CmoCh04G011000 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCGTGGTGTCGCCGCCGGCCGGGAGTGCCTCCGCGTTACAACAAGGTCACTAGTTTCTATCTTTTTTCGCCTCTTTGCTTTTCGCCGCTGCAAATTTTGGTCGGACTTGGTGGTTGATTGGCTCATTGAGAGCTTACTTAACCTTCGTGATTTTCTGCCTTATCATTGTAGTTCAACAATCATTGTTTGGTAAGGCTCGAAGTTTGAAGATTTGGGTACCGAATTTAGCGTTTTTTTTTTTATTCGCTGGGACTATTTGGTGATGCTTTCGTAAAGGGGTCTGGGGCGTTCGAGTGCATGTGTGACTGCTATTGGTTTGAGTATCTGCATCACATGGAGAGAAATGCTGCAGCTTGTGCTATGGAATGGAGTATTGAGCTGGAGAAGGCTCTTCGTTCAAAGAAACCAGGTTCGTCAATCGTCTGACTGATCTATGTTCTTTAATTTCAAACGAAAGTTACTAGGCTAGCTTCTAAAAAAGGGAGAGAGAAAAGAAACGATAGTTAGGAATCACGACTCTCCACAGTGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGACTTTGATTTGAGCTTCCCAAAAGACCTCGTACCAACAGTGATGTATTCCTTACTTGTAATCCCATTATAATTTCCTAAATTAACCAACGTGGGACTCCCCCAACAATCCTCAGCAATCCTCCCCTCGAACAAAGTACACTATAGAGCCTCTCCTGAGGCCTATGGAGCCCTCGAACAAAGTATACCCCTTGTTCGACACTTGAGTCACTTTTGACTATACCTTCGAGGCTCACAACTTCTTTGTTCGACATTTGAGGATTCTATTGACATGGCTAAGTTAAGGGTATGACTCTGATACCATGTTAGAAATCACGACTCTCCAAAATGGTATGATATTGTCTACTATGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCAAAAGGCCTCATACCAATGGAGATGTATTCCTTACCTATAAACCTAAACCCATGATCATTCCCTAAATTATCCAACGTGGGACTCCCTCCCAATCATCCTCAATATTACTGTCACAAAAGCTGCTTGTCAATTGATCCCTCATCGGCTGAGCATCTCCATTGAACTAAAAACAACATTGGTGCCTACTTTGGGGTTGGAGCACAGTAATAGCACTGTCTTAATGAAATATAATACTTGTAATTTGTGGTTTATTCAGGTCGGGCTGTTGAAGCTATACTTCAGATTGGATCTCGACTTCAGCAATGGAGTAGAGAGCCAGAGCCAAATATAGCAGTATATAATATGTTTGACCTTGTTACTTGGGAGGATAGGCTATTTTCCAACACTATTCTCCTACGGCTTGCCGATGCGTTTAAGTCTGATGACAAACATATTAGAGTTGCAGTTGTTAAGGTATTCTTATCCGAGCTCAATAGCCGTGACAGGACAAAAAGTAAACAATACCAAGGGGTTCTTTCAAAGGCCAGAGTGCAAAACCACCATGAATTACTGACTCGAGTAAAGGTTGTTCTTGGTGGAGGGGATCCTGAGGCTAGGGCTCTAGCTTTGATTCTATTAGGATGTTGGGCACATTTTGCAGAAGGCAGTGCCCAGATACGTTATATGATACTTTCTAGCATGCTATCTTCTCATATTTCGGAGGTTAGTGCTGTATACATTTTATTTTCTTCTCAAAATTTAATCTTTTATGACAATTTTAGTTTATGTTGTCCAACTGGGTTCAGTATATAAATTCCCTTATGACGAAAGAATGTTTAAGAAAAGCTTTCATTTCCTCAATAAGAGTTTCCTCAATAAGAGTTTCGTATTTGGCATTGTATCATTATGTAATGAACCTAACTCGAAATCGTTCTTATGGGTATGCACCATGTGAGGAAAAGTAATCCATACTCAATGTACTTATAACACACACGAGGTCCTGCATAAAAACCATGGGGCCGTTGGATGATGCATACAGCACTTCCATGTTATCATGATATACATTCTCTACGAGACTAGCATACATAATCATGACATTTCTAACATACTTTATAACATATTTCAACTCATGGTGCCTCGAGAATCACACATGTTCATAAGATTCACATGCATGGAAGTACGATACATCAAATAAAACATACATAGTTATATCATTATCATATATCACGTAATAAACAAGTATGATACAATAATTTTATCCAACCAGCCCATAGGCATCCCAATAGGGTCCACGTACAGTTTTAGGTTCACTTGATGCTCCTAAGCTTGCCTTGTTTGAATATTCTTAGGTTTAGCTTCACGTAATCCAATTTTACCTACAATATTCCTTCCACTCAGAAAATTGAGTTTTGAGCCTACTTGTGGAGCCAAATCCTTTCACTATCCTTAAATCAGTGTGAAATATTATTAGTGGTCCAAAACAGTAGTCGTACGGACATTTTTGGGCTTAATTTGGTCAAAAGCACTCCCGGAATGATCGAAAACGATTCAAACTAGCCAACCGAAACAAGAAAGCCGACCAAATATTCTTTTTCTCAACTATAACACGTATGCCCTGGACTTGGAAGCAAATTCATCTTCTTGATTGAGAATAAGTTTCATAAATAATTTATGTAAGGGTTTTGGGGTAGAGACTGGATTGTTTGTTTAGTGGACTCATTCCTCGATAAAACTAGCAGTAAGCTAAAATGTAGTTCATAGAGGCCAAAATAATTTTAATTATAGTATTTAGAAAATTGTTGTGGATGCTCTCAAGGAAAAATCAATTACCTTAACCTACTAAATCTTGTACCGTCTTTGACAATTTCGTTTAAGGTTTAGCATTGATTTATTTTGTGTTGTGTTCTATTAGTGGATTATTAGGAAATTTAACGAAGTGTATGTAAAGCCAAACCCAATTTTATGTATTCTGGACATTCCTGTTTAAGAGGAGATTCCTTCTCCATCCTATACACTATAATTGCATGATTCCTTAATAAACCTGTCTACACAAAATTTTGAACATATTTTAAACTAAGGATATCCTCTTTTACAGGTTAAAGCATCTATATTTGCTGCAGCATGCATTAGTCAGTTAGCAGATGACTTTGCGCAAGTCTTCTTAGCGATTTTGGTTAATATAATGACTTCTACTACATCCTTGGCCATCAAAATGGCTGGAGCTCGAGTGTTCGCGAAATTGGGATGCTCACATTCAATGGCCAAAACGGCTTACAAGGTTATGCTCATCTTTTGATTTATTTTGAATTCAAATAGAGTTCTGAGTCTTTGAGATGATAATATTGATCATGAAGTCTTAACTTGGCCTTGAAAAAGGTGGCATGTCTTATTGTTTTGTAATACTATCTCATATTGAAGTCGAGGGAGTGAAAAGTTGGCTTTGGTCAATGATGTAAGCTCAGCAAATTGCTCCACTTCTCCTTAATAGTTATTATGAAGAACCAAAGTGGTACATCCAGTTCTACAGCCTTCTTGTATTAAACATATGGATACTAACTTTGACACTGAAACGTACTTCAGATTGTATCTCGACTTTGGCAATGGAGAAAGTATTAATGATTAATCCAATATTACATGGACTGGAACAGTATGCTGTATTGTTATTGAATTTCGGAGTTACTTTTCTATTGTTGATGCTCGTTTATCTTTGAACTTCATCAGCCAGATAATTTTAAATCGCTTCCCTGACCGCCTATCTTATGAGTCCATTCTTGTCTTGTTGGTTTGTTGTATTATTTTGTACCTCTCTCGGGGTTCAAAGATTGCTTTGTCGAATGGGCTGGCCTTTTAGAGAGCAGTAGAATGTTGGGTTAGCTCTGCCTTGATGTGATAGGGGGGTGAGAGGAATTGATGAAGAAATGTCGGAGTATGCATGCGACCAATTTTTTCAAGAATCTGCATGCATAAAAAAATATTACTGTGCTGATTATGACTTGACATGGTTTTTAACTATCTAATTATTGTAGGCTGGACTCGAGCTCGCCTCAAACTCTAGTGAAGAGGATTTTTTGGTTGCAATGTTATTTTCTCTATCCAAACTGGCTTCGAAGTCAGTATTTATTAGTTCTGAGCAGGTAACTATTCTTCTTAGATGATGGTTGCTTTTGGACGCATTGTAGGATTTTGATCTTCTTAATCATAGTAGGAATGTTATTACTTGTTTACGATGTCCCAACGCAGGTGAAATTTCTTTGCTCGTTTCTTAGCGACAAAAAGTCTGCGCGTGTGCAAGAAACATCTTTAAGATGTTTGCGTTTTATTTTCATGAAAGGAGAATGCCTGTTTACTAATATGGAATCTGTGGTCAGAATTTTAGTTGATGCACTGGATGAACCCATGCTAACGACTACGTCACATTGTGACGTTCTACGGCTGTTGCGAAAGGTCATTCCTGAGCTTAAATGGATGAACTCATGTTTAAGTTTTGATCTTGAAATATGTTGA CCGTGGTGTCGCCGCCGGCCGGGAGTGCCTCCGCGTTACAACAAGTTCAACAATCATTGTTTGGTAAGGCTCGAAGTTTGAAGATTTGGGTACCGAATTTAGCGTTTTTTTTTTTATTCGCTGGGACTATTTGGTGATGCTTTCGTAAAGGGGTCTGGGGCGTTCGAGTGCATGTGTGACTGCTATTGGTTTGAGTATCTGCATCACATGGAGAGAAATGCTGCAGCTTGTGCTATGGAATGGAGTATTGAGCTGGAGAAGGCTCTTCGTTCAAAGAAACCAGGTCGGGCTGTTGAAGCTATACTTCAGATTGGATCTCGACTTCAGCAATGGAGTAGAGAGCCAGAGCCAAATATAGCAGTATATAATATGTTTGACCTTGTTACTTGGGAGGATAGGCTATTTTCCAACACTATTCTCCTACGGCTTGCCGATGCGTTTAAGTCTGATGACAAACATATTAGAGTTGCAGTTGTTAAGGTATTCTTATCCGAGCTCAATAGCCGTGACAGGACAAAAAGTAAACAATACCAAGGGGTTCTTTCAAAGGCCAGAGTGCAAAACCACCATGAATTACTGACTCGAGTAAAGGTTGTTCTTGGTGGAGGGGATCCTGAGGCTAGGGCTCTAGCTTTGATTCTATTAGGATGTTGGGCACATTTTGCAGAAGGCAGTGCCCAGATACGTTATATGATACTTTCTAGCATGCTATCTTCTCATATTTCGGAGGTTAAAGCATCTATATTTGCTGCAGCATGCATTAGTCAGTTAGCAGATGACTTTGCGCAAGTCTTCTTAGCGATTTTGGTTAATATAATGACTTCTACTACATCCTTGGCCATCAAAATGGCTGGAGCTCGAGTGTTCGCGAAATTGGGATGCTCACATTCAATGGCCAAAACGGCTTACAAGGCTGGACTCGAGCTCGCCTCAAACTCTAGTGAAGAGGATTTTTTGGTTGCAATGTTATTTTCTCTATCCAAACTGGCTTCGAAGTCAGTATTTATTAGTTCTGAGCAGGATTTTGATCTTCTTAATCATAGAATGTTATTACTTGTTTACGATGTCCCAACGCAGGTGAAATTTCTTTGCTCGTTTCTTAGCGACAAAAAGTCTGCGCGTGTGCAAGAAACATCTTTAAGATGTTTGCGTTTTATTTTCATGAAAGGAGAATGCCTGTTTACTAATATGGAATCTGTGGTCAGAATTTTAGTTGATGCACTGGATGAACCCATGCTAACGACTACGTCACATTGTGACGTTCTACGGCTGTTGCGAAAGGTCATTCCTGAGCTTAAATGGATGAACTCATGTTTAAGTTTTGATCTTGAAATATGTTGA ATGTGTGACTGCTATTGGTTTGAGTATCTGCATCACATGGAGAGAAATGCTGCAGCTTGTGCTATGGAATGGAGTATTGAGCTGGAGAAGGCTCTTCGTTCAAAGAAACCAGGTCGGGCTGTTGAAGCTATACTTCAGATTGGATCTCGACTTCAGCAATGGAGTAGAGAGCCAGAGCCAAATATAGCAGTATATAATATGTTTGACCTTGTTACTTGGGAGGATAGGCTATTTTCCAACACTATTCTCCTACGGCTTGCCGATGCGTTTAAGTCTGATGACAAACATATTAGAGTTGCAGTTGTTAAGGTATTCTTATCCGAGCTCAATAGCCGTGACAGGACAAAAAGTAAACAATACCAAGGGGTTCTTTCAAAGGCCAGAGTGCAAAACCACCATGAATTACTGACTCGAGTAAAGGTTGTTCTTGGTGGAGGGGATCCTGAGGCTAGGGCTCTAGCTTTGATTCTATTAGGATGTTGGGCACATTTTGCAGAAGGCAGTGCCCAGATACGTTATATGATACTTTCTAGCATGCTATCTTCTCATATTTCGGAGGTTAAAGCATCTATATTTGCTGCAGCATGCATTAGTCAGTTAGCAGATGACTTTGCGCAAGTCTTCTTAGCGATTTTGGTTAATATAATGACTTCTACTACATCCTTGGCCATCAAAATGGCTGGAGCTCGAGTGTTCGCGAAATTGGGATGCTCACATTCAATGGCCAAAACGGCTTACAAGGCTGGACTCGAGCTCGCCTCAAACTCTAGTGAAGAGGATTTTTTGGTTGCAATGTTATTTTCTCTATCCAAACTGGCTTCGAAGTCAGTATTTATTAGTTCTGAGCAGGATTTTGATCTTCTTAATCATAGAATGTTATTACTTGTTTACGATGTCCCAACGCAGGTGAAATTTCTTTGCTCGTTTCTTAGCGACAAAAAGTCTGCGCGTGTGCAAGAAACATCTTTAAGATGTTTGCGTTTTATTTTCATGAAAGGAGAATGCCTGTTTACTAATATGGAATCTGTGGTCAGAATTTTAGTTGATGCACTGGATGAACCCATGCTAACGACTACGTCACATTGTGACGTTCTACGGCTGTTGCGAAAGGTCATTCCTGAGCTTAAATGGATGAACTCATGTTTAAGTTTTGATCTTGAAATATGTTGA
BLAST of CmoCh04G011000 vs. TrEMBL
Match: A0A0A0KJG8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G083800 PE=4 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 5.2e-110 Identity = 210/238 (88.24%), Postives = 223/238 (93.70%), Query Frame = 1
BLAST of CmoCh04G011000 vs. TrEMBL
Match: A0A067GPN8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001104mg PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 7.3e-96 Identity = 200/362 (55.25%), Postives = 259/362 (71.55%), Query Frame = 1
