CmoCh04G008890 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G008890
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	(Phosphoenolpyruvate carboxykinase) (4.1.1.49)
Location	Cmo_Chr04 : 4482965 .. 4483793 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCAAACGGAAACGCAGAGTTCAGTTTTGCAAACAATGGATCGGCGAGAAACGGACTGTCGAGAATTCAGACTGAGAAGAAACAGAATGGGATCTGTCATGATGACAGTGCTCCACCTGTGAAGGCGAAGACCATTGATGAGTTACACTCGTTGCAGAGGAAGAAATCGGCCCCTACCACTCCCATTAAGGGCACTGAAGGAGCTTTCGCTGCCATTTCTGAAGAGGAGCGTCAGAAGCAGCAGCTTCAGTCCATCAGGTTCAATTACTTTCTCGTACTCCACTGACACATCGCTCGCAACGACCAATCATACCTCGCCTTCTATTTTTAAAGCTTCTCCGAAAACGACGCTTAATTAATACCTATTTTGGATTTGATAATTGTTTATGCGTATTAGTGTTGGGTATATAAGATTCGTTTCTTAATGCTGAACCGATCGAGGACGGTTTAATTTGAACAGTGCTTCATTGGCATCATTGACGAGAGAAACCGGGCCAAAATTGGTGAAAGGAGATCCGGCGAGGAAATCAGAAACTCCCAAAGCTCATGCGGTGCACCACCACTACCACGCGCCGACAATTAGCGTTAGCGACAGCTCCTTGAAGTTCACCCATATCCTTTACAATCTCTCCCCTGCAGGTTCGTTCTCTTTTTGTCCGTTTCTCATTCGCTTTCAAATTCCATTCTATTTCAGGGCAGATCAGATGGTGTCGTCTTCTTCAAGGGCCATCTACTTATCTGCCTGCCCATGTTTTATGGGCCCAGATTGGAATCTAGAATTTGTGCCTAAGACGTTCTTTTTGCCCCCAATTTTTTTTGGTTGA

mRNA sequence

ATGGCCGCAAACGGAAACGCAGAGTTCAGTTTTGCAAACAATGGATCGGCGAGAAACGGACTGTCGAGAATTCAGACTGAGAAGAAACAGAATGGGATCTGTCATGATGACAGTGCTCCACCTGTGAAGGCGAAGACCATTGATGAGTTACACTCGTTGCAGAGGAAGAAATCGGCCCCTACCACTCCCATTAAGGGCACTGAAGGAGCTTTCGCTGCCATTTCTGAAGAGGAGCGTCAGAAGCAGCAGCTTCAGTCCATCAGTGCTTCATTGGCATCATTGACGAGAGAAACCGGGCCAAAATTGGTGAAAGGAGATCCGGCGAGGAAATCAGAAACTCCCAAAGCTCATGCGGTGCACCACCACTACCACGCGCCGACAATTAGCGTTAGCGACAGCTCCTTGAAGTTCACCCATATCCTTTACAATCTCTCCCCTGCAGGTTCGTTCTCTTTTTGTCCGTTTCTCATTCGCTTTCAAATTCCATTCTATTTCAGGGCAGATCAGATGGTGTCGTCTTCTTCAAGGGCCATCTACTTATCTGCCTGCCCATGTTTTATGGGCCCAGATTGGAATCTAGAATTTGTGCCTAAGACGTTCTTTTTGCCCCCAATTTTTTTTGGTTGA

Coding sequence (CDS)

ATGGCCGCAAACGGAAACGCAGAGTTCAGTTTTGCAAACAATGGATCGGCGAGAAACGGACTGTCGAGAATTCAGACTGAGAAGAAACAGAATGGGATCTGTCATGATGACAGTGCTCCACCTGTGAAGGCGAAGACCATTGATGAGTTACACTCGTTGCAGAGGAAGAAATCGGCCCCTACCACTCCCATTAAGGGCACTGAAGGAGCTTTCGCTGCCATTTCTGAAGAGGAGCGTCAGAAGCAGCAGCTTCAGTCCATCAGTGCTTCATTGGCATCATTGACGAGAGAAACCGGGCCAAAATTGGTGAAAGGAGATCCGGCGAGGAAATCAGAAACTCCCAAAGCTCATGCGGTGCACCACCACTACCACGCGCCGACAATTAGCGTTAGCGACAGCTCCTTGAAGTTCACCCATATCCTTTACAATCTCTCCCCTGCAGGTTCGTTCTCTTTTTGTCCGTTTCTCATTCGCTTTCAAATTCCATTCTATTTCAGGGCAGATCAGATGGTGTCGTCTTCTTCAAGGGCCATCTACTTATCTGCCTGCCCATGTTTTATGGGCCCAGATTGGAATCTAGAATTTGTGCCTAAGACGTTCTTTTTGCCCCCAATTTTTTTTGGTTGA

