVFDTGDPESRALALVLFGCWADFAKDSAHIRYLVLSSLVSSNVLEVRASL 180

Query: 193 FAAACISQLADDFAQVFLAILVNIMT-STTSLAIKMAGARVFAKLGCSHSMAKTAYKAGL 252
           FAA C S+LADDFA V L +LVN++T S T   +++A ARVFAK+GCS+S+AK AYK GL
Sbjct: 181 FAAGCFSELADDFASVLLEMLVNLVTYSETESTVRIAAARVFAKMGCSYSVAKRAYKTGL 240

Query: 253 ELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSFL 312
           +L  +SS+EDFLVAML SLSKLA KS  + SEQ                   V FL   L
Sbjct: 241 KLVLDSSDEDFLVAMLTSLSKLAYKSTLLISEQ-------------------VDFLLHLL 300

Query: 313 SDKKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRK 372
           + +K+  +Q T+LRCL   F+KG        ++ R L + ++E  L +T  C+ L+LL K
Sbjct: 301 NREKALHIQATALRCLYLTFVKGMGQSLISATLFRALFNIVEEAELPSTMQCEALKLLHK 343

BLAST of CmoCh04G011000 vs. TrEMBL
Match: B9T1M5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0122800 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 4.4e-93
Identity = 195/362 (53.87%), Postives = 259/362 (71.55%), Query Frame = 1

Query: 13  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVT 72
           MER +AACAMEWSIELEK+LRSK+PG+AV+AI Q G+RLQQWSREP+P +AVY++F LV 
Sbjct: 1   MERISAACAMEWSIELEKSLRSKRPGQAVKAIQQFGARLQQWSREPKPTMAVYHIFGLVM 60

Query: 73  WEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSRDR-TKSKQYQGVLSKARVQN 132
            EDR+F+NTI LRLAD F+  D+  R+++V VFLSE  +  +  K ++Y+G+LSK R+ N
Sbjct: 61  GEDRVFANTIFLRLADVFRLGDRDTRLSIVSVFLSEFRNHVKGKKGRRYEGILSKDRIHN 120

Query: 133 HHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASI 192
           H ELL RVK+V   GD E+RA+AL+L GCWA FA+ SA IRY+ILSS++SS I EVKAS+
Sbjct: 121 HMELLKRVKIVYDTGDVESRAMALVLFGCWADFAKDSAHIRYLILSSLVSSEILEVKASL 180

Query: 193 FAAACISQLADDFAQVFLAILVNIMTST-TSLAIKMAGARVFAKLGCSHSMAKTAYKAGL 252
           FAA+C  +LA DFA V L +L NIM S  TSL I++AG RV AK+G S+S A +AYK GL
Sbjct: 181 FAASCFCELAADFAYVVLEMLPNIMLSPDTSLTIRLAGVRVIAKMGSSYSTANSAYKIGL 240

Query: 253 ELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSFL 312
           +L S SSEEDFLVA+L SLSKLA++S F+ SEQ                   V  L SFL
Sbjct: 241 KLLSGSSEEDFLVAVLVSLSKLANRSTFLLSEQ-------------------VNLLWSFL 300

Query: 313 SDKKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRK 372
           S  ++ R+Q T+LRCL F+++KG C       V++IL+  +D+  L +T   + L++  K
Sbjct: 301 SSGRTLRLQATALRCLHFMYVKGVCQSPVNSHVIKILLRIIDDIELPSTMQYEALQISHK 343

BLAST of CmoCh04G011000 vs. TrEMBL
Match: D7SVD9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0068g00700 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 4.9e-92
Identity = 196/363 (53.99%), Postives = 253/363 (69.70%), Query Frame = 1

Query: 13  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVT 72
           MER +AACAMEWSI+LEK LRSK  G  VEAILQIG RL+QW+REPEP + VY MF LV 
Sbjct: 1   MERISAACAMEWSIDLEKGLRSKVAGGPVEAILQIGQRLEQWNREPEPTLPVYKMFGLVP 60

