CmoCh04G008840 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G008840
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ubiquitin carboxyl-terminal hydrolase (3.4.19.12)
Location	Cmo_Chr04 : 4441465 .. 4447480 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCATACCAGACCTCCTCTCATTTCCTTCGTCTCCATTCTTCGTGCTTCCACACAAACCCTCCTCCCATCTTCCTTCACTCTCTGCAACCAGAAATTCGACGCAACTCAACTCAATCACGCTCCCCAAAACCCTAGAGATTCCGACTACGGAAGCCAGGAACCTTTCAATTGGGAGAGTTTTCTGATTTTCTTTTTATATGGAGAGCAATTTCTTGATTAAGATCTGAGTTGGTGTTTGATTCTTTGATTTCGACACGCGAATGGGTGCTACGGGCTCCAAGCTCGAGAAGGCTCTCGGTGACCAGTTTCCTGAAGGCGAGCGCTACTTCGGCCTTGAAAATTTTGGCAATACTTGTTACTGTAACAGCGTCTTGCAGGTTTGCTCTTTGTTTGTGGGATGCATCATGCTTCTCGCTGGATTTTAATTTGTCTTTTTCCGAGGATCTTCGTTGGTTTTTTTCTTTTTTGCTAGGGTTTTGTTTATTTATTGGTGCATTTGTTGCGTGCGTTTGTTTGGTCTTTAATTGCTAAAGTGGCGGTCGATGGATTTCTTCGTTGGATTATGATTGGATTTCATAGCCATTTCTGTATTCGTTTTCGTTGGTTTCGTTCATTATTCATTTTGATTAAAAAATGATCGTGGCGTTGACATTCTTTATCATTCAAGTAATTGGATTTCTAACTTCTGGTTTCCATTGCGAGAGACTATTTTAACCTAAAAGTAGGATTACAGGTTCTTAGTCGTCAGGGTAAGGTTTTCGTTCAACTTTTCCTCGTGAAATTACTTGTTAATTGTTTTGGGGAACGACTCTCTTGCCTCTTAGCATATTTTCAGTATTAGGGAACAAACAGAAACGATACTGAAATCCTCTATCATGCATTGGTTGATTGCTTCTTTATCTTTTTAAAATTCTGTATTATTTTAAACATATCATGAGTACCACTTCATCTCATTTCGTTTATATATGTTTTACGAAATGCACTTTACTTATACGCATGTAGATACCTTGGTTTGGGGTTTGGTTCTTTTCCAATTTCTTGAAATCTATGACGTTCTTGGTTTCATGTGAAAAATAAATAAAGAAAGAAAACATTTGCCTGCAGCATGCTTGTGTTGTTCAATGTGTTTACAATTGGATAGACTCAATTAGTCTAATGTGAGACGTTGATTCTTCATTTCATGTTTTGATTGTCTTATAAACATGGTTGCCTTTTACTTTTTCCAACACAATTTTTTTTGCTCTCCTTTAGATGTATTGAATGGGTATCTGTTGTTGGCCCTTTCAGAGTTGTATTATAACTCTTGCTTTTTTGTTCCTTTTTAGTAAGCAATTTTATCCCTTAAATTTACGGGGGTATGTCCCTCTTGGCTTATCTTGTAAATGATTATTCATGTATTAAACAAATCACCTTCCTGGATGAGCAACACTACTTTTAGTTGAAAATATATGGATGCAATATTTTTATTTTATTTTATTTTACTCTCTTTTTGTTTTATGCGTGATGTGATTTAATATCATGCTGTTAACTTGTGAGTTGTATGAATTCAATTATTCAAATGTCAGCATGTTCAAAGTGGAAAGTATACAATTTTAAAAGAACATGTTTATTTATTCAGAAGTTTATCTAATAATGGGATTCTAGGAGTCTTAACTGAAGATGGTATTTAAGTTCACGACTGCTATGAGTTTTCCATTATTTTACTGAAATGTCAAATAATACTTTAGGTTCTTTTATTATCTGTATCATCTTTGCTCAGGTTGATGATAGATCCATGTCGATGTAAATTTTTTCAAGGTCCTAGAGATATTTTGTTTAGAACCAGTTATGAAAGCATCTGCTAAATATCCAGCTTGATATTTTCTTTGATTTATCTAATAATTCCGAAATTTTTAATGATATCCCACGCACCATTTTTCTTTTATATGCAGGCACTGTATTTTTGTGTTCCTTTCCGGGAGCAGTTGTTAGATTATTACTCAAATAACAAAAGTAGTGGAGATGCGGAAGAAAATCTTCTAACATGCTTGGCAGATTTGTTCACCCAGGTAATTTGGGGGAGGAAAAGAAAGCAATGCGTGTTTTACTTGGGTTCATTGCTTGCTTGTTCTTGCCTGACAGGATTTGTGCTGTTTCTGCTTTGCTGTAGCTTTATTGTTCATGTTTGCAGAAATTATTTAATAGAGACTTTAAAAATCTAAACCTAGCATAGAAGATGTTGATTTGTAGAGCATACTAATGATTACATCTGAAGAATTTTATAACATATATTTTCTTTATTGCCAATTAACTTCTTCTTGAAGCACTTTTCTGCTCGTTCCAGGACATTATGAACATACTACAAGGGATAATCAAGAATTTGTACGGAAATACAATTTCAAAACCATAACCCTATTTTACTAAAAAAATCGCTAGTATGGTATTTCTTTAACTACATTTGCTTATAGAAGCAAATAGTAGGAGGTTAATAGCCTTAAACAAATAAGTAAGGAAAACAAAGTGGCTTGGGGGATCTGGCCTCAGCGCTACTCAATGTAATGTGCATGAATTTGTGGAGGGGATAGAGACTGGCCAATTGTTGACGTTGCTTACTTCTCCAAGAGTAGGAGGTTAATGGTTCTCTGTGTACAAGCTTTATTGCTGAGATTATATGAGTATTTAAATTGACGAAGTTAAGTCCATCGTGTCGGCATATATGAAATCTTCGAGAAAGTTCTTAAAGAAAATTCGTTTGTTCCCTTTTCAAAATAATAAAGTTTAAGGGGTCTTTTTCATGATATAATGTAGGGACACTTTGCCTTCTTTTCTTCTGCTATGGCATCTTTATTCTTTGAAATATGCATGTGGCTTCTGTCATCCCCTACATTATATCATGAAGAAGACCAATAAATTTTTACCAAGATAATTTAAGGTTAAAATTGCAGAAAAAAGTTTAACCCAACTCCAAAAGCAATTTCATTTCATGCCCCCATGACTATCAATTTTAACCTTAAATTCATCTTGGTAAAAATAAATAAAATAAATATGGAAAACAATAATAAGTGAAAGAAATATATGGCATCTTTATCCTATTTAGTTTTTGAGATCCATCTTTCACGTCGTGACCTCAAAGAAGAGCTCTTTCTGTTGTTAGGTTGGAATATAATAATCTTTTATTCACTTCTGATTGCAGATAAGTTCACAAAAGAAAAAAACTGGTGTAATTGCTCCAAAGCGCTTTGTTCAGAGATTGAAAAAGCAGAATGAGATTTTCCGTAGCTATATGCACCAAGTACGTTCTGAATTTTGATTTTGAATGTCCCTTCTTTGATTCTTACCAAAACATGGATTCATTTTTTATATTTTTCTTTCACTTCATTTTCCTTTCCTTGATAACACTATGAAAATACAAATTTCATTCATATTGGTCACATCAATTTTGTACTTGAATAAATGTGTTCAAATCTTCCCTGCTATTTTATCTTAGCTGGCAACTGTTTATGTAGGATGCTCATGAATTTTTGAACTTTTTGCTCAACGAACTTGTTGACATACTGGAGAAAGAGGCACATGCTACTAAAAGTGATGCAGAAAGTTCGTCTCCGTCTGAAAAAATTGCAAATGGTCCTAAGACTGGCCAGGCAAATGGTTCTCAAAAAGAGCCGTTGGTGACTTGGGTGCATAAAAATTTTCAGGTGATTTAGCTAGCCATTTTTGATGACATGCTCCCTATCCAACTTTGTATTTTCTTTTCTGCTCGGCTATAGGGCATGGAATATGCATATGGTTGGTGAGAAATACTAATTAGATGAATGTTATTTCAGCCTTCCTGTGTCTGTGTTTGCATGCTTTCACTTGCTAGTTAGTACATCAAAAGTATGTTAAAAGCAGCTCTTTATTTGGATATAATCATGAGTATTACTCACTCATGTTTTCGTGGTTTTTTTTTTTTTAATGAACTGACAGGCCATCTAGTACGACCCTGCCACTCTATCTCGAGCCCTACTCCTCCCTTAGAAAATATAAAAAGATTACTAACTTTGTTTTGACCTTCAAGAGAATTAGAAGCCTCTACTTACAGGTTCACTCGACCATCTGGATATTTCTAATAATAGATGCACTTTAGAAAATATAAGTCATATGAAAATCTTTACGACCAAAATATGGAACAGCCTATTGGAATGTGGACAAGATCAGTACTCTTGACGCAAGCCTCAGACTCTATTAAGGACTTGATCTTGAATACAGAGACCTGGCCATCTCCAATAGAACTCTATTTTGCACACCATGCCAAATTAGTATGCAAGCCTTAGAAGTAACGATGTTATATGCATGAAAAACTTCTAATTGCAGCCAGAGTTACTTGCAATTCTGTTTTTCAGGGCTTACTAACCAACGAGACAAGGTGCTTGCGGTGTGAGACGGTTACAGCGAGGGATGAAACTTTTCTTGACTTGAGCCTTGATATTGAACAGAACAGTTCAATAACTAGCTGCTTAAAAAATTTCAGTTCCACTGAGACATTGAATGCCGAGGACAAGTTTTTCTGCGACAAGTGCTGCAGGTAGGTTGCTATACATGATTCTGTTTTGCCGCCAGATGCTTTTTTAGCTTTAGGAATTGTAATTTATATCATGTACTTTATGAAGGCAATTTTGGAAGTAGCCAAGTGTGCTGTCTATTTGATCTTAGCCAAGCTACGAAATTGAAGTCAAGTGCTTAAAAACACTTTTTAGTACTTAAAACCCTTCTTTTAAGCACTTGGAAAGTCATTTCAAACTGGCCTTAGTTGGGTTGCTGAATTTTTTTTATTATTGTTTTTATTTCTTGAGAAATCAGCCTTATTCTTATTTTGTTTTGTCTCCACCATCTTCCAAGTAGCAAGCATAATCTCATGTTAATAGTTGGGACTGGAATGGAACTTAATGATTCGTCATGTCCCATACCAGTGGTTTGTGTGCGTGGATCCATATGTAGATATTGATCGTGAATAATAGTGTAGTCAGTATCTTTAACCCCCCACGGTTATGGATGGAATTGGAAAACCAGTTCCACAATTATTTCCAACCCACAACAAATTAAAATTAAGTAATAAAAACCAAAGAGGGAATGCTGAAAGATGGGCTCATTTTGGTGTGCAGTTTGCAAGAAGCACAGAAGAGGATGAAGATTAAGAAACCACCTCATATCCTTGTTATTCACCTGAAGCGGTTTAAATACATTGAGCAGCTTGGGCGGTATAAAAAGCTGTTATACAGAGTTGTTTTCCCTCTCGAGCTGAAGCTTAGCAACACAATGGAGGATGCGGATTCTGAGTACTCTTTGTTTGCTGTCGTGGTCCATGTTGGAAGTGGACCCAACCACGGACACTACGTTAGCCTTGTGAAAAGCCATAACCACTGGTTATTTTTTGATGACGAAAATGTGGAAATGATTGACGAGTCTGTTGTGCAGACATTCTTTGGATCTGCACAAGAATATTCTAGCAATACTGATCATGGGTACATCCTATTCTACGAGAGTATTGGCGCCGGCAACAAGAGCTGATATATAGGGAATTCCCATTTCATCGGCTGTCGGGTAATTTATGACTCGCTTTTTTGGCTTTGCATGTTTATTAATGTTATTATTACTTTTTTTTTCCCTTTCTTTTTCCCCCCTTATGCCTTTTATATAACCATTGGGAAGAGATGTGAAATATTATTGTTGTTATGGACTGAAAAATGTATACATGGTCGGTTGCCAGTTTGGCATACATAGTGTTTGGCGGCAGCTTTTCTTTTCCCCTTCAAATAAGTGAAAAGAGAGCAATGTATGATGTCTTATGACTGCTGCTTTAGAGGAAAGACTGTTCTGATTCTGCTTCGTAGTATGATTCTGATACAACAATGTATGAAATTTCTCATTGCAAATCCACGAGTGTGAATAGTTGTAGATGTAATTTTACCCAAGTATATCTCAGTTTCCTGGAACAAAGAATATGTTTCGTGTCCATGAAATTGCAGCCCGTTAATGGTTTATTTTTTTTCAATCGTG