BLAST of CmoCh04G011000 vs. TrEMBL
Match: B9T1M5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0122800 PE=4 SV=1) HSP 1 Score: 349.7 bits (896), Expect = 4.4e-93 Identity = 195/362 (53.87%), Postives = 259/362 (71.55%), Query Frame = 1
BLAST of CmoCh04G011000 vs. TrEMBL
Match: D7SVD9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0068g00700 PE=4 SV=1) HSP 1 Score: 346.3 bits (887), Expect = 4.9e-92 Identity = 196/363 (53.99%), Postives = 253/363 (69.70%), Query Frame = 1
BLAST of CmoCh04G011000 vs. TrEMBL
Match: U7E187_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0025s00450g PE=4 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 1.2e-90 Identity = 195/363 (53.72%), Postives = 252/363 (69.42%), Query Frame = 1
BLAST of CmoCh04G011000 vs. TAIR10
Match: AT4G20060.1 (AT4G20060.1 ARM repeat superfamily protein) HSP 1 Score: 272.7 bits (696), Expect = 3.5e-73 Identity = 164/363 (45.18%), Postives = 227/363 (62.53%), Query Frame = 1
BLAST of CmoCh04G011000 vs. NCBI nr
Match: gi|659129538|ref|XP_008464722.1| (PREDICTED: uncharacterized protein LOC103502541 isoform X1 [Cucumis melo]) HSP 1 Score: 548.5 bits (1412), Expect = 9.3e-153 Identity = 292/360 (81.11%), Postives = 318/360 (88.33%), Query Frame = 1
BLAST of CmoCh04G011000 vs. NCBI nr
Match: gi|778698352|ref|XP_011654518.1| (PREDICTED: uncharacterized protein LOC101204851 isoform X1 [Cucumis sativus]) HSP 1 Score: 544.7 bits (1402), Expect = 1.3e-151 Identity = 290/360 (80.56%), Postives = 315/360 (87.50%), Query Frame = 1
BLAST of CmoCh04G011000 vs. NCBI nr
Match: gi|700194541|gb|KGN49718.1| (hypothetical protein Csa_5G083800 [Cucumis sativus]) HSP 1 Score: 406.0 bits (1042), Expect = 7.5e-110 Identity = 210/238 (88.24%), Postives = 223/238 (93.70%), Query Frame = 1
BLAST of CmoCh04G011000 vs. NCBI nr
Match: gi|778698355|ref|XP_011654519.1| (PREDICTED: uncharacterized protein LOC101204851 isoform X2 [Cucumis sativus]) HSP 1 Score: 406.0 bits (1042), Expect = 7.5e-110 Identity = 209/235 (88.94%), Postives = 222/235 (94.47%), Query Frame = 1
BLAST of CmoCh04G011000 vs. NCBI nr
Match: gi|802753789|ref|XP_012088572.1| (PREDICTED: uncharacterized protein LOC105647182 isoform X1 [Jatropha curcas]) HSP 1 Score: 362.5 bits (929), Expect = 9.5e-97 Identity = 201/362 (55.52%), Postives = 264/362 (72.93%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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