CmoCh04G009140 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G009140
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRNA binding protein, putative
LocationCmo_Chr04 : 4595091 .. 4597494 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCGTGTAAATTTTGGGTAATTTGAAGAATGCAATGCTCCTGCATTTCCTTGCCCTCAAATTTGAAACTCGGACCTTCCATCTCCAAATTCAAGCTATCATCAATTCCTAAAGTGGAGGCCATCGATCTTGCTGCAAGAATTTCACTTCCTTCTCATGTGAAAGCCATCACCAGCACCTCCAACCCCTTCGTCAAGCATTGCGTTAAACTCCGCTTCACTTCCTCTTATCGCCACTTCCATGGCTCCGTCCTCGTCGTCGGCGCTACCCCAATTAGGTCGCCTCTTAACGCTTTACTTTCTACGTCTGTCCATAGTTTTGTTCTTCAATTAAAAAAATCAAATTCGTCTATGCAGGGTTTTGCCTTTTCAATTCTTTTTGTTGATACATTTCATCAAAAAGGAAACTCTAAATCCTTGAATGTTTTTGCACATTTGTCGTATGGGTTAACCGATTCCCTTCCTTCGTTTATTGTTTTTCCGAAGTAAAGATGAAAGTTGTTCTGTGAGTTTCTCCCGAAATGTCAGTTTGATACGAGTAGTTTTATAATTGGCCCATTTTAGTTTCTGAAGAATTAAGTTCTTGGAATCAGGTCTAATGTAATAGCAAGCATGTGACTGAATGTTTTTGAAGCACCCTTAAGCTTTGTTCAGAGTTTTATTTGCTTGTGACTGTTCTCTGATTCAACTATAAAGGATAAATTGTTGGAGTTGTATAGAATAAGTGCTTTCCAGTCATTTGAATTCAATCCTTATTAATGTTTACCCATGAGAAATTTGCTAGCTCCCCCCACCCCCCGGATCTTGGGAATTCTACTTCTGTCTGTATTAGTTCATTTTTCTCAAGCGGTCATTCTTTGAGGTCAATATTTTGCTCGACTTCACAAGGTTTGTATGCACATACATCTAATCTTAGTGTTTTACAGAGAAATATGCAAGTTTCAAGAGTCTCTGCGTGGGATAAGTTGTACATTGGAGTGCCTACTTCTGCTAGATGAAGTTGAGATTCCTGAAGAACTTGTCGATGTCTCTGTTCGTGTCGTGCGGGTGAGCCCAACTGTGATGAAAAAGCTTTCTGGAATGCAATCAACAGAATCAATTGATGCAATTGCCCTCATGAGAATACCTGACAGTTTTTATAGTTTAGATGGCAATTTAAAACAAGCACATTGTAAAAGATGGTTTCCATCTCCACATCGAATACTAGTCCTTGAGGGAATCCAGGTAATTATTTCATCTGGAATCGACTCAAGTCCTGTAATTTGGTGCATCTAGTTGTCCTGTCTCTAAGTTGTTTCAAAATAATTATCATTTCCTGCATTTCATTTTATAGTTACTGCTGAGATAACTTGCTACATTGTGTTAAGCTATCTCTCAAATGCCACTTCTGGTATTTACCTGTGCACATTGACATGGCAATAGTTTCTCTGTAGCTATGGTCTTCCTAATCTATCTTTAAGGCTTTGAAAAGAACTTTTAATGCTTAACATTTGATGTTATAAAGTATTATAGATTATTTCATTGATTTAGTACCGATATGTGAACATGACATTTAAAGGTTCATCTTTGCTTATTGCAGGACCCGGGCAATCTTGGTACATTAATCAGGTCTGCTTTGGCCTTCAAATGGGTAAGGTTATTATTGGTTTGAATAATCCTTCTTTGAACCCAATTTTCAATGAATGCTGATGGACATACTCACCTTCATGGTTCAAAATTGCCTGAAGGATTATACATGACATACCATGTCTAAGACTGCAATTTTCTGAAGTATGACGAAGCATTTGGGTATATCAAATAAGTTTTCTGATACATATTTGGGTATGCCAAACAGAACGGTGTTTTTCTGCTTCCTGGGTGTTGTGATCCATTCAACGAGAAGGCACTCCGAGCCTCACGAGGAGCATCTTTTCAGCTTCCAATAGTGTCTGGCACTTGGAATCATCTTGAGGATCTAAAAACCGAATTCCAAATGAAAATGTTGGCTGGACATCCCGAAAGTAATGAACTGAAGCCTGTATCGGTCCTTTCGCAACAGTTTGCGAATTCTTCGAAAGATATCCCATTGTGCTTGGTTTTGGGGAGTGAAGGGAGTGGTCTATCTGAGAAATGTTGGCAGGTTTGTGAGCTTTTGAGCATTCCAATGGCGGGTGGTTTCGAGTCCCTCAACGTCTCAGTTGCAGGAGGAATTTTCTTGTACATGCTGCAGGCTGTAAACGATAGACATACTTGATGTTTTCAAGATCAGACTTCTTCACAAATCATTTTGAACTATTTACAAAACATAGTACTCGTGAAACTCCACAGAACTAAAGGAAAAGGAAACGAAAGTCGAGAAATGATTACCGCAACTTGAATTCAAGTTTAATTAAACTAATATGACTTTGACTTTAATCTGAACATTCT

mRNA sequence

CTCGTGTAAATTTTGGGTAATTTGAAGAATGCAATGCTCCTGCATTTCCTTGCCCTCAAATTTGAAACTCGGACCTTCCATCTCCAAATTCAAGCTATCATCAATTCCTAAAGTGGAGGCCATCGATCTTGCTGCAAGAATTTCACTTCCTTCTCATGTGAAAGCCATCACCAGCACCTCCAACCCCTTCGTCAAGCATTGCGTTAAACTCCGCTTCACTTCCTCTTATCGCCACTTCCATGGCTCCGTCCTCGTCGTCGGCGCTACCCCAATTAGAGAAATATGCAAGTTTCAAGAGTCTCTGCGTGGGATAAGTTGTACATTGGAGTGCCTACTTCTGCTAGATGAAGTTGAGATTCCTGAAGAACTTGTCGATGTCTCTGTTCGTGTCGTGCGGGTGAGCCCAACTGTGATGAAAAAGCTTTCTGGAATGCAATCAACAGAATCAATTGATGCAATTGCCCTCATGAGAATACCTGACAGTTTTTATAGTTTAGATGGCAATTTAAAACAAGCACATTGTAAAAGATGGTTTCCATCTCCACATCGAATACTAGTCCTTGAGGGAATCCAGGACCCGGGCAATCTTGGTACATTAATCAGGTCTGCTTTGGCCTTCAAATGGAACGGTGTTTTTCTGCTTCCTGGGTGTTGTGATCCATTCAACGAGAAGGCACTCCGAGCCTCACGAGGAGCATCTTTTCAGCTTCCAATAGTGTCTGGCACTTGGAATCATCTTGAGGATCTAAAAACCGAATTCCAAATGAAAATGTTGGCTGGACATCCCGAAAGTAATGAACTGAAGCCTGTATCGGTCCTTTCGCAACAGTTTGCGAATTCTTCGAAAGATATCCCATTGTGCTTGGTTTTGGGGAGTGAAGGGAGTGGTCTATCTGAGAAATGTTGGCAGGTTTGTGAGCTTTTGAGCATTCCAATGGCGGGTGGTTTCGAGTCCCTCAACGTCTCAGTTGCAGGAGGAATTTTCTTGTACATGCTGCAGGCTGTAAACGATAGACATACTTGATGTTTTCAAGATCAGACTTCTTCACAAATCATTTTGAACTATTTACAAAACATAGTACTCGTGAAACTCCACAGAACTAAAGGAAAAGGAAACGAAAGTCGAGAAATGATTACCGCAACTTGAATTCAAGTTTAATTAAACTAATATGACTTTGACTTTAATCTGAACATTCT

