CmoCh04G009960 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G009960
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Transmembrane protein, putative
Location	Cmo_Chr04 : 5012972 .. 5013916 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCGTCTGAAGAAGAACAAGATCAAGATCAAACCACCACATCTCTGCTCGTCTCTGCTCTGCCCTGCTCTTAAAATCCCCCCTTTTTTTTTTCATTTCTCTTTTTAATTTCCCTCTTTAATCCGCCATGGCCTCCGCCTTCTTCTTCCATAATTTCACCTTCTTCTTCTACATTTCCCTCCTCTCTCTCCCTCTCCGTCTTCCCCATTCCCTGTCTCTCTCCTCCACCATCCACGACCTCCTCCGCTCCCAAGGGCTGCCGGCCGGCCTTCTTCCGAAGGAGGTCAAGTCGTACACCCTGTCTCAAAATGGGTTGTTGGAAGTGTTCCTGGATGGGCCTTGTTTAACCAAATATGAGAACAGGGTTCTATTTGAGAGTGTTGTTAGGGCTAATCTCAGCTATGGCAGTCTGATTGGCGTACAGGGTCTCACTCAAGAGGAGCTCTTTTTATGGCTCCCCGTTAAGGATATCATCGTGGATGACCCTAAATCTGGGCTTATTCTCTTTGATATTGGTGTCGCTCACAAACAACTTGCTCTCTCTCTCTTCGAAGATCCCCCCAGTTGCAAGGCCCAACCCAAAGGTAAATCATCCTCTTCGATGAGTTTATTGTTGATTATTGTGTTCAATGTTAGATCCATCTTGGGTTTTGATGATTTAAGATTCCATATTCATATTCATATTGATGTTTGTGTATGATTGATTGGGATTCGCAGAGGCGTTGAGGAATCAGGTGAGGAAGGAGAAAGGATTTGAAGCTCTAAGATAGAGAGAGACAGAGAGAGAGAGAGAGAGAGAGGAGAGGAAAATGTCAAAATCGTGCTGGAAAATTTTGTCTTCTTTTATCTTTTTCTTTTTTTATTTTTATTTTTGGTTCTACCCCCAATGCCTATATAACTAAATTAGTTCTAATAATAGCTAATACTGTTATACGAGTTAGTAGAG

mRNA sequence

TCCGTCTGAAGAAGAACAAGATCAAGATCAAACCACCACATCTCTGCTCGTCTCTGCTCTGCCCTGCTCTTAAAATCCCCCCTTTTTTTTTTCATTTCTCTTTTTAATTTCCCTCTTTAATCCGCCATGGCCTCCGCCTTCTTCTTCCATAATTTCACCTTCTTCTTCTACATTTCCCTCCTCTCTCTCCCTCTCCGTCTTCCCCATTCCCTGTCTCTCTCCTCCACCATCCACGACCTCCTCCGCTCCCAAGGGCTGCCGGCCGGCCTTCTTCCGAAGGAGGTCAAGTCGTACACCCTGTCTCAAAATGGGTTGTTGGAAGTGTTCCTGGATGGGCCTTGTTTAACCAAATATGAGAACAGGGTTCTATTTGAGAGTGTTGTTAGGGCTAATCTCAGCTATGGCAGTCTGATTGGCGTACAGGGTCTCACTCAAGAGGAGCTCTTTTTATGGCTCCCCGTTAAGGATATCATCGTGGATGACCCTAAATCTGGGCTTATTCTCTTTGATATTGGTGTCGCTCACAAACAACTTGCTCTCTCTCTCTTCGAAGATCCCCCCAGTTGCAAGGCCCAACCCAAAGAGGCGTTGAGGAATCAGGTGAGGAAGGAGAAAGGATTTGAAGCTCTAAGATAGAGAGAGACAGAGAGAGAGAGAGAGAGAGAGGAGAGGAAAATGTCAAAATCGTGCTGGAAAATTTTGTCTTCTTTTATCTTTTTCTTTTTTTATTTTTATTTTTGGTTCTACCCCCAATGCCTATATAACTAAATTAGTTCTAATAATAGCTAATACTGTTATACGAGTTAGTAGAG

