CmoCh04G009720 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G009720
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description3-deoxy-manno-octulosonate cytidylyltransferase
LocationCmo_Chr04 : 4942225 .. 4945321 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGTTGGATCAGTTCTCGTAGGTTGAACTTTCAACTCTTGTATTTATTTCCATAGAATGTTGTATTTGATGGAATTTGATTTGCATTGGCTGGTGGGCTGTTGTAGATTTGTACTTTGTATGATTTAACTGACATCATAGATCATTCGGATCTTAGTTTATCTTTCTAAAGAGCTAATAGTCATTAAATCAACATTTTTCTGGTGTTAGATGTTGATTTACTTTGCAGTACGAGTGATGAAGCCTACGACATTGGCTTATGTTTTTATATTGTTCATGTTTTGAATCTGCCAAAATTTTAATATGCCTATGAAATTCATATTCTACAGAGAACTTGGGAAAGGGCAAAAATGGCTACTACATTGGATTGTGTTGGTAAGCATGTGTGCTTTGTTCTTCTTGCTTTATGCGTACCTCATCCTTACCTTTCGATTTGAAATCTTTCCAGTTGTAGCAACCGACGATGCAAAGATTGCACAATGCTGTAAAGGATTTGGTGCTGATGTTGTAATGACATCAGAGTCTTGCCGGAATGGTAAGCACTGTGATTATTATATAACAATCTCGAGATTAGTATTGAAGTCTTATTATTTTCAGTATGAAACTACTTTAGGAACTGAACGTTGTAATGAAGCACTTCAGAAGCTGGAGAAGAAATACGATATCGTTGTAAATATTCAAGGAGATGAGCCGCTTATCGAACCGGAGATCATCGATGGCATTGTTAAAGCTCTACAGGTGAAAGTTTTCGTACCTTTTTGGTTAAAATGGCAGGATTGAAAGTTTGATGTTGCATTAAAAGACTCCATACTAATAAATGGACAGTTATGAACTTGCTCCCCTCAAGCTCTTGTTCTGTATGGTGTGCAGGCTGCCCCGGATGCAGTGTTCAGCACTGCAGTGACATCCTTAAAACCTGAAGATGCATTCGACCCCAATCGCGTGAAGTGTGTAGTGGATAATCATGGATACGCTATTTATTTTTCAAGAGGATTGATCCCTTTCAACAAGTAAGATTTCCTTTTCCATCTTGGGTTTCCCTTGTGTTATTTGATTGTTCCAGTTCGAGGTCAGGTTGCAGCGTCCATTATAGATAGGTTCGAGTTGTCGGGAAATTTAACGAGTTACATCAATTCATTGATGCAGGTCAGGAAAGGTCAACCTTCAATATCCTTATTTGCTTCATCTTGGAATCCAGGTATTAATGGATTGTATACGAGATGAATTCATTTTGCTGTAATGCCAGACTGAAGGAACATTCCTTTTTCTTCTATTTTCCTTTCCAGAGTTTTGATTCGAAATTTTTAAGTATATATCCTGAACTCCAATCAACACCATTGCAACTAGAGGAGGATTTAGAACAGCTAAAAGTGTTAGAACATGGCTACAAAATGAAGGTACACCTCAACTTCTTATGTACATAGCATCTTTTCCCACTTTTGGGAAATTTGTATACTTTATAAAACCAGGCATTTTTGTTCTTCTGTTTAGAATAACTTTTGAAATGGAATCATTTTTTAATATAGTTAACCAAACAAATTTGTTATTTAAAGCATTTTTTTAAAGAACAAATGTAAGATATGGAAACTTTTTTATCAAAAGTATTTCTTCAAAAAAGTGTTTAAACTTACACTTAGATGGAGACGAGCGTACGCATAAAGATAATCGATCCAAGTTTCATATCTTGTCTGGGAAAGAAGTTGTGTGTTTTCACTTGTGAAAAGGTATGGTGCTCCAATGTTGAAACTGTCATTTTGTTTTGCAGGTGATTAAGGTCGACCACGAGGCGCACGGTGTTGATGTTCCTGGAGATGTAGAAAAGATAGAATCTTTTATGAAGGAAAGGAACCTTTCTTAATGAAGATTAACCAAAGAAAGCTATACTTTCGAATTGAATTTCGTTTTCGTTATTAGTAGTTGTAATTGGTATCGGGTTGAACAAATATGCTGTTATTTTGTGGTGTTGAAGTACTTTGTTTTTTCAGAACTATATCTTTTAGCTCTTCGTTTCTGATACTTGTGACATATTGATTTATTTGTATAGTTATTGAAGTAAATTTGTTGATTAATGAGTTAGCTTAGGTTCATTTTAATTTGTTGTGTTAAATTATGATACTTGGAGTTGGAACCCAGGTGCCTATTCTATTCTTTTTACATTAAACATGGAGATTCAGATGCCCATTGTTAAGACAGCTCACTGAACGCATGTGAGCTGAGCTCATTTGGGCAACTTCGACTGCAATATGCTATCATTGTTTAGACAAAGAATATGGAGATGCACAAGCAAGTTCAAGTAATCAAGGAGGAAACACACAGGAGTTCAAACGCTTTGAGACTATGACAAATTCTAGCTGGTTAGCTGACAAGGATATTAGTTGCCACGATAATGCTTGTCTAAGATGGCTTGTGGCTACATGTTGGATATCTTGGTCATGCTTGTCTTAGGACGGGTTGTCCATGATCGTAGTTATGCTTGTCTAGGATATTTTGTAGGTCGCATGTCGGATGTCTCGGTCATGTTTGTTTAAGACGTATTGTCCATGAATCTATGCCTGTTCCAAATTTCTTTTACTTGCTTTCATGTTAGATAAAACTTTACTACTTGTTGAGTTAATACGGGATGTATGATCGGTCACCAAAATCATGTCTAACACCTATCAGAGCTAAAATGCCCCGAAGTGAGAAACGTGATTAATTATCAATTCTTACTCTCTCAATTATATGCCATGAAAGTTATTGTTCTTACGTTATGTGACATGAACTATGATCGTTATTGTTCTTAGGTTCTTTGACATGAGCTATGGAAGTTATTGTTCTTAACTTCTTTGACATGAGGTATGAAAGTTATTGTTGTTAGCTGTTTGAGTTGGTAGAACATTGTGTTCCATTTCCAACATAAATAATTTAGAAATGCCACCGTCATCCACGCGTTACATTTCTATTCGTCTGTATTTAGACCTGCATCAACGTCACGTCAATTTCTCACCCTTCCGGACTTCTTTCAGTGCCACGTCAATCCAAAAACTCAACTACAAATTTTGCCCAAGACCTTCACTCTTTCTCGCCTCGCACTCACAACCACCGTTCTCTCTAA