mRNA sequence

ACCATACCAGACCTCCTCTCATTTCCTTCGTCTCCATTCTTCGTGCTTCCACACAAACCCTCCTCCCATCTTCCTTCACTCTCTGCAACCAGAAATTCGACGCAACTCAACTCAATCACGCTCCCCAAAACCCTAGAGATTCCGACTACGGAAGCCAGGAACCTTTCAATTGGGAGAGTTTTCTGATTTTCTTTTTATATGGAGAGCAATTTCTTGATTAAGATCTGAGTTGGTGTTTGATTCTTTGATTTCGACACGCGAATGGGTGCTACGGGCTCCAAGCTCGAGAAGGCTCTCGGTGACCAGTTTCCTGAAGGCGAGCGCTACTTCGGCCTTGAAAATTTTGGCAATACTTGTTACTGTAACAGCGTCTTGCAGTTGTTAGATTATTACTCAAATAACAAAAGTAGTGGAGATGCGGAAGAAAATCTTCTAACATGCTTGGCAGATTTGTTCACCCAGATAAGTTCACAAAAGAAAAAAACTGGTGTAATTGCTCCAAAGCGCTTTGTTCAGAGATTGAAAAAGCAGAATGAGATTTTCCGTAGCTATATGCACCAAGATGCTCATGAATTTTTGAACTTTTTGCTCAACGAACTTGTTGACATACTGGAGAAAGAGGCACATGCTACTAAAAGTGATGCAGAAAGTTCGTCTCCGTCTGAAAAAATTGCAAATGGTCCTAAGACTGGCCAGGCAAATGGTTCTCAAAAAGAGCCGTTGGTGACTTGGGTGCATAAAAATTTTCAGCCTATTGGAATGTGGACAAGATCAGTACTCTTGACGCAAGCCTCAGACTCTATTAAGGACTTGATCTTGAATACAGAGACCTGGCCATCTCCAATAGAACTCTATTTTGCACACCATGCCAAATTAGGCTTACTAACCAACGAGACAAGGTGCTTGCGGTGTGAGACGGTTACAGCGAGGGATGAAACTTTTCTTGACTTGAGCCTTGATATTGAACAGAACAGTTCAATAACTAGCTGCTTAAAAAATTTCAGTTCCACTGAGACATTGAATGCCGAGGACAAGTTTTTCTGCGACAAGTGCTGCAGTTTGCAAGAAGCACAGAAGAGGATGAAGATTAAGAAACCACCTCATATCCTTGTTATTCACCTGAAGCGGTTTAAATACATTGAGCAGCTTGGGCGGTATAAAAAGCTGTTATACAGAGTTGTTTTCCCTCTCGAGCTGAAGCTTAGCAACACAATGGAGGATGCGGATTCTGAGTACTCTTTGTTTGCTGTCGTGGTCCATGTTGGAAGTGGACCCAACCACGGACACTACGTTAGCCTTGTGAAAAGCCATAACCACTGGTTATTTTTTGATGACGAAAATGTGGAAATGATTGACGAGTCTGTTGTGCAGACATTCTTTGGATCTGCACAAGAATATTCTAGCAATACTGATCATGGGTACATCCTATTCTACGAGAGTATTGGCGCCGGCAACAAGAGCTGATATATAGGGAATTCCCATTTCATCGGCTGTCGGGTAATTTATGACTCGCTTTTTTGGCTTTGCATGTTTATTAATGTTATTATTACTTTTTTTTTCCCTTTCTTTTTCCCCCCTTATGCCTTTTATATAACCATTGGGAAGAGATGTGAAATATTATTGTTGTTATGGACTGAAAAATGTATACATGGTCGGTTGCCAGTTTGGCATACATAGTGTTTGGCGGCAGCTTTTCTTTTCCCCTTCAAATAAGTGAAAAGAGAGCAATGTATGATGTCTTATGACTGCTGCTTTAGAGGAAAGACTGTTCTGATTCTGCTTCGTAGTATGATTCTGATACAACAATGTATGAAATTTCTCATTGCAAATCCACGAGTGTGAATAGTTGTAGATGTAATTTTACCCAAGTATATCTCAGTTTCCTGGAACAAAGAATATGTTTCGTGTCCATGAAATTGCAGCCCGTTAATGGTTTATTTTTTTTCAATCGTG

Coding sequence (CDS)