Homology

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BLAST of CmoCh04G008890 vs. Swiss-Prot
Match: PCKA_CUCSA (Phosphoenolpyruvate carboxykinase [ATP] OS=Cucumis sativus GN=PCK PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.2e-39
Identity = 88/150 (58.67%), Postives = 111/150 (74.00%), Query Frame = 1


Query: 6   NAEFSFANNGSA---RNGLSRIQTEKK----QNGICHDDSAPPVKAKTIDELHSLQRKKS 65
           N EFSF ++G A   R GL +I TEK     +  ICHDDS  P++A+T++ LHSLQ+K+S
Sbjct: 8   NGEFSFVSDGGAETGRRGLPKIHTEKNAPTTERDICHDDSTTPMRARTLEHLHSLQKKRS 67

Query: 66  APTTPIKGTEGAFAAISEEERQKQQLQSISASLASLTRETGPKLVKGDPARKSETPKAHA 125
            PTTP+  ++G F+ +SE ERQKQQL SISASLASLTRETGPKLVKGDP +K E  KA  
Sbjct: 68  TPTTPLTDSQGVFSPVSEAERQKQQLISISASLASLTRETGPKLVKGDPEKKKEAHKASV 127

Query: 126 VHH-HYHAPTISVSDSSLKFTHILYNLSPA 148
           + H H+  P +++SDS+LK THILYN SPA
Sbjct: 128 LDHLHFGEPILNLSDSALKSTHILYNPSPA 157

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BLAST of CmoCh04G008890 vs. Swiss-Prot
Match: PCKA_MAIZE (Phosphoenolpyruvate carboxykinase [ATP] OS=Zea mays PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.1e-38
Identity = 94/150 (62.67%), Postives = 110/150 (73.33%), Query Frame = 1


Query: 19  NGLSRIQT---EKKQNGICHDDSAPPVKAKTIDELHSLQRKKSAPTTPIK---------G 78
           NGL+RI+T   +K+ NG+ +DDS+ PV+A+TIDELHSLQRK+SAPTTP +         G
Sbjct: 5   NGLARIETTGKKKQDNGVWYDDSSAPVRAQTIDELHSLQRKRSAPTTPNRSAPTTPIKGG 64

Query: 79  TEGAFA-AISEEERQKQQLQSISASLASLTRETGPKLVKGDPARKSE--------TPKAH 138
               FA AISEEER  QQ+QSISASLASLTRETGPK+VKGDPA K E        TP+AH
Sbjct: 65  AHSPFAVAISEEERHTQQMQSISASLASLTRETGPKVVKGDPAAKGEAAAQGAPSTPRAH 124

Query: 139 AVHHHYHAPTISVSDSSLKFTHILYNLSPA 148
             H H  AP I+VSDSSLKFTH+L NLSPA
Sbjct: 125 QQHRHPAAPAIAVSDSSLKFTHVLNNLSPA 154

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BLAST of CmoCh04G008890 vs. Swiss-Prot
Match: PCKA_ARATH (Phosphoenolpyruvate carboxykinase [ATP] OS=Arabidopsis thaliana GN=PCKA PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 5.9e-37
Identity = 96/155 (61.94%), Postives = 112/155 (72.26%), Query Frame = 1


Query: 2   AANGNAEFSFANNGSARNGLSRIQT--EKKQNGICHDDSAPPVKAKTIDELHSLQRKKSA 61
           A NG+  FSF         + +I T   K+ +G+CHDDS P V A TIDELHSLQ+K+SA
Sbjct: 8   ATNGDGGFSFPKGPV----MPKITTGAAKRGSGVCHDDSGPTVNATTIDELHSLQKKRSA 67

Query: 62  PTTPI-KGTEGAFAAISEEERQKQQLQSISASLASLTRETGPKLVKGDPARK----SETP 121
           PTTPI +    AFAA+SEEERQK QLQSISASLASLTRE+GPK+V+GDPA K    S TP
Sbjct: 68  PTTPINQNAAAAFAAVSEEERQKIQLQSISASLASLTRESGPKVVRGDPAEKKTDGSTTP 127