Query: 73  WEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSRDRTK---SKQYQGVLSKARV 132
            EDRLF+N ILLRLA+AF+  D  +R +VV+VFLS L SR++ K    K Y G+LSK RV
Sbjct: 61  GEDRLFANAILLRLAEAFRVGDHSVRHSVVRVFLS-LRSRNKNKYNGGKNY-GILSKHRV 120

Query: 133 QNHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKA 192
            N  +LL+RVK+V   GD ++RAL L+L GCWA FA+ SA+IRY+ILSS++SSH+ EV+A
Sbjct: 121 HNQSQLLSRVKIVFDSGDVQSRALTLVLFGCWADFAKDSAEIRYIILSSLVSSHVVEVRA 180

Query: 193 SIFAAACISQLADDFAQVFLAILVNIMTSTTSL-AIKMAGARVFAKLGCSHSMAKTAYKA 252
           S +AAAC  +L+DDFA V L ILVN+++S+  + A+++AG RVFAK+GCS S+A  AYK 
Sbjct: 181 SFYAAACFCELSDDFASVILEILVNMLSSSQMMSAVRLAGVRVFAKMGCSSSLAHRAYKV 240

Query: 253 GLELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCS 312
           GL+L  +SSEE FLVAML SLSKLAS   F+ SEQ                   V  LCS
Sbjct: 241 GLKLLMDSSEEHFLVAMLISLSKLASIFSFLISEQ-------------------VDLLCS 300

Query: 313 FLSDKKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLL 372
           FL+ +K+  V+  ++RCL FIF++  C F     +V+IL   LD+P L +   C  LR+ 
Sbjct: 301 FLTQEKTLHVKAMAIRCLHFIFIRSMCHFPVSAYIVKILFSMLDDPELPSDLQCQALRIF 342

BLAST of CmoCh04G011000 vs. TrEMBL
Match: U7E187_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0025s00450g PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.2e-90
Identity = 195/363 (53.72%), Postives = 252/363 (69.42%), Query Frame = 1

Query: 13  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVT 72
           MER +AACAMEWSIELEKALRSKKPG+ +E I +IG R+Q+WS+EP+P +AVYNMF LVT
Sbjct: 1   MERISAACAMEWSIELEKALRSKKPGQTIEGIQRIGKRIQEWSKEPKPTMAVYNMFGLVT 60

Query: 73  WEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSRD--RTKSKQYQGVLSKARVQ 132
            EDRLF+NTILLRLADAF+  D+  RV++VKVFL EL SRD  + K +QY+G+LSK RVQ
Sbjct: 61  GEDRLFANTILLRLADAFRFGDRETRVSIVKVFLLELKSRDNKKMKGRQYRGILSKDRVQ 120

Query: 133 NHHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKAS 192
           NH ELL RVK+V   GD +++ALAL L GCWA FA+ SA IRY+ILSSM+SS + +V+AS
Sbjct: 121 NHVELLKRVKIVFDTGDVDSKALALALFGCWAPFAKDSAHIRYLILSSMISSDVLQVQAS 180

Query: 193 IFAAACISQLADDFAQVFLAILVNIMTST-TSLAIKMAGARVFAKLGCSHSMAKTAYKAG 252
           +FAA C  +LA DF  V L +LVN++TS+ T L I++ G RVFAK+G S+S+A  AYK G
Sbjct: 181 LFAAGCFCELAGDFVPVVLEMLVNMVTSSETLLTIRLVGTRVFAKMGPSYSVASRAYKTG 240

Query: 253 LELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSF 312
           L+L  +S EED +V ML SL+KLASKS  +  E                   QV  L  F
Sbjct: 241 LKLL-DSLEEDLVVTMLVSLTKLASKSTLLLLE-------------------QVDLLLPF 300