ATGGGTGCTACGGGCTCCAAGCTCGAGAAGGCTCTCGGTGACCAGTTTCCTGAAGGCGAGCGCTACTTCGGCCTTGAAAATTTTGGCAATACTTGTTACTGTAACAGCGTCTTGCAGTTGTTAGATTATTACTCAAATAACAAAAGTAGTGGAGATGCGGAAGAAAATCTTCTAACATGCTTGGCAGATTTGTTCACCCAGATAAGTTCACAAAAGAAAAAAACTGGTGTAATTGCTCCAAAGCGCTTTGTTCAGAGATTGAAAAAGCAGAATGAGATTTTCCGTAGCTATATGCACCAAGATGCTCATGAATTTTTGAACTTTTTGCTCAACGAACTTGTTGACATACTGGAGAAAGAGGCACATGCTACTAAAAGTGATGCAGAAAGTTCGTCTCCGTCTGAAAAAATTGCAAATGGTCCTAAGACTGGCCAGGCAAATGGTTCTCAAAAAGAGCCGTTGGTGACTTGGGTGCATAAAAATTTTCAGCCTATTGGAATGTGGACAAGATCAGTACTCTTGACGCAAGCCTCAGACTCTATTAAGGACTTGATCTTGAATACAGAGACCTGGCCATCTCCAATAGAACTCTATTTTGCACACCATGCCAAATTAGGCTTACTAACCAACGAGACAAGGTGCTTGCGGTGTGAGACGGTTACAGCGAGGGATGAAACTTTTCTTGACTTGAGCCTTGATATTGAACAGAACAGTTCAATAACTAGCTGCTTAAAAAATTTCAGTTCCACTGAGACATTGAATGCCGAGGACAAGTTTTTCTGCGACAAGTGCTGCAGTTTGCAAGAAGCACAGAAGAGGATGAAGATTAAGAAACCACCTCATATCCTTGTTATTCACCTGAAGCGGTTTAAATACATTGAGCAGCTTGGGCGGTATAAAAAGCTGTTATACAGAGTTGTTTTCCCTCTCGAGCTGAAGCTTAGCAACACAATGGAGGATGCGGATTCTGAGTACTCTTTGTTTGCTGTCGTGGTCCATGTTGGAAGTGGACCCAACCACGGACACTACGTTAGCCTTGTGAAAAGCCATAACCACTGGTTATTTTTTGATGACGAAAATGTGGAAATGATTGACGAGTCTGTTGTGCAGACATTCTTTGGATCTGCACAAGAATATTCTAGCAATACTGATCATGGGTACATCCTATTCTACGAGAGTATTGGCGCCGGCAACAAGAGCTGA

Homology

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BLAST of CmoCh04G008840 vs. Swiss-Prot
Match: UBP4_ARATH (Ubiquitin carboxyl-terminal hydrolase 4 OS=Arabidopsis thaliana GN=UBP4 PE=1 SV=2)

HSP 1 Score: 570.5 bits (1469), Expect = 1.5e-161
Identity = 303/407 (74.45%), Postives = 326/407 (80.10%), Query Frame = 1


Query: 1   MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ-----------LLDYYSNNKS 60
           MGA GSKLEKALGDQFPEGERYFG ENFGNTCYCNSVLQ           LL++Y+NNK+
Sbjct: 1   MGAAGSKLEKALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKA 60

Query: 61  SGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFL 120
             DAEENLLTCLADLF+QISSQKKKTGVIAPKRFVQRLKKQNE+FRSYMHQDAHEFLN+L
Sbjct: 61  --DAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYL 120

Query: 121 LNELVDILEKEAHATKSDAESSSPSEKIANGPKTGQANGSQKEPLVTWVHKNFQPIGMWT 180
           LNELV+ILEKE  ATK+D E+SS  EKIAN           K PL   VHK  +PI  W 
Sbjct: 121 LNELVEILEKETQATKADNETSSSPEKIAN---------VLKAPLANGVHK--EPIVTWV 180

Query: 181 RSVLLTQASDSIKDLILNTETWPSPIELYFAHHAKLGLLTNETRCLRCETVTARDETFLD 240
             +                                 G+LTNETRCLRCETVTARDETFLD
Sbjct: 181 HKIFQ-------------------------------GILTNETRCLRCETVTARDETFLD 240

Query: 241 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300
           LSLDIEQNSSITSCLKNFSSTETL+AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR
Sbjct: 241 LSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300

Query: 301 FKYIEQLGRYKKLLYRVVFPLELKLSNTMED-ADSEYSLFAVVVHVGSGPNHGHYVSLVK 360
           FKY+EQLGRYKKL YRVVFPLELKLSNT+++  D EYSLFAVVVHVGSGPNHGHYVSLVK
Sbjct: 301 FKYMEQLGRYKKLSYRVVFPLELKLSNTVDEYVDIEYSLFAVVVHVGSGPNHGHYVSLVK 360

Query: 361 SHNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYESIG 396
           SHNHWLFFDDE+VE+I+ES VQTFFGS+QEYSSNTDHGYIL YES+G
Sbjct: 361 SHNHWLFFDDESVEIIEESAVQTFFGSSQEYSSNTDHGYILLYESLG 363

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BLAST of CmoCh04G008840 vs. Swiss-Prot
Match: UBP3_ARATH (Ubiquitin carboxyl-terminal hydrolase 3 OS=Arabidopsis thaliana GN=UBP3 PE=1 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 1.3e-157
Identity = 297/407 (72.97%), Postives = 318/407 (78.13%), Query Frame = 1


Query: 1   MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ-----------LLDYYSNNKS 60
           MGA GSKLEKALGDQFPEGERYFG ENFGNTCYCNSVLQ           LL+YY++NKS
Sbjct: 1   MGAAGSKLEKALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKS 60

Query: 61  SGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFL 120
             DAEENL+TCLADLF+QISSQKKKTGVIAPKRFVQRLKKQNE+FRSYMHQDAHEFLN+L
Sbjct: 61  VADAEENLMTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYL 120

Query: 121 LNELVDILEKEAHATKSDAESSSPSEKIANGPKTGQANGSQKEPLVTWVHKNFQPIGMWT 180
           LNE+VDIL                 EK A   KT     S   P                
Sbjct: 121 LNEVVDIL-----------------EKEAKATKTEHETSSSSSP---------------- 180

Query: 181 RSVLLTQASDSIKDLILNTETWPSPIELYFAHHAKLGLLTNETRCLRCETVTARDETFLD 240
                 + ++ +K    N      PI + + H+   G+LTNETRCLRCETVTARDETFLD
Sbjct: 181 -----EKIANGLKVPQANGVVHKEPI-VTWVHNIFQGILTNETRCLRCETVTARDETFLD 240

Query: 241 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300
           LSLDIEQNSSITSCLKNFSSTETL+AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR
Sbjct: 241 LSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300

Query: 301 FKYIEQLGRYKKLLYRVVFPLELKLSNTMED-ADSEYSLFAVVVHVGSGPNHGHYVSLVK 360
           FKYIEQLGRYKKL YRVVFPLELKLSNT+E  AD EYSLFAVVVHVGSGPNHGHYVSLVK
Sbjct: 301 FKYIEQLGRYKKLSYRVVFPLELKLSNTVEPYADVEYSLFAVVVHVGSGPNHGHYVSLVK 360

Query: 361 SHNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYESIG 396
           SHNHWLFFDDENVEMI+ES VQTFFGS+QEYSSNTDHGYILFYES+G
Sbjct: 361 SHNHWLFFDDENVEMIEESAVQTFFGSSQEYSSNTDHGYILFYESLG 368

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BLAST of CmoCh04G008840 vs. Swiss-Prot
Match: UBP46_CAEEL (Ubiquitin carboxyl-terminal hydrolase 46 OS=Caenorhabditis elegans GN=usp-46 PE=1 SV=3)

HSP 1 Score: 330.5 bits (846), Expect = 2.6e-89
Identity = 192/433 (44.34%), Postives = 260/433 (60.05%), Query Frame = 1


Query: 1   MGATGS-KLEKALGDQFP---EGERYFGLENFGNTCYCNSVLQ-----------LLDYYS 60
           MGATGS +LEK +          E Y+GL NFGNTCYCNSV+Q           +L+Y  
Sbjct: 1   MGATGSSQLEKEISTTESVNNANEHYYGLVNFGNTCYCNSVIQALFFCRPFREKVLNYKQ 60

Query: 61  NNKSSGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEF 120
             K SG +++NL+TCLADLF  I+SQK++ G IAPKRF+ +LKK+NE+F +YM QDAHEF
Sbjct: 61  TLKKSGASKDNLVTCLADLFHSIASQKRRVGTIAPKRFITKLKKENELFDNYMQQDAHEF 120

