CmoCh04G010580 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCCAACAAATTTGGTACACAGGAACTGGAATAATATGCTGTTCCGATCGGACTGAGCTATGGGAGCTTCACATCAATGGAGTTCATCTCTTCAAACTGCTCCAATCAAGCTAAAATCTTCCATTTCCCTAACCTCCTCATCGAATTTCATCTTCTATTTCTGCAAACGATCTCGCGTGAATGATTCTTTAACTCGTCGTTGCGCTGTTTGTGCTCATAACTCCAATTTGCCGCGGTCGAAATCTACAAATTCTGATGCTCGGATTTCGAAATCCGTCGTTCTCGGAGATTGCCAAGGGCATGAGCTTGTTCGGATCTCTTCTACTTCGATTCGACGGCGTAACAGTGTGATTCTCTCTCTGGCGTCCTTATTTGATAAACGTTCTCTTTGGCGAAGAATCTTTTTTGCCTCGAAGAAAGTTAGGAGTATCATTTTGCTCAACATCGTCACGATTGTTTATGGTGAGCTTCTCCTTAACACCGCCCCTTTTCTATTAGATCAATTGTTGATATTCTGGATTAATCGTAAGAATGTGGAGTAGATATGTAAGATTTACGTATGCTGAAGCGGAATTCGTACTCAATCACATGTGGTTCAGCAGAAACTTTGCCATAATATACAAATTTTTTCTACTATTAAAAGTGCTAGCTACAAAAGTCTTGAAGTTTTTTTCCTTTTCATATAATAGGAATTTCATTAAGATCTTCAACTAAAATACTGTTCCATATCTTCAAATCATTGCTGCTGTAGCTAGCAGTATTCCAGTTGTGAAAGAGGTTGAAGAATTAGTGGATCCAGCAACCTTCAATGCTGTGCGGTTTGCCATAACTGCTATTCCATTCGTTCCACTTGTATTGTATAAATGGGATGATGTTGAGACTCGTAATGCTGGAATAGAGTTAGGTTTCTGGGTTAGTCTGGGGTACCTGATGCAGGCATTTGGACTGCTTACATCTGATGCCGGGCGAGCATCCTTTATATCAATGCTCACGGTAATATTCTGAATTATATGTTGTGTTAATGTTCTTGCTATAATATTGTGTGTTAATGTTCTTGTGTATCAATAATCAGGTACTTGTAGTTCCAATACTTGATGGAGTTTTAGGTGCTGTAGTTCCTGCTCGTACCTGGTTTGGAGTTCTCATGTCAGTCATTGGGGTTGCAATGCTTGAATCTAGTGGATCCCCTCCATGTGTATGTTTATTCTCAAAATTATTGTGATTATTGGCAGAATGTAATCTAATCAGCAGTTTTTTAAATTTCTGAATGCTTTCAATTTGAGATTTTGATGTATGTATAAACACCACATTCAACTAGTTCTTATGATTTATTTCAGGTGGGAGATCTTTTGAACTTCTTGAGTGCAATATTTTTTGGTGTGCATATGCTTAGAACAGAGCATATTTCAAGGCGTACAAAAAAGGATAAATTAGTACCACTCCTTGCATATGAAGTTAATATTTTCTCATATTGGGGGGGTGGCGATGGTGTTAGTTTTGCTGTATAGTTTGAATGATTTTAATTACTTTTTCAGGTTTGGGTTGTTTCTATTCTATCGATGCTGTGGTACTTTATTTGGAGATGGATTGATGGAACGGAAACAATTAGTGAGTCGTGGAATTGGAAAACGTATTCAGATTGGGTGTTCATGTTTCCTTGGGTACCTGCTCTGTACACAGGCTTATTGTCTACTGGTTTTTGCCTGTGGCTAGAGGTATGCCTTCTTATTTCGTCTATATATAAAATTTTAATTTCAGCCTTGCTTTTCCTTTGAGATGCTATTCGATTTTATTTGATCACGTGGGATCTCACATCGATTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTTCCTAGTAAACCCGTTTTAAAACCTTAAGGGGAAGCCTGAAAAGAAAAGCCCAAATATTTGCTAGCGATTAGGGCTTGGGCAGTTACAACTGGTATCAGAGCCAGGCACTGAGCCGTATGCTAGCGAAGATGTTGACCCTCAAGGGGTAGATTGTGAGATCTTACATCGATTGGAGAGGGAAACAAAGCATTCCTTATGAGGGTGTAGAAATGGAGCATTCCTTAACGGAAAGCCTAAAAAGAACAATATCTACTAGCGATGGGCTTGGACGGTTATAGATCCCGTCTAAATTATACAAATATTGGACTTTTATGTATGTGTATATGTATGCATGTATGTGATACATCTGTGCACATGGGTATGCACTTGAAGTGCAGCAAACAATATTTTCTTAGCAAATCAATATACAATTCTTCAGATGGGTGCCATGTGCGATGTATCAGCCACAGAGACTGCGGTTATTTACAGTTTGGAGCCAGTCTGGGGTGGAAGTTTTGCCTGGTTCCTTCTTGGTGAAAGGTGGGGATTGAGTGGCTGATTGGTGCTGCTCTGGTGCTAGGTAAACTTCCTTACAAAATTTAAAAATTTGTGATAGGAGCTATGCTATCTTATCTTTCAAGTAAAATTTTCAACATAAGTAAACTTTTCGGCTTTTCTTGTGGTTTATTATGAGTGGTAAACATTATTCCTTAGTGATGTCAATAATATTTTTATTTGAAAGGTAAAAAATTATTAGATTATGAACAATATTGTTACCCCTATGCTGAGGATCAACAAGGTGTATCAGATTATGAACAAAATGAATAGCTGATTGCATCAAAAACATCATATCTACAATTCTTCTGGACAAATATTTCTGTATTTCTTTGCATCTTATTCTGTAAGATATGGTGTTCATACTCCCCTCTACTTTGTACGACTTTTTTCAGTGTCCTGGTGATTTTGATATGTAGGTGGAAGCTTAACAGTGCAGATACTATCATCATCTGCAACCAAATCTTGCAAAGATGACAGAAGCAAGGAAGTCCATGACGTTTTGGGTTCTGCTGATAAACGCAGTTTGTCGACCTCTCCAATAGTTCTAACCAGGGGTAAAAATGTTACACATCACTTGAAAAAGTAAGGTATATTATTTAGGACCAAACTTCTAATATATACCATGCGATCTATTAGACATAATTTCGAAGGTTCAAGGACCAAACTTCTAATATAACATGTAATTTATGTACGTACGAATACATAATCATTAGAGCTTACCTATTAACATGTG ATCCAACAAATTTGGTACACAGGAACTGGAATAATATGCTGTTCCGATCGGACTGAGCTATGGGAGCTTCACATCAATGGAGTTCATCTCTTCAAACTGCTCCAATCAAGCTAAAATCTTCCATTTCCCTAACCTCCTCATCGAATTTCATCTTCTATTTCTGCAAACGATCTCGCGTGAATGATTCTTTAACTCGTCGTTGCGCTGTTTGTGCTCATAACTCCAATTTGCCGCGGTCGAAATCTACAAATTCTGATGCTCGGATTTCGAAATCCGTCGTTCTCGGAGATTGCCAAGGGCATGAGCTTGTTCGGATCTCTTCTACTTCGATTCGACGGCGTAACAGTGTGATTCTCTCTCTGGCGTCCTTATTTGATAAACGTTCTCTTTGGCGAAGAATCTTTTTTGCCTCGAAGAAAGTTAGGAGTATCATTTTGCTCAACATCGTCACGATTGTTTATGCTAGCAGTATTCCAGTTGTGAAAGAGGTTGAAGAATTAGTGGATCCAGCAACCTTCAATGCTGTGCGGTTTGCCATAACTGCTATTCCATTCGTTCCACTTGTATTGTATAAATGGGATGATGTTGAGACTCGTAATGCTGGAATAGAGTTAGGTTTCTGGGTTAGTCTGGGGTACCTGATGCAGGCATTTGGACTGCTTACATCTGATGCCGGGCGAGCATCCTTTATATCAATGCTCACGGTACTTGTAGTTCCAATACTTGATGGAGTTTTAGGTGCTGTAGTTCCTGCTCGTACCTGGTTTGGAGTTCTCATGTCAGTCATTGGGGTTGCAATGCTTGAATCTAGTGGATCCCCTCCATGTGTGGGAGATCTTTTGAACTTCTTGAGTGCAATATTTTTTGGTGTGCATATGCTTAGAACAGAGCATATTTCAAGGCGTACAAAAAAGGATAAATTAGTACCACTCCTTGCATATGAAGTTTGGGTTGTTTCTATTCTATCGATGCTGTGGTACTTTATTTGGAGATGGATTGATGGAACGGAAACAATTAGTGAGTCGTGGAATTGGAAAACGTATTCAGATTGGGTGTTCATGTTTCCTTGGGTACCTGCTCTGTACACAGGCTTATTGTCTACTGGTTTTTGCCTGTGGCTAGAGCAAATCAATATACAATTCTTCAGATGGGTGCCATGTGCGATGTATCAGCCACAGAGACTGCGGTTATTTACAGTTTGGAGCCAGTCTGGGGTGGAAGTTTTGCCTGGTTCCTTCTTGGTGGGGATTGAGTGGCTGATTGGTGCTGCTCTGGTGCTAGGTGGAAGCTTAACAGTGCAGATACTATCATCATCTGCAACCAAATCTTGCAAAGATGACAGAAGCAAGGAAGTCCATGACGTTTTGGGTTCTGCTGATAAACGCAGTTTGTCGACCTCTCCAATAGTTCTAACCAGGGGTAAAAATGTTACACATCACTTGAAAAAGTAAGGTATATTATTTAGGACCAAACTTCTAATATATACCATGCGATCTATTAGACATAATTTCGAAGGTTCAAGGACCAAACTTCTAATATAACATGTAATTTATGTACGTACGAATACATAATCATTAGAGCTTACCTATTAACATGTG