CmoCh04G008090 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.GCTAAAAAGAAGAGGCGGGTTGGGCCTCAAAATTTGCTCTGTTATCGTATTTTTGTGCATTCTCCTGTTATTGGTCTTTTTCTTCTGATCTTATTTTTTCAGGTACAGTAACGAACAACACCAATATTGTCTGACAATTCCATCTTCTCTTACTCACTTTGATTCCTTGTTCGTCCTCTTCCTCTTCTTCTTCTTCCCTTTCAATCGCTATCTTCTAATTCCGTTATTCCGCTACATTTTTCACTTTTCAAGTTTGTTTTTCCACTGTAGTGTATCCCCCTTTTCTTCTGTTCGTGGTGTTCATCATCAGTGTGATTTTCTCGATTATTCTTGCACTTTCTTTCTGGGTTCTGTTCGTTTGTTTGAACCCTCCAATTTGATTGAGATCAGGTGATTTTTGGGGTTTTCACTGGGTGTTTGGTGAACGGATTTTAGGGTTTTGGGGGCGACTTTTTTCTAGCCGATGAGACTACTTTTGGGTCTTTTTTCTTCATCGATTCGAGTTTTGCTGTCCCTTGCGTATGGATGTCTTTTTAGGAATCTGATTACTTTGAGCTCGGTCTCGCTTTAGATATACTACGTATCATTTGGTGCATTCGAGTTTCGTTTGCTCGATTTTGATTTTGAGTTTTAGTTAAACCAATTTTGATGAAGGCGTAAGTTGTTTATACTCAGTTATCTACTTGTGTTTCAAAGTATCTTATATGTCCGATGTAGCTTGCGAGATGCTAATTTCGATTCTTTCCTTTGGCTGGCTGATATTGTGTTGCTTAGAAGTTTAAAGTGCTGCTTGAGCGTTCTAAAGGTCTTGGTGTTATATAGATAATTCAAGTATTACATTGATGGTGTTTGTACTGTATGTCTCTTGGATGTCAATGTTTTCCTATTGGGAGCTTATTGTTTTCCATTTTTTTTGTGCAAAATTTTGGATAATCAGTTATGGCCACAGAGGAAGATCTTGATCTGTCAACTTTGCAAACTCAGCTCAGTGAAACAAATGGAAATTGGAAGCATGAAATGGAACGGCGCCAATCAAAAGTAGATGTGCTGCAAGCAAGGGTTGTGGAGGTAAAGGCTTCTATAGAAGGTTCTGAGGAAGACTCTAGAAAGGAGCTAGAGGTTCTCTGGCGGAGAGTTACGACAACTTCTACATTGTTGACATACTTGAAATCAAAAGCTAAAATGTTGGCAGTGCCCCATTTAGCTCACTCTTCATGTGGTATTAAACACTTAGAAGGAGTAGGATTTGTTGACAAAAGTGGAACACCACTGTCTGGTTGGTCTAAGAGTATTGATCTTTCTTCATTTGATGGTTGTGAAGAGGAATCCTTAATGGTTATTGGGAAGCCATGTGGTTTATTAGATGAACAAGATGCAGCTTATATTGGTCAAATACTCAAGTCTGTACAGATAGTTTCAGCTGTAATGGAAGCACTTGTCAAGAGGGTTATTCTGGCAGAATCGGAAGCTGCTGAAGAGAAGGAAAAGGTACATTTGGGTCAGGAGGAAATTAAGAAGAAATCAATCCAGATTGAGAACATGTCTTCAAAACTGGAGGAAATGGAACAGTTTGCTGTGGGTACTAATGGTATTCTAAATGAAATGCGGCTGAGAGTTGAGGATCTGGTTGAAGAAACGTGTAGACAGAGGCAAAGAGCTGCTGAAAATGAGCAGGAACTATGTCATGTTAAGCAGGACTTTGAGTCCTTGAAATCATATGTCAGTAGCCTCATCACTGTTAGAGAAACACTTTTGTCATCGGAAAAGCAGTTTCAGACAATCGAGAGGCTGTTTGAACGGTTCGTATGCTTTTTTTAATGTTATATTGCTCTGGTTATCCTGAATGCTCAGTATGTTTGGTAGATTTTCCTGGATGTTTCAATTTGAGTCTTTTCTTTCGTTATACTCATGGCTTCTTTTATTTTATTTTAACTTGAACTGCACCTATATGATTTCCTATGCACTAAGATTTTGTTTGTACTTGTATTGCTTTGTGAGCCAGCTCATGGCAGACCTTTAGAGCTCAACAGCATGGTTTCACTTAATGGATTTTTCTTACTGTTATTTGTGTTTTTCTCAAGAGACAATCATAGGAAAATGCATTGATTGCAAACGGTTCAAACTCCATGAGCTTAATGATCTTTGTACATGTTTGTTTCAAATAGGCCTTTAAAATTCAAAAAATTTCTAATAGATCCATAAACATTCAATTTTGTGTCTAATAAGTACCTAAATTTGTTAAGCTAGTAAGTTTCTAAACTTTCAGTTTTATGTTTATTAATTCCTTGACTTTTGAATTTTGTATCAACTAGATTATTGACTTATTTGACATTTTTTAGAGCTCATGAATATGTTTAGGGACCTTAGACACAAAGTTGGAAGTTTAACAACTTATTTGACATTATCGAGAGACTTATTATATATAAAGCTCTGGACCGGTTGTACTGGTTATAGTTTAGAGAATTATTAGACACAAACATAGAAGTTTAGAGACTAAACTGGTAATTTGAGGAAAAAAAAATCGATGGTGAGCTGATTTTAAAACTCTTGAGATGTGAGATTGGATAATAATACTCAGAATGGTAGCTTGCAACTATGATGATGTTATAAATTTTTGTGAAGAATACAGAGAATGGGGCATGGAAATGTGAGTTTGTGTAGTTTGCCTAATAAATAGTTTTCACAGGCTTTTAAATTCTATGAAACAGGCTAGTTGCAAAGACGAGTCAGTTGGAGGGTGAGAAAATGCAGAAAGAAGTAGAAGTTCAGAAACTTATGGAAGATAATGTGAGGTTGAGTGCCCTTCTTGACAAAAAAGAGGCTCAACTTGTGGCCATGAATGAACAATGCAAGGTTATGGCCTTGAGTGCCTCACATATTTAGTCCAAAACTCCTCCTCCTTGCTCATCAGCCAGCCTAGTAACGCTTCATCTCGGTTCACGATCCCGGGCCAACCAAGGTGTCAGCCGCATCAGGTATTCTTGCATATAAATGTATTTACAAAAACCCTTGTGGACTATAGTGTGTAG GCTAAAAAGAAGAGGCGGGTTGGGCCTCAAAATTTGCTCTGTTATCGTATTTTTGTGCATTCTCCTGTTATTGGTCTTTTTCTTCTGATCTTATTTTTTCAGGTACAGTAACGAACAACACCAATATTGTCTGACAATTCCATCTTCTCTTACTCACTTTGATTCCTTGTTCGTCCTCTTCCTCTTCTTCTTCTTCCCTTTCAATCGCTATCTTCTAATTCCGTTATTCCGCTACATTTTTCACTTTTCAAGTTTGTTTTTCCACTGTAGTGTATCCCCCTTTTCTTCTGTTCGTGGTGTTCATCATCAGTGTGATTTTCTCGATTATTCTTGCACTTTCTTTCTGGGTTCTGTTCGTTTGTTTGAACCCTCCAATTTGATTGAGATCAGTTATGGCCACAGAGGAAGATCTTGATCTGTCAACTTTGCAAACTCAGCTCAGTGAAACAAATGGAAATTGGAAGCATGAAATGGAACGGCGCCAATCAAAAGTAGATGTGCTGCAAGCAAGGGTTGTGGAGGTAAAGGCTTCTATAGAAGGTTCTGAGGAAGACTCTAGAAAGGAGCTAGAGGTTCTCTGGCGGAGAGTTACGACAACTTCTACATTGTTGACATACTTGAAATCAAAAGCTAAAATGTTGGCAGTGCCCCATTTAGCTCACTCTTCATGTGGTATTAAACACTTAGAAGGAGTAGGATTTGTTGACAAAAGTGGAACACCACTGTCTGGTTGGTCTAAGAGTATTGATCTTTCTTCATTTGATGGTTGTGAAGAGGAATCCTTAATGGTTATTGGGAAGCCATGTGGTTTATTAGATGAACAAGATGCAGCTTATATTGGTCAAATACTCAAGTCTGTACAGATAGTTTCAGCTGTAATGGAAGCACTTGTCAAGAGGGTTATTCTGGCAGAATCGGAAGCTGCTGAAGAGAAGGAAAAGGTACATTTGGGTCAGGAGGAAATTAAGAAGAAATCAATCCAGATTGAGAACATGTCTTCAAAACTGGAGGAAATGGAACAGTTTGCTGTGGGTACTAATGGTATTCTAAATGAAATGCGGCTGAGAGTTGAGGATCTGGTTGAAGAAACGTGTAGACAGAGGCAAAGAGCTGCTGAAAATGAGCAGGAACTATGTCATGTTAAGCAGGACTTTGAGTCCTTGAAATCATATGTCAGTAGCCTCATCACTGTTAGAGAAACACTTTTGTCATCGGAAAAGCAGTTTCAGACAATCGAGAGGCTGTTTGAACGGCTAGTTGCAAAGACGAGTCAGTTGGAGGGTGAGAAAATGCAGAAAGAAGTAGAAGTTCAGAAACTTATGGAAGATAATTGCCTCACATATTTAGTCCAAAACTCCTCCTCCTTGCTCATCAGCCAGCCTAGTAACGCTTCATCTCGGTTCACGATCCCGGGCCAACCAAGGTGTCAGCCGCATCAGGTATTCTTGCATATAAATGTATTTACAAAAACCCTTGTGGACTATAGTGTGTAG