Coding sequence (CDS)

ATGGCCTCCGCCTTCTTCTTCCATAATTTCACCTTCTTCTTCTACATTTCCCTCCTCTCTCTCCCTCTCCGTCTTCCCCATTCCCTGTCTCTCTCCTCCACCATCCACGACCTCCTCCGCTCCCAAGGGCTGCCGGCCGGCCTTCTTCCGAAGGAGGTCAAGTCGTACACCCTGTCTCAAAATGGGTTGTTGGAAGTGTTCCTGGATGGGCCTTGTTTAACCAAATATGAGAACAGGGTTCTATTTGAGAGTGTTGTTAGGGCTAATCTCAGCTATGGCAGTCTGATTGGCGTACAGGGTCTCACTCAAGAGGAGCTCTTTTTATGGCTCCCCGTTAAGGATATCATCGTGGATGACCCTAAATCTGGGCTTATTCTCTTTGATATTGGTGTCGCTCACAAACAACTTGCTCTCTCTCTCTTCGAAGATCCCCCCAGTTGCAAGGCCCAACCCAAAGAGGCGTTGAGGAATCAGGTGAGGAAGGAGAAAGGATTTGAAGCTCTAAGATAG

Homology

[Close]

BLAST of CmoCh04G009960 vs. TrEMBL
Match: A0A0A0L572_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G088990 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.1e-67
Identity = 138/163 (84.66%), Postives = 145/163 (88.96%), Query Frame = 1


Query: 8   HNFTFFFYISLLSLPLRLPHSLSL-SSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEV 67
           H   F FYISL+SL L  P SLSL S+TIHDLLRS+GLP GLLPKEVKSY+LS NGLL+V
Sbjct: 7   HFSIFIFYISLISLSL--PSSLSLSSTTIHDLLRSKGLPPGLLPKEVKSYSLSPNGLLKV 66

Query: 68  FLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLIL 127
           FLDGPCLTKYENRV+FESVV ANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLIL
Sbjct: 67  FLDGPCLTKYENRVIFESVVTANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLIL 126

Query: 128 FDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR 170
           FDIGVAHKQLALSLFEDPPSCK+Q K  LRN VRKEKGFE  R
Sbjct: 127 FDIGVAHKQLALSLFEDPPSCKSQSKGVLRNHVRKEKGFEGFR 167

[Close]

BLAST of CmoCh04G009960 vs. TrEMBL
Match: A0A061F5S5_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_031177 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.8e-59
Identity = 123/157 (78.34%), Postives = 135/157 (85.99%), Query Frame = 1


Query: 13  FFYISLLSLPLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPC 72
           +F+I   SL L        SS+IHDLL S+GLPAGLLPKEVKSYTLS+NG LEVFLDGPC
Sbjct: 18  WFFIFFCSLTLS-------SSSIHDLLVSRGLPAGLLPKEVKSYTLSENGTLEVFLDGPC 77

Query: 73  LTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVA 132
           LTKYENRV F+SVVRANL+YGSLIGV GLTQEELFLWLPVKDIIVDDPKSGLILFDIGVA
Sbjct: 78  LTKYENRVFFDSVVRANLTYGSLIGVVGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVA 137

Query: 133 HKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR 170
           HKQL+LSLFE+PP CK  P+  L+N VRKEKGFEA+R
Sbjct: 138 HKQLSLSLFEEPPDCK--PQGMLKNHVRKEKGFEAVR 165

[Close]

BLAST of CmoCh04G009960 vs. TrEMBL
Match: M5WJA9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012441mg PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 5.3e-59
Identity = 128/168 (76.19%), Postives = 141/168 (83.93%), Query Frame = 1