Query: 121 LNFLLNELVDILEKEAHATKSDAESSSPSEK----------IANGPKTGQANGSQKEPLV 180
            N+L+N + + L +E  A +  A      +K           A  P++ +   S++   +
Sbjct: 121 FNYLINTISETLIQEKIAEREKASRHGTLKKGNVTVNLAPATAGLPRSDEKGTSERNGGI 180

Query: 181 TWVHKNFQPIGMWTRSVLLTQASDSIKDLILNTETWPSPIELYFAHHAKLGLLTNETRCL 240
           T     F               SD        T TW         H    G+LTNETRCL
Sbjct: 181 TVEGNEF------------LNKSD--------TTTW--------IHEIFQGILTNETRCL 240

Query: 241 RCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMK 300
            CETV+++DE FLDLS+D+EQN+SI+ CL+ FS TETL  + K+FC+ C S QEAQKRM+
Sbjct: 241 SCETVSSKDEDFLDLSIDVEQNTSISHCLRVFSETETLCGDQKYFCETCSSKQEAQKRMR 300

Query: 301 IKKPPHILVIHLKRFKYIEQLGRYKKLLYRVVFPLELKLSNTMEDA---DSEYSLFAVVV 360
           IKKPP +L +HLKRFK++E L R+ KL YRVVFPLEL+L N  +DA   D  Y L A VV
Sbjct: 301 IKKPPQLLALHLKRFKFVEPLNRHTKLSYRVVFPLELRLFNVSDDAEYGDRMYDLVATVV 360

Query: 361 HVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESVVQTFFGSAQEYS------------ 394
           H G+ PN GHY++LVKS++ WL FDD+ VE ++ S ++ F G + + +            
Sbjct: 361 HCGATPNRGHYITLVKSNSFWLVFDDDIVEKLEVSSMEEFSGMSTDANIQMPPGNQSAPQ 405

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BLAST of CmoCh04G008840 vs. Swiss-Prot
Match: UBP46_RAT (Ubiquitin carboxyl-terminal hydrolase 46 OS=Rattus norvegicus GN=Usp46 PE=1 SV=2)

HSP 1 Score: 283.5 bits (724), Expect = 3.6e-75
Identity = 174/402 (43.28%), Postives = 227/402 (56.47%), Query Frame = 1


Query: 1   MGATGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQLLDYYSNNKSSGDAEENLLT 60
           MG   S LEK +G +QFP  E YFGL NFGNTCYCNSVLQ L +                
Sbjct: 12  MGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYF---------------- 71

Query: 61  CLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFLLNELVDILEK 120
                      +  +  V+A K   Q+ KK+N                 LL  L D+   
Sbjct: 72  ----------CRPFRENVLAYK--AQQKKKEN-----------------LLTCLADLFH- 131

Query: 121 EAHATKSDAESSSPSEKIANGPKTGQANGSQKEPLVTWVHKNFQPIGMWTRSVLLTQASD 180
            + AT+       P +K  +  +  + N      +    H+    +      +L  +   
Sbjct: 132 -SIATQKKKVGVIPPKKFIS--RLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQ 191

Query: 181 S-----IKDLILNTETWPSPIELYFAHHAKLGLLTNETRCLRCETVTARDETFLDLSLDI 240
                 +K+  +N     S  EL + H    G LTNETRCL CETV+++DE FLDLS+D+
Sbjct: 192 EKQNGKLKNGNMNEPAENSKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDV 251

Query: 241 EQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIE 300
           EQN+SIT CL++FS+TETL +E K++C+ CCS QEAQKRM++KK P IL +HLKRFKY+E
Sbjct: 252 EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYME 311

Query: 301 QLGRYKKLLYRVVFPLELKLSNTMEDA---DSEYSLFAVVVHVGSGPNHGHYVSLVKSHN 360
           QL RY KL YRVVFPLEL+L NT  DA   D  Y L AVVVH GSGPN GHY+++VKSH 
Sbjct: 312 QLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSHG 364

Query: 361 HWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYES 394
            WL FDD+ VE ID   ++ F+G   + S N++ GYILFY+S
Sbjct: 372 FWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQS 364

[Close]

BLAST of CmoCh04G008840 vs. Swiss-Prot
Match: UBP46_DANRE (Ubiquitin carboxyl-terminal hydrolase 46 OS=Danio rerio GN=usp46 PE=3 SV=2)

HSP 1 Score: 277.3 bits (708), Expect = 2.6e-73
Identity = 179/405 (44.20%), Postives = 229/405 (56.54%), Query Frame = 1


Query: 1   MGATGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQLLDY---YSNN----KSSGD 60
           MG   S LEK +G +QFP  E YFGL NFGNTCYCNSVLQ L +   +  N    K    
Sbjct: 12  MGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKVQQK 71

Query: 61  AEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFLLNE 120
            +ENLLTCLADLF  I++QKKK GVI PK+F+ RL+K+N++F +YM QDAHEFLN+LLN 
Sbjct: 72  KKENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 131

Query: 121 LVDILEKEAHATKSDAESSSPSEKIANGPKTGQANGSQKEPLVTWVHKNFQPIGMWTRSV 180
           + DIL++E    K +    +    IA   +  Q   ++ +P  TWVH+ FQ  G  T   
Sbjct: 132 VADILQEERKQEKQNGRLKNNGTAIATDTEPEQ---NKIDP--TWVHEIFQ--GTLTN-- 191

Query: 181 LLTQASDSIKDLILNTETWPSPIELYFAHHAKLGLLTNETRCLRCETVTARDETFLDLSL 240
                    +   LN ET  S  E +      +   T+ T CLR                
Sbjct: 192 ---------ETRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLR---------------- 251

Query: 241 DIEQNSSITSCLKNFSSTETLNAE-DKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFK 300
                        +FS+TETL +E   +    C   +  ++    K P  IL +HLKRFK
Sbjct: 252 -------------DFSNTETLCSEYKYYCEMCCSKQEAQKRMRVKKLPM-ILALHLKRFK 311

Query: 301 YIEQLGRYKKLLYRVVFPLELKLSNTMEDA---DSEYSLFAVVVHVGSGPNHGHYVSLVK 360
           Y+EQL RY KL YRVVFPLEL+L NT  DA   D  Y L AVVVH GSGPN GHY+++VK
Sbjct: 312 YMEQLHRYTKLSYRVVFPLELRLFNTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVK 368

Query: 361 SHNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYES 394
           SH  WL FDD+ VE ID   ++ F+G   + S N++ GYILFY+S
Sbjct: 372 SHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQS 368

[Close]

BLAST of CmoCh04G008840 vs. TrEMBL
Match: A0A0A0KXS5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G095590 PE=3 SV=1)

HSP 1 Score: 642.5 bits (1656), Expect = 3.4e-181
Identity = 340/411 (82.73%), Postives = 346/411 (84.18%), Query Frame = 1


Query: 1   MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ-----------LLDYYSNNKS 60
           MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ           LLDYYSNNKS
Sbjct: 1   MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKS 60

Query: 61  SGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFL 120
            GDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFL
Sbjct: 61  IGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFL 120

Query: 121 LNELVDILEKEAHATKSDAESSSPSEKIANGPKTGQANGSQKEPLVTWVHKNFQPIGMWT 180
           LNELVDILEKEAHA KSDAESSSP EKI+NGPKTG                         
Sbjct: 121 LNELVDILEKEAHAIKSDAESSSPPEKISNGPKTG------------------------- 180

Query: 181 RSVLLTQASDSIKDLILNTETWPSPIELYFAHHAKLGLLTNETRCLRCETVTARDETFLD 240
                 QA+ + K+ ++   TW         H    GLLTNETRCLRCETVTARDETFLD
Sbjct: 181 ------QANGAQKEPLV---TW--------VHKNFQGLLTNETRCLRCETVTARDETFLD 240

Query: 241 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300
           LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR
Sbjct: 241 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300

Query: 301 FKYIEQLGRYKKLLYRVVFPLELKLSNTMEDADSEYSLFAVVVHVGSGPNHGHYVSLVKS 360
           FKYIEQLGRYKKLLYRVVFPLELKLSNTMEDADSEYSLFAVVVHVGSGPNHGHYVSLVKS
Sbjct: 301 FKYIEQLGRYKKLLYRVVFPLELKLSNTMEDADSEYSLFAVVVHVGSGPNHGHYVSLVKS 360

Query: 361 HNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYESIGAGNKS 401
           HNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYESIG GNKS
Sbjct: 361 HNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYESIGTGNKS 369

[Close]

BLAST of CmoCh04G008840 vs. TrEMBL
Match: M5VYQ9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007401mg PE=3 SV=1)

HSP 1 Score: 615.9 bits (1587), Expect = 3.4e-173
Identity = 324/411 (78.83%), Postives = 337/411 (82.00%), Query Frame = 1