Coding sequence (CDS)

ATGCAATGCTCCTGCATTTCCTTGCCCTCAAATTTGAAACTCGGACCTTCCATCTCCAAATTCAAGCTATCATCAATTCCTAAAGTGGAGGCCATCGATCTTGCTGCAAGAATTTCACTTCCTTCTCATGTGAAAGCCATCACCAGCACCTCCAACCCCTTCGTCAAGCATTGCGTTAAACTCCGCTTCACTTCCTCTTATCGCCACTTCCATGGCTCCGTCCTCGTCGTCGGCGCTACCCCAATTAGAGAAATATGCAAGTTTCAAGAGTCTCTGCGTGGGATAAGTTGTACATTGGAGTGCCTACTTCTGCTAGATGAAGTTGAGATTCCTGAAGAACTTGTCGATGTCTCTGTTCGTGTCGTGCGGGTGAGCCCAACTGTGATGAAAAAGCTTTCTGGAATGCAATCAACAGAATCAATTGATGCAATTGCCCTCATGAGAATACCTGACAGTTTTTATAGTTTAGATGGCAATTTAAAACAAGCACATTGTAAAAGATGGTTTCCATCTCCACATCGAATACTAGTCCTTGAGGGAATCCAGGACCCGGGCAATCTTGGTACATTAATCAGGTCTGCTTTGGCCTTCAAATGGAACGGTGTTTTTCTGCTTCCTGGGTGTTGTGATCCATTCAACGAGAAGGCACTCCGAGCCTCACGAGGAGCATCTTTTCAGCTTCCAATAGTGTCTGGCACTTGGAATCATCTTGAGGATCTAAAAACCGAATTCCAAATGAAAATGTTGGCTGGACATCCCGAAAGTAATGAACTGAAGCCTGTATCGGTCCTTTCGCAACAGTTTGCGAATTCTTCGAAAGATATCCCATTGTGCTTGGTTTTGGGGAGTGAAGGGAGTGGTCTATCTGAGAAATGTTGGCAGGTTTGTGAGCTTTTGAGCATTCCAATGGCGGGTGGTTTCGAGTCCCTCAACGTCTCAGTTGCAGGAGGAATTTTCTTGTACATGCTGCAGGCTGTAAACGATAGACATACTTGA
Homology
[Close]
BLAST of CmoCh04G009140 vs. Swiss-Prot
Match: Y1673_SYNY3 (Uncharacterized tRNA/rRNA methyltransferase slr1673 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1673 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 8.0e-20
Identity = 92/291 (31.62%), Postives = 134/291 (46.05%), Query Frame = 1 

Query: 40  LPSHVKAITSTSNPFVKHCVKLRFTSSYRHFHGSVLVVGATPIREICKFQESLRGISCTL 99
           L S + +ITST NP VK   +L  T   R   G +L+ G T + E+   Q    G     
Sbjct: 4   LTSDIASITSTQNPLVKQLRQLHQTKG-RKQQGQLLLEG-THLLEVALAQ----GKGFNH 63

Query: 100 ECLLLLDEVEIP---EELVDVSVRVVRVSPTVMKKLSGMQSTESIDAIALMRIPDSFYSL 159
            C   + + + P   + L+  SV    VS  V+ K   M ST + D +      D F+  
Sbjct: 64  GCFTAMWQEKNPVLADRLMAQSVHSYLVSGEVLAK---MASTVNPDGVVATLTMDQFWRS 123

Query: 160 DGNLKQAHCKRWFPSPHRI--LVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNE 219
                        P PH    LVLE +QDPGNLGT++R+A A    G++L   C DP + 
Sbjct: 124 -------------PPPHARLGLVLERLQDPGNLGTILRTAAATGVEGIWLTADCVDPTSP 183

Query: 220 KALRASRGASFQLPIVSGTWNHLEDLKTEFQ---MKMLAGHPESNELKPVSVLSQQFANS 279
           K LR+S G+S  LP        L  L  +F    ++++A  P++         +Q     
Sbjct: 184 KVLRSSAGSSLLLP--QQQLQSLPPLLEKFHTQGLQLIATVPQA---------TQTLWEI 243

Query: 280 SKDIPLCLVLGSEGSGLSEKCWQV-CELLSIPMAGGFESLNVSVAGGIFLY 322
               P  ++ GSEG GLS    ++    ++IP A   ESLNV++A G+ LY
Sbjct: 244 DFQRPTIVIFGSEGQGLSAPVLELTTHQVAIPQAPQVESLNVAIAVGVMLY 261

[Close]
BLAST of CmoCh04G009140 vs. Swiss-Prot
Match: YSGA_BACSU (Uncharacterized tRNA/rRNA methyltransferase YsgA OS=Bacillus subtilis (strain 168) GN=ysgA PE=3 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 9.8e-18
Identity = 77/283 (27.21%), Postives = 134/283 (47.35%), Query Frame = 1 

Query: 44  VKAITSTSNPFVKHCVKLRFTSSYRHFHGSVLVVGATPIREICKFQESLRGISCTLECLL 103
           +K I S  N  VK   KL  T   R    + L+ G   + E  K    ++ I       L
Sbjct: 1   MKQIESAKNQKVKDWKKLH-TKKERTKTNTFLIEGEHLVEEALKSPGIVKEI-------L 60

Query: 104 LLDEVEIPEELVDVSVRVVRVSPTVMKKLSGMQSTESIDAIALMRIPDSFYSLDGNLKQA 163
           + DE  IP +L +  ++   +S      ++  ++ + I A+  M                
Sbjct: 61  VKDETRIPSDL-ETGIQCYMLSEDAFSAVTETETPQQIAAVCHMP--------------- 120

Query: 164 HCKRWFPSPHRILVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGA 223
             +    +  ++L+++ +QDPGNLGT+IR+A A   + V L  G  D FN K LR+++G+
Sbjct: 121 --EEKLATARKVLLIDAVQDPGNLGTMIRTADAAGLDAVVLGDGTADAFNGKTLRSAQGS 180

Query: 224 SFQLPIVSGTW-NHLEDLKTEFQMKMLAGHPESNELKPVSVLSQQFANSSKDIPLCLVLG 283
            F +P+V     +++++LK E  +K+     ++         S+ FA         L++G
Sbjct: 181 HFHIPVVRRNLPSYVDELKAE-GVKVYGTALQNGAPYQEIPQSESFA---------LIVG 240