Query: 7   FHNFTFFFYISLLS----LPLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNG 66
           F+   +FF+I++      + L LP SLS SS+IHDLL SQGLPAGLLPKEVKSYTLS NG
Sbjct: 4   FNTSHYFFFITVFPWTFLIFLSLPLSLS-SSSIHDLLISQGLPAGLLPKEVKSYTLSDNG 63

Query: 67  LLEVFLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKS 126
            L+VFLDGPCLTK+ENRV FESVVRANLSYGSLIGV+GLTQEELFLWLPVKDIIVDDP+S
Sbjct: 64  QLQVFLDGPCLTKFENRVFFESVVRANLSYGSLIGVEGLTQEELFLWLPVKDIIVDDPRS 123

Query: 127 GLILFDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEK-GFEALR 170
           GLILFDIGVAHKQL+LSLFEDPP CK      L+N VRKEK GFE LR
Sbjct: 124 GLILFDIGVAHKQLSLSLFEDPPDCKPS-SGVLKNHVRKEKAGFEGLR 169

[Close]

BLAST of CmoCh04G009960 vs. TrEMBL
Match: A0A151RKY7_CAJCA (Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_035404 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.6e-58
Identity = 120/151 (79.47%), Postives = 132/151 (87.42%), Query Frame = 1


Query: 19  LSLPLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYEN 78
           LSL L L  SLS SS+IHDLLRS+GLP GLLP+EVKSYT SQNG LEVFL+ PCLTKYEN
Sbjct: 11  LSLSLLLHLSLSSSSSIHDLLRSKGLPPGLLPEEVKSYTFSQNGHLEVFLEAPCLTKYEN 70

Query: 79  RVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLAL 138
           RVLF+ VV ANL+YGSLIGVQGL QEELF+WLPVKDIIV+DP SGLILFDIG+A+KQL+L
Sbjct: 71  RVLFQQVVTANLTYGSLIGVQGLQQEELFVWLPVKDIIVNDPSSGLILFDIGLAYKQLSL 130

Query: 139 SLFEDPPSCKAQPKEALRNQVRKEKGFEALR 170
           SLFEDPP CK  P+  LRN VRKEKGFEALR
Sbjct: 131 SLFEDPPHCK--PQGGLRNHVRKEKGFEALR 159

[Close]

BLAST of CmoCh04G009960 vs. TrEMBL
Match: A0A0B0MY61_GOSAR (Serine protease 45 OS=Gossypium arboreum GN=F383_28763 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 6.5e-57
Identity = 123/159 (77.36%), Postives = 134/159 (84.28%), Query Frame = 1


Query: 12  FFFYISLLSLPLRLPHSLSLSS-TIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDG 71
           FF +I + S  L LP S S SS +IHDLL S+GLPAGLLPKEVKSYTLS NG LEV LD 
Sbjct: 28  FFLFIIIFSF-LFLPSSFSSSSPSIHDLLVSRGLPAGLLPKEVKSYTLSDNGTLEVLLDE 87

Query: 72  PCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIG 131
           PCLTKYENRV F+SVVRANLSYGSLIGV GL+QEELFLWLPVKDIIV+DP SGLILFDIG
Sbjct: 88  PCLTKYENRVFFDSVVRANLSYGSLIGVVGLSQEELFLWLPVKDIIVNDPTSGLILFDIG 147

Query: 132 VAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR 170
           +AHKQL+LSLFEDPP CK  P+  L+N VRKEKGFE LR
Sbjct: 148 LAHKQLSLSLFEDPPLCK--PQGILKNNVRKEKGFEGLR 183

[Close]

BLAST of CmoCh04G009960 vs. TAIR10
Match: AT5G54530.1 (AT5G54530.1 Protein of unknown function, DUF538)

HSP 1 Score: 189.9 bits (481), Expect = 1.3e-48
Identity = 97/152 (63.82%), Postives = 120/152 (78.95%), Query Frame = 1