Query: 1   MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ-----------LLDYYSNNKS 60
           MGA GSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ           LL+YYS+NKS
Sbjct: 1   MGAAGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYSSNKS 60

Query: 61  SGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFL 120
           +GDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNE+FRSYMHQDAHEFLNFL
Sbjct: 61  TGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120

Query: 121 LNELVDILEKEAHATKSDAESSSPSEKIANGPKTGQANGSQKEPLVTWVHKNFQPIGMWT 180
           LNELVDILEKEA A KSD E+SSP EK+ NGPK  QA                       
Sbjct: 121 LNELVDILEKEAQAAKSDQETSSPPEKMVNGPKNAQA----------------------- 180

Query: 181 RSVLLTQASDSIKDLILNTETWPSPIELYFAHHAKLGLLTNETRCLRCETVTARDETFLD 240
                   + S KD ++   TW         H    G+LTNETRCLRCETVTARDETF D
Sbjct: 181 --------NGSHKDPLV---TW--------VHKNFQGILTNETRCLRCETVTARDETFFD 240

Query: 241 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300
           LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR
Sbjct: 241 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300

Query: 301 FKYIEQLGRYKKLLYRVVFPLELKLSNTMEDADSEYSLFAVVVHVGSGPNHGHYVSLVKS 360
           FKYIEQLGRYKKL YRVVFPLELKLSNT+EDA+SEYSLFAVVVHVGSGPNHGHYVSLVKS
Sbjct: 301 FKYIEQLGRYKKLSYRVVFPLELKLSNTVEDAESEYSLFAVVVHVGSGPNHGHYVSLVKS 360

Query: 361 HNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYESIGAGNKS 401
           HNHWLFFDDENVEMIDES VQTFFGSAQEYSSNTDHGYILFYES+G  NKS
Sbjct: 361 HNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFYESLGTSNKS 369

[Close]

BLAST of CmoCh04G008840 vs. TrEMBL
Match: A0A067LEL9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24031 PE=3 SV=1)

HSP 1 Score: 610.1 bits (1572), Expect = 1.9e-171
Identity = 322/411 (78.35%), Postives = 336/411 (81.75%), Query Frame = 1


Query: 1   MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ-----------LLDYYSNNKS 60
           MGA GSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ           LL+YY+NNKS
Sbjct: 1   MGAAGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKS 60

Query: 61  SGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFL 120
           +GDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNE+FRSYMHQDAHEFLNFL
Sbjct: 61  TGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120

Query: 121 LNELVDILEKEAHATKSDAESSSPSEKIANGPKTGQANGSQKEPLVTWVHKNFQPIGMWT 180
           LNELVDILEKEA   KSD ESSS SEK+ANGPK                           
Sbjct: 121 LNELVDILEKEAQVAKSDLESSSTSEKVANGPKHA------------------------- 180

Query: 181 RSVLLTQASDSIKDLILNTETWPSPIELYFAHHAKLGLLTNETRCLRCETVTARDETFLD 240
                 QA+   K+ ++   TW         H    G+LTNETRCL+CETVTARDETF D
Sbjct: 181 ------QANGLSKEPLV---TW--------VHKNFQGILTNETRCLQCETVTARDETFFD 240

Query: 241 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300
           LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR
Sbjct: 241 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300

Query: 301 FKYIEQLGRYKKLLYRVVFPLELKLSNTMEDADSEYSLFAVVVHVGSGPNHGHYVSLVKS 360
           FKYIEQLGRYKKL YRVVFPLELKLSNT+EDAD EYSLFAVVVHVGSGPNHGHYVSLVKS
Sbjct: 301 FKYIEQLGRYKKLSYRVVFPLELKLSNTVEDADIEYSLFAVVVHVGSGPNHGHYVSLVKS 360

Query: 361 HNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYESIGAGNKS 401
           HNHWLFFDDENVEMIDES VQTFFGSAQEYSSNTDHGYILFYES+GA +KS
Sbjct: 361 HNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFYESLGATSKS 369

[Close]

BLAST of CmoCh04G008840 vs. TrEMBL
Match: B9H4T4_POPTR (UBIQUITIN-SPECIFIC PROTEASE 4 family protein OS=Populus trichocarpa GN=POPTR_0005s07640g PE=3 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 7.1e-171
Identity = 322/409 (78.73%), Postives = 332/409 (81.17%), Query Frame = 1


Query: 1   MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ-----------LLDYYSNNKS 60
           MGA GSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ           LL+YY N KS
Sbjct: 1   MGAAGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREHLLEYYGNGKS 60

Query: 61  SGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFL 120
            GDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNE+FRSYMHQDAHEFLNFL
Sbjct: 61  IGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120

Query: 121 LNELVDILEKEAHATKSDAESSSPSEKIANGPKTGQANGSQKEPLVTWVHKNFQPIGMWT 180
           LNELVDILEKEA A KSD E+SSP EKIANGPK                           
Sbjct: 121 LNELVDILEKEAQAVKSDPETSSPPEKIANGPKHA------------------------- 180

Query: 181 RSVLLTQASDSIKDLILNTETWPSPIELYFAHHAKLGLLTNETRCLRCETVTARDETFLD 240
                 QA+   K+ ++   TW         H    G+LTNETRCL+CETVTARDETF D
Sbjct: 181 ------QANGVSKEPLV---TW--------VHKNFQGILTNETRCLQCETVTARDETFFD 240

Query: 241 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300
           LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR
Sbjct: 241 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300

Query: 301 FKYIEQLGRYKKLLYRVVFPLELKLSNTMEDADSEYSLFAVVVHVGSGPNHGHYVSLVKS 360
           FKYIEQLGRYKKL YRVVFPLELKLSNT+EDAD EYSLFAVVVHVGSGPNHGHYVSLVKS
Sbjct: 301 FKYIEQLGRYKKLSYRVVFPLELKLSNTVEDADIEYSLFAVVVHVGSGPNHGHYVSLVKS 360

Query: 361 HNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYESIGAGN 399
           HNHWLFFDDENVEMIDES VQTFFGSAQEYSSNTDHGYILFYESIGA N
Sbjct: 361 HNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFYESIGASN 367

[Close]

BLAST of CmoCh04G008840 vs. TrEMBL
Match: B9SZ50_RICCO (Ubiquitin carboxyl-terminal hydrolase, putative OS=Ricinus communis GN=RCOM_0213470 PE=3 SV=1)

HSP 1 Score: 607.8 bits (1566), Expect = 9.3e-171
Identity = 320/411 (77.86%), Postives = 334/411 (81.27%), Query Frame = 1


Query: 1   MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ-----------LLDYYSNNKS 60
           MGA GSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ           LL+YY+NNKS
Sbjct: 1   MGAAGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKS 60

Query: 61  SGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFL 120
            GDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNE+FRSYMHQDAHEFLNFL
Sbjct: 61  GGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120

Query: 121 LNELVDILEKEAHATKSDAESSSPSEKIANGPKTGQANGSQKEPLVTWVHKNFQPIGMWT 180
           LNELVDILEKEA A KSD E+SS  EKI NGPK G                         
Sbjct: 121 LNELVDILEKEAQAAKSDPETSSSPEKIPNGPKNG------------------------- 180

Query: 181 RSVLLTQASDSIKDLILNTETWPSPIELYFAHHAKLGLLTNETRCLRCETVTARDETFLD 240
                 QA+   K+ ++   TW         H    G+LTNETRCL+CETVTARDETF D
Sbjct: 181 ------QANGVSKEPLV---TW--------VHKNFQGILTNETRCLQCETVTARDETFFD 240

Query: 241 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300
           LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR
Sbjct: 241 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300

Query: 301 FKYIEQLGRYKKLLYRVVFPLELKLSNTMEDADSEYSLFAVVVHVGSGPNHGHYVSLVKS 360
           FKYIEQL RYKKL YRVVFPLELKLSNT+ED+D EYSLFAVVVHVGSGPNHGHYVSLVKS
Sbjct: 301 FKYIEQLSRYKKLSYRVVFPLELKLSNTVEDSDIEYSLFAVVVHVGSGPNHGHYVSLVKS 360

Query: 361 HNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYESIGAGNKS 401
           HNHWLFFDDENVEMIDES VQTFFGS+QEYSSNTDHGYILFYES+GA NKS
Sbjct: 361 HNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFYESLGASNKS 369

[Close]

BLAST of CmoCh04G008840 vs. TAIR10
Match: AT2G22310.2 (AT2G22310.2 ubiquitin-specific protease 4)

HSP 1 Score: 565.1 bits (1455), Expect = 3.5e-161
Identity = 303/421 (71.97%), Postives = 326/421 (77.43%), Query Frame = 1