Query: 284 SEGSGLSEKCWQVCEL-LSIPMAGGFESLNVSVAGGIFLYMLQ 325
           +EG+G+     +  +L L +P+ G  ESLNV+VA  I +Y L+
Sbjct: 241 NEGAGVDAALLEKTDLNLYVPLYGQAESLNVAVAAAILVYHLR 247

[Close]
BLAST of CmoCh04G009140 vs. Swiss-Prot
Match: MRM3_DROME (rRNA methyltransferase 3, mitochondrial OS=Drosophila melanogaster GN=CG14100 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 5.0e-14
Identity = 69/261 (26.44%), Postives = 122/261 (46.74%), Query Frame = 1 

Query: 74  VLVVGATPIREICKFQESLRGISCTLECLLLLDEVEIPEELVDVSVRVVRVSPTVMKKLS 133
           ++V G   I+E  +    +  +  + +  L L + E+    V+   ++ +V    +K  S
Sbjct: 140 IIVEGRRLIQEALQCGLKMEVLLFSQKDQLALVKEEVGVAQVETGTKIYKVPQHDLKTWS 199

Query: 134 GMQSTESIDAIALMRIPDSFYSLDGNLKQAHCKRWFPSPHRILVLEGIQDPGNLGTLIRS 193
            + +   + AI   R  D    L+ NL +       P P  + V + I++P NLG++IR+
Sbjct: 200 SLVTPPGLMAI-FDRPSDK--GLEKNLAEQQRLGSQPFPITV-VCDNIREPNNLGSIIRT 259

Query: 194 ALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSG-TWNHLE-DLKTEFQMKMLAG 253
             A   + V +  GCCDP+  KALR   G  F++PI    TW+ L   +  E        
Sbjct: 260 CAALPCSQVVVTHGCCDPWESKALRGGCGGQFRVPIRDDVTWDELALTIPPEAADDCHVF 319

Query: 254 HPESNELKPVSVLSQQFAN-SSKDIPLCLVLGSEGSGLSEKCWQVCELLS-------IPM 313
             E+N+ K  +  +  +A+         L++G E  G+SE+ ++   L+        IP+
Sbjct: 320 IAETNQRKRENNQTIDYADIKGLGAHNLLIIGGESHGVSEEAYRFLNLVGGKGKCIYIPL 379

Query: 314 AGGFESLNVSVAGGIFLYMLQ 325
           A G +SLNV+ A  + L+ L+
Sbjct: 380 AAGIDSLNVASALTLLLFELR 396

[Close]
BLAST of CmoCh04G009140 vs. Swiss-Prot
Match: Y324_MYCLB (Uncharacterized tRNA/rRNA methyltransferase MLBr00324 OS=Mycobacterium leprae (strain Br4923) GN=MLBr00324 PE=3 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 1.1e-13
Identity = 76/256 (29.69%), Postives = 117/256 (45.70%), Query Frame = 1 

Query: 76  VVGATPIREICKFQESLRGISCTLECLLLLDEVE--IPEELV---DVSVRVVRVSPTVMK 135
           V+G  P+ E  +      G+  T   + L  EV+  + E ++   DV V ++ V  T + 
Sbjct: 70  VLGRNPVLECLR-----AGVPATALYVALGTEVDKRLTESVMRAADVGVAILEVPRTYLD 129

Query: 136 KLSGMQSTESIDAIALMRIPDSFYSLDGNLKQAHCKRWFPSPHRILV-LEGIQDPGNLGT 195
           +++     + I     +++P   Y    +L  A       SP  +LV L+ I DP NLG 
Sbjct: 130 RITNNHLHQGI----ALQVPPYHYVHSDDLLAAATD----SPPALLVALDNISDPRNLGA 189

Query: 196 LIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEDLKTEFQMKML 255
           ++RS  AF  +G+ +           A R S GA+ ++P+   T N    LK        
Sbjct: 190 IVRSVAAFSGHGILIPQRRSASVTAVAWRTSAGAAARIPVARAT-NLTRALKV------- 249

Query: 256 AGHPESNELKPVSVLSQQFANSSKDI----PLCLVLGSEGSGLSEKCWQVC-ELLSIPMA 315
                +++   V  L      +  D+    PL +V+GSEG GLS      C E++SIPMA
Sbjct: 250 ----WADQGLRVIGLDHDGDTALDDLDGTDPLAVVVGSEGKGLSRLVRHSCDEVVSIPMA 300

Query: 316 GGFESLNVSVAGGIFL 321
           G  ESLN SVA G+ L
Sbjct: 310 GQVESLNASVAVGVVL 300

[Close]
BLAST of CmoCh04G009140 vs. Swiss-Prot
Match: Y324_MYCLE (Uncharacterized tRNA/rRNA methyltransferase ML0324 OS=Mycobacterium leprae (strain TN) GN=ML0324 PE=3 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 1.1e-13
Identity = 76/256 (29.69%), Postives = 117/256 (45.70%), Query Frame = 1 

Query: 76  VVGATPIREICKFQESLRGISCTLECLLLLDEVE--IPEELV---DVSVRVVRVSPTVMK 135
           V+G  P+ E  +      G+  T   + L  EV+  + E ++   DV V ++ V  T + 
Sbjct: 70  VLGRNPVLECLR-----AGVPATALYVALGTEVDKRLTESVMRAADVGVAILEVPRTYLD 129

Query: 136 KLSGMQSTESIDAIALMRIPDSFYSLDGNLKQAHCKRWFPSPHRILV-LEGIQDPGNLGT 195
           +++     + I     +++P   Y    +L  A       SP  +LV L+ I DP NLG 
Sbjct: 130 RITNNHLHQGI----ALQVPPYHYVHSDDLLAAATD----SPPALLVALDNISDPRNLGA 189

Query: 196 LIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEDLKTEFQMKML 255
           ++RS  AF  +G+ +           A R S GA+ ++P+   T N    LK        
Sbjct: 190 IVRSVAAFSGHGILIPQRRSASVTAVAWRTSAGAAARIPVARAT-NLTRALKV------- 249

Query: 256 AGHPESNELKPVSVLSQQFANSSKDI----PLCLVLGSEGSGLSEKCWQVC-ELLSIPMA 315
                +++   V  L      +  D+    PL +V+GSEG GLS      C E++SIPMA
Sbjct: 250 ----WADQGLRVIGLDHDGDTALDDLDGTDPLAVVVGSEGKGLSRLVRHSCDEVVSIPMA 300

Query: 316 GGFESLNVSVAGGIFL 321
           G  ESLN SVA G+ L
Sbjct: 310 GQVESLNASVAVGVVL 300

[Close]
BLAST of CmoCh04G009140 vs. TrEMBL
Match: F6I723_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0218g00070 PE=3 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 8.9e-119
Identity = 224/330 (67.88%), Postives = 260/330 (78.79%), Query Frame = 1 