mRNA sequence

ATGTCGGTTGGATCAGTTCTCGTAGTTGTAGCAACCGACGATGCAAAGATTGCACAATGCTGTAAAGGATTTGGTGCTGATGTTGTAATGACATCAGAGTCTTGCCGGAATGGAACTGAACGTTGTAATGAAGCACTTCAGAAGCTGGAGAAGAAATACGATATCGTTGTAAATATTCAAGGAGATGAGCCGCTTATCGAACCGGAGATCATCGATGGCATTGTTAAAGCTCTACAGGCTGCCCCGGATGCAGTGTTCAGCACTGCAGTGACATCCTTAAAACCTGAAGATGCATTCGACCCCAATCGCGTGAAGTCAGGAAAGGTCAACCTTCAATATCCTTATTTGCTTCATCTTGGAATCCAGAGTTTTGATTCGAAATTTTTAAGTATATATCCTGAACTCCAATCAACACCATTGCAACTAGAGGAGGATTTAGAACAGCTAAAAGTGTTAGAACATGGCTACAAAATGAAGGTGATTAAGGTCGACCACGAGGCGCACGGTGTTGATGTTCCTGGAGATACCTGCATCAACGTCACGTCAATTTCTCACCCTTCCGGACTTCTTTCAGTGCCACGTCAATCCAAAAACTCAACTACAAATTTTGCCCAAGACCTTCACTCTTTCTCGCCTCGCACTCACAACCACCGTTCTCTCTAA