Query: 18  LLSLPLRLPHSLSLSS--TIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTK 77
           LL   LRL  SLS  S  T+HD+LRS+GLPAGLLP+EV SY L  +G LEVFL  PC  K
Sbjct: 10  LLLTTLRLSLSLSSPSYPTVHDVLRSEGLPAGLLPQEVDSYILHNDGRLEVFLAAPCYAK 69

Query: 78  YENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQ 137
           +E  V FE+VVR NLSYGSL+GV+GL+Q+ELFLWL VKDI+V++P SG+I+FDIGVA KQ
Sbjct: 70  FETNVHFEAVVRGNLSYGSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQ 129

Query: 138 LALSLFEDPPSCKAQPKEALRNQVRKEKGFEA 168
           L+LSLFEDPP CK  P   L+ ++R+++GFEA
Sbjct: 130 LSLSLFEDPPKCK--PDGVLKKKMRRDRGFEA 159

[Close]

BLAST of CmoCh04G009960 vs. TAIR10
Match: AT1G61667.1 (AT1G61667.1 Protein of unknown function, DUF538)

HSP 1 Score: 161.0 bits (406), Expect = 6.4e-40
Identity = 82/147 (55.78%), Postives = 106/147 (72.11%), Query Frame = 1


Query: 18  LLSLPLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLS-QNGLLEVFLDGPCLTKY 77
           LL +P   P S    S+I +LL ++GLP GL P  V+SY+L  + G LEV L  PC  ++
Sbjct: 8   LLLVPFITPSS---QSSIRNLLEARGLPGGLFPDNVESYSLDDKTGELEVQLQNPCFARF 67

Query: 78  ENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQL 137
           ENRV F+ V++ANLSYG L+G++GLTQEELFLWLPVK I V+DP SGL+LFDIGVAHKQ+
Sbjct: 68  ENRVYFDRVIKANLSYGGLVGLEGLTQEELFLWLPVKGIAVNDPSSGLVLFDIGVAHKQI 127

Query: 138 ALSLFEDPPSCKAQPKEALRNQVRKEK 164
           + SLFEDPP C   P  ++  ++ K K
Sbjct: 128 SRSLFEDPPVC--YPPGSIMEKLEKSK 149

[Close]

BLAST of CmoCh04G009960 vs. TAIR10
Match: AT3G07460.2 (AT3G07460.2 Protein of unknown function, DUF538)

HSP 1 Score: 109.4 bits (272), Expect = 2.2e-24
Identity = 53/133 (39.85%), Postives = 82/133 (61.65%), Query Frame = 1


Query: 18  LLSLPLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLS-QNGLLEVFLDGPCLTKY 77
           +L+  + +   ++ + +I ++L + GLP GL PK VK +T++ + G   V+L+  C  KY
Sbjct: 13  VLAAGISISAVIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYLNQSCQAKY 72

Query: 78  ENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQL 137
           E  + ++ +V   + Y  +  + G++ +ELFLWL VK I VD P SGLI FD+GV  KQ 
Sbjct: 73  ETELHYDEIVSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQY 132

Query: 138 ALSLFEDPPSCKA 150
           +LSLFE P  C A
Sbjct: 133 SLSLFETPRDCVA 145

[Close]

BLAST of CmoCh04G009960 vs. TAIR10
Match: AT5G16380.1 (AT5G16380.1 Protein of unknown function, DUF538)

HSP 1 Score: 107.5 bits (267), Expect = 8.4e-24
Identity = 62/139 (44.60%), Postives = 83/139 (59.71%), Query Frame = 1


Query: 13  FFYISLLSLPLRLPHSLSLSS-TIHDLLRSQGLPAGLLPKEVKSYTLS-QNGLLEVFLDG 72
           FF I +L   +  P   SL   + +D LR   LPAG++PK V ++++  + G   V L  
Sbjct: 8   FFLIIVLFSSILFPQLSSLPDPSFYDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVALPV 67

Query: 73  PCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIG 132
           PC  K+EN+  F+  +   LS G +  + G+TQ+ELFLW  VK I VD   SGLI FD+G
Sbjct: 68  PCDAKFENQFHFDYNISGVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFDVG 127