Query: 1    MQCSCISLPSNLKLGPSISKFKLSSIPKVEAIDLAARISLPSHVKAITSTSNPFVKHCVK 60
            MQCS     S++   P    F  SS    +       + LPSHVK+ITS SNPFVKHC K
Sbjct: 1043 MQCSNTCWASSVH--PPGRFFTQSSHHNEDTSCPVVTLPLPSHVKSITSPSNPFVKHCFK 1102

Query: 61   LRFTSSYRHFHGSVLVVGATPIREICKFQESLRGISCTLECLLLLDEVEIPEELVDVSVR 120
            LR +SSYR+ HGS LVVG TPIREI KFQ+S +  +  ++CLL+LD+ EIPE L D SVR
Sbjct: 1103 LRHSSSYRYSHGSALVVGTTPIREIYKFQQSTQERTVEMDCLLILDKAEIPEGLDDFSVR 1162

Query: 121  VVRVSPTVMKKLSGMQSTESIDAIALMRIPDSFYSLDGNLKQAHCKRWFPSPHRILVLEG 180
            +VRVS  VMKKLSG+QSTES++AIALMRIP SF+S++ +  +  C+RWF SPHRILVL+ 
Sbjct: 1163 LVRVSSMVMKKLSGLQSTESVEAIALMRIPTSFFSVNDDTYEKDCRRWFQSPHRILVLDR 1222

Query: 181  IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEDL 240
            IQDPGNLGTL+RSA+AF+W GVFLL GCCDPFN KALRASRGASFQLPIVSG+W HLE L
Sbjct: 1223 IQDPGNLGTLLRSAMAFRWGGVFLLSGCCDPFNGKALRASRGASFQLPIVSGSWIHLETL 1282

Query: 241  KTEFQMKMLAGHPESNE-LKPVSVLSQQFANSSKDIPLCLVLGSEGSGLSEKCWQVCELL 300
            K EFQMKM+AGHP+SN+  KPVS LSQ  A+S  D+PLCLVLGSEGSGLSEK WQ+CEL+
Sbjct: 1283 KNEFQMKMIAGHPDSNQKRKPVSPLSQGLADSLADVPLCLVLGSEGSGLSEKSWQLCELV 1342

Query: 301  SIPMAGGFESLNVSVAGGIFLYMLQAVNDR 330
            SIPMAG FESLNVSVAGGIFLYMLQ  N R
Sbjct: 1343 SIPMAGEFESLNVSVAGGIFLYMLQPQNRR 1370

[Close]
BLAST of CmoCh04G009140 vs. TrEMBL
Match: M5VZY4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008148mg PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 4.9e-117
Identity = 218/323 (67.49%), Postives = 258/323 (79.88%), Query Frame = 1 

Query: 8   LPSNLKLGPSISKFKLSSIPKVEAIDLAARISLPSHVKAITSTSNPFVKHCVKLRFTSSY 67
           L S L +GPS    ++ +  +    D   ++ LPSHV +ITSTSNPFVKHC KLR +SSY
Sbjct: 22  LHSELSVGPS----QIHTQRQSNFEDYDVKLPLPSHVNSITSTSNPFVKHCHKLRQSSSY 81

Query: 68  RHFHGSVLVVGATPIREICKFQESLRGISCTLECLLLLDEVEIPEELVDVSVRVVRVSPT 127
           RH HGS LVVGATPIREI +FQ S +  +  ++CLLLL++ E+PE +   SVR+V VS  
Sbjct: 82  RHSHGSALVVGATPIREIYRFQRSSQEKTVIIDCLLLLEKAEVPEWIDGFSVRIVEVSSV 141

Query: 128 VMKKLSGMQSTESIDAIALMRIPDSFYSLDGNLKQAHCKRWFPSPHRILVLEGIQDPGNL 187
           VMKKLSGMQSTESI+AIALMR+P SF  +D   K+ +CK WFPS HR+LVL+G+QDPGNL
Sbjct: 142 VMKKLSGMQSTESIEAIALMRMPTSFSDIDSEEKEVNCKTWFPSLHRVLVLDGVQDPGNL 201

Query: 188 GTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEDLKTEFQMK 247
           GTL+RSA+AF WNG FLLPGCCDPFNEKALRASRGASFQL IVSGTWNHLE LK EFQ+K
Sbjct: 202 GTLLRSAMAFGWNGAFLLPGCCDPFNEKALRASRGASFQLRIVSGTWNHLESLKNEFQIK 261

Query: 248 MLAGHPESNE-LKPVSVLSQQFANSSKDIPLCLVLGSEGSGLSEKCWQVCELLSIPMAGG 307
           MLAGHP ++E LKPVS LSQ+ A+S  D+PL LVLGSEGSGLSEK  ++CEL+SIPMAG 
Sbjct: 262 MLAGHPGTDEKLKPVSHLSQKLADSFADVPLSLVLGSEGSGLSEKSRRLCELVSIPMAGE 321

Query: 308 FESLNVSVAGGIFLYMLQAVNDR 330
           FESLNVSVAGGIFLY+LQ  N +
Sbjct: 322 FESLNVSVAGGIFLYVLQPKNHK 340

[Close]
BLAST of CmoCh04G009140 vs. TrEMBL
Match: A0A067K0R1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18731 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 6.6e-114
Identity = 206/294 (70.07%), Postives = 241/294 (81.97%), Query Frame = 1 

Query: 37  RISLPSHVKAITSTSNPFVKHCVKLRFTSSYRHFHGSVLVVGATPIREICKFQESLRGIS 96
           +  LPSHVK+ITSTSNPFVKHCVKLR +SSYRHFHGS LVVG TPIREI KFQ+SL   +
Sbjct: 61  KFPLPSHVKSITSTSNPFVKHCVKLRHSSSYRHFHGSALVVGTTPIREIHKFQKSLEERT 120

Query: 97  CTLECLLLLDEVEIPEELVDVSVRVVRVSPTVMKKLSGMQSTESIDAIALMRIPDSFYSL 156
              ECL+LLD+ ++PE L   S R +RVS  VMKKLS +QSTESI+AIALM+ P S++ +
Sbjct: 121 VETECLILLDKAKVPEGLDSSSSRTLRVSALVMKKLSQLQSTESIEAIALMKFPTSYFVV 180

Query: 157 DGNLKQAHCKRWFPSPHRILVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKA 216
           D +   A C +WFP+PHRILVLEGIQDPGNLGTLIRSA+AF+W G+F+LPGCCDPFN+KA
Sbjct: 181 DDHENNADCWKWFPTPHRILVLEGIQDPGNLGTLIRSAVAFRWGGIFILPGCCDPFNDKA 240

Query: 217 LRASRGASFQLPIVSGTWNHLEDLKTEFQMKMLAGHPES-NELKPVSVLSQQFANSSKDI 276
           L+ASRGASFQ+PIVSG+W HLE LK EFQMKMLAG P S +ELKPV+ LSQ  A+S  D 
Sbjct: 241 LKASRGASFQVPIVSGSWRHLEALKDEFQMKMLAGQPASDDELKPVAELSQGLADSLADT 300