Query: 122 K-AHAVHHHYHAP-TISVSDSSLKFTHILYNLSPA 148
             AH  HH   +P T +VSDSSLKFTH+LYNLSPA
Sbjct: 128 AYAHGQHHSIFSPATGAVSDSSLKFTHVLYNLSPA 158

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BLAST of CmoCh04G008890 vs. Swiss-Prot
Match: PCKA2_UROPA (Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Urochloa panicoides GN=PCK2 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 8.0e-18
Identity = 63/116 (54.31%), Postives = 69/116 (59.48%), Query Frame = 1


Query: 35  HD-DSAPPVKAKTIDELHSLQRKKSAPTTPIKGTEGAFAAISEEERQKQQLQSISASLAS 94
           HD DSA PV A+TI+ELHSLQRK +  T      +GA             LQSISASLAS
Sbjct: 14  HDSDSAAPVNAQTIEELHSLQRKAATTTK-----DGA-----------SPLQSISASLAS 73

Query: 95  LTRETGPKLVKGDPARKSETPKAHAVHHH--YHAPTISVSDSSLKFTHILYNLSPA 148
           L RE GP LVKGDP      P     H      A TI+ SDSSLKFTH+LYNLSPA
Sbjct: 74  LAREYGPNLVKGDPEATKGAPPVPIKHQQPSAAAATIAASDSSLKFTHVLYNLSPA 113

[Close]

BLAST of CmoCh04G008890 vs. Swiss-Prot
Match: PCKA1_UROPA (Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Urochloa panicoides GN=PCK1 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.2e-17
Identity = 57/111 (51.35%), Postives = 64/111 (57.66%), Query Frame = 1


Query: 37  DSAPPVKAKTIDELHSLQRKKSAPTTPIKGTEGAFAAISEEERQKQQLQSISASLASLTR 96
           DSA PV+A+TI+ELHSLQRK +A                  +     LQSISASLAS  R
Sbjct: 17  DSAAPVRAQTIEELHSLQRKAAATA----------------KDSASPLQSISASLASTAR 76

Query: 97  ETGPKLVKGDPARKSETPKAHAVHHHYHAPTISVSDSSLKFTHILYNLSPA 148
           E GP LVKGDP  K   P          A  I+ SDSSLKFTH+LYNLSPA
Sbjct: 77  EYGPNLVKGDPEAKGAPPAPVKHQQAAAAAAIAASDSSLKFTHVLYNLSPA 111

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BLAST of CmoCh04G008890 vs. TrEMBL
Match: W9SF00_9ROSA (Phosphoenolpyruvate carboxylase OS=Morus notabilis GN=L484_016098 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.0e-56
Identity = 121/150 (80.67%), Postives = 135/150 (90.00%), Query Frame = 1


Query: 1   MAANGNAEFSFANNGSARNGLSRIQTEKKQNGICHDDSAPPVKAKTIDELHSLQRKKSAP 60
           MAANGN EFSF   G+ARNGLS+IQT+KK NGICHDDSAPPVKA+TIDELHSLQ+K+SAP
Sbjct: 1   MAANGNGEFSFGK-GTARNGLSKIQTQKKNNGICHDDSAPPVKAQTIDELHSLQKKRSAP 60

Query: 61  TTPIKGTEGAFAA--ISEEERQKQQLQSISASLASLTRETGPKLVKGDPARKSETPK-AH 120
           TTPIKG +G  AA  IS+EERQKQQLQSISASLASLTRETGPKLVKGDPARKSETPK +H
Sbjct: 61  TTPIKGAQGPVAAPPISDEERQKQQLQSISASLASLTRETGPKLVKGDPARKSETPKVSH 120

Query: 121 AVHHHYHAPTISVSDSSLKFTHILYNLSPA 148
             H+++  PTISVSDS+LKFTH+LYNLSPA
Sbjct: 121 VSHNYFTCPTISVSDSALKFTHVLYNLSPA 149

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BLAST of CmoCh04G008890 vs. TrEMBL
Match: M5WHB3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002424mg PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.8e-54
Identity = 118/161 (73.29%), Postives = 138/161 (85.71%), Query Frame = 1