Coding sequence (CDS)

ATGTCGGTTGGATCAGTTCTCGTAGTTGTAGCAACCGACGATGCAAAGATTGCACAATGCTGTAAAGGATTTGGTGCTGATGTTGTAATGACATCAGAGTCTTGCCGGAATGGAACTGAACGTTGTAATGAAGCACTTCAGAAGCTGGAGAAGAAATACGATATCGTTGTAAATATTCAAGGAGATGAGCCGCTTATCGAACCGGAGATCATCGATGGCATTGTTAAAGCTCTACAGGCTGCCCCGGATGCAGTGTTCAGCACTGCAGTGACATCCTTAAAACCTGAAGATGCATTCGACCCCAATCGCGTGAAGTCAGGAAAGGTCAACCTTCAATATCCTTATTTGCTTCATCTTGGAATCCAGAGTTTTGATTCGAAATTTTTAAGTATATATCCTGAACTCCAATCAACACCATTGCAACTAGAGGAGGATTTAGAACAGCTAAAAGTGTTAGAACATGGCTACAAAATGAAGGTGATTAAGGTCGACCACGAGGCGCACGGTGTTGATGTTCCTGGAGATACCTGCATCAACGTCACGTCAATTTCTCACCCTTCCGGACTTCTTTCAGTGCCACGTCAATCCAAAAACTCAACTACAAATTTTGCCCAAGACCTTCACTCTTTCTCGCCTCGCACTCACAACCACCGTTCTCTCTAA
Homology
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BLAST of CmoCh04G009720 vs. Swiss-Prot
Match: KDSB_ARATH (3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial OS=Arabidopsis thaliana GN=KDSB PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.5e-75
Identity = 143/189 (75.66%), Postives = 155/189 (82.01%), Query Frame = 1 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           +VVATDD +IA+CC+GFGADV+MTSESCRNGTERCNEAL+KLEKKYD+VVNIQGDEPLIE
Sbjct: 88  IVVATDDERIAECCRGFGADVIMTSESCRNGTERCNEALEKLEKKYDVVVNIQGDEPLIE 147

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDG+VKALQ  PDAVFSTAVTSLKPED  DPNRV                     KS
Sbjct: 148 PEIIDGVVKALQVTPDAVFSTAVTSLKPEDGLDPNRVKCVVDNRGYAIYFSRGLIPYNKS 207

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           GKVN  +PY+LHLGIQSFDSKFL +Y ELQ TPLQ EEDLEQLKVLE+GYKMKVIKVDHE
Sbjct: 208 GKVNPDFPYMLHLGIQSFDSKFLKVYSELQPTPLQQEEDLEQLKVLENGYKMKVIKVDHE 267

[Close]
BLAST of CmoCh04G009720 vs. Swiss-Prot
Match: KDSB_PARUW (3-deoxy-manno-octulosonate cytidylyltransferase OS=Protochlamydia amoebophila (strain UWE25) GN=kdsB PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.2e-25
Identity = 79/192 (41.15%), Postives = 98/192 (51.04%), Query Frame = 1 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEK--KYDIVVNIQGDEPL 67
           ++VATDD +I +  + F   VVMTSE C  GT+R  E L    +      +VNIQGDEP 
Sbjct: 53  LIVATDDERIFEHVRSFNGKVVMTSEQCPTGTDRLAEVLSLYPEWMHATAIVNIQGDEPC 112

Query: 68  IEPEIIDGIVKALQAAPDAVFSTAVTSLKPEDA-------------------FDPNRVKS 127
           + P  I+  V+AL   P    ST VT L  E+                    F    + S
Sbjct: 113 LNPLTINLAVQALVNDPQGQVSTIVTPLLDEEEAKNSSIVKCVMDQQGNALYFSRALIPS 172