Query: 313 LSDKKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLR 372
           LS +K    Q T+LRCL FIFM+G    +     ++     +DE  L  +  C+ L++L 
Sbjct: 301 LSQEKDLLFQATALRCLHFIFMRGVVYSSVSAHGIKTFSRIVDEADLPLSMQCEALQILH 343

BLAST of CmoCh04G011000 vs. TAIR10
Match: AT4G20060.1 (AT4G20060.1 ARM repeat superfamily protein)

HSP 1 Score: 272.7 bits (696), Expect = 3.5e-73
Identity = 164/363 (45.18%), Postives = 227/363 (62.53%), Query Frame = 1

Query: 13  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVT 72
           ME+ +AACAMEWSI+LEK+LRSK   +AVEAIL+ G +L+QWS+EPE  IAVYN+F LV 
Sbjct: 1   MEKVSAACAMEWSIKLEKSLRSKNSVKAVEAILETGGKLEQWSKEPESAIAVYNLFGLVP 60

Query: 73  WEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELN-SRDRTKSKQYQGVLSKARVQN 132
            ED+LFSNTILLRL DAF   DK I++AVV+VF+S    SR +  ++     LSK RV N
Sbjct: 61  EEDKLFSNTILLRLVDAFCVGDKLIKLAVVRVFMSMFKLSRGKNVNESASWFLSKGRVHN 120

Query: 133 HHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASI 192
           H ELLTRVK V   GD E++ALALIL GCW  FA   A +RY++ SSM+S H  E ++++
Sbjct: 121 HLELLTRVKNVYDKGDTESKALALILFGCWRDFASEFAPVRYLVFSSMVSPHDLEGRSAL 180

Query: 193 FAAACISQLADDFAQVFLAILVNIMTSTTSLAIK--MAGARVFAKLGCSHSMAKTAYKAG 252
           FAAAC  ++ADDFA V L +L N M     +  K  +A  RVFAK+GCSH++A  A+K  
Sbjct: 181 FAAACFCEVADDFALVVLGML-NDMVKFPDITPKTRLAAVRVFAKMGCSHTIANRAFKIC 240

Query: 253 LELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSF 312
           ++L  +S +ED LV  L SL+KLAS+S  ++SE                     + +  F
Sbjct: 241 MKLMLDSPKEDNLVPFLVSLTKLASRSTHLASE-------------------LAEVIIPF 300

Query: 313 LSDKKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLR 372
           L + K++  +   LRCL F+  +G C     E  +  +   L +  L++      L++ +
Sbjct: 301 LGEDKTSHARAAVLRCLHFLIERGMCFSLAHERDIASVSSLLKQEELSSDMQVKALQIFQ 343

BLAST of CmoCh04G011000 vs. NCBI nr
Match: gi|659129538|ref|XP_008464722.1| (PREDICTED: uncharacterized protein LOC103502541 isoform X1 [Cucumis melo])

HSP 1 Score: 548.5 bits (1412), Expect = 9.3e-153
Identity = 292/360 (81.11%), Postives = 318/360 (88.33%), Query Frame = 1

Query: 13  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVT 72
           MERN+AACAMEWSIELEKALR KKPGRAVEAI QIG RLQQWSREPEPNIAVYNMFDLVT
Sbjct: 1   MERNSAACAMEWSIELEKALRFKKPGRAVEAIRQIGCRLQQWSREPEPNIAVYNMFDLVT 60

Query: 73  WEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSRDRTKSKQYQGVLSKARVQNH 132
           WED+LFSNTILLRLADAFK DDKHIR+AVV+VFLSEL SRD ++SKQYQG+LSKARVQN 
Sbjct: 61  WEDKLFSNTILLRLADAFKIDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNP 120