Query: 133 VAHKQLALSLFEDPPSCKA 150
           VA KQL+LSLFE P  C A
Sbjct: 128 VADKQLSLSLFESPRDCTA 146

[Close]

BLAST of CmoCh04G009960 vs. TAIR10
Match: AT3G07470.1 (AT3G07470.1 Protein of unknown function, DUF538)

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-23
Identity = 51/135 (37.78%), Postives = 81/135 (60.00%), Query Frame = 1


Query: 14  FYISLLSLPLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLS-QNGLLEVFLDGPC 73
           F   +L   + +  ++S + TI+++L + GLP+G+ PK V+ +T   + G   V+L+  C
Sbjct: 10  FLCLVLVAGISISTAISETETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQAC 69

Query: 74  LTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVA 133
             KYE  + +++ +   +    +  + G++ +ELFLW PVK I VD P SGLI FD+GV 
Sbjct: 70  EAKYETEIHYDANITGTIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVV 129

Query: 134 HKQLALSLFEDPPSC 148
            KQ +LSLFE P  C
Sbjct: 130 RKQYSLSLFETPRDC 144

[Close]

BLAST of CmoCh04G009960 vs. NCBI nr
Match: gi|659102834|ref|XP_008452337.1| (PREDICTED: uncharacterized protein LOC103493397 [Cucumis melo])

HSP 1 Score: 263.8 bits (673), Expect = 2.0e-67
Identity = 138/163 (84.66%), Postives = 145/163 (88.96%), Query Frame = 1


Query: 8   HNFTFFFYISLLSLPLRLPHSLSL-SSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEV 67
           H   F FYISL+SL L  P SLSL S+TIHDLLRS+GLP GLLPKEVKSY+LS NGLL+V
Sbjct: 7   HFSIFIFYISLISLSL--PPSLSLSSTTIHDLLRSKGLPPGLLPKEVKSYSLSPNGLLQV 66

Query: 68  FLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLIL 127
           FLDGPCLTKYENRV+FESVV ANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDP SGLIL
Sbjct: 67  FLDGPCLTKYENRVIFESVVTANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPNSGLIL 126

Query: 128 FDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR 170
           FDIGVAHKQLALSLFEDPPSCK+QPK  LRN VRKEKGFE  R
Sbjct: 127 FDIGVAHKQLALSLFEDPPSCKSQPKGVLRNHVRKEKGFEGFR 167

[Close]

BLAST of CmoCh04G009960 vs. NCBI nr
Match: gi|449464436|ref|XP_004149935.1| (PREDICTED: uncharacterized protein LOC101212020 [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 4.4e-67
Identity = 138/163 (84.66%), Postives = 145/163 (88.96%), Query Frame = 1


Query: 8   HNFTFFFYISLLSLPLRLPHSLSL-SSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEV 67
           H   F FYISL+SL L  P SLSL S+TIHDLLRS+GLP GLLPKEVKSY+LS NGLL+V
Sbjct: 7   HFSIFIFYISLISLSL--PSSLSLSSTTIHDLLRSKGLPPGLLPKEVKSYSLSPNGLLKV 66

Query: 68  FLDGPCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLIL 127
           FLDGPCLTKYENRV+FESVV ANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLIL
Sbjct: 67  FLDGPCLTKYENRVIFESVVTANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLIL 126

Query: 128 FDIGVAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR 170
           FDIGVAHKQLALSLFEDPPSCK+Q K  LRN VRKEKGFE  R
Sbjct: 127 FDIGVAHKQLALSLFEDPPSCKSQSKGVLRNHVRKEKGFEGFR 167

[Close]

BLAST of CmoCh04G009960 vs. NCBI nr
Match: gi|470116295|ref|XP_004294318.1| (PREDICTED: uncharacterized protein LOC101314354 [Fragaria vesca subsp. vesca])

HSP 1 Score: 237.3 bits (604), Expect = 2.0e-59
Identity = 123/153 (80.39%), Postives = 137/153 (89.54%), Query Frame = 1