Query: 128 GKVNL---QYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKV 176
            K N       Y  HLG+  +   F+  Y +L STPLQLEEDLEQLKVLEHGY++KV  V
Sbjct: 173 NKTNSFKNGAIYFRHLGLYVYRPSFIINYQKLPSTPLQLEEDLEQLKVLEHGYRIKVAIV 232

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BLAST of CmoCh04G009720 vs. Swiss-Prot
Match: KDSB_PARD8 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=kdsB PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.8e-23
Identity = 74/197 (37.56%), Postives = 103/197 (52.28%), Query Frame = 1 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           V VATDD +I    K FG  VVMTS+  R+GT+RC EA QK+ + YD++VNIQGDEP I 
Sbjct: 45  VCVATDDIRIENAVKAFGGQVVMTSDQHRSGTDRCYEAYQKIGEGYDVIVNIQGDEPFIH 104

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPN--RVKSGKVNLQ------------Y 127
           PE I  I K   A  +   +T V   + +D F+ +     S KV L              
Sbjct: 105 PEQIQTI-KTCFADANTQIATLVKPFRSDDDFESSLFNPNSPKVVLNKNNEAMYFSRSII 164

Query: 128 PYLL---------------HLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKM 176
           PY+                H+G+ ++ ++ L    +L  + L+L E LEQL+ LE+GYK+
Sbjct: 165 PYIRGKKYTEWLPSHTFYKHIGLYAYRAQVLKEITQLPQSALELAESLEQLRWLENGYKI 224

[Close]
BLAST of CmoCh04G009720 vs. Swiss-Prot
Match: KDSB_CHLMU (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia muridarum (strain MoPn / Nigg) GN=kdsB PE=3 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 3.9e-23
Identity = 76/187 (40.64%), Postives = 97/187 (51.87%), Query Frame = 1 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           VVVATDD +I      FG   VMT ESC NGTER  EA+ +   + +IVVNIQGDEP + 
Sbjct: 52  VVVATDDQRIFDHVVEFGGLCVMTCESCANGTERVEEAVSQHFPQAEIVVNIQGDEPCLS 111

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV------KSGKV------------ 127
           P IIDG+V+ L+  P    +T VT     DA   N        K+G+             
Sbjct: 112 PSIIDGLVEMLEGNPAIDIATPVTETVDPDAILTNHKVKCVFDKTGRALYFSRSVIPNNF 171

Query: 128 NLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDH-EAH 176
               P  LH+G+ +F   FLS Y ++  + L L EDLEQL+VLE G  + V  V +    
Sbjct: 172 KRSTPIYLHIGVYAFRRAFLSEYVKIPPSSLSLAEDLEQLRVLESGRSIYVHVVQNATGP 231

[Close]
BLAST of CmoCh04G009720 vs. Swiss-Prot
Match: KDSB_CHLTR (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=kdsB PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 6.7e-23
Identity = 77/187 (41.18%), Postives = 102/187 (54.55%), Query Frame = 1 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           VVVATDD +I      FG   VMTS SC NGTER  E + +   + +IVVNIQGDEP + 
Sbjct: 52  VVVATDDQRIFDHVVEFGGLCVMTSTSCANGTERVEEVVSRHFPQAEIVVNIQGDEPCLS 111

Query: 68  PEIIDGIVKALQAAPDAVFSTAVT-SLKPEDAFDPNRV-----KSGKV----------NL 127
           P +IDG+V  L+  P A   T+VT +  PE     ++V     K+GK           N 
Sbjct: 112 PTVIDGLVSTLENNPAADMVTSVTETTDPEAILTDHKVKCVFDKNGKALYFSRSAIPHNF 171

Query: 128 QY--PYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDH-EAH 176
           ++  P  LH+G+ +F   FLS Y ++  + L L EDLEQL+VLE G  + V  V +    
Sbjct: 172 KHPTPIYLHIGVYAFRKAFLSEYVKIPPSSLSLAEDLEQLRVLEIGRSIYVHVVQNATGP 231