Query: 1   MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ--------------------- 60
           MGA GSKLEKALGDQFPEGERYFG ENFGNTCYCNSVLQ                     
Sbjct: 1   MGAAGSKLEKALGDQFPEGERYFGFENFGNTCYCNSVLQDWVVDLRSVLHSMFALYFCAP 60

Query: 61  ----LLDYYSNNKSSGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFR 120
               LL++Y+NNK+  DAEENLLTCLADLF+QISSQKKKTGVIAPKRFVQRLKKQNE+FR
Sbjct: 61  FREQLLEHYANNKA--DAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFR 120

Query: 121 SYMHQDAHEFLNFLLNELVDILEKEAHATKSDAESSSPSEKIANGPKTGQANGSQKEPLV 180
           SYMHQDAHEFLN+LLNELV+ILEKE  ATK+D E+SS  EKIAN           K PL 
Sbjct: 121 SYMHQDAHEFLNYLLNELVEILEKETQATKADNETSSSPEKIAN---------VLKAPLA 180

Query: 181 TWVHKNFQPIGMWTRSVLLTQASDSIKDLILNTETWPSPIELYFAHHAKLGLLTNETRCL 240
             VHK  +PI  W   +                                 G+LTNETRCL
Sbjct: 181 NGVHK--EPIVTWVHKIFQ-------------------------------GILTNETRCL 240

Query: 241 RCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMK 300
           RCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETL+AEDKFFCDKCCSLQEAQKRMK
Sbjct: 241 RCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMK 300

Query: 301 IKKPPHILVIHLKRFKYIEQLGRYKKLLYRVVFPLELKLSNTMED-ADSEYSLFAVVVHV 360
           IKKPPHILVIHLKRFKY+EQLGRYKKL YRVVFPLELKLSNT+++  D EYSLFAVVVHV
Sbjct: 301 IKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVDEYVDIEYSLFAVVVHV 360

Query: 361 GSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYESI 396
           GSGPNHGHYVSLVKSHNHWLFFDDE+VE+I+ES VQTFFGS+QEYSSNTDHGYIL YES+
Sbjct: 361 GSGPNHGHYVSLVKSHNHWLFFDDESVEIIEESAVQTFFGSSQEYSSNTDHGYILLYESL 377

[Close]

BLAST of CmoCh04G008840 vs. TAIR10
Match: AT4G39910.1 (AT4G39910.1 ubiquitin-specific protease 3)

HSP 1 Score: 557.4 bits (1435), Expect = 7.3e-159
Identity = 297/407 (72.97%), Postives = 318/407 (78.13%), Query Frame = 1


Query: 1   MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ-----------LLDYYSNNKS 60
           MGA GSKLEKALGDQFPEGERYFG ENFGNTCYCNSVLQ           LL+YY++NKS
Sbjct: 1   MGAAGSKLEKALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKS 60

Query: 61  SGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFL 120
             DAEENL+TCLADLF+QISSQKKKTGVIAPKRFVQRLKKQNE+FRSYMHQDAHEFLN+L
Sbjct: 61  VADAEENLMTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYL 120

Query: 121 LNELVDILEKEAHATKSDAESSSPSEKIANGPKTGQANGSQKEPLVTWVHKNFQPIGMWT 180
           LNE+VDIL                 EK A   KT     S   P                
Sbjct: 121 LNEVVDIL-----------------EKEAKATKTEHETSSSSSP---------------- 180

Query: 181 RSVLLTQASDSIKDLILNTETWPSPIELYFAHHAKLGLLTNETRCLRCETVTARDETFLD 240
                 + ++ +K    N      PI + + H+   G+LTNETRCLRCETVTARDETFLD
Sbjct: 181 -----EKIANGLKVPQANGVVHKEPI-VTWVHNIFQGILTNETRCLRCETVTARDETFLD 240

Query: 241 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300
           LSLDIEQNSSITSCLKNFSSTETL+AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR
Sbjct: 241 LSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300

Query: 301 FKYIEQLGRYKKLLYRVVFPLELKLSNTMED-ADSEYSLFAVVVHVGSGPNHGHYVSLVK 360
           FKYIEQLGRYKKL YRVVFPLELKLSNT+E  AD EYSLFAVVVHVGSGPNHGHYVSLVK
Sbjct: 301 FKYIEQLGRYKKLSYRVVFPLELKLSNTVEPYADVEYSLFAVVVHVGSGPNHGHYVSLVK 360

Query: 361 SHNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYESIG 396
           SHNHWLFFDDENVEMI+ES VQTFFGS+QEYSSNTDHGYILFYES+G
Sbjct: 361 SHNHWLFFDDENVEMIEESAVQTFFGSSQEYSSNTDHGYILFYESLG 368

[Close]

BLAST of CmoCh04G008840 vs. TAIR10
Match: AT3G14400.1 (AT3G14400.1 ubiquitin-specific protease 25)

HSP 1 Score: 95.1 bits (235), Expect = 1.0e-19
Identity = 59/180 (32.78%), Postives = 93/180 (51.67%), Query Frame = 1


Query: 206 GLLTNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCC 265
           G L ++ +CL C   + + +  +D+SL+I Q+SS+   L+ F  +E L+  +K+ C+ C 
Sbjct: 158 GALQSQVKCLSCGAESNKADEIMDISLEILQSSSVKESLQKFFQSEILDGNNKYRCESCE 217

Query: 266 SLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLLYRVVFPLELKLSNTMEDADSEY 325
            L  A+K+M I + P+ILVI LKRF  I      K + +  +  L   +S   +D   EY
Sbjct: 218 KLVTARKQMSILQAPNILVIQLKRFGGIFGGKIDKAISFGEILVLSNFMSKASKDPQPEY 277

Query: 326 SLFAVVVHVGSGPNHGHYVSLVK-SHNHWLFFDDENV------EMIDESVVQTFFGSAQE 379
            LF ++VH G  P  GHY + VK S   W   +D  V      E++ E     FF  + +
Sbjct: 278 KLFGIIVHSGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFFSRSNQ 337

[Close]

BLAST of CmoCh04G008840 vs. TAIR10
Match: AT4G24560.1 (AT4G24560.1 ubiquitin-specific protease 16)

HSP 1 Score: 95.1 bits (235), Expect = 1.0e-19
Identity = 56/172 (32.56%), Postives = 97/172 (56.40%), Query Frame = 1


Query: 206 GLLTNETRCLRCETVTARDETFLDLSLDIEQN-SSITSCLKNFSSTETLNAEDKFFCDKC 265
           G L ++ +C++C+  +   E  +DL+++I+ + S++   L+ F+ TE L+ E+K+ C  C
Sbjct: 669 GYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDALRRFTRTEILDGENKYRCGSC 728

Query: 266 CSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLLYRVVFPLELKLSNTM---EDA 325
            S + A+K++KI +PP++L I LKRF    Q G++ KL   + FP  L L+  +    + 
Sbjct: 729 KSYERAKKKLKITEPPNVLTIALKRF----QAGKFGKLNKLIRFPETLDLAPYVSGGSEK 788

Query: 326 DSEYSLFAVVVH--VGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESVVQT 372
             +Y L+ V+VH  V +    GHYV  +++ N W   DD  V   D   + T
Sbjct: 789 SHDYKLYGVIVHLDVMNAAFSGHYVCYIRNQNKWYKADDSTVVTSDVERILT 836

[Close]

BLAST of CmoCh04G008840 vs. TAIR10
Match: AT4G31670.1 (AT4G31670.1 ubiquitin-specific protease 18)

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-18
Identity = 64/203 (31.53%), Postives = 105/203 (51.72%), Query Frame = 1


Query: 206 GLLTNETRCLRCETVTARDETFLDLSLDIEQNS-SITSCLKNFSSTETLNAEDKFFCDKC 265
           GLL ++ +C  C  V+ + E  +DL +++  ++ S+  CL  F++ E L+ ++ + CD+C
Sbjct: 295 GLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAGSLEECLDQFTAEEWLHGDNMYKCDRC 354

Query: 266 CSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLLYRVVFPLELKLSNTME---DA 325
               +A KR+ I++ P+IL I LKR+    Q GRY KL  R+ FP  L L+  M    D 
Sbjct: 355 SDYVKACKRLTIRRAPNILTIALKRY----QGGRYGKLNKRISFPETLDLNPYMSEGGDG 414

Query: 326 DSEYSLFAVVVHVG--SGPNHGHYVSLVKSH-NHWLFFDDENVEMID-ESVVQTFFGSAQ 385
              Y L+AV+VH+   +    GHY+  +K    +W   DD  +E ++ E V+        
Sbjct: 415 SDVYKLYAVIVHLDMLNASFFGHYICYIKDFCGNWYRIDDSEIESVELEDVL-------- 474