Query: 133 HELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIF 192
           HELLTRVKVVL GGDPEA+ALALI+LGCWAHFA+ SAQIRY+I  S+ SSH+SEVKASIF
Sbjct: 121 HELLTRVKVVLHGGDPEAKALALIVLGCWAHFAKDSAQIRYLIFYSLFSSHLSEVKASIF 180

Query: 193 AAACISQLADDFAQVFLAILVNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLEL 252
           AAACISQLADDFAQVFL ILVNIMTSTTSLAI+MAGARVFAKLGCSHSMAKTAYKAGLEL
Sbjct: 181 AAACISQLADDFAQVFLVILVNIMTSTTSLAIRMAGARVFAKLGCSHSMAKTAYKAGLEL 240

Query: 253 ASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSFLSD 312
           AS++SEE FL+AMLFSLSKLASKS+FISSEQ                   V+FLCSFLS 
Sbjct: 241 ASDTSEEGFLIAMLFSLSKLASKSIFISSEQ-------------------VQFLCSFLSH 300

Query: 313 KKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI 372
           KKS RV++TSLRCL FIFMKG C F NMESVV+IL+DALDE ML T+SHCD LRLL+K+I
Sbjct: 301 KKSVRVRDTSLRCLCFIFMKGACQFVNMESVVKILIDALDEHMLPTSSHCDALRLLQKII 341

BLAST of CmoCh04G011000 vs. NCBI nr
Match: gi|778698352|ref|XP_011654518.1| (PREDICTED: uncharacterized protein LOC101204851 isoform X1 [Cucumis sativus])

HSP 1 Score: 544.7 bits (1402), Expect = 1.3e-151
Identity = 290/360 (80.56%), Postives = 315/360 (87.50%), Query Frame = 1

Query: 13  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVT 72
           MER++AACAMEWSIELEKALR KKPGRAVEAI QIG RLQQWSREPEPN+AVYNMFDLVT
Sbjct: 1   MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT 60

Query: 73  WEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSRDRTKSKQYQGVLSKARVQNH 132
           WEDRLFSNTILLRLADAFK DDKHIR+AVV+VFLSEL SRD ++SKQYQG+LSKARVQNH
Sbjct: 61  WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNH 120

Query: 133 HELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIF 192
           HELLTRVKVVL GGDPEAR LALILLGCWAHFA+ SAQIRY+I SS+ SSH+SEVKASIF
Sbjct: 121 HELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIF 180

Query: 193 AAACISQLADDFAQVFLAILVNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGLEL 252
           AAACI QLADDFAQVFLAILVNIMTSTTSL I+MAGARVFAKLGCSHSMAKTAYKAGLEL
Sbjct: 181 AAACICQLADDFAQVFLAILVNIMTSTTSLTIRMAGARVFAKLGCSHSMAKTAYKAGLEL 240

Query: 253 ASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSFLSD 312
           AS++S+E FLVAMLFSLSKLASKS+FISSEQ                   V+FLCSFLS 
Sbjct: 241 ASDTSDESFLVAMLFSLSKLASKSIFISSEQ-------------------VQFLCSFLSH 300

Query: 313 KKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRKVI 372
           KKS  V+E SLRCL FIFMKG   F NMESVV+IL+DALDE ML T+SHCD LRLL+K++
Sbjct: 301 KKSVHVREKSLRCLCFIFMKGAFQFVNMESVVKILIDALDEHMLPTSSHCDALRLLQKIL 341

BLAST of CmoCh04G011000 vs. NCBI nr
Match: gi|700194541|gb|KGN49718.1| (hypothetical protein Csa_5G083800 [Cucumis sativus])

HSP 1 Score: 406.0 bits (1042), Expect = 7.5e-110
Identity = 210/238 (88.24%), Postives = 223/238 (93.70%), Query Frame = 1

Query: 13  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVT 72
           MER++AACAMEWSIELEKALR KKPGRAVEAI QIG RLQQWSREPEPN+AVYNMFDLVT
Sbjct: 1   MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT 60

