CmoCh04G007680 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G007680
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionWRKY transcription factor, putative
LocationCmo_Chr04 : 3846274 .. 3847621 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTATATTCAAAGTGATCTTTGAATTTGATATCCATGGAGGATTGGGATTTGCAGGCAATAGTGAAAGGGTGCAGTAGTAGGCCAACCTCTATGCTTCAAGATCCTTTCTTTTCTTTTTTGAGCGAAGAAGATGACTTTTCTTGTGATTTTTCTTCTTCTTCTTCTTGTTCTTCGCATGAATTTGAAGGATTTGGGAGCTCCATTTTTCCAGTTTTTCATCCCTTGATTCCTTATCCAAACAATTCCGCCGCCATTTCTGATCTTCTCGGAGAGTTTAAGGAGCCACAAAAGCTTCTTCAGAAGAAGCAAATTTCAGCTATTAAGCAAAAACAAAGGTGGGTACTTCAATTTCCATGTTCTTGTTTCTTTTTCTTATAAAAAGATTTTTTTTTTTTTTTTTTGTTAGAAATTACGATCTCCAAAATGGTATGATATTGTCCATCTTCAAAAGGCTTCGTACCAACGTAGATATATTCTTTAGTTATAAATTTATGATCCTTCTGAGAATTAGCCAATGTGAGATTTTCTCCCAATAATCCTGAACAATTTTGTGTTTTTTTGGTTCGATTAGCAAAAAAAGTCGACAAAATAGGGTGGTGAAAGAGGTGAAAGCAGACGGTGTATGCTCAGATTCATGGGGATGGAGAAAATATGGACAGAAACCAATAAAAGGGTCGCCATATCCAAGAAGCTATTACAGATGCAGCTCCTCAAAAGGATGCTCAGCCAGAAAGCAAGTTGAACGGAGCTTCTCCGATCCCAACATCTTCGTCGTTACCTACACAGCCGAGCACAACCATGCCGAGCCAACTCGTCGCAATGCCCTCGCCGGGACTACTCGAAAGAAATTCCCGGCACCGGAGAATCCGAGCTTCGACGTGATTCTCTCTCCCAATGATTCTACTTGTGTGGCATCCATTGAAGAAGAACAGCCAATGGAGGGTGTGGGTGAAGGGGGAGTTTTGATGCATATACCGTTTGAATTCTCTAGCGAAGATTTGTTTACTGGTTTGGAGGATTTGCTTTTTGAATGACTAAGTTTTGTGGTTTTGGAAAGAGATTGTTGTGGATTGAGAATTGTGAAACTTATGATTCTCCTATTATTTGGGAAGAACACATGATGGTGATGAGGGTTGAGTAGCAAATTCAAAGAAATTGATATTAGTGGTAGATGCTTTGGGATGGTTGATCAAGAGAGCTTCAAGTATGTGATATCTATTAACAATTTGATATCATGTAAATTATGTGTAATTGATATTGAGGAAAGAACTCTTGTAATTGTTAAATGTTGGGATTAAAGTCAAGAAAATGAGTAGTAAAGGCAATATCTTTATGCTAATTGAATAG