Query: 386 EYSSNTDHGYILFYESIGAGNKS 401
                +   Y+L Y  I A + S
Sbjct: 475 -----SQRAYMLLYSRIQARSSS 480

[Close]

BLAST of CmoCh04G008840 vs. NCBI nr
Match: gi|449438831|ref|XP_004137191.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 642.5 bits (1656), Expect = 4.9e-181
Identity = 340/411 (82.73%), Postives = 346/411 (84.18%), Query Frame = 1


Query: 1   MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ-----------LLDYYSNNKS 60
           MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ           LLDYYSNNKS
Sbjct: 1   MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKS 60

Query: 61  SGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFL 120
            GDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFL
Sbjct: 61  IGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFL 120

Query: 121 LNELVDILEKEAHATKSDAESSSPSEKIANGPKTGQANGSQKEPLVTWVHKNFQPIGMWT 180
           LNELVDILEKEAHA KSDAESSSP EKI+NGPKTG                         
Sbjct: 121 LNELVDILEKEAHAIKSDAESSSPPEKISNGPKTG------------------------- 180

Query: 181 RSVLLTQASDSIKDLILNTETWPSPIELYFAHHAKLGLLTNETRCLRCETVTARDETFLD 240
                 QA+ + K+ ++   TW         H    GLLTNETRCLRCETVTARDETFLD
Sbjct: 181 ------QANGAQKEPLV---TW--------VHKNFQGLLTNETRCLRCETVTARDETFLD 240

Query: 241 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300
           LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR
Sbjct: 241 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300

Query: 301 FKYIEQLGRYKKLLYRVVFPLELKLSNTMEDADSEYSLFAVVVHVGSGPNHGHYVSLVKS 360
           FKYIEQLGRYKKLLYRVVFPLELKLSNTMEDADSEYSLFAVVVHVGSGPNHGHYVSLVKS
Sbjct: 301 FKYIEQLGRYKKLLYRVVFPLELKLSNTMEDADSEYSLFAVVVHVGSGPNHGHYVSLVKS 360

Query: 361 HNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYESIGAGNKS 401
           HNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYESIG GNKS
Sbjct: 361 HNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYESIGTGNKS 369

[Close]

BLAST of CmoCh04G008840 vs. NCBI nr
Match: gi|659111136|ref|XP_008455597.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform X2 [Cucumis melo])

HSP 1 Score: 642.5 bits (1656), Expect = 4.9e-181
Identity = 340/411 (82.73%), Postives = 347/411 (84.43%), Query Frame = 1


Query: 1   MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ-----------LLDYYSNNKS 60
           MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ           LLDYYSN+KS
Sbjct: 1   MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNSKS 60

Query: 61  SGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFL 120
            GDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFL
Sbjct: 61  IGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFL 120

Query: 121 LNELVDILEKEAHATKSDAESSSPSEKIANGPKTGQANGSQKEPLVTWVHKNFQPIGMWT 180
           LNELVDILEKEAHA KSDAESSSPSEKI+NGPKTG                         
Sbjct: 121 LNELVDILEKEAHAIKSDAESSSPSEKISNGPKTG------------------------- 180

Query: 181 RSVLLTQASDSIKDLILNTETWPSPIELYFAHHAKLGLLTNETRCLRCETVTARDETFLD 240
                 QA+ + K+ ++   TW         H    GLLTNETRCLRCETVTARDETFLD
Sbjct: 181 ------QANGAQKEPLV---TW--------VHKNFQGLLTNETRCLRCETVTARDETFLD 240

Query: 241 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300
           LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR
Sbjct: 241 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300

Query: 301 FKYIEQLGRYKKLLYRVVFPLELKLSNTMEDADSEYSLFAVVVHVGSGPNHGHYVSLVKS 360
           FKYIEQLGRYKKLLYRVVFPLELKLSNTMEDADSEYSLFAVVVHVGSGPNHGHYVSLVKS
Sbjct: 301 FKYIEQLGRYKKLLYRVVFPLELKLSNTMEDADSEYSLFAVVVHVGSGPNHGHYVSLVKS 360

Query: 361 HNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYESIGAGNKS 401
           HNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYESIG GNKS
Sbjct: 361 HNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYESIGTGNKS 369

[Close]

BLAST of CmoCh04G008840 vs. NCBI nr
Match: gi|659111134|ref|XP_008455596.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform X1 [Cucumis melo])

HSP 1 Score: 634.4 bits (1635), Expect = 1.3e-178
Identity = 340/432 (78.70%), Postives = 347/432 (80.32%), Query Frame = 1


Query: 1   MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQL-------------------- 60
           MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQL                    
Sbjct: 1   MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQLSSESTLIFVVLGFGRRIETV 60

Query: 61  ------------LDYYSNNKSSGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLK 120
                       LDYYSN+KS GDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLK
Sbjct: 61  ALYFCVPFREQLLDYYSNSKSIGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLK 120

Query: 121 KQNEIFRSYMHQDAHEFLNFLLNELVDILEKEAHATKSDAESSSPSEKIANGPKTGQANG 180
           KQNEIFRSYMHQDAHEFLNFLLNELVDILEKEAHA KSDAESSSPSEKI+NGPKTG    
Sbjct: 121 KQNEIFRSYMHQDAHEFLNFLLNELVDILEKEAHAIKSDAESSSPSEKISNGPKTG---- 180

Query: 181 SQKEPLVTWVHKNFQPIGMWTRSVLLTQASDSIKDLILNTETWPSPIELYFAHHAKLGLL 240
                                      QA+ + K+ ++   TW         H    GLL
Sbjct: 181 ---------------------------QANGAQKEPLV---TW--------VHKNFQGLL 240

Query: 241 TNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQ 300
           TNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQ
Sbjct: 241 TNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQ 300

Query: 301 EAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLLYRVVFPLELKLSNTMEDADSEYSLF 360
           EAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLLYRVVFPLELKLSNTMEDADSEYSLF
Sbjct: 301 EAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLLYRVVFPLELKLSNTMEDADSEYSLF 360

Query: 361 AVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYI 401
           AVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYI
Sbjct: 361 AVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYI 390

[Close]

BLAST of CmoCh04G008840 vs. NCBI nr
Match: gi|470103536|ref|XP_004288192.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Fragaria vesca subsp. vesca])

HSP 1 Score: 617.5 bits (1591), Expect = 1.7e-173
Identity = 324/411 (78.83%), Postives = 338/411 (82.24%), Query Frame = 1


Query: 1   MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ-----------LLDYYSNNKS 60
           MGA GSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ           LL+YYSN+K+
Sbjct: 1   MGAAGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYSNSKN 60

Query: 61  SGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFL 120
            GDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNE+FRSYMHQDAHEFLNFL
Sbjct: 61  IGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120

Query: 121 LNELVDILEKEAHATKSDAESSSPSEKIANGPKTGQANGSQKEPLVTWVHKNFQPIGMWT 180
           LNELVDILEKEA A KSD E+SSP EK+ANGPK GQA                       
Sbjct: 121 LNELVDILEKEAQAAKSDQETSSPPEKLANGPKNGQA----------------------- 180

Query: 181 RSVLLTQASDSIKDLILNTETWPSPIELYFAHHAKLGLLTNETRCLRCETVTARDETFLD 240
                   + S KD ++   TW         H    G+LTNETRCLRCETVTARDETF D
Sbjct: 181 --------NGSHKDPLV---TW--------VHKNFQGILTNETRCLRCETVTARDETFFD 240

Query: 241 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300
           LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPH+LVIHLKR
Sbjct: 241 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHVLVIHLKR 300

Query: 301 FKYIEQLGRYKKLLYRVVFPLELKLSNTMEDADSEYSLFAVVVHVGSGPNHGHYVSLVKS 360
           FKYIEQLGRYKKL YRVVFPLELKLSNT+EDA+SEYSLFAVVVHVGSGPNHGHYVSLVKS
Sbjct: 301 FKYIEQLGRYKKLSYRVVFPLELKLSNTVEDAESEYSLFAVVVHVGSGPNHGHYVSLVKS 360

Query: 361 HNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYESIGAGNKS 401
           HNHWLFFDDENVEMIDES VQTFFGSAQEYSSNTDHGYILFYES+G  NKS
Sbjct: 361 HNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFYESLGTSNKS 369

[Close]

BLAST of CmoCh04G008840 vs. NCBI nr
Match: gi|595825315|ref|XP_007205388.1| (hypothetical protein PRUPE_ppa007401mg [Prunus persica])

HSP 1 Score: 615.9 bits (1587), Expect = 4.9e-173
Identity = 324/411 (78.83%), Postives = 337/411 (82.00%), Query Frame = 1


Query: 1   MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ-----------LLDYYSNNKS 60
           MGA GSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ           LL+YYS+NKS
Sbjct: 1   MGAAGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYSSNKS 60