Query: 277 PLCLVLGSEGSGLSEKCWQVCELLSIPMAGGFESLNVSVAGGIFLYMLQAVNDR 330
           PLCLVLGSEG GLSEK  + C+L+SIPMA  +ESLNV+VAGGIFLYMLQ  N R
Sbjct: 301 PLCLVLGSEGHGLSEKSMRECQLISIPMARNYESLNVAVAGGIFLYMLQPKNQR 354

[Close]
BLAST of CmoCh04G009140 vs. TrEMBL
Match: R0GX55_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10005129mg PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 2.1e-112
Identity = 218/350 (62.29%), Postives = 264/350 (75.43%), Query Frame = 1 

Query: 1   MQCSC------ISLPSNLKLGPSISKFKLSS--IPK------------VEAIDLAA--RI 60
           M C C      +S     +  PS SK + SS   PK            + ++D +   R+
Sbjct: 3   MHCGCAFASQPVSPRILFEFKPSASKLRASSAQFPKTQIRINPSDDILINSLDKSPEIRV 62

Query: 61  SLPSHVKAITSTSNPFVKHCVKLRFTSSYRHFHGSVLVVGATPIREICKFQESLRGISCT 120
           SLPSHV +ITSTSNPFVKHC+KLR +SSYRH HGSVLVVGA PIRE+C FQE+  GI+  
Sbjct: 63  SLPSHVNSITSTSNPFVKHCLKLRQSSSYRHVHGSVLVVGAIPIREVCIFQENKLGIATE 122

Query: 121 LECLLLLDEVEIPEELVDVSVRVVRVSPTVMKKLSGMQSTESIDAIALMRIPDSFYSL-D 180
           +ECLLL +E +IP+ L ++S+R+VRVS  VMKKLSG+QSTES++AIALMRIP+SF  L D
Sbjct: 123 IECLLLHEEAQIPQGLENLSIRIVRVSSLVMKKLSGVQSTESVEAIALMRIPNSFVDLKD 182

Query: 181 GNLKQAHCKRWFPSPHRILVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKAL 240
                  C +WFPS HR+LVL+ IQDPGNLGTLIRSA+AF W+G FLLPGCCDPFN+KAL
Sbjct: 183 DQDIVRGCSKWFPSAHRVLVLDSIQDPGNLGTLIRSAMAFNWDGAFLLPGCCDPFNDKAL 242

Query: 241 RASRGASFQLPIVSGTWNHLEDLKTEFQMKMLAGHPE--SNELKPVSVLSQQFANSSKDI 300
           RASRGASFQLPIVSG WNHL+ L+ EFQMK+ AGHP   + + KPVS LSQ+FA S    
Sbjct: 243 RASRGASFQLPIVSGNWNHLKLLEHEFQMKLFAGHPSTTTQKPKPVSRLSQEFAQSVAGK 302

Query: 301 PLCLVLGSEGSGLSEKCWQVCELLSIPMAGGFESLNVSVAGGIFLYMLQA 326
           PLCL+LGSEG+GLS++  +VCEL+SIPMAG FESLNVSVAGGIFL+MLQ+
Sbjct: 303 PLCLILGSEGNGLSDQSRKVCELVSIPMAGEFESLNVSVAGGIFLFMLQS 352

[Close]
BLAST of CmoCh04G009140 vs. TrEMBL
Match: B9T2B4_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_0410040 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 2.1e-112
Identity = 209/322 (64.91%), Postives = 254/322 (78.88%), Query Frame = 1 

Query: 9   PSNLKLG---PSISKFKLSSIPKVEAIDLAA--RISLPSHVKAITSTSNPFVKHCVKLRF 68
           PS L L    P +S    +   +   ID +A  R  LP+H+K+ITSTSNPF+KHCVKLR 
Sbjct: 14  PSPLNLTNSKPRLSNTSPNQTQRNGDIDNSAEVRFPLPTHIKSITSTSNPFIKHCVKLRQ 73

Query: 69  TSSYRHFHGSVLVVGATPIREICKFQESLRGISCTLECLLLLDEVEIPEELVDVSVRVVR 128
           +S YRH HGS LVVG TPIREICKFQ+SL+  +  +ECL+L D+ ++PE L   S R +R
Sbjct: 74  SSPYRHAHGSALVVGTTPIREICKFQKSLKEETVEMECLILPDKAKVPEGLDSSSTRTLR 133

Query: 129 VSPTVMKKLSGMQSTESIDAIALMRIPDSFYSLDGNLKQAHCKRWFPSPHRILVLEGIQD 188
           VS  VMK+LS +QSTESI+AIALM+ P S++ +  + K A  ++WFPSPHRILVLEGIQD
Sbjct: 134 VSALVMKRLSQLQSTESIEAIALMKFPTSYFVVGDHQKDADFRKWFPSPHRILVLEGIQD 193

Query: 189 PGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEDLKTE 248
           PGNLGTL+RSA+AF+W G+FLLPGCCDPFN+KAL+ASRGASFQ+PIVSG+W+HLE LK E
Sbjct: 194 PGNLGTLVRSAVAFRWGGIFLLPGCCDPFNDKALKASRGASFQVPIVSGSWHHLEALKDE 253

Query: 249 FQMKMLAGHPES-NELKPVSVLSQQFANSSKDIPLCLVLGSEGSGLSEKCWQVCELLSIP 308
           FQMKMLAGHP S +E  PVS LSQ FA+S  DIP+CLVLG+EG GLSEK  Q C+L+SIP
Sbjct: 254 FQMKMLAGHPASDDEQTPVSELSQGFADSLADIPICLVLGNEGQGLSEKSLQECQLVSIP 313

Query: 309 MAGGFESLNVSVAGGIFLYMLQ 325
           MA  +ESLNV+VAGGIFLYMLQ
Sbjct: 314 MARNYESLNVAVAGGIFLYMLQ 335

[Close]
BLAST of CmoCh04G009140 vs. TAIR10
Match: AT4G38020.1 (AT4G38020.1 tRNA/rRNA methyltransferase (SpoU) family protein)

HSP 1 Score: 411.4 bits (1056), Expect = 5.3e-115
Identity = 202/293 (68.94%), Postives = 242/293 (82.59%), Query Frame = 1 

Query: 35  AARISLPSHVKAITSTSNPFVKHCVKLRFTSSYRHFHGSVLVVGATPIREICKFQESLRG 94
           A R+SLPSHV +ITST+NPFVKHC+KLR +SSYRH HGSVLVVG  PIRE+C FQ + +G
Sbjct: 57  ANRVSLPSHVNSITSTTNPFVKHCLKLRQSSSYRHAHGSVLVVGTIPIREVCMFQTNKQG 116

Query: 95  ISCTLECLLLLDEVEIPEELVDVSVRVVRVSPTVMKKLSGMQSTESIDAIALMRIPDSFY 154
           ++  +ECLLL +E +IP+ L  +S+R+VRVS  VMKKLSG+QSTES++AIALMRIP SF 
Sbjct: 117 MTTEIECLLLHEEAKIPQGLESLSIRIVRVSSLVMKKLSGVQSTESVEAIALMRIPSSFT 176