Query: 1   MAANGNAEFSFAN----------NGSARNGLSRIQTEKKQNGICHDDSAPPVKAKTIDEL 60
           MA+NGN EF+FAN          NG+ARNGL++IQT+KK NG+CHDDS PPVKA+TIDEL
Sbjct: 1   MASNGNGEFTFANGNGTAAVANGNGTARNGLAKIQTQKKGNGMCHDDSTPPVKAQTIDEL 60

Query: 61  HSLQRKKSAPTTPIKGTE-GAFA-AISEEERQKQQLQSISASLASLTRETGPKLVKGDPA 120
           HSLQ+KKSAPTTPIKGT+ GAFA  +SE ERQKQQLQSISASLASLTRETGPK+V+GDPA
Sbjct: 61  HSLQKKKSAPTTPIKGTQGGAFAITLSEVERQKQQLQSISASLASLTRETGPKVVRGDPA 120

Query: 121 RKSETPK--AHAVHHHYHAPTISVSDSSLKFTHILYNLSPA 148
           ++S+TPK  +H  HHH+  PTISVSDS+LKFTH+LYNLSPA
Sbjct: 121 KQSDTPKVSSHVSHHHHFTPTISVSDSALKFTHVLYNLSPA 161

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BLAST of CmoCh04G008890 vs. TrEMBL
Match: F6H8G5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s2576g00010 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.5e-52
Identity = 112/149 (75.17%), Postives = 130/149 (87.25%), Query Frame = 1


Query: 1   MAANGNA--EFSFANNGSARNGLSRIQTEKKQNGICHDDSAPPVKAKTIDELHSLQRKKS 60
           MA NGN   EFSF N   ARNGL+++QT KKQ+ ICHDDS  PVKA+TIDELHSLQ+KKS
Sbjct: 1   MAGNGNGHEEFSFNNGVVARNGLAKVQTHKKQSEICHDDSTTPVKAQTIDELHSLQKKKS 60

Query: 61  APTTPIKGTEGAFAAISEEERQKQQLQSISASLASLTRETGPKLVKGDPARKSE-TPKAH 120
           APTTPIKG+EGAFA IS+EERQ+ QLQSISASLASLTRETGPK+VKGDPARK++ TPK+H
Sbjct: 61  APTTPIKGSEGAFATISDEERQQLQLQSISASLASLTRETGPKVVKGDPARKTDTTPKSH 120

Query: 121 AVHHHYHAPTISVSDSSLKFTHILYNLSP 147
             HHH+  PT+++SDS+LKFTHILYNLSP
Sbjct: 121 VTHHHF-TPTLNISDSALKFTHILYNLSP 148

[Close]

BLAST of CmoCh04G008890 vs. TrEMBL
Match: I1J4W3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G019200 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 7.7e-52
Identity = 113/148 (76.35%), Postives = 126/148 (85.14%), Query Frame = 1


Query: 1   MAANGNAEFSFAN-NGSARNGLSRIQTEKKQNGICHDDSAPPVKAKTIDELHSLQRKKSA 60
           MA+NGN   S AN NGSARNGL++IQT+KK +GICHDDS P VKA+TIDELHSLQ+KKSA
Sbjct: 1   MASNGNG--SVANGNGSARNGLAKIQTQKKHDGICHDDSGPTVKAQTIDELHSLQKKKSA 60

Query: 61  PTTPIKGTEGAFAAISEEERQKQQLQSISASLASLTRETGPKLVKGDPARKSETPKAHAV 120
           PTTP+ G +  FA ++EEER KQQLQSISASLASLTRETGPKLVKGDPARKS+T K   V
Sbjct: 61  PTTPVTGFQAPFATLTEEERHKQQLQSISASLASLTRETGPKLVKGDPARKSDTQKVTHV 120

Query: 121 HHHYHAPTISVSDSSLKFTHILYNLSPA 148
           HHH   PTI VSDSSLKFTH+LYNLSPA
Sbjct: 121 HHHVSTPTIVVSDSSLKFTHVLYNLSPA 146

[Close]

BLAST of CmoCh04G008890 vs. TrEMBL
Match: A0A0B2PBB0_GLYSO (Phosphoenolpyruvate carboxykinase [ATP] OS=Glycine soja GN=glysoja_024248 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 7.7e-52
Identity = 113/148 (76.35%), Postives = 126/148 (85.14%), Query Frame = 1