Query: 61  SGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFL 120
           +GDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNE+FRSYMHQDAHEFLNFL
Sbjct: 61  TGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120

Query: 121 LNELVDILEKEAHATKSDAESSSPSEKIANGPKTGQANGSQKEPLVTWVHKNFQPIGMWT 180
           LNELVDILEKEA A KSD E+SSP EK+ NGPK  QA                       
Sbjct: 121 LNELVDILEKEAQAAKSDQETSSPPEKMVNGPKNAQA----------------------- 180

Query: 181 RSVLLTQASDSIKDLILNTETWPSPIELYFAHHAKLGLLTNETRCLRCETVTARDETFLD 240
                   + S KD ++   TW         H    G+LTNETRCLRCETVTARDETF D
Sbjct: 181 --------NGSHKDPLV---TW--------VHKNFQGILTNETRCLRCETVTARDETFFD 240

Query: 241 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300
           LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR
Sbjct: 241 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 300

Query: 301 FKYIEQLGRYKKLLYRVVFPLELKLSNTMEDADSEYSLFAVVVHVGSGPNHGHYVSLVKS 360
           FKYIEQLGRYKKL YRVVFPLELKLSNT+EDA+SEYSLFAVVVHVGSGPNHGHYVSLVKS
Sbjct: 301 FKYIEQLGRYKKLSYRVVFPLELKLSNTVEDAESEYSLFAVVVHVGSGPNHGHYVSLVKS 360

Query: 361 HNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGYILFYESIGAGNKS 401
           HNHWLFFDDENVEMIDES VQTFFGSAQEYSSNTDHGYILFYES+G  NKS
Sbjct: 361 HNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFYESLGTSNKS 369

The following BLAST results are available for this feature:

BLAST of CmoCh04G008840 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UBP4_ARATH	1.5e-161	74.45	Ubiquitin carboxyl-terminal hydrolase 4 OS=Arabidopsis thaliana GN=UBP4 PE=1 SV=...	[more]
UBP3_ARATH	1.3e-157	72.97	Ubiquitin carboxyl-terminal hydrolase 3 OS=Arabidopsis thaliana GN=UBP3 PE=1 SV=...	[more]
UBP46_CAEEL	2.6e-89	44.34	Ubiquitin carboxyl-terminal hydrolase 46 OS=Caenorhabditis elegans GN=usp-46 PE=...	[more]
UBP46_RAT	3.6e-75	43.28	Ubiquitin carboxyl-terminal hydrolase 46 OS=Rattus norvegicus GN=Usp46 PE=1 SV=2	[more]
UBP46_DANRE	2.6e-73	44.20	Ubiquitin carboxyl-terminal hydrolase 46 OS=Danio rerio GN=usp46 PE=3 SV=2	[more]

BLAST of CmoCh04G008840 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXS5_CUCSA	3.4e-181	82.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G095590 PE=3 SV=1	[more]
M5VYQ9_PRUPE	3.4e-173	78.83	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007401mg PE=3 SV=1	[more]
A0A067LEL9_JATCU	1.9e-171	78.35	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24031 PE=3 SV=1	[more]
B9H4T4_POPTR	7.1e-171	78.73	UBIQUITIN-SPECIFIC PROTEASE 4 family protein OS=Populus trichocarpa GN=POPTR_000...	[more]
B9SZ50_RICCO	9.3e-171	77.86	Ubiquitin carboxyl-terminal hydrolase, putative OS=Ricinus communis GN=RCOM_0213...	[more]

BLAST of CmoCh04G008840 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G22310.2	3.5e-161	71.97	ubiquitin-specific protease 4	[more]
AT4G39910.1	7.3e-159	72.97	ubiquitin-specific protease 3	[more]
AT3G14400.1	1.0e-19	32.78	ubiquitin-specific protease 25	[more]
AT4G24560.1	1.0e-19	32.56	ubiquitin-specific protease 16	[more]
AT4G31670.1	1.5e-18	31.53	ubiquitin-specific protease 18	[more]

BLAST of CmoCh04G008840 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438831\|ref\|XP_004137191.1\|	4.9e-181	82.73	PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform X1 [Cucumis sativus]	[more]
gi\|659111136\|ref\|XP_008455597.1\|	4.9e-181	82.73	PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform X2 [Cucumis melo]	[more]
gi\|659111134\|ref\|XP_008455596.1\|	1.3e-178	78.70	PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform X1 [Cucumis melo]	[more]
gi\|470103536\|ref\|XP_004288192.1\|	1.7e-173	78.83	PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Fragaria vesca subsp. vesca]	[more]
gi\|595825315\|ref\|XP_007205388.1\|	4.9e-173	78.83	hypothetical protein PRUPE_ppa007401mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001394	Peptidase_C19_UCH
IPR018200	USP_CS

Vocabulary: **Biological Process**
Term	Definition
GO:0016579	protein deubiquitination
GO:0006511	ubiquitin-dependent protein catabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0036459	thiol-dependent ubiquitinyl hydrolase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016579	protein deubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G008840.1	CmoCh04G008840.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	PFAM	PF00443	UCH	coord: 23..391 score: 6.3
IPR018200	Ubiquitin specific protease, conserved site	PROSITE	PS00972	USP_1	coord: 24..39 scor
IPR018200	Ubiquitin specific protease, conserved site	PROSITE	PS00973	USP_2	coord: 325..343 scor
None	No IPR available	GENE3D	G3DSA:2.20.210.10		coord: 211..277 score: 1.
None	No IPR available	PANTHER	PTHR24006	FAMILY NOT NAMED	coord: 208..396 score: 1.6E-233coord: 4..165 score: 1.6E
None	No IPR available	PANTHER	PTHR24006:SF469	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4	coord: 4..165 score: 1.6E-233coord: 208..396 score: 1.6E
None	No IPR available	unknown	SSF54001	Cysteine proteinases	coord: 198..393 score: 8.34E-84coord: 21..118 score: 8.34

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G008840	Cucsa.273040	Cucumber (Gy14) v1	cgycmoB0758
CmoCh04G008840	CmaCh16G007150	Cucurbita maxima (Rimu)	cmacmoB337
CmoCh04G008840	CmaCh04G008270	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G008840	Cla004834	Watermelon (97103) v1	cmowmB649
CmoCh04G008840	Csa4G095590	Cucumber (Chinese Long) v2	cmocuB703
CmoCh04G008840	ClCG10G008910	Watermelon (Charleston Gray)	cmowcgB616
CmoCh04G008840	CSPI04G08680	Wild cucumber (PI 183967)	cmocpiB711
CmoCh04G008840	Lsi03G009230	Bottle gourd (USVL1VR-Ls)	cmolsiB651
CmoCh04G008840	Cp4.1LG14g01000	Cucurbita pepo (Zucchini)	cmocpeB667
CmoCh04G008840	Cp4.1LG01g09210	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G008840	MELO3C018956.2	Melon (DHL92) v3.6.1	cmomedB784
CmoCh04G008840	CsaV3_4G008890	Cucumber (Chinese Long) v3	cmocucB0831
CmoCh04G008840	Cla97C10G192150	Watermelon (97103) v2	cmowmbB689
CmoCh04G008840	Bhi11G000827	Wax gourd	cmowgoB0818
CmoCh04G008840	CsGy4G008510	Cucumber (Gy14) v2	cgybcmoB519
CmoCh04G008840	Carg05830	Silver-seed gourd	carcmoB1371
CmoCh04G008840	Carg14227	Silver-seed gourd	carcmoB1259

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G008840	CmoCh16G007720	Cucurbita moschata (Rifu)	cmocmoB285

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G008840	Cucumber (Chinese Long) v3	cmocucB0909
CmoCh04G008840	Watermelon (97103) v2	cmowmbB682
CmoCh04G008840	Cucurbita moschata (Rifu)	cmocmoB451
CmoCh04G008840	Cucumber (Gy14) v1	cgycmoB0229
CmoCh04G008840	Wild cucumber (PI 183967)	cmocpiB775
CmoCh04G008840	Cucumber (Chinese Long) v2	cmocuB768
CmoCh04G008840	Melon (DHL92) v3.5.1	cmomeB690
CmoCh04G008840	Melon (DHL92) v3.5.1	cmomeB702
CmoCh04G008840	Watermelon (Charleston Gray)	cmowcgB641
CmoCh04G008840	Watermelon (97103) v1	cmowmB711
CmoCh04G008840	Cucurbita pepo (Zucchini)	cmocpeB655
CmoCh04G008840	Bottle gourd (USVL1VR-Ls)	cmolsiB628
CmoCh04G008840	Cucumber (Gy14) v2	cgybcmoB824
CmoCh04G008840	Melon (DHL92) v3.6.1	cmomedB801