Query: 155 SL-DGNLKQAHCKRWFPSPHRILVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFN 214
            L D       C +WFPS HR+LVL+ IQDPGNLGTL+RSA+AF W+G FLLPGCCDP+N
Sbjct: 177 DLKDDKDIITDCNKWFPSAHRVLVLDSIQDPGNLGTLVRSAMAFNWDGAFLLPGCCDPYN 236

Query: 215 EKALRASRGASFQLPIVSGTWNHLEDLKTEFQMKMLAGHP--ESNELKPVSVLSQQFANS 274
           +KALRASRGASFQLPIVSG WNHL+ L+ EFQMK+LAGHP   + +LKPVS LS +FA S
Sbjct: 237 DKALRASRGASFQLPIVSGNWNHLKLLENEFQMKLLAGHPATTTQKLKPVSKLSVEFAQS 296

Query: 275 SKDIPLCLVLGSEGSGLSEKCWQVCELLSIPMAGGFESLNVSVAGGIFLYMLQ 325
             + PLCL+LGSEG+GLSE+  +VC L+SIPMAG FESLNVSVAGGIFLYMLQ
Sbjct: 297 LAEKPLCLILGSEGNGLSEQARKVCVLVSIPMAGDFESLNVSVAGGIFLYMLQ 349

[Close]
BLAST of CmoCh04G009140 vs. TAIR10
Match: AT2G19870.1 (AT2G19870.1 tRNA/rRNA methyltransferase (SpoU) family protein)

HSP 1 Score: 50.4 bits (119), Expect = 2.4e-06
Identity = 51/173 (29.48%), Postives = 74/173 (42.77%), Query Frame = 1 

Query: 176 LVLEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGA--SFQLPIVSGT 235
           + L+ + DP NLG +IRSA  F   GV +      P +    +AS G+    +L      
Sbjct: 420 VALDEVTDPQNLGAIIRSAYFFGATGVVVCAKNSAPLSAVVSKASAGSLEVMELRYCKNM 479

Query: 236 WNHLEDLKTEFQMKMLAGHPESNELKPVSVLSQQFANSSKDIPLCLVLGSEGSGLSEKCW 295
              LE    E   +++ G      + P +V   +    S   P  LVLG+EG+GL     
Sbjct: 480 MQFLE-ASAENGWRVVGG-----SVSPKAVALNEVLPGS---PTILVLGNEGTGLRPLVE 539

Query: 296 QVCELLSIPMAG-----------------GF------ESLNVSVAGGIFLYML 324
           + C  L + ++G                 GF      ESLNVSVA G+FL+ L
Sbjct: 540 RSCTDL-VRISGNMPNEVAVTESDDAEGEGFRSFLAVESLNVSVAAGLFLHHL 582

[Close]
BLAST of CmoCh04G009140 vs. NCBI nr
Match: gi|778676548|ref|XP_011650605.1| (PREDICTED: rRNA methyltransferase 3, mitochondrial [Cucumis sativus])

HSP 1 Score: 557.0 bits (1434), Expect = 2.2e-155
Identity = 276/325 (84.92%), Postives = 292/325 (89.85%), Query Frame = 1 

Query: 1   MQCSCISLPSNLKLGPSISKFKLSSIPKVEAIDLAARISLPSHVKAITSTSNPFVKHCVK 60
           MQCSC+S  SN KL PS  K KLSSI   EAID   RI LPSHVKAITS SNPFVKHCVK
Sbjct: 1   MQCSCLSWSSNPKLAPSFPKSKLSSINIAEAIDFTGRIPLPSHVKAITSISNPFVKHCVK 60

Query: 61  LRFTSSYRHFHGSVLVVGATPIREICKFQESLRGISCTLECLLLLDEVEIPEELVDVSVR 120
           LRF+SSYRHFHGSV+VVGATPIREICKFQESL G++CTLECLLLLDEVE+PE LV+++VR
Sbjct: 61  LRFSSSYRHFHGSVVVVGATPIREICKFQESLHGVTCTLECLLLLDEVEVPEGLVNLTVR 120

Query: 121 VVRVSPTVMKKLSGMQSTESIDAIALMRIPDSFYSLDGNLKQAHCKRWFPSPHRILVLEG 180
           +VRVS  VMKKLSG+QSTESIDAIALMRIP SF S+DGN K+   KRWFPSPHRILVLEG
Sbjct: 121 IVRVSSAVMKKLSGLQSTESIDAIALMRIPPSFCSVDGNEKEVDFKRWFPSPHRILVLEG 180

Query: 181 IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEDL 240
           IQDPGNLGTLIRSALAFKWNG+FLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLE  
Sbjct: 181 IQDPGNLGTLIRSALAFKWNGIFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEVF 240

Query: 241 KTEFQMKMLAGHPESNELKPVSVLSQQFANSSKDIPLCLVLGSEGSGLSEKCWQVCELLS 300
           K EF+MKMLAGHPESNE KPVSVLSQQF+NS KD PLCLVLG EGSGLSEK WQVCELLS
Sbjct: 241 KKEFEMKMLAGHPESNEPKPVSVLSQQFSNSLKDFPLCLVLGCEGSGLSEKSWQVCELLS 300

Query: 301 IPMAGGFESLNVSVAGGIFLYMLQA 326
           IPMAGGFESLNVSVAGGIFLYMLQA
Sbjct: 301 IPMAGGFESLNVSVAGGIFLYMLQA 325

[Close]
BLAST of CmoCh04G009140 vs. NCBI nr
Match: gi|659098507|ref|XP_008450171.1| (PREDICTED: RNA methyltransferase-like protein 1 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 553.9 bits (1426), Expect = 1.9e-154
Identity = 278/325 (85.54%), Postives = 292/325 (89.85%), Query Frame = 1 

Query: 1   MQCSCISLPSNLKLGPSISKFKLSSIPKVEAIDLAARISLPSHVKAITSTSNPFVKHCVK 60
           MQCSC+S  SN KLGPS  K KLSSI + EAID   RISLPSHVKAI+S SNPFVKHCVK
Sbjct: 1   MQCSCLSWSSNPKLGPSFHKSKLSSINQAEAIDFTGRISLPSHVKAISSISNPFVKHCVK 60

Query: 61  LRFTSSYRHFHGSVLVVGATPIREICKFQESLRGISCTLECLLLLDEVEIPEELVDVSVR 120
           LRF+SSYRHFHGSV+VVGATPIREICKFQESL GI+CTLE LLLLDEVE+PE LV+++VR
Sbjct: 61  LRFSSSYRHFHGSVVVVGATPIREICKFQESLHGITCTLEYLLLLDEVEVPEGLVNLTVR 120

Query: 121 VVRVSPTVMKKLSGMQSTESIDAIALMRIPDSFYSLDGNLKQAHCKRWFPSPHRILVLEG 180
           +VRVS  VMKKLSG+QSTESIDAIALMRIP SF S+DGN K    KRWFPSPHRILVLE 
Sbjct: 121 IVRVSSAVMKKLSGLQSTESIDAIALMRIPPSFCSVDGNEKVVDFKRWFPSPHRILVLER 180