Query: 1   MAANGNAEFSFAN-NGSARNGLSRIQTEKKQNGICHDDSAPPVKAKTIDELHSLQRKKSA 60
           MA+NGN   S AN NGSARNGL++IQT+KK +GICHDDS P VKA+TIDELHSLQ+KKSA
Sbjct: 1   MASNGNG--SVANGNGSARNGLAKIQTQKKHDGICHDDSGPTVKAQTIDELHSLQKKKSA 60

Query: 61  PTTPIKGTEGAFAAISEEERQKQQLQSISASLASLTRETGPKLVKGDPARKSETPKAHAV 120
           PTTP+ G +  FA ++EEER KQQLQSISASLASLTRETGPKLVKGDPARKS+T K   V
Sbjct: 61  PTTPVTGFQAPFATLTEEERHKQQLQSISASLASLTRETGPKLVKGDPARKSDTQKVTHV 120

Query: 121 HHHYHAPTISVSDSSLKFTHILYNLSPA 148
           HHH   PTI VSDSSLKFTH+LYNLSPA
Sbjct: 121 HHHVSTPTIVVSDSSLKFTHVLYNLSPA 146

[Close]

BLAST of CmoCh04G008890 vs. TAIR10
Match: AT4G37870.1 (AT4G37870.1 phosphoenolpyruvate carboxykinase 1)

HSP 1 Score: 155.6 bits (392), Expect = 3.3e-38
Identity = 96/155 (61.94%), Postives = 112/155 (72.26%), Query Frame = 1


Query: 2   AANGNAEFSFANNGSARNGLSRIQT--EKKQNGICHDDSAPPVKAKTIDELHSLQRKKSA 61
           A NG+  FSF         + +I T   K+ +G+CHDDS P V A TIDELHSLQ+K+SA
Sbjct: 8   ATNGDGGFSFPKGPV----MPKITTGAAKRGSGVCHDDSGPTVNATTIDELHSLQKKRSA 67

Query: 62  PTTPI-KGTEGAFAAISEEERQKQQLQSISASLASLTRETGPKLVKGDPARK----SETP 121
           PTTPI +    AFAA+SEEERQK QLQSISASLASLTRE+GPK+V+GDPA K    S TP
Sbjct: 68  PTTPINQNAAAAFAAVSEEERQKIQLQSISASLASLTRESGPKVVRGDPAEKKTDGSTTP 127

Query: 122 K-AHAVHHHYHAP-TISVSDSSLKFTHILYNLSPA 148
             AH  HH   +P T +VSDSSLKFTH+LYNLSPA
Sbjct: 128 AYAHGQHHSIFSPATGAVSDSSLKFTHVLYNLSPA 158

[Close]

BLAST of CmoCh04G008890 vs. TAIR10
Match: AT5G65690.1 (AT5G65690.1 phosphoenolpyruvate carboxykinase 2)

HSP 1 Score: 124.4 bits (311), Expect = 8.2e-29
Identity = 86/164 (52.44%), Postives = 101/164 (61.59%), Query Frame = 1


Query: 1   MAANGN----AEFSFANNGSARNGLSRIQTEK--KQNG---ICHDDSAPPVKAKTIDELH 60
           MA NGN     +FSF+   +AR+ L RI TEK  K  G   +C DD AP V  +TIDELH
Sbjct: 1   MAGNGNESTGGDFSFSA-AAARDALPRITTEKGGKSPGPADVCQDDIAPRVNFQTIDELH 60

Query: 61  SLQRKKSAPTTPIK--------GTEGAFAAISEEERQKQQLQSISASLASLTRETGPKLV 120
           SLQ+K+SAPTTP++        GT G    +S E      LQS+SASLASLTRETGPKL+
Sbjct: 61  SLQKKRSAPTTPLRDGSASGVSGTSGPTTPVSSE----TMLQSVSASLASLTRETGPKLI 120

Query: 121 KGDPARKSETPKAHAVHHHYHAPTISVSDSSLKFTHILYNLSPA 148
           +GDP   S    AH        P   VSDS LKFTHIL+NLSPA
Sbjct: 121 RGDPT--SAAKVAHVPVTPTSLPAADVSDSGLKFTHILHNLSPA 157

[Close]

BLAST of CmoCh04G008890 vs. NCBI nr
Match: gi|659111183|ref|XP_008455621.1| (PREDICTED: phosphoenolpyruvate carboxykinase [ATP])

HSP 1 Score: 263.1 bits (671), Expect = 4.2e-67
Identity = 132/147 (89.80%), Postives = 141/147 (95.92%), Query Frame = 1