ATGGCCACAGAGGAAGATCTTGATCTGTCAACTTTGCAAACTCAGCTCAGTGAAACAAATGGAAATTGGAAGCATGAAATGGAACGGCGCCAATCAAAAGTAGATGTGCTGCAAGCAAGGGTTGTGGAGGTAAAGGCTTCTATAGAAGGTTCTGAGGAAGACTCTAGAAAGGAGCTAGAGGTTCTCTGGCGGAGAGTTACGACAACTTCTACATTGTTGACATACTTGAAATCAAAAGCTAAAATGTTGGCAGTGCCCCATTTAGCTCACTCTTCATGTGGTATTAAACACTTAGAAGGAGTAGGATTTGTTGACAAAAGTGGAACACCACTGTCTGGTTGGTCTAAGAGTATTGATCTTTCTTCATTTGATGGTTGTGAAGAGGAATCCTTAATGGTTATTGGGAAGCCATGTGGTTTATTAGATGAACAAGATGCAGCTTATATTGGTCAAATACTCAAGTCTGTACAGATAGTTTCAGCTGTAATGGAAGCACTTGTCAAGAGGGTTATTCTGGCAGAATCGGAAGCTGCTGAAGAGAAGGAAAAGGTACATTTGGGTCAGGAGGAAATTAAGAAGAAATCAATCCAGATTGAGAACATGTCTTCAAAACTGGAGGAAATGGAACAGTTTGCTGTGGGTACTAATGGTATTCTAAATGAAATGCGGCTGAGAGTTGAGGATCTGGTTGAAGAAACGTGTAGACAGAGGCAAAGAGCTGCTGAAAATGAGCAGGAACTATGTCATGTTAAGCAGGACTTTGAGTCCTTGAAATCATATGTCAGTAGCCTCATCACTGTTAGAGAAACACTTTTGTCATCGGAAAAGCAGTTTCAGACAATCGAGAGGCTGTTTGAACGGCTAGTTGCAAAGACGAGTCAGTTGGAGGGTGAGAAAATGCAGAAAGAAGTAGAAGTTCAGAAACTTATGGAAGATAATTGCCTCACATATTTAGTCCAAAACTCCTCCTCCTTGCTCATCAGCCAGCCTAGTAACGCTTCATCTCGGTTCACGATCCCGGGCCAACCAAGGTGTCAGCCGCATCAGGTATTCTTGCATATAAATGTATTTACAAAAACCCTTGTGGACTATAGTGTGTAG
BLAST of CmoCh04G008090 vs. TrEMBL
Match: A0A0A0KUI9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G046630 PE=4 SV=1) HSP 1 Score: 522.3 bits (1344), Expect = 4.7e-145 Identity = 285/329 (86.63%), Postives = 306/329 (93.01%), Query Frame = 1
BLAST of CmoCh04G008090 vs. TrEMBL
Match: A0A067LHC2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06511 PE=4 SV=1) HSP 1 Score: 454.1 bits (1167), Expect = 1.6e-124 Identity = 246/329 (74.77%), Postives = 293/329 (89.06%), Query Frame = 1
BLAST of CmoCh04G008090 vs. TrEMBL
Match: M5W9Q2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008117mg PE=4 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 2.1e-124 Identity = 247/329 (75.08%), Postives = 289/329 (87.84%), Query Frame = 1
BLAST of CmoCh04G008090 vs. TrEMBL
Match: B9SXM6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0017860 PE=4 SV=1) HSP 1 Score: 450.7 bits (1158), Expect = 1.7e-123 Identity = 246/329 (74.77%), Postives = 290/329 (88.15%), Query Frame = 1
BLAST of CmoCh04G008090 vs. TrEMBL