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BLAST of CmoCh04G009720 vs. TrEMBL
Match: A0A0A0L2M7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104930 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 3.0e-86
Identity = 163/168 (97.02%), Postives = 167/168 (99.40%), Query Frame = 1 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           VVVATDDA+IAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE
Sbjct: 95  VVVATDDARIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 154

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKSGKVNLQYPYLLHLGIQSFDSK 127
           PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKSGKVNLQYPYLLHLGIQSFDSK
Sbjct: 155 PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKSGKVNLQYPYLLHLGIQSFDSK 214

Query: 128 FLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPGD 176
           FLS+YPEL+STPLQLEEDLEQLKVLEHGYKMKVIKV+HEAHGVDVP D
Sbjct: 215 FLSMYPELESTPLQLEEDLEQLKVLEHGYKMKVIKVEHEAHGVDVPED 262

[Close]
BLAST of CmoCh04G009720 vs. TrEMBL
Match: B9HZV4_POPTR (Cytidylyltransferase family protein OS=Populus trichocarpa GN=POPTR_0011s12080g PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 6.6e-78
Identity = 152/189 (80.42%), Postives = 163/189 (86.24%), Query Frame = 1 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           +VVATDD KIA+CC+GFGADVVMTSESCRNGTERCNEALQKL+KKYD+VVNIQGDEPLIE
Sbjct: 91  IVVATDDEKIAECCRGFGADVVMTSESCRNGTERCNEALQKLDKKYDVVVNIQGDEPLIE 150

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDGIVK+LQAAPDAVFSTAVTSLKPEDAFDPNRV                     KS
Sbjct: 151 PEIIDGIVKSLQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNQGYAIYFSRGLIPYNKS 210

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           GKVN Q+PYLLHLGIQS+D+KFL IYPELQ TPLQLEEDLEQLKVLE+GYKMKVIKVDHE
Sbjct: 211 GKVNPQFPYLLHLGIQSYDAKFLKIYPELQPTPLQLEEDLEQLKVLENGYKMKVIKVDHE 270

[Close]
BLAST of CmoCh04G009720 vs. TrEMBL
Match: A0A059BN69_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01118 PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 8.7e-78
Identity = 153/189 (80.95%), Postives = 162/189 (85.71%), Query Frame = 1 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           VVVATDD KIA+CC+GFGADV+MTSESCRNGTERCNEALQKL+KKYDIVVNIQGDEPLIE
Sbjct: 103 VVVATDDEKIAECCRGFGADVIMTSESCRNGTERCNEALQKLDKKYDIVVNIQGDEPLIE 162

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDG+VKALQAAPDAVFSTAVTSLKPEDAFDPNRV                     KS
Sbjct: 163 PEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNRGYAIYFSRGLIPHNKS 222

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           GKVN ++PYLLHLGIQS+DSKFL IYPELQ TPLQLEEDLEQLKVLE+GYKMKVIKVDHE
Sbjct: 223 GKVNPKFPYLLHLGIQSYDSKFLKIYPELQPTPLQLEEDLEQLKVLENGYKMKVIKVDHE 282

[Close]
BLAST of CmoCh04G009720 vs. TrEMBL
Match: A0A067JT27_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20982 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 7.3e-77
Identity = 150/189 (79.37%), Postives = 161/189 (85.19%), Query Frame = 1 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           +VVATDD KIA+CC+GFGADV+MTSESCRNGTERCNEAL KLEKKYD+VVNIQGDEPLIE
Sbjct: 94  IVVATDDEKIAECCRGFGADVIMTSESCRNGTERCNEALGKLEKKYDVVVNIQGDEPLIE 153

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV                     KS
Sbjct: 154 PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNRGYAIYFSRGLIPYNKS 213

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           GKVN Q+PYLLHLGIQS+D+KFL IYPEL+ TPLQLEEDLEQLKVLE+GYKMKV+KVDHE
Sbjct: 214 GKVNQQFPYLLHLGIQSYDAKFLKIYPELEPTPLQLEEDLEQLKVLENGYKMKVMKVDHE 273