Query: 1   MAANGNAEFSFANNGSARNGLSRIQTEKKQNGICHDDSAPPVKAKTIDELHSLQRKKSAP 60
           MAANGN+EFSF NNGSARNGL++IQT+KKQNGICHDDSAPPVKA+TIDELHSLQ+KKSAP
Sbjct: 1   MAANGNSEFSFTNNGSARNGLTKIQTQKKQNGICHDDSAPPVKAQTIDELHSLQKKKSAP 60

Query: 61  TTPIKGTEGAFAAISEEERQKQQLQSISASLASLTRETGPKLVKGDPARKSETPKAHAVH 120
           TTPIKGTEG F  +SEEERQKQQLQSISASLASLTRETGPKLVKGDPARKSETPKAH VH
Sbjct: 61  TTPIKGTEGTFGVLSEEERQKQQLQSISASLASLTRETGPKLVKGDPARKSETPKAHTVH 120

Query: 121 HHYHAPTISVSDSSLKFTHILYNLSPA 148
           HH+ APTISVSDSSLKFTH+LYNLSPA
Sbjct: 121 HHHDAPTISVSDSSLKFTHVLYNLSPA 147

[Close]

BLAST of CmoCh04G008890 vs. NCBI nr
Match: gi|720062602|ref|XP_010275511.1| (PREDICTED: phosphoenolpyruvate carboxykinase [ATP])

HSP 1 Score: 230.7 bits (587), Expect = 2.3e-57
Identity = 119/144 (82.64%), Postives = 132/144 (91.67%), Query Frame = 1


Query: 4   NGNAEFSFANNGSARNGLSRIQTEKKQNGICHDDSAPPVKAKTIDELHSLQRKKSAPTTP 63
           +GNAEFSF   G+ARNGL+RIQT+KKQNGICHDDSA PVKA+TIDELHSLQ+KKSAPTTP
Sbjct: 8   SGNAEFSFTGVGTARNGLARIQTQKKQNGICHDDSASPVKAQTIDELHSLQKKKSAPTTP 67

Query: 64  IKGTEGAFAAISEEERQKQQLQSISASLASLTRETGPKLVKGDPARKSETPKAHAVHHHY 123
           IKGT+GAFA ISE+ERQKQQL+SISASLASLTRETGPK+VKGDPARKSETP+   VH H 
Sbjct: 68  IKGTQGAFATISEDERQKQQLKSISASLASLTRETGPKVVKGDPARKSETPR--VVHSHQ 127

Query: 124 HAPTISVSDSSLKFTHILYNLSPA 148
           H PTI VSDS+LKFTH+LYNLSPA
Sbjct: 128 HTPTIVVSDSALKFTHVLYNLSPA 149

[Close]

BLAST of CmoCh04G008890 vs. NCBI nr
Match: gi|719995940|ref|XP_010254660.1| (PREDICTED: phosphoenolpyruvate carboxykinase [ATP])

HSP 1 Score: 229.6 bits (584), Expect = 5.1e-57
Identity = 118/144 (81.94%), Postives = 130/144 (90.28%), Query Frame = 1


Query: 4   NGNAEFSFANNGSARNGLSRIQTEKKQNGICHDDSAPPVKAKTIDELHSLQRKKSAPTTP 63
           NGN EFSF N  +A NGL+RIQT KKQNGICHDDS+PPVKA+TIDELHSLQ+KKSAPTTP
Sbjct: 8   NGNQEFSFKNVAAAGNGLARIQTHKKQNGICHDDSSPPVKAQTIDELHSLQKKKSAPTTP 67

Query: 64  IKGTEGAFAAISEEERQKQQLQSISASLASLTRETGPKLVKGDPARKSETPKAHAVHHHY 123
           IKGT+GAFA ISEEERQKQQLQSISASLASLTRETGPK+VKGDPARKSETP+    H H+
Sbjct: 68  IKGTQGAFATISEEERQKQQLQSISASLASLTRETGPKVVKGDPARKSETPR--VAHEHH 127

Query: 124 HAPTISVSDSSLKFTHILYNLSPA 148
           + P IS+SDS+LKFTHILYNLSPA
Sbjct: 128 YTPAISISDSALKFTHILYNLSPA 149

[Close]

BLAST of CmoCh04G008890 vs. NCBI nr
Match: gi|703132375|ref|XP_010105109.1| (Phosphoenolpyruvate carboxylase [Morus notabilis])