Match: W9SN18_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026697 PE=4 SV=1) HSP 1 Score: 446.0 bits (1146), Expect = 4.3e-122 Identity = 246/329 (74.77%), Postives = 284/329 (86.32%), Query Frame = 1
BLAST of CmoCh04G008090 vs. TAIR10
Match: AT2G17990.1 (AT2G17990.1 BEST Arabidopsis thaliana protein match is: kinectin-related (TAIR:AT5G66250.3)) HSP 1 Score: 291.2 bits (744), Expect = 8.9e-79 Identity = 177/334 (52.99%), Postives = 243/334 (72.75%), Query Frame = 1
BLAST of CmoCh04G008090 vs. TAIR10
Match: AT5G66250.4 (AT5G66250.4 kinectin-related) HSP 1 Score: 202.2 bits (513), Expect = 5.4e-52 Identity = 124/209 (59.33%), Postives = 154/209 (73.68%), Query Frame = 1
BLAST of CmoCh04G008090 vs. TAIR10
Match: AT4G36105.2 (AT4G36105.2 unknown protein) HSP 1 Score: 90.5 bits (223), Expect = 2.3e-18 Identity = 92/291 (31.62%), Postives = 152/291 (52.23%), Query Frame = 1
BLAST of CmoCh04G008090 vs. NCBI nr
Match: gi|659102367|ref|XP_008452091.1| (PREDICTED: LOW QUALITY PROTEIN: polyamine-modulated factor 1-binding protein 1-like [Cucumis melo]) HSP 1 Score: 526.6 bits (1355), Expect = 3.6e-146 Identity = 288/329 (87.54%), Postives = 307/329 (93.31%), Query Frame = 1
BLAST of CmoCh04G008090 vs. NCBI nr
Match: gi|449457526|ref|XP_004146499.1| (PREDICTED: putative golgin subfamily A member 6-like protein 8 [Cucumis sativus]) HSP 1 Score: 522.3 bits (1344), Expect = 6.7e-145 Identity = 285/329 (86.63%), Postives = 306/329 (93.01%), Query Frame = 1
BLAST of CmoCh04G008090 vs. NCBI nr
Match: gi|1009144212|ref|XP_015889675.1| (PREDICTED: uncharacterized protein LOC107424399 [Ziziphus jujuba]) HSP 1 Score: 465.3 bits (1196), Expect = 9.8e-128 Identity = 249/313 (79.55%), Postives = 282/313 (90.10%), Query Frame = 1
BLAST of CmoCh04G008090 vs. NCBI nr
Match: gi|802537650|ref|XP_012065650.1| (PREDICTED: uncharacterized protein LOC105628777 [Jatropha curcas]) HSP 1 Score: 454.1 bits (1167), Expect = 2.3e-124 Identity = 246/329 (74.77%), Postives = 293/329 (89.06%), Query Frame = 1
BLAST of CmoCh04G008090 vs. NCBI nr
Match: gi|595805603|ref|XP_007202321.1| (hypothetical protein PRUPE_ppa008117mg [Prunus persica]) HSP 1 Score: 453.8 bits (1166), Expect = 2.9e-124 Identity = 247/329 (75.08%), Postives = 289/329 (87.84%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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