Query: 18  LLSLPLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYE 77
           LL++ L LP SLS SS+IHDLLRSQGLPAGLLPKEVKSY+LS +GLL+VFLD PCLTK+E
Sbjct: 13  LLTVLLSLPLSLSSSSSIHDLLRSQGLPAGLLPKEVKSYSLSDDGLLQVFLDAPCLTKFE 72

Query: 78  NRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLA 137
           NRV F+SVVRANLSYGSLIGV+GLTQEELFLWLPVKDIIVDDP SGLILFDIGVAHKQL+
Sbjct: 73  NRVFFDSVVRANLSYGSLIGVEGLTQEELFLWLPVKDIIVDDPGSGLILFDIGVAHKQLS 132

Query: 138 LSLFEDPPSCKAQPKEALRNQVRKE-KGFEALR 170
           LSLFEDPPSCK      ++N V+K+ KGFEALR
Sbjct: 133 LSLFEDPPSCKPS-GAVVKNHVKKQGKGFEALR 164

[Close]

BLAST of CmoCh04G009960 vs. NCBI nr
Match: gi|590607997|ref|XP_007021145.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 236.9 bits (603), Expect = 2.6e-59
Identity = 123/157 (78.34%), Postives = 135/157 (85.99%), Query Frame = 1


Query: 13  FFYISLLSLPLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPC 72
           +F+I   SL L        SS+IHDLL S+GLPAGLLPKEVKSYTLS+NG LEVFLDGPC
Sbjct: 18  WFFIFFCSLTLS-------SSSIHDLLVSRGLPAGLLPKEVKSYTLSENGTLEVFLDGPC 77

Query: 73  LTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVA 132
           LTKYENRV F+SVVRANL+YGSLIGV GLTQEELFLWLPVKDIIVDDPKSGLILFDIGVA
Sbjct: 78  LTKYENRVFFDSVVRANLTYGSLIGVVGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVA 137

Query: 133 HKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR 170
           HKQL+LSLFE+PP CK  P+  L+N VRKEKGFEA+R
Sbjct: 138 HKQLSLSLFEEPPDCK--PQGMLKNHVRKEKGFEAVR 165

[Close]

BLAST of CmoCh04G009960 vs. NCBI nr
Match: gi|1009110806|ref|XP_015897717.1| (PREDICTED: uncharacterized protein LOC107431343 [Ziziphus jujuba])

HSP 1 Score: 236.1 bits (601), Expect = 4.5e-59
Identity = 116/140 (82.86%), Postives = 131/140 (93.57%), Query Frame = 1


Query: 30  SLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPCLTKYENRVLFESVVRAN 89
           S SS+IHDLLRS+GLPAGL+PKEVKSYTLS++G LEVF+DGPC+TK+ENRV+F+SV+RAN
Sbjct: 24  SFSSSIHDLLRSKGLPAGLVPKEVKSYTLSEDGYLEVFIDGPCMTKFENRVVFDSVLRAN 83

Query: 90  LSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLALSLFEDPPSCKA 149
           LSYGSLIGV GLTQEELFLWLPVKDIIVDDP+SGLILFDI VAHKQL+LSLFEDPP CK 
Sbjct: 84  LSYGSLIGVVGLTQEELFLWLPVKDIIVDDPRSGLILFDIVVAHKQLSLSLFEDPPDCK- 143

Query: 150 QPKEALRNQVRKEKGFEALR 170
            P+ ALRN VRKE+GFEALR
Sbjct: 144 -PQGALRNHVRKERGFEALR 161

The following BLAST results are available for this feature:

BLAST of CmoCh04G009960 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G009960 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L572_CUCSA	3.1e-67	84.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G088990 PE=4 SV=1	[more]
A0A061F5S5_THECC	1.8e-59	78.34	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_031177 PE=4 SV=1	[more]
M5WJA9_PRUPE	5.3e-59	76.19	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012441mg PE=4 SV=1	[more]
A0A151RKY7_CAJCA	2.6e-58	79.47	Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_035404 PE=4 SV=1	[more]
A0A0B0MY61_GOSAR	6.5e-57	77.36	Serine protease 45 OS=Gossypium arboreum GN=F383_28763 PE=4 SV=1	[more]