HSP 1 Score: 226.5 bits (576), Expect = 4.3e-56
Identity = 121/150 (80.67%), Postives = 135/150 (90.00%), Query Frame = 1


Query: 1   MAANGNAEFSFANNGSARNGLSRIQTEKKQNGICHDDSAPPVKAKTIDELHSLQRKKSAP 60
           MAANGN EFSF   G+ARNGLS+IQT+KK NGICHDDSAPPVKA+TIDELHSLQ+K+SAP
Sbjct: 1   MAANGNGEFSFGK-GTARNGLSKIQTQKKNNGICHDDSAPPVKAQTIDELHSLQKKRSAP 60

Query: 61  TTPIKGTEGAFAA--ISEEERQKQQLQSISASLASLTRETGPKLVKGDPARKSETPK-AH 120
           TTPIKG +G  AA  IS+EERQKQQLQSISASLASLTRETGPKLVKGDPARKSETPK +H
Sbjct: 61  TTPIKGAQGPVAAPPISDEERQKQQLQSISASLASLTRETGPKLVKGDPARKSETPKVSH 120

Query: 121 AVHHHYHAPTISVSDSSLKFTHILYNLSPA 148
             H+++  PTISVSDS+LKFTH+LYNLSPA
Sbjct: 121 VSHNYFTCPTISVSDSALKFTHVLYNLSPA 149

[Close]

BLAST of CmoCh04G008890 vs. NCBI nr
Match: gi|658037482|ref|XP_008354307.1| (PREDICTED: phosphoenolpyruvate carboxykinase [ATP])

HSP 1 Score: 223.0 bits (567), Expect = 4.8e-55
Identity = 119/162 (73.46%), Postives = 139/162 (85.80%), Query Frame = 1


Query: 1   MAANGNAEFSFAN-----------NGSARNGLSRIQTEKKQNGICHDDSAPPVKAKTIDE 60
           MA+NGN EFSFA+           NG+ARNGL++IQT+KK NG+CHDDS PPVKA+TIDE
Sbjct: 1   MASNGNGEFSFASGNGTVATAANGNGTARNGLAKIQTQKKDNGVCHDDSTPPVKAQTIDE 60

Query: 61  LHSLQRKKSAPTTPIKGTE-GAFA-AISEEERQKQQLQSISASLASLTRETGPKLVKGDP 120
           LHSLQ+KKSAPTTPIKGT+ GAFA  +SEEERQKQQLQSISASLASLTRETGPK+V+GDP
Sbjct: 61  LHSLQKKKSAPTTPIKGTQGGAFAVTLSEEERQKQQLQSISASLASLTRETGPKVVRGDP 120

Query: 121 ARKSETPK--AHAVHHHYHAPTISVSDSSLKFTHILYNLSPA 148
           A++S+TPK  +H  HHH+  PTISVSDS+LKFTH+LYNLSPA
Sbjct: 121 AKQSDTPKVSSHVSHHHHFTPTISVSDSALKFTHVLYNLSPA 162

The following BLAST results are available for this feature:

BLAST of CmoCh04G008890 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PCKA_CUCSA	8.2e-39	58.67	Phosphoenolpyruvate carboxykinase [ATP] OS=Cucumis sativus GN=PCK PE=2 SV=1	[more]
PCKA_MAIZE	3.1e-38	62.67	Phosphoenolpyruvate carboxykinase [ATP] OS=Zea mays PE=2 SV=1	[more]
PCKA_ARATH	5.9e-37	61.94	Phosphoenolpyruvate carboxykinase [ATP] OS=Arabidopsis thaliana GN=PCKA PE=1 SV=...	[more]
PCKA2_UROPA	8.0e-18	54.31	Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Urochloa panicoides GN=PCK2 PE=2 SV...	[more]
PCKA1_UROPA	5.2e-17	51.35	Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Urochloa panicoides GN=PCK1 PE=1 SV...	[more]

BLAST of CmoCh04G008890 vs. TrEMBL


Match Name	E-value	Identity	Description
W9SF00_9ROSA	3.0e-56	80.67	Phosphoenolpyruvate carboxylase OS=Morus notabilis GN=L484_016098 PE=3 SV=1	[more]
M5WHB3_PRUPE	2.8e-54	73.29	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002424mg PE=3 SV=1	[more]
F6H8G5_VITVI	3.5e-52	75.17	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s2576g00010 PE=4 SV=...	[more]
I1J4W3_SOYBN	7.7e-52	76.35	Uncharacterized protein OS=Glycine max GN=GLYMA_01G019200 PE=3 SV=1	[more]
A0A0B2PBB0_GLYSO	7.7e-52	76.35	Phosphoenolpyruvate carboxykinase [ATP] OS=Glycine soja GN=glysoja_024248 PE=3 S...	[more]