Query: 73  WEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSRDRTKSKQYQGVLSKARVQNH 132
           WEDRLFSNTILLRLADAFK DDKHIR+AVV+VFLSEL SRD ++SKQYQG+LSKARVQNH
Sbjct: 61  WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNH 120

Query: 133 HELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIF 192
           HELLTRVKVVL GGDPEAR LALILLGCWAHFA+ SAQIRY+I SS+ SSH+SEVKASIF
Sbjct: 121 HELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIF 180

Query: 193 AAACISQLADDFAQVFLAILVNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYKAGL 251
           AAACI QLADDFAQVFLAILVNIMTSTTSL I+MAGARVFAKLGCSHSMAKTAYK  L
Sbjct: 181 AAACICQLADDFAQVFLAILVNIMTSTTSLTIRMAGARVFAKLGCSHSMAKTAYKVML 238

BLAST of CmoCh04G011000 vs. NCBI nr
Match: gi|778698355|ref|XP_011654519.1| (PREDICTED: uncharacterized protein LOC101204851 isoform X2 [Cucumis sativus])

HSP 1 Score: 406.0 bits (1042), Expect = 7.5e-110
Identity = 209/235 (88.94%), Postives = 222/235 (94.47%), Query Frame = 1

Query: 13  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVT 72
           MER++AACAMEWSIELEKALR KKPGRAVEAI QIG RLQQWSREPEPN+AVYNMFDLVT
Sbjct: 1   MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT 60

Query: 73  WEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSRDRTKSKQYQGVLSKARVQNH 132
           WEDRLFSNTILLRLADAFK DDKHIR+AVV+VFLSEL SRD ++SKQYQG+LSKARVQNH
Sbjct: 61  WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNH 120

Query: 133 HELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASIF 192
           HELLTRVKVVL GGDPEAR LALILLGCWAHFA+ SAQIRY+I SS+ SSH+SEVKASIF
Sbjct: 121 HELLTRVKVVLNGGDPEARGLALILLGCWAHFAKDSAQIRYLIFSSLFSSHLSEVKASIF 180

Query: 193 AAACISQLADDFAQVFLAILVNIMTSTTSLAIKMAGARVFAKLGCSHSMAKTAYK 248
           AAACI QLADDFAQVFLAILVNIMTSTTSL I+MAGARVFAKLGCSHSMAKTAYK
Sbjct: 181 AAACICQLADDFAQVFLAILVNIMTSTTSLTIRMAGARVFAKLGCSHSMAKTAYK 235

BLAST of CmoCh04G011000 vs. NCBI nr
Match: gi|802753789|ref|XP_012088572.1| (PREDICTED: uncharacterized protein LOC105647182 isoform X1 [Jatropha curcas])

HSP 1 Score: 362.5 bits (929), Expect = 9.5e-97
Identity = 201/362 (55.52%), Postives = 264/362 (72.93%), Query Frame = 1

Query: 13  MERNAAACAMEWSIELEKALRSKKPGRAVEAILQIGSRLQQWSREPEPNIAVYNMFDLVT 72
           +ER +AACAMEWSIELEKALRSKKPG+AV A+ QIGSRL QWSREP+P +AVYNMF LV 
Sbjct: 12  LERISAACAMEWSIELEKALRSKKPGQAVNALQQIGSRLHQWSREPKPTMAVYNMFGLVP 71

Query: 73  WEDRLFSNTILLRLADAFKSDDKHIRVAVVKVFLSELNSRDRT-KSKQYQGVLSKARVQN 132
            EDRLF+NTILLRLADAF+  DK  R++VV++FLSE  +RD+  K ++++G+LSK+RV N
Sbjct: 72  GEDRLFANTILLRLADAFRLGDKDTRLSVVRIFLSEFRNRDKEQKGERHEGILSKSRVHN 131