BLAST of CmoCh04G009960 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54530.1	1.3e-48	63.82	Protein of unknown function, DUF538	[more]
AT1G61667.1	6.4e-40	55.78	Protein of unknown function, DUF538	[more]
AT3G07460.2	2.2e-24	39.85	Protein of unknown function, DUF538	[more]
AT5G16380.1	8.4e-24	44.60	Protein of unknown function, DUF538	[more]
AT3G07470.1	1.1e-23	37.78	Protein of unknown function, DUF538	[more]

BLAST of CmoCh04G009960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102834\|ref\|XP_008452337.1\|	2.0e-67	84.66	PREDICTED: uncharacterized protein LOC103493397 [Cucumis melo]	[more]
gi\|449464436\|ref\|XP_004149935.1\|	4.4e-67	84.66	PREDICTED: uncharacterized protein LOC101212020 [Cucumis sativus]	[more]
gi\|470116295\|ref\|XP_004294318.1\|	2.0e-59	80.39	PREDICTED: uncharacterized protein LOC101314354 [Fragaria vesca subsp. vesca]	[more]
gi\|590607997\|ref\|XP_007021145.1\|	2.6e-59	78.34	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]
gi\|1009110806\|ref\|XP_015897717.1\|	4.5e-59	82.86	PREDICTED: uncharacterized protein LOC107431343 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007493	DUF538

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G009960.1	CmoCh04G009960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	GENE3D	G3DSA:2.30.240.10		coord: 32..151 score: 6.4
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 36..142 score: 1.9
IPR007493	Protein of unknown function DUF538	unknown	SSF141562	At5g01610-like	coord: 5..149 score: 2.62
None	No IPR available	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 3..166 score: 3.9
None	No IPR available	PANTHER	PTHR31676:SF9	SUBFAMILY NOT NAMED	coord: 3..166 score: 3.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G009960	Cucsa.074200	Cucumber (Gy14) v1	cgycmoB0118
CmoCh04G009960	CmaCh04G009260	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G009960	Cla003830	Watermelon (97103) v1	cmowmB653
CmoCh04G009960	Csa3G088990	Cucumber (Chinese Long) v2	cmocuB693
CmoCh04G009960	MELO3C016608	Melon (DHL92) v3.5.1	cmomeB680
CmoCh04G009960	ClCG10G006100	Watermelon (Charleston Gray)	cmowcgB615
CmoCh04G009960	CSPI03G05570	Wild cucumber (PI 183967)	cmocpiB703
CmoCh04G009960	Lsi05G006480	Bottle gourd (USVL1VR-Ls)	cmolsiB684
CmoCh04G009960	Cp4.1LG01g08300	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G009960	MELO3C016608.2	Melon (DHL92) v3.6.1	cmomedB775
CmoCh04G009960	CsaV3_3G005670	Cucumber (Chinese Long) v3	cmocucB0822
CmoCh04G009960	Cla97C10G190180	Watermelon (97103) v2	cmowmbB689
CmoCh04G009960	Bhi11G000549	Wax gourd	cmowgoB0817
CmoCh04G009960	CsGy3G005700	Cucumber (Gy14) v2	cgybcmoB393
CmoCh04G009960	Carg24836	Silver-seed gourd	carcmoB1070
CmoCh04G009960	Carg00043	Silver-seed gourd	carcmoB0923

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G009960	CmoCh16G009270	Cucurbita moschata (Rifu)	cmocmoB290

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G009960	Cucurbita moschata (Rifu)	cmocmoB285
CmoCh04G009960	Cucurbita maxima (Rimu)	cmacmoB337
CmoCh04G009960	Bottle gourd (USVL1VR-Ls)	cmolsiB678