BLAST of CmoCh04G008890 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G37870.1	3.3e-38	61.94	phosphoenolpyruvate carboxykinase 1	[more]
AT5G65690.1	8.2e-29	52.44	phosphoenolpyruvate carboxykinase 2	[more]

BLAST of CmoCh04G008890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659111183\|ref\|XP_008455621.1\|	4.2e-67	89.80	PREDICTED: phosphoenolpyruvate carboxykinase [ATP]	[more]
gi\|720062602\|ref\|XP_010275511.1\|	2.3e-57	82.64	PREDICTED: phosphoenolpyruvate carboxykinase [ATP]	[more]
gi\|719995940\|ref\|XP_010254660.1\|	5.1e-57	81.94	PREDICTED: phosphoenolpyruvate carboxykinase [ATP]	[more]
gi\|703132375\|ref\|XP_010105109.1\|	4.3e-56	80.67	Phosphoenolpyruvate carboxylase [Morus notabilis]	[more]
gi\|658037482\|ref\|XP_008354307.1\|	4.8e-55	73.46	PREDICTED: phosphoenolpyruvate carboxykinase [ATP]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015976	carbon utilization
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006099	tricarboxylic acid cycle
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G008890.1	CmoCh04G008890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 77..97 scor
None	No IPR available	PANTHER	PTHR30031	PHOSPHOENOLPYRUVATE CARBOXYKINASE ATP	coord: 72..147 score: 2.8
None	No IPR available	PANTHER	PTHR30031:SF4	SUBFAMILY NOT NAMED	coord: 72..147 score: 2.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G008890	Lsi03G009170	Bottle gourd (USVL1VR-Ls)	cmolsiB651
CmoCh04G008890	Cp4.1LG14g01050	Cucurbita pepo (Zucchini)	cmocpeB667
CmoCh04G008890	Cp4.1LG01g09250	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G008890	Cla97C10G192070	Watermelon (97103) v2	cmowmbB689
CmoCh04G008890	Bhi11G000815	Wax gourd	cmowgoB0818
CmoCh04G008890	Carg14232	Silver-seed gourd	carcmoB1259
CmoCh04G008890	Carg05837	Silver-seed gourd	carcmoB1371

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G008890	CmoCh16G007790	Cucurbita moschata (Rifu)	cmocmoB285

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G008890	Cucumber (Chinese Long) v3	cmocucB0831
CmoCh04G008890	Cucumber (Chinese Long) v3	cmocucB0909
CmoCh04G008890	Watermelon (97103) v2	cmowmbB682
CmoCh04G008890	Cucurbita moschata (Rifu)	cmocmoB451
CmoCh04G008890	Cucumber (Gy14) v1	cgycmoB0229
CmoCh04G008890	Cucurbita maxima (Rimu)	cmacmoB337
CmoCh04G008890	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G008890	Wild cucumber (PI 183967)	cmocpiB711
CmoCh04G008890	Wild cucumber (PI 183967)	cmocpiB775
CmoCh04G008890	Cucumber (Chinese Long) v2	cmocuB703
CmoCh04G008890	Cucumber (Chinese Long) v2	cmocuB768
CmoCh04G008890	Melon (DHL92) v3.5.1	cmomeB690
CmoCh04G008890	Melon (DHL92) v3.5.1	cmomeB702
CmoCh04G008890	Watermelon (Charleston Gray)	cmowcgB616
CmoCh04G008890	Watermelon (Charleston Gray)	cmowcgB641
CmoCh04G008890	Watermelon (97103) v1	cmowmB649
CmoCh04G008890	Watermelon (97103) v1	cmowmB711
CmoCh04G008890	Cucurbita pepo (Zucchini)	cmocpeB655
CmoCh04G008890	Bottle gourd (USVL1VR-Ls)	cmolsiB628
CmoCh04G008890	Cucumber (Gy14) v2	cgybcmoB519
CmoCh04G008890	Cucumber (Gy14) v2	cgybcmoB824
CmoCh04G008890	Melon (DHL92) v3.6.1	cmomedB784
CmoCh04G008890	Melon (DHL92) v3.6.1	cmomedB801