Query: 133 HHELLTRVKVVLGGGDPEARALALILLGCWAHFAEGSAQIRYMILSSMLSSHISEVKASI 192
           H ELL RVK+    GD E+RALALIL GCWA FA+ ++ IRY+ILSS++SS I EVKAS+
Sbjct: 132 HMELLKRVKIAFDTGDVESRALALILFGCWADFAKDNSHIRYLILSSLVSSEILEVKASL 191

Query: 193 FAAACISQLADDFAQVFLAILVNIMTST-TSLAIKMAGARVFAKLGCSHSMAKTAYKAGL 252
           F+A C  +LA DFA V L +L+NI+ S  TS A+K+AG RVF+K+GCSHS+A  A+K GL
Sbjct: 192 FSAGCFCELAADFAPVVLEMLLNILISPDTSTAVKLAGVRVFSKMGCSHSVANRAHKIGL 251

Query: 253 ELASNSSEEDFLVAMLFSLSKLASKSVFISSEQDFDLLNHRMLLLVYDVPTQVKFLCSFL 312
           +L  +S EE+FLVAML SLS+LA+KS  I S+Q                   V  L SFL
Sbjct: 252 KLLEDSLEEEFLVAMLVSLSRLAAKSTLILSDQ-------------------VNLLLSFL 311

Query: 313 SDKKSARVQETSLRCLRFIFMKGECLFTNMESVVRILVDALDEPMLTTTSHCDVLRLLRK 372
           S ++S +VQ T+LRCL+FIF K  C  T    V++ L+  ++E  L +    + L++L+K
Sbjct: 312 SPERSLQVQATALRCLKFIFKKVFCHSTVSTHVIKTLLRTIEETELPSAMQYEALQILQK 354

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KJG8_CUCSA5.2e-11088.24Uncharacterized protein OS=Cucumis sativus GN=Csa_5G083800 PE=4 SV=1[more]
A0A067GPN8_CITSI7.3e-9655.25Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001104mg PE=4 SV=1[more]
B9T1M5_RICCO4.4e-9353.87Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0122800 PE=4 SV=1[more]
D7SVD9_VITVI4.9e-9253.99Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0068g00700 PE=4 SV=... [more]
U7E187_POPTR1.2e-9053.72Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0025s00450g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G20060.13.5e-7345.18 ARM repeat superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659129538|ref|XP_008464722.1|9.3e-15381.11PREDICTED: uncharacterized protein LOC103502541 isoform X1 [Cucumis melo][more]
gi|778698352|ref|XP_011654518.1|1.3e-15180.56PREDICTED: uncharacterized protein LOC101204851 isoform X1 [Cucumis sativus][more]
gi|700194541|gb|KGN49718.1|7.5e-11088.24hypothetical protein Csa_5G083800 [Cucumis sativus][more]
gi|778698355|ref|XP_011654519.1|7.5e-11088.94PREDICTED: uncharacterized protein LOC101204851 isoform X2 [Cucumis sativus][more]
gi|802753789|ref|XP_012088572.1|9.5e-9755.52PREDICTED: uncharacterized protein LOC105647182 isoform X1 [Jatropha curcas][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Biological Process
TermDefinition
GO:0016180snRNA processing
Vocabulary: Cellular Component
TermDefinition
GO:0032039integrator complex
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016180 snRNA processing
cellular_component GO:0032039 integrator complex
molecular_function GO:0005488 binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G011000.1CmoCh04G011000.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3DG3DSA:1.25.10.10coord: 79..352
score: 2.
IPR016024Armadillo-type foldunknownSSF48371ARM repeatcoord: 76..354
score: 1.11
NoneNo IPR availablePANTHERPTHR13322C1ORF73 PROTEINcoord: 297..370
score: 1.7E-96coord: 6..277
score: 1.7

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G011000MELO3C026444Melon (DHL92) v3.5.1cmomeB637
CmoCh04G011000Bhi07G000343Wax gourdcmowgoB0888
The following gene(s) are paralogous to this gene:

None