mRNA sequence

TTTATATTCAAAGTGATCTTTGAATTTGATATCCATGGAGGATTGGGATTTGCAGGCAATAGTGAAAGGGTGCAGTAGTAGGCCAACCTCTATGCTTCAAGATCCTTTCTTTTCTTTTTTGAGCGAAGAAGATGACTTTTCTTGTGATTTTTCTTCTTCTTCTTCTTGTTCTTCGCATGAATTTGAAGGATTTGGGAGCTCCATTTTTCCAGTTTTTCATCCCTTGATTCCTTATCCAAACAATTCCGCCGCCATTTCTGATCTTCTCGGAGAGTTTAAGGAGCCACAAAAGCTTCTTCAGAAGAAGCAAATTTCAGCTATTAAGCAAAAACAAAGCAAAAAAAGTCGACAAAATAGGGTGGTGAAAGAGGTGAAAGCAGACGGTGTATGCTCAGATTCATGGGGATGGAGAAAATATGGACAGAAACCAATAAAAGGGTCGCCATATCCAAGAAGCTATTACAGATGCAGCTCCTCAAAAGGATGCTCAGCCAGAAAGCAAGTTGAACGGAGCTTCTCCGATCCCAACATCTTCGTCGTTACCTACACAGCCGAGCACAACCATGCCGAGCCAACTCGTCGCAATGCCCTCGCCGGGACTACTCGAAAGAAATTCCCGGCACCGGAGAATCCGAGCTTCGACGTGATTCTCTCTCCCAATGATTCTACTTGTGTGGCATCCATTGAAGAAGAACAGCCAATGGAGGGTGTGGGTGAAGGGGGAGTTTTGATGCATATACCGTTTGAATTCTCTAGCGAAGATTTGTTTACTGGTTTGGAGGATTTGCTTTTTGAATGACTAAGTTTTGTGGTTTTGGAAAGAGATTGTTGTGGATTGAGAATTGTGAAACTTATGATTCTCCTATTATTTGGGAAGAACACATGATGGTGATGAGGGTTGAGTAGCAAATTCAAAGAAATTGATATTAGTGGTAGATGCTTTGGGATGGTTGATCAAGAGAGCTTCAAGTATGTGATATCTATTAACAATTTGATATCATGTAAATTATGTGTAATTGATATTGAGGAAAGAACTCTTGTAATTGTTAAATGTTGGGATTAAAGTCAAGAAAATGAGTAGTAAAGGCAATATCTTTATGCTAATTGAATAG

Coding sequence (CDS)

ATGGAGGATTGGGATTTGCAGGCAATAGTGAAAGGGTGCAGTAGTAGGCCAACCTCTATGCTTCAAGATCCTTTCTTTTCTTTTTTGAGCGAAGAAGATGACTTTTCTTGTGATTTTTCTTCTTCTTCTTCTTGTTCTTCGCATGAATTTGAAGGATTTGGGAGCTCCATTTTTCCAGTTTTTCATCCCTTGATTCCTTATCCAAACAATTCCGCCGCCATTTCTGATCTTCTCGGAGAGTTTAAGGAGCCACAAAAGCTTCTTCAGAAGAAGCAAATTTCAGCTATTAAGCAAAAACAAAGCAAAAAAAGTCGACAAAATAGGGTGGTGAAAGAGGTGAAAGCAGACGGTGTATGCTCAGATTCATGGGGATGGAGAAAATATGGACAGAAACCAATAAAAGGGTCGCCATATCCAAGAAGCTATTACAGATGCAGCTCCTCAAAAGGATGCTCAGCCAGAAAGCAAGTTGAACGGAGCTTCTCCGATCCCAACATCTTCGTCGTTACCTACACAGCCGAGCACAACCATGCCGAGCCAACTCGTCGCAATGCCCTCGCCGGGACTACTCGAAAGAAATTCCCGGCACCGGAGAATCCGAGCTTCGACGTGATTCTCTCTCCCAATGATTCTACTTGTGTGGCATCCATTGAAGAAGAACAGCCAATGGAGGGTGTGGGTGAAGGGGGAGTTTTGATGCATATACCGTTTGAATTCTCTAGCGAAGATTTGTTTACTGGTTTGGAGGATTTGCTTTTTGAATGA
Homology
[Close]
BLAST of CmoCh04G007680 vs. Swiss-Prot
Match: WRK29_ARATH (Probable WRKY transcription factor 29 OS=Arabidopsis thaliana GN=WRKY29 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.4e-35
Identity = 98/242 (40.50%), Postives = 136/242 (56.20%), Query Frame = 1 

Query: 1   MEDWDLQAIVKGCSSRPTSMLQDPFFSFLSEEDDFSCDFSSSSSCSSHEFEGFG-SSIFP 60
           M++ DL+AIV+G S    +   +   +F        C    +SS    E E  G   +  
Sbjct: 1   MDEGDLEAIVRGYSGSGDAFSGESSGTFSPS----FCLPMETSSFYEPEMETSGLDELGE 60

Query: 61  VFHPLIPYPNNSAAISDL-LGEFKEPQKLLQKKQ----------------ISAIKQKQSK 120
           ++ P  P+   +   S + L E  +P +  +K++                IS  K K+SK
Sbjct: 61  LYKPFYPFSTQTILTSSVSLPEDSKPFRDDKKQRSHGCLLSNGSRADHIRISESKSKKSK 120