[Close]
BLAST of CmoCh04G009720 vs. TrEMBL
Match: M1CCD1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400025035 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 7.3e-77
Identity = 152/189 (80.42%), Postives = 161/189 (85.19%), Query Frame = 1 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           VVVATDD KIA+CC+GFGA+V+MTSESCRNGTERCNEALQKL+KKYDIVVNIQGDEPLIE
Sbjct: 92  VVVATDDEKIAECCRGFGAEVIMTSESCRNGTERCNEALQKLDKKYDIVVNIQGDEPLIE 151

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV                     KS
Sbjct: 152 PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNRGYAIYFSRGLIPYNKS 211

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           GKVN Q+PYLLHLGIQS+D+KFL IYPEL  TPLQLEEDLEQLKVLE+GYKMKVIKVDHE
Sbjct: 212 GKVNPQFPYLLHLGIQSYDTKFLKIYPELTPTPLQLEEDLEQLKVLENGYKMKVIKVDHE 271

[Close]
BLAST of CmoCh04G009720 vs. TAIR10
Match: AT1G53000.1 (AT1G53000.1 Nucleotide-diphospho-sugar transferases superfamily protein)

HSP 1 Score: 283.9 bits (725), Expect = 8.6e-77
Identity = 143/189 (75.66%), Postives = 155/189 (82.01%), Query Frame = 1 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           +VVATDD +IA+CC+GFGADV+MTSESCRNGTERCNEAL+KLEKKYD+VVNIQGDEPLIE
Sbjct: 88  IVVATDDERIAECCRGFGADVIMTSESCRNGTERCNEALEKLEKKYDVVVNIQGDEPLIE 147

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDG+VKALQ  PDAVFSTAVTSLKPED  DPNRV                     KS
Sbjct: 148 PEIIDGVVKALQVTPDAVFSTAVTSLKPEDGLDPNRVKCVVDNRGYAIYFSRGLIPYNKS 207

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           GKVN  +PY+LHLGIQSFDSKFL +Y ELQ TPLQ EEDLEQLKVLE+GYKMKVIKVDHE
Sbjct: 208 GKVNPDFPYMLHLGIQSFDSKFLKVYSELQPTPLQQEEDLEQLKVLENGYKMKVIKVDHE 267

[Close]
BLAST of CmoCh04G009720 vs. NCBI nr
Match: gi|700201107|gb|KGN56240.1| (hypothetical protein Csa_3G104930 [Cucumis sativus])

HSP 1 Score: 326.2 bits (835), Expect = 4.3e-86
Identity = 163/168 (97.02%), Postives = 167/168 (99.40%), Query Frame = 1 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           VVVATDDA+IAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE
Sbjct: 95  VVVATDDARIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 154

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKSGKVNLQYPYLLHLGIQSFDSK 127
           PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKSGKVNLQYPYLLHLGIQSFDSK
Sbjct: 155 PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKSGKVNLQYPYLLHLGIQSFDSK 214

Query: 128 FLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHEAHGVDVPGD 176
           FLS+YPEL+STPLQLEEDLEQLKVLEHGYKMKVIKV+HEAHGVDVP D
Sbjct: 215 FLSMYPELESTPLQLEEDLEQLKVLEHGYKMKVIKVEHEAHGVDVPED 262

[Close]
BLAST of CmoCh04G009720 vs. NCBI nr
Match: gi|449431840|ref|XP_004133708.1| (PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Cucumis sativus])

HSP 1 Score: 313.9 bits (803), Expect = 2.2e-82
Identity = 163/189 (86.24%), Postives = 167/189 (88.36%), Query Frame = 1 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           VVVATDDA+IAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE
Sbjct: 95  VVVATDDARIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 154

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV                     KS
Sbjct: 155 PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDSRGYAIYFSRGLIPFNKS 214

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           GKVNLQYPYLLHLGIQSFDSKFLS+YPEL+STPLQLEEDLEQLKVLEHGYKMKVIKV+HE
Sbjct: 215 GKVNLQYPYLLHLGIQSFDSKFLSMYPELESTPLQLEEDLEQLKVLEHGYKMKVIKVEHE 274