ATGGGAGCTTCACATCAATGGAGTTCATCTCTTCAAACTGCTCCAATCAAGCTAAAATCTTCCATTTCCCTAACCTCCTCATCGAATTTCATCTTCTATTTCTGCAAACGATCTCGCGTGAATGATTCTTTAACTCGTCGTTGCGCTGTTTGTGCTCATAACTCCAATTTGCCGCGGTCGAAATCTACAAATTCTGATGCTCGGATTTCGAAATCCGTCGTTCTCGGAGATTGCCAAGGGCATGAGCTTGTTCGGATCTCTTCTACTTCGATTCGACGGCGTAACAGTGTGATTCTCTCTCTGGCGTCCTTATTTGATAAACGTTCTCTTTGGCGAAGAATCTTTTTTGCCTCGAAGAAAGTTAGGAGTATCATTTTGCTCAACATCGTCACGATTGTTTATGCTAGCAGTATTCCAGTTGTGAAAGAGGTTGAAGAATTAGTGGATCCAGCAACCTTCAATGCTGTGCGGTTTGCCATAACTGCTATTCCATTCGTTCCACTTGTATTGTATAAATGGGATGATGTTGAGACTCGTAATGCTGGAATAGAGTTAGGTTTCTGGGTTAGTCTGGGGTACCTGATGCAGGCATTTGGACTGCTTACATCTGATGCCGGGCGAGCATCCTTTATATCAATGCTCACGGTACTTGTAGTTCCAATACTTGATGGAGTTTTAGGTGCTGTAGTTCCTGCTCGTACCTGGTTTGGAGTTCTCATGTCAGTCATTGGGGTTGCAATGCTTGAATCTAGTGGATCCCCTCCATGTGTGGGAGATCTTTTGAACTTCTTGAGTGCAATATTTTTTGGTGTGCATATGCTTAGAACAGAGCATATTTCAAGGCGTACAAAAAAGGATAAATTAGTACCACTCCTTGCATATGAAGTTTGGGTTGTTTCTATTCTATCGATGCTGTGGTACTTTATTTGGAGATGGATTGATGGAACGGAAACAATTAGTGAGTCGTGGAATTGGAAAACGTATTCAGATTGGGTGTTCATGTTTCCTTGGGTACCTGCTCTGTACACAGGCTTATTGTCTACTGGTTTTTGCCTGTGGCTAGAGCAAATCAATATACAATTCTTCAGATGGGTGCCATGTGCGATGTATCAGCCACAGAGACTGCGGTTATTTACAGTTTGGAGCCAGTCTGGGGTGGAAGTTTTGCCTGGTTCCTTCTTGGTGGGGATTGAGTGGCTGATTGGTGCTGCTCTGGTGCTAGGTGGAAGCTTAACAGTGCAGATACTATCATCATCTGCAACCAAATCTTGCAAAGATGACAGAAGCAAGGAAGTCCATGACGTTTTGGGTTCTGCTGATAAACGCAGTTTGTCGACCTCTCCAATAGTTCTAACCAGGGGTAAAAATGTTACACATCACTTGAAAAAGTAA
BLAST of CmoCh04G010580 vs. Swiss-Prot
Match: Y788_ARCFU (Uncharacterized transporter AF_0788 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_0788 PE=3 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 8.6e-12 Identity = 57/183 (31.15%), Postives = 92/183 (50.27%), Query Frame = 1
BLAST of CmoCh04G010580 vs. TrEMBL
Match: A0A0A0KIV2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G045020 PE=4 SV=1) HSP 1 Score: 587.4 bits (1513), Expect = 1.5e-164 Identity = 302/355 (85.07%), Postives = 319/355 (89.86%), Query Frame = 1
BLAST of CmoCh04G010580 vs. TrEMBL
Match: A0A067FBB7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011986mg PE=4 SV=1) HSP 1 Score: 399.4 bits (1025), Expect = 5.8e-108 Identity = 226/419 (53.94%), Postives = 278/419 (66.35%), Query Frame = 1