Query: 121 KSRQNRVVKEVKADGVCSDSWGWRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERSFS 180
           K++Q RVV++VK + + SD+W WRKYGQKPIKGSPYPRSYYRCSSSKGC ARKQVER+  
Sbjct: 121 KNQQKRVVEQVKEENLLSDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERNPQ 180

Query: 181 DPNIFVVTYTAEHNHAEPTRRNALAGTTRKKFPAP-----ENPSFDVILSPNDSTCVASI 220
           +P  F +TYT EHNH  PTRRN+LAG+TR K   P     +    +V+ SP  +  + S 
Sbjct: 181 NPEKFTITYTNEHNHELPTRRNSLAGSTRAKTSQPKPTLTKKSEKEVVSSPTSNPMIPSA 238

[Close]
BLAST of CmoCh04G007680 vs. Swiss-Prot
Match: WRK27_ARATH (Probable WRKY transcription factor 27 OS=Arabidopsis thaliana GN=WRKY27 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.8e-32
Identity = 76/153 (49.67%), Postives = 103/153 (67.32%), Query Frame = 1 

Query: 68  PNNSAAISDLLGEFKEPQKLLQKKQISAIKQKQSKKSRQNRVVKEVKADGVCSDSWGWRK 127
           P+ S+++    G+     +LLQ++    ++ ++ +K++Q R +  V  + + SD W WRK
Sbjct: 117 PSTSSSVFVFRGQ---RDQLLQQQSQPPLRSRK-RKNQQKRTICHVTQENLSSDLWAWRK 176

Query: 128 YGQKPIKGSPYPRSYYRCSSSKGCSARKQVERSFSDPNIFVVTYTAEHNHAEPTRRNALA 187
           YGQKPIKGSPYPR+YYRCSSSKGC ARKQVERS  DPNIF+VTYT EH H  PT RN+LA
Sbjct: 177 YGQKPIKGSPYPRNYYRCSSSKGCLARKQVERSNLDPNIFIVTYTGEHTHPRPTHRNSLA 236

Query: 188 GTTRKKFPAPENPSFDVILSPNDSTCVASIEEE 221
           G+TR K   P NP    +  P+ S    +++EE
Sbjct: 237 GSTRNK-SQPVNP----VPKPDTSPLSDTVKEE 260

[Close]
BLAST of CmoCh04G007680 vs. Swiss-Prot
Match: WRK22_ARATH (WRKY transcription factor 22 OS=Arabidopsis thaliana GN=WRKY22 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.4e-32
Identity = 96/282 (34.04%), Postives = 140/282 (49.65%), Query Frame = 1 

Query: 2   EDWDLQAIVKGCSSRPTSMLQDPFFSFLSEEDDFSCDFSSSSSCSSHEFEGFGSSIFPVF 61
           +DWDL A+V+GCS+  +S     +   +S   +        S+  S     FG     + 
Sbjct: 3   DDWDLHAVVRGCSAVSSSATTTVYSPGVSSHTNPIFTVGRQSNAVS-----FGE----IR 62

Query: 62  HPLIPYPNNSAAIS-DLLGEFKEPQKLLQKKQISAIK---------------QKQSKKSR 121
               P+   S   S   +   +EP+K   +K+  ++                 +  ++  
Sbjct: 63  DLYTPFTQESVVSSFSCINYPEEPRKPQNQKRPLSLSASSGSVTSKPSGSNTSRSKRRKI 122

Query: 122 QNRVVKEVKADGVCSDSWGWRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERSFSDPN 181
           Q++ V  V A+ + SD W WRKYGQKPIKGSPYPR YYRCS+SKGC ARKQVER+ SDP 
Sbjct: 123 QHKKVCHVAAEALNSDVWAWRKYGQKPIKGSPYPRGYYRCSTSKGCLARKQVERNRSDPK 182

Query: 182 IFVVTYTAEHNHAEPTRRNALAGTTRKK-----------------FPAPENPSFDVILSP 241
           +F+VTYTAEHNH  PT RN+LAG+TR+K                   +P   + + +L  
Sbjct: 183 MFIVTYTAEHNHPAPTHRNSLAGSTRQKPSDQQTSKSPTTTIATYSSSPVTSADEFVLPV 242