Query: 181 IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEDL 240
           IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLE  
Sbjct: 181 IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEVF 240

Query: 241 KTEFQMKMLAGHPESNELKPVSVLSQQFANSSKDIPLCLVLGSEGSGLSEKCWQVCELLS 300
           K EF+MKMLAGHPESNE KPVSVLSQQFANS KD PLCLVLG EGSGLSEK WQVCELLS
Sbjct: 241 KKEFKMKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQVCELLS 300

Query: 301 IPMAGGFESLNVSVAGGIFLYMLQA 326
           IPMAGGFESLNVSVAGGIFLYMLQA
Sbjct: 301 IPMAGGFESLNVSVAGGIFLYMLQA 325

[Close]
BLAST of CmoCh04G009140 vs. NCBI nr
Match: gi|659098505|ref|XP_008450170.1| (PREDICTED: RNA methyltransferase-like protein 1 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 548.5 bits (1412), Expect = 7.9e-153
Identity = 278/328 (84.76%), Postives = 292/328 (89.02%), Query Frame = 1 

Query: 1   MQCSCISLPSNLKLGPSISKFKLSSIPKVEAIDLAARISLPSHVKAITSTSNPFVKHCVK 60
           MQCSC+S  SN KLGPS  K KLSSI + EAID   RISLPSHVKAI+S SNPFVKHCVK
Sbjct: 1   MQCSCLSWSSNPKLGPSFHKSKLSSINQAEAIDFTGRISLPSHVKAISSISNPFVKHCVK 60

Query: 61  LRFTSSYRHFHGSVLVVGATPI---REICKFQESLRGISCTLECLLLLDEVEIPEELVDV 120
           LRF+SSYRHFHGSV+VVGATPI   REICKFQESL GI+CTLE LLLLDEVE+PE LV++
Sbjct: 61  LRFSSSYRHFHGSVVVVGATPISLYREICKFQESLHGITCTLEYLLLLDEVEVPEGLVNL 120

Query: 121 SVRVVRVSPTVMKKLSGMQSTESIDAIALMRIPDSFYSLDGNLKQAHCKRWFPSPHRILV 180
           +VR+VRVS  VMKKLSG+QSTESIDAIALMRIP SF S+DGN K    KRWFPSPHRILV
Sbjct: 121 TVRIVRVSSAVMKKLSGLQSTESIDAIALMRIPPSFCSVDGNEKVVDFKRWFPSPHRILV 180

Query: 181 LEGIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHL 240
           LE IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHL
Sbjct: 181 LERIQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHL 240

Query: 241 EDLKTEFQMKMLAGHPESNELKPVSVLSQQFANSSKDIPLCLVLGSEGSGLSEKCWQVCE 300
           E  K EF+MKMLAGHPESNE KPVSVLSQQFANS KD PLCLVLG EGSGLSEK WQVCE
Sbjct: 241 EVFKKEFKMKMLAGHPESNEPKPVSVLSQQFANSLKDFPLCLVLGCEGSGLSEKSWQVCE 300

Query: 301 LLSIPMAGGFESLNVSVAGGIFLYMLQA 326
           LLSIPMAGGFESLNVSVAGGIFLYMLQA
Sbjct: 301 LLSIPMAGGFESLNVSVAGGIFLYMLQA 328

[Close]
BLAST of CmoCh04G009140 vs. NCBI nr
Match: gi|296090517|emb|CBI40848.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 434.9 bits (1117), Expect = 1.3e-118
Identity = 224/330 (67.88%), Postives = 260/330 (78.79%), Query Frame = 1 

Query: 1    MQCSCISLPSNLKLGPSISKFKLSSIPKVEAIDLAARISLPSHVKAITSTSNPFVKHCVK 60
            MQCS     S++   P    F  SS    +       + LPSHVK+ITS SNPFVKHC K
Sbjct: 969  MQCSNTCWASSVH--PPGRFFTQSSHHNEDTSCPVVTLPLPSHVKSITSPSNPFVKHCFK 1028

Query: 61   LRFTSSYRHFHGSVLVVGATPIREICKFQESLRGISCTLECLLLLDEVEIPEELVDVSVR 120
            LR +SSYR+ HGS LVVG TPIREI KFQ+S +  +  ++CLL+LD+ EIPE L D SVR
Sbjct: 1029 LRHSSSYRYSHGSALVVGTTPIREIYKFQQSTQERTVEMDCLLILDKAEIPEGLDDFSVR 1088

Query: 121  VVRVSPTVMKKLSGMQSTESIDAIALMRIPDSFYSLDGNLKQAHCKRWFPSPHRILVLEG 180
            +VRVS  VMKKLSG+QSTES++AIALMRIP SF+S++ +  +  C+RWF SPHRILVL+ 
Sbjct: 1089 LVRVSSMVMKKLSGLQSTESVEAIALMRIPTSFFSVNDDTYEKDCRRWFQSPHRILVLDR 1148

Query: 181  IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEDL 240
            IQDPGNLGTL+RSA+AF+W GVFLL GCCDPFN KALRASRGASFQLPIVSG+W HLE L
Sbjct: 1149 IQDPGNLGTLLRSAMAFRWGGVFLLSGCCDPFNGKALRASRGASFQLPIVSGSWIHLETL 1208

Query: 241  KTEFQMKMLAGHPESNE-LKPVSVLSQQFANSSKDIPLCLVLGSEGSGLSEKCWQVCELL 300
            K EFQMKM+AGHP+SN+  KPVS LSQ  A+S  D+PLCLVLGSEGSGLSEK WQ+CEL+
Sbjct: 1209 KNEFQMKMIAGHPDSNQKRKPVSPLSQGLADSLADVPLCLVLGSEGSGLSEKSWQLCELV 1268

Query: 301  SIPMAGGFESLNVSVAGGIFLYMLQAVNDR 330
            SIPMAG FESLNVSVAGGIFLYMLQ  N R
Sbjct: 1269 SIPMAGEFESLNVSVAGGIFLYMLQPQNRR 1296

[Close]
BLAST of CmoCh04G009140 vs. NCBI nr
Match: gi|731440761|ref|XP_010646447.1| (PREDICTED: uncharacterized protein LOC100259536 [Vitis vinifera])

HSP 1 Score: 434.9 bits (1117), Expect = 1.3e-118
Identity = 224/330 (67.88%), Postives = 260/330 (78.79%), Query Frame = 1 

Query: 1   MQCSCISLPSNLKLGPSISKFKLSSIPKVEAIDLAARISLPSHVKAITSTSNPFVKHCVK 60
           MQCS     S++   P    F  SS    +       + LPSHVK+ITS SNPFVKHC K
Sbjct: 124 MQCSNTCWASSVH--PPGRFFTQSSHHNEDTSCPVVTLPLPSHVKSITSPSNPFVKHCFK 183

Query: 61  LRFTSSYRHFHGSVLVVGATPIREICKFQESLRGISCTLECLLLLDEVEIPEELVDVSVR 120
           LR +SSYR+ HGS LVVG TPIREI KFQ+S +  +  ++CLL+LD+ EIPE L D SVR
Sbjct: 184 LRHSSSYRYSHGSALVVGTTPIREIYKFQQSTQERTVEMDCLLILDKAEIPEGLDDFSVR 243