BLAST of CmoCh04G010580 vs. TrEMBL
Match: M5XFU5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005484mg PE=4 SV=1) HSP 1 Score: 399.1 bits (1024), Expect = 7.6e-108 Identity = 245/475 (51.58%), Postives = 311/475 (65.47%), Query Frame = 1
BLAST of CmoCh04G010580 vs. TrEMBL
Match: V4UBE5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015117mg PE=4 SV=1) HSP 1 Score: 397.9 bits (1021), Expect = 1.7e-107 Identity = 236/461 (51.19%), Postives = 291/461 (63.12%), Query Frame = 1
BLAST of CmoCh04G010580 vs. TrEMBL
Match: A0A124SG72_CYNCS (Drug/metabolite transporter OS=Cynara cardunculus var. scolymus GN=Ccrd_016239 PE=4 SV=1) HSP 1 Score: 394.4 bits (1012), Expect = 1.9e-106 Identity = 227/475 (47.79%), Postives = 306/475 (64.42%), Query Frame = 1
BLAST of CmoCh04G010580 vs. NCBI nr
Match: gi|778698196|ref|XP_011654481.1| (PREDICTED: uncharacterized protein LOC101219169 isoform X1 [Cucumis sativus]) HSP 1 Score: 659.1 bits (1699), Expect = 5.8e-186 Identity = 353/467 (75.59%), Postives = 389/467 (83.30%), Query Frame = 1
BLAST of CmoCh04G010580 vs. NCBI nr
Match: gi|659098640|ref|XP_008450239.1| (PREDICTED: uncharacterized protein LOC103491903 isoform X1 [Cucumis melo]) HSP 1 Score: 645.6 bits (1664), Expect = 6.7e-182 Identity = 352/468 (75.21%), Postives = 385/468 (82.26%), Query Frame = 1
BLAST of CmoCh04G010580 vs. NCBI nr
Match: gi|778698200|ref|XP_011654482.1| (PREDICTED: uncharacterized protein LOC101219169 isoform X2 [Cucumis sativus]) HSP 1 Score: 645.2 bits (1663), Expect = 8.7e-182 Identity = 330/395 (83.54%), Postives = 351/395 (88.86%), Query Frame = 1
BLAST of CmoCh04G010580 vs. NCBI nr
Match: gi|659098646|ref|XP_008450241.1| (PREDICTED: uncharacterized protein LOC103491903 isoform X3 [Cucumis melo]) HSP 1 Score: 617.8 bits (1592), Expect = 1.5e-173 Identity = 322/396 (81.31%), Postives = 344/396 (86.87%), Query Frame = 1
BLAST of CmoCh04G010580 vs. NCBI nr
Match: gi|700194473|gb|KGN49650.1| (hypothetical protein Csa_5G045020 [Cucumis sativus]) HSP 1 Score: 587.4 bits (1513), Expect = 2.2e-164 Identity = 302/355 (85.07%), Postives = 319/355 (89.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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