[Close]
BLAST of CmoCh04G009720 vs. NCBI nr
Match: gi|659102683|ref|XP_008452260.1| (PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Cucumis melo])

HSP 1 Score: 308.1 bits (788), Expect = 1.2e-80
Identity = 161/189 (85.19%), Postives = 164/189 (86.77%), Query Frame = 1 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEAL KLEKKYDIVVNIQGDEPLIE
Sbjct: 95  VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALHKLEKKYDIVVNIQGDEPLIE 154

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDGIVKALQAAPDAVFSTAVTSLK EDAFDPNRV                     KS
Sbjct: 155 PEIIDGIVKALQAAPDAVFSTAVTSLKSEDAFDPNRVKCVVDSRGYAIYFSRGLIPFNKS 214

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           GKVNLQ+PYLLHLGIQS+DSKFLSIYPEL+ TPLQLEEDLEQLKVLEHGYKMKVIKVDHE
Sbjct: 215 GKVNLQFPYLLHLGIQSYDSKFLSIYPELEPTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 274

[Close]
BLAST of CmoCh04G009720 vs. NCBI nr
Match: gi|224114948|ref|XP_002316900.1| (cytidylyltransferase family protein [Populus trichocarpa])

HSP 1 Score: 298.5 bits (763), Expect = 9.5e-78
Identity = 152/189 (80.42%), Postives = 163/189 (86.24%), Query Frame = 1 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           +VVATDD KIA+CC+GFGADVVMTSESCRNGTERCNEALQKL+KKYD+VVNIQGDEPLIE
Sbjct: 91  IVVATDDEKIAECCRGFGADVVMTSESCRNGTERCNEALQKLDKKYDVVVNIQGDEPLIE 150

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDGIVK+LQAAPDAVFSTAVTSLKPEDAFDPNRV                     KS
Sbjct: 151 PEIIDGIVKSLQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNQGYAIYFSRGLIPYNKS 210

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           GKVN Q+PYLLHLGIQS+D+KFL IYPELQ TPLQLEEDLEQLKVLE+GYKMKVIKVDHE
Sbjct: 211 GKVNPQFPYLLHLGIQSYDAKFLKIYPELQPTPLQLEEDLEQLKVLENGYKMKVIKVDHE 270

[Close]
BLAST of CmoCh04G009720 vs. NCBI nr
Match: gi|743853274|ref|XP_011029470.1| (PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Populus euphratica])

HSP 1 Score: 298.5 bits (763), Expect = 9.5e-78
Identity = 152/189 (80.42%), Postives = 163/189 (86.24%), Query Frame = 1 

Query: 8   VVVATDDAKIAQCCKGFGADVVMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIE 67
           +VVATDD KIA+CC+GFGADVVMTSESCRNGTERCNEALQKL+KKYD+VVNIQGDEPLIE
Sbjct: 91  IVVATDDEKIAECCRGFGADVVMTSESCRNGTERCNEALQKLDKKYDVVVNIQGDEPLIE 150

Query: 68  PEIIDGIVKALQAAPDAVFSTAVTSLKPEDAFDPNRV---------------------KS 127
           PEIIDGIVK+LQAAPDAVFSTAVTSLKPEDAFDPNRV                     KS
Sbjct: 151 PEIIDGIVKSLQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNQGYAIYFSRGLIPYNKS 210

Query: 128 GKVNLQYPYLLHLGIQSFDSKFLSIYPELQSTPLQLEEDLEQLKVLEHGYKMKVIKVDHE 176
           GKVN Q+PYLLHLGIQS+D+KFL IYPELQ TPLQLEEDLEQLKVLE+GYKMKVIKVDHE
Sbjct: 211 GKVNPQFPYLLHLGIQSYDAKFLKIYPELQPTPLQLEEDLEQLKVLENGYKMKVIKVDHE 270