Query: 121 VVRVSPTVMKKLSGMQSTESIDAIALMRIPDSFYSLDGNLKQAHCKRWFPSPHRILVLEG 180
           +VRVS  VMKKLSG+QSTES++AIALMRIP SF+S++ +  +  C+RWF SPHRILVL+ 
Sbjct: 244 LVRVSSMVMKKLSGLQSTESVEAIALMRIPTSFFSVNDDTYEKDCRRWFQSPHRILVLDR 303

Query: 181 IQDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRASRGASFQLPIVSGTWNHLEDL 240
           IQDPGNLGTL+RSA+AF+W GVFLL GCCDPFN KALRASRGASFQLPIVSG+W HLE L
Sbjct: 304 IQDPGNLGTLLRSAMAFRWGGVFLLSGCCDPFNGKALRASRGASFQLPIVSGSWIHLETL 363

Query: 241 KTEFQMKMLAGHPESNE-LKPVSVLSQQFANSSKDIPLCLVLGSEGSGLSEKCWQVCELL 300
           K EFQMKM+AGHP+SN+  KPVS LSQ  A+S  D+PLCLVLGSEGSGLSEK WQ+CEL+
Sbjct: 364 KNEFQMKMIAGHPDSNQKRKPVSPLSQGLADSLADVPLCLVLGSEGSGLSEKSWQLCELV 423

Query: 301 SIPMAGGFESLNVSVAGGIFLYMLQAVNDR 330
           SIPMAG FESLNVSVAGGIFLYMLQ  N R
Sbjct: 424 SIPMAGEFESLNVSVAGGIFLYMLQPQNRR 451

The following BLAST results are available for this feature:
BLAST of CmoCh04G009140 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y1673_SYNY38.0e-2031.62Uncharacterized tRNA/rRNA methyltransferase slr1673 OS=Synechocystis sp. (strain... [more]
YSGA_BACSU9.8e-1827.21Uncharacterized tRNA/rRNA methyltransferase YsgA OS=Bacillus subtilis (strain 16... [more]
MRM3_DROME5.0e-1426.44rRNA methyltransferase 3, mitochondrial OS=Drosophila melanogaster GN=CG14100 PE... [more]
Y324_MYCLB1.1e-1329.69Uncharacterized tRNA/rRNA methyltransferase MLBr00324 OS=Mycobacterium leprae (s... [more]
Y324_MYCLE1.1e-1329.69Uncharacterized tRNA/rRNA methyltransferase ML0324 OS=Mycobacterium leprae (stra... [more]
BLAST of CmoCh04G009140 vs. TrEMBL
Match NameE-valueIdentityDescription
F6I723_VITVI8.9e-11967.88Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0218g00070 PE=3 SV=... [more]
M5VZY4_PRUPE4.9e-11767.49Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008148mg PE=4 SV=1[more]
A0A067K0R1_JATCU6.6e-11470.07Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18731 PE=4 SV=1[more]
R0GX55_9BRAS2.1e-11262.29Uncharacterized protein OS=Capsella rubella GN=CARUB_v10005129mg PE=4 SV=1[more]
B9T2B4_RICCO2.1e-11264.91RNA binding protein, putative OS=Ricinus communis GN=RCOM_0410040 PE=4 SV=1[more]
BLAST of CmoCh04G009140 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G38020.15.3e-11568.94 tRNA/rRNA methyltransferase (SpoU) family protein[more]
AT2G19870.12.4e-0629.48 tRNA/rRNA methyltransferase (SpoU) family protein[more]
BLAST of CmoCh04G009140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778676548|ref|XP_011650605.1|2.2e-15584.92PREDICTED: rRNA methyltransferase 3, mitochondrial [Cucumis sativus][more]
gi|659098507|ref|XP_008450171.1|1.9e-15485.54PREDICTED: RNA methyltransferase-like protein 1 homolog isoform X2 [Cucumis melo... [more]
gi|659098505|ref|XP_008450170.1|7.9e-15384.76PREDICTED: RNA methyltransferase-like protein 1 homolog isoform X1 [Cucumis melo... [more]
gi|296090517|emb|CBI40848.3|1.3e-11867.88unnamed protein product [Vitis vinifera][more]
gi|731440761|ref|XP_010646447.1|1.3e-11867.88PREDICTED: uncharacterized protein LOC100259536 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001537SpoU_MeTrfase
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0008173RNA methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001510 RNA methylation
biological_process GO:0006396 RNA processing
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
molecular_function GO:0008173 RNA methyltransferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G009140.1CmoCh04G009140.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001537tRNA/rRNA methyltransferase, SpoU typePFAMPF00588SpoU_methylasecoord: 175..321
score: 7.2
NoneNo IPR availablePANTHERPTHR12029RNA METHYLTRANSFERASEcoord: 42..324
score: 7.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G009140Cucsa.260180Cucumber (Gy14) v1cgycmoB0715
CmoCh04G009140CmaCh04G008550Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G009140Csa3G115080Cucumber (Chinese Long) v2cmocuB693
CmoCh04G009140MELO3C014951Melon (DHL92) v3.5.1cmomeB680
CmoCh04G009140ClCG10G008240Watermelon (Charleston Gray)cmowcgB613
CmoCh04G009140CSPI03G06910Wild cucumber (PI 183967)cmocpiB703
CmoCh04G009140Lsi05G007970Bottle gourd (USVL1VR-Ls)cmolsiB685
CmoCh04G009140MELO3C014951.2Melon (DHL92) v3.6.1cmomedB778
CmoCh04G009140CsaV3_3G006990Cucumber (Chinese Long) v3cmocucB0822
CmoCh04G009140Cla97C10G191720Watermelon (97103) v2cmowmbB686
CmoCh04G009140Bhi11G000754Wax gourdcmowgoB0811
CmoCh04G009140CsGy3G007020Cucumber (Gy14) v2cgybcmoB393
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G009140Melon (DHL92) v3.5.1cmomeB702
CmoCh04G009140Watermelon (Charleston Gray)cmowcgB641
CmoCh04G009140Cucurbita pepo (Zucchini)cmocpeB655
CmoCh04G009140Cucurbita pepo (Zucchini)cmocpeB667
CmoCh04G009140Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G009140Bottle gourd (USVL1VR-Ls)cmolsiB628
CmoCh04G009140Cucumber (Gy14) v2cgybcmoB824
CmoCh04G009140Melon (DHL92) v3.6.1cmomedB801
CmoCh04G009140Silver-seed gourdcarcmoB1259
CmoCh04G009140Silver-seed gourdcarcmoB1371
CmoCh04G009140Watermelon (97103) v2cmowmbB689
CmoCh04G009140Cucurbita moschata (Rifu)cmocmoB285
CmoCh04G009140Cucurbita moschata (Rifu)cmocmoB451
CmoCh04G009140Cucumber (Gy14) v1cgycmoB0229
CmoCh04G009140Cucurbita maxima (Rimu)cmacmoB337