Query: 242 NDSTCVASIEEEQPMEGVGEGGVLMHIPFEFSSEDLFTGLED 251
            D   V  ++ E+ +  + +  V         S+D F GLE+
Sbjct: 243 EDHLAVGDLDGEEDLLSLSDTVV---------SDDFFDGLEE 266

[Close]
BLAST of CmoCh04G007680 vs. Swiss-Prot
Match: WRK35_ARATH (Probable WRKY transcription factor 35 OS=Arabidopsis thaliana GN=WRKY35 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.5e-30
Identity = 69/113 (61.06%), Postives = 80/113 (70.80%), Query Frame = 1 

Query: 89  QKKQISAIKQKQSKKSRQNRVVKEVKADGVCSDSWGWRKYGQKPIKGSPYPRSYYRCSSS 148
           Q K++  I    +  SR +  V       V SD W WRKYGQKPIKGSPYPR YYRCSSS
Sbjct: 191 QAKKVVCIPAPAAMNSRSSGEV-------VPSDLWAWRKYGQKPIKGSPYPRGYYRCSSS 250

Query: 149 KGCSARKQVERSFSDPNIFVVTYTAEHNHAEPTRRNALAGTTRKKFPAPENPS 202
           KGCSARKQVERS +DPN+ V+TYT+EHNH  PT+RNALAG+TR    +  NPS
Sbjct: 251 KGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSSSSSSLNPS 296

[Close]
BLAST of CmoCh04G007680 vs. Swiss-Prot
Match: WRK14_ARATH (Probable WRKY transcription factor 14 OS=Arabidopsis thaliana GN=WRKY14 PE=2 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 9.4e-29
Identity = 66/113 (58.41%), Postives = 79/113 (69.91%), Query Frame = 1 

Query: 89  QKKQISAIKQKQSKKSRQNRVVKEVKADGVCSDSWGWRKYGQKPIKGSPYPRSYYRCSSS 148
           Q K++  I    +  SR +  V       V SD W WRKYGQKPIKGSP+PR YYRCSSS
Sbjct: 193 QAKKVVCIPAPAAMNSRSSGEV-------VPSDLWAWRKYGQKPIKGSPFPRGYYRCSSS 252

Query: 149 KGCSARKQVERSFSDPNIFVVTYTAEHNHAEPTRRNALAGTTRKKFPAPENPS 202
           KGCSARKQVERS +DPN+ V+TYT+EHNH  P +RNALAG+TR    +  NP+
Sbjct: 253 KGCSARKQVERSRTDPNMLVITYTSEHNHPWPIQRNALAGSTRSSTSSSSNPN 298

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BLAST of CmoCh04G007680 vs. TrEMBL
Match: E7CEX4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=WRKY26 PE=2 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 8.2e-80
Identity = 187/283 (66.08%), Postives = 207/283 (73.14%), Query Frame = 1 

Query: 1   MEDWDLQAIVKGCSSRP---------TSMLQDP-FFSFL---SEEDDF--SCDFSSS--- 60
           MEDW LQAIVKGC+  P         T +++D  ++SFL    EED+F  SC ++SS   
Sbjct: 1   MEDWGLQAIVKGCNGIPIGSSTTAATTRLMEDSNWYSFLRSDQEEDEFFSSCVYNSSYNN 60

Query: 61  -----SSCSSHEFEG-FGSSIFPVFHPLIPYPNNSAA--ISDLLGEFKEP--QKLLQKKQ 120
                SS    EFEG FG +            NNSAA  IS LL +FKEP  QKL  K Q
Sbjct: 61  PQISSSSIFHDEFEGLFGRNS----------SNNSAAASISHLLRDFKEPADQKLHHKNQ 120

Query: 121 I-SAIKQKQSKKSRQNRVVKEVKADGVCSDSWGWRKYGQKPIKGSPYPRSYYRCSSSKGC 180
           I    KQKQSKKSRQNRVVKEVKAD VCSDSWGWRKYGQKPIKGSPYPRSYYRCSSSKGC
Sbjct: 121 IIQPTKQKQSKKSRQNRVVKEVKADKVCSDSWGWRKYGQKPIKGSPYPRSYYRCSSSKGC 180

Query: 181 SARKQVERSFSDPNIFVVTYTAEHNHAEPTRRNALAGTTRKKFPAPENPSFDVILSPNDS 240
           SARKQVERS SDP +F+VTYTAEHNHAEPTRRNALAGTTRKKFPA ENP+ D+ILSPN+S
Sbjct: 181 SARKQVERSLSDPEVFIVTYTAEHNHAEPTRRNALAGTTRKKFPALENPNLDMILSPNNS 240

Query: 241 TCVASIEEEQ-PMEGVGEGGVLMHIPFEFSSEDLFTGLEDLLF 254
           T VASIEE+Q PMEGV +G VL+ +PFEF     FTGLEDLLF
Sbjct: 241 TSVASIEEDQHPMEGVTDGEVLIDMPFEF-----FTGLEDLLF 268

[Close]
BLAST of CmoCh04G007680 vs. TrEMBL
Match: M5WSN2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025013mg PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 5.7e-41
Identity = 110/243 (45.27%), Postives = 146/243 (60.08%), Query Frame = 1 

Query: 1   MEDWDLQAIVKGCSSRPT-----SMLQDPF-FSFLS--EEDDFSCDFSS--SSSCSSHEF 60
           ME+WDLQA+V+GC++           Q P+ F+ LS  EEDDF         ++ +  E 
Sbjct: 1   MENWDLQAVVRGCNTTANIDEAMENSQIPYCFAPLSIEEEDDFFHALPQLFEATAALDEL 60

Query: 61  EGFGSSIFPVFHPLIP--YPNNSAAISDLLGEFKEPQKLLQKKQISAIKQKQSKKSRQNR 120
           E      +PV  P  P     +S ++       + P+KL   K+ S + +K S+K++  R
Sbjct: 61  EELYKPFYPVLQPSAPPVILASSMSVPQEAITVEVPKKL---KESSTVCKKISRKNQSKR 120

Query: 121 VVKEVKADGVCSDSWGWRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERSFSDPNIFV 180
           VVKEV+A+ + SD W WRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERS S+P  F+
Sbjct: 121 VVKEVRAEELFSDVWAWRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERSCSNPETFI 180

Query: 181 VTYTAEHNHAEPTRRNALAGTTRKKFPAPENPSFDVILSPNDSTCVASIEEEQPMEGVGE 232
           +TYTAEHNH  PTRRN+LAG+TR           + + SP  +   ASIEE+  ++    
Sbjct: 181 ITYTAEHNHVHPTRRNSLAGSTRS----------NSLNSPATTNLAASIEEDHDVQSAST 230

[Close]
BLAST of CmoCh04G007680 vs. TrEMBL
Match: B9RCH8_RICCO (WRKY transcription factor, putative OS=Ricinus communis GN=RCOM_1689100 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 7.5e-41
Identity = 110/228 (48.25%), Postives = 135/228 (59.21%), Query Frame = 1 

Query: 1   MEDWDLQAIVKGCSSRPTS---MLQDPFFSFLSEEDDFSCDFSSSSSCSSHEFEGFGSSI 60
           MEDWDL+A+V+GCS+       M+ +   S LS       D       SS +F  F +  
Sbjct: 7   MEDWDLEAVVRGCSTNEAFADIMINNNPPSVLSPLSTLDQD-DRQELLSSPDFFEFATKD 66

Query: 61  FP------VFHPLIPYPNNSA-----------AISDLLGEFKEPQKLLQKKQIS------ 120
           F        + PL+ YPN  A           ++S    + +EP+KL +K   S      
Sbjct: 67  FDYGVEKETYKPLLFYPNQQALSPQSILSPTSSMSIPSYDGQEPEKLQKKHLFSESDAPV 126

Query: 121 ---------AIKQKQSKKSRQNRVVKEVKADGVCSDSWGWRKYGQKPIKGSPYPRSYYRC 180
                    A K K+ +KS QNRVVK V ADG+ SD W WRKYGQKPIKGSPYPRSYYRC
Sbjct: 127 SCSDDATPLASKSKRCRKSAQNRVVKHVTADGLSSDMWAWRKYGQKPIKGSPYPRSYYRC 186

Query: 181 SSSKGCSARKQVERSFSDPNIFVVTYTAEHNHAEPTRRNALAGTTRKK 194
           SS KGC ARKQVERS SDP+IF++TYTAEH+HA PTRRN+LAG+TR K
Sbjct: 187 SSLKGCLARKQVERSSSDPSIFIITYTAEHSHAHPTRRNSLAGSTRIK 233

[Close]
BLAST of CmoCh04G007680 vs. TrEMBL
Match: W9SBD8_9ROSA (Putative WRKY transcription factor 29 OS=Morus notabilis GN=L484_006704 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 9.8e-41
Identity = 101/210 (48.10%), Postives = 130/210 (61.90%), Query Frame = 1 

Query: 2   EDWDLQAIVKGCSSR------PTSMLQDPFFSFL----SEEDDFSCDFSS--SSSCSSHE 61
           + WDL  +V+G S+        T++ +     F+     E DD  C +     ++ +  E
Sbjct: 4   QGWDLIDVVRGNSNNNMESFMSTNIRESATSCFVPRSVQENDDLFCAYPHLFETTTAFDE 63

Query: 62  FEGFGSSIFPVFHPLIPYPNNSAAISDLL---GEFKEPQKLLQKKQISAIKQKQSKKSRQ 121
            E      +PV H     P+   A    L    E   PQK+  KK   A  + + +K++Q
Sbjct: 64  LEDLYKPFYPVLHSPFSSPSTPLASCISLPQQAEINVPQKI--KKVKEAASKYKKRKNQQ 123

Query: 122 NRVVKEVKADGVCSDSWGWRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERSFSDPNI 181
            +VVK+VK DG+C+D W WRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERS S+P I
Sbjct: 124 KKVVKQVKEDGLCADMWAWRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERSPSNPEI 183

Query: 182 FVVTYTAEHNHAEPTRRNALAGTTRKKFPA 197
           FV+TYTAEH+H  PTRRN+LAG+TR KFPA
Sbjct: 184 FVITYTAEHSHTHPTRRNSLAGSTRSKFPA 211

[Close]
BLAST of CmoCh04G007680 vs. TrEMBL
Match: K7KRZ9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G211900 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.3e-40
Identity = 106/235 (45.11%), Postives = 137/235 (58.30%), Query Frame = 1 

Query: 1   MEDWDLQAIVKGCSSRPTSMLQDP---FFSFLSEEDDFSCDFSSSSSCSS--HEFEGFGS 60
           + DWDL+AIV+G +   T+M  DP   F  F SE+D+    F   S  +    + E    
Sbjct: 7   LRDWDLEAIVRGNTGEATTM-DDPNPDFSYFFSEQDELLDSFPEFSETTRVLDDLEDLYK 66

Query: 61  SIFPVFHPLIPY------PNNSAAISDLLGEFKEPQKLLQKKQISAIKQKQSKKSRQNRV 120
             +PVFHPL P+      P        ++   +E   L   K  +A K K+SKKS+   V
Sbjct: 67  PFYPVFHPLSPHTIVTTSPPIPIEPEQVIKASEEKVALQGLKVTAAPKCKKSKKSQNKSV 126

Query: 121 VKEVKADGVCSDSWGWRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERSFSDPNIFVV 180
           VK+V       D+W WRKYGQKPIKGSPYPRSYYRCSSSKGC ARKQVERS  DP +F+V
Sbjct: 127 VKQVTTAEGLDDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERSHLDPAVFLV 186

Query: 181 TYTAEHNHAEPTRRNALAGTTRKKFPAPENPSFDVILSPNDSTCVASIEEEQPME 225
           TYTAEH+H  PTRRN+LAGTTRK       P+         +TC +S+++   ++
Sbjct: 187 TYTAEHSHPHPTRRNSLAGTTRKNNSLVPPPT--TTRHQKKTTCSSSVQQSMDLK 238

[Close]
BLAST of CmoCh04G007680 vs. TAIR10
Match: AT4G23550.1 (AT4G23550.1 WRKY family transcription factor)

HSP 1 Score: 151.4 bits (381), Expect = 7.7e-37
Identity = 98/242 (40.50%), Postives = 136/242 (56.20%), Query Frame = 1 

Query: 1   MEDWDLQAIVKGCSSRPTSMLQDPFFSFLSEEDDFSCDFSSSSSCSSHEFEGFG-SSIFP 60
           M++ DL+AIV+G S    +   +   +F        C    +SS    E E  G   +  
Sbjct: 1   MDEGDLEAIVRGYSGSGDAFSGESSGTFSPS----FCLPMETSSFYEPEMETSGLDELGE 60

Query: 61  VFHPLIPYPNNSAAISDL-LGEFKEPQKLLQKKQ----------------ISAIKQKQSK 120
           ++ P  P+   +   S + L E  +P +  +K++                IS  K K+SK
Sbjct: 61  LYKPFYPFSTQTILTSSVSLPEDSKPFRDDKKQRSHGCLLSNGSRADHIRISESKSKKSK 120

Query: 121 KSRQNRVVKEVKADGVCSDSWGWRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERSFS 180
           K++Q RVV++VK + + SD+W WRKYGQKPIKGSPYPRSYYRCSSSKGC ARKQVER+  
Sbjct: 121 KNQQKRVVEQVKEENLLSDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERNPQ 180

Query: 181 DPNIFVVTYTAEHNHAEPTRRNALAGTTRKKFPAP-----ENPSFDVILSPNDSTCVASI 220
           +P  F +TYT EHNH  PTRRN+LAG+TR K   P     +    +V+ SP  +  + S 
Sbjct: 181 NPEKFTITYTNEHNHELPTRRNSLAGSTRAKTSQPKPTLTKKSEKEVVSSPTSNPMIPSA 238

[Close]
BLAST of CmoCh04G007680 vs. TAIR10
Match: AT5G52830.1 (AT5G52830.1 WRKY DNA-binding protein 27)

HSP 1 Score: 141.0 bits (354), Expect = 1.0e-33
Identity = 76/153 (49.67%), Postives = 103/153 (67.32%), Query Frame = 1 

Query: 68  PNNSAAISDLLGEFKEPQKLLQKKQISAIKQKQSKKSRQNRVVKEVKADGVCSDSWGWRK 127
           P+ S+++    G+     +LLQ++    ++ ++ +K++Q R +  V  + + SD W WRK
Sbjct: 117 PSTSSSVFVFRGQ---RDQLLQQQSQPPLRSRK-RKNQQKRTICHVTQENLSSDLWAWRK 176

Query: 128 YGQKPIKGSPYPRSYYRCSSSKGCSARKQVERSFSDPNIFVVTYTAEHNHAEPTRRNALA 187
           YGQKPIKGSPYPR+YYRCSSSKGC ARKQVERS  DPNIF+VTYT EH H  PT RN+LA
Sbjct: 177 YGQKPIKGSPYPRNYYRCSSSKGCLARKQVERSNLDPNIFIVTYTGEHTHPRPTHRNSLA 236

Query: 188 GTTRKKFPAPENPSFDVILSPNDSTCVASIEEE 221
           G+TR K   P NP    +  P+ S    +++EE
Sbjct: 237 GSTRNK-SQPVNP----VPKPDTSPLSDTVKEE 260

[Close]
BLAST of CmoCh04G007680 vs. TAIR10
Match: AT4G01250.1 (AT4G01250.1 WRKY family transcription factor)

HSP 1 Score: 140.6 bits (353), Expect = 1.4e-33
Identity = 96/282 (34.04%), Postives = 140/282 (49.65%), Query Frame = 1 

Query: 2   EDWDLQAIVKGCSSRPTSMLQDPFFSFLSEEDDFSCDFSSSSSCSSHEFEGFGSSIFPVF 61
           +DWDL A+V+GCS+  +S     +   +S   +        S+  S     FG     + 
Sbjct: 3   DDWDLHAVVRGCSAVSSSATTTVYSPGVSSHTNPIFTVGRQSNAVS-----FGE----IR 62

Query: 62  HPLIPYPNNSAAIS-DLLGEFKEPQKLLQKKQISAIK---------------QKQSKKSR 121
               P+   S   S   +   +EP+K   +K+  ++                 +  ++  
Sbjct: 63  DLYTPFTQESVVSSFSCINYPEEPRKPQNQKRPLSLSASSGSVTSKPSGSNTSRSKRRKI 122

Query: 122 QNRVVKEVKADGVCSDSWGWRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERSFSDPN 181
           Q++ V