The following BLAST results are available for this feature:
BLAST of CmoCh04G009720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
KDSB_ARATH1.5e-7575.663-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial OS=Arabidopsis th... [more]
KDSB_PARUW7.2e-2541.153-deoxy-manno-octulosonate cytidylyltransferase OS=Protochlamydia amoebophila (s... [more]
KDSB_PARD81.8e-2337.563-deoxy-manno-octulosonate cytidylyltransferase OS=Parabacteroides distasonis (s... [more]
KDSB_CHLMU3.9e-2340.643-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia muridarum (strain M... [more]
KDSB_CHLTR6.7e-2341.183-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia trachomatis (strain... [more]
BLAST of CmoCh04G009720 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2M7_CUCSA3.0e-8697.02Uncharacterized protein OS=Cucumis sativus GN=Csa_3G104930 PE=4 SV=1[more]
B9HZV4_POPTR6.6e-7880.42Cytidylyltransferase family protein OS=Populus trichocarpa GN=POPTR_0011s12080g ... [more]
A0A059BN69_EUCGR8.7e-7880.95Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01118 PE=3 SV=1[more]
A0A067JT27_JATCU7.3e-7779.37Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20982 PE=3 SV=1[more]
M1CCD1_SOLTU7.3e-7780.42Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400025035 PE=3 SV=1[more]
BLAST of CmoCh04G009720 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G53000.18.6e-7775.66 Nucleotide-diphospho-sugar transferases superfamily protein[more]
BLAST of CmoCh04G009720 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201107|gb|KGN56240.1|4.3e-8697.02hypothetical protein Csa_3G104930 [Cucumis sativus][more]
gi|449431840|ref|XP_004133708.1|2.2e-8286.24PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Cucum... [more]
gi|659102683|ref|XP_008452260.1|1.2e-8085.19PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Cucum... [more]
gi|224114948|ref|XP_002316900.1|9.5e-7880.42cytidylyltransferase family protein [Populus trichocarpa][more]
gi|743853274|ref|XP_011029470.1|9.5e-7880.42PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Popul... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003329Cytidylyl_trans
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0033468 CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
biological_process GO:0009103 lipopolysaccharide biosynthetic process
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0009555 pollen development
biological_process GO:0009860 pollen tube growth
cellular_component GO:0031307 integral component of mitochondrial outer membrane
molecular_function GO:0008690 3-deoxy-manno-octulosonate cytidylyltransferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G009720.1CmoCh04G009720.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003329Acylneuraminate cytidylyltransferasePFAMPF02348CTP_transf_3coord: 8..105
score: 5.4
NoneNo IPR availablePANTHERPTHR21485CMP-N-ACETYLNEURAMINIC ACID SYNTHASEcoord: 8..175
score: 6.2E
NoneNo IPR availablePANTHERPTHR21485:SF19SUBFAMILY NOT NAMEDcoord: 8..175
score: 6.2E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G009720Cucurbita maxima (Rimu)cmacmoB337
CmoCh04G009720Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G009720Wild cucumber (PI 183967)cmocpiB703
CmoCh04G009720Cucumber (Chinese Long) v2cmocuB693
CmoCh04G009720Melon (DHL92) v3.5.1cmomeB680
CmoCh04G009720Watermelon (Charleston Gray)cmowcgB615
CmoCh04G009720Watermelon (97103) v1cmowmB674
CmoCh04G009720Cucurbita pepo (Zucchini)cmocpeB667
CmoCh04G009720Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G009720Bottle gourd (USVL1VR-Ls)cmolsiB684
CmoCh04G009720Cucumber (Gy14) v2cgybcmoB393
CmoCh04G009720Melon (DHL92) v3.6.1cmomedB775
CmoCh04G009720Silver-seed gourdcarcmoB0645
CmoCh04G009720Silver-seed gourdcarcmoB0923
CmoCh04G009720Cucumber (Chinese Long) v3cmocucB0822
CmoCh04G009720Watermelon (97103) v2cmowmbB689
CmoCh04G009720Wax gourdcmowgoB0814
CmoCh04G009720Cucurbita moschata (Rifu)cmocmoB285
CmoCh04G009720Cucumber (Gy14) v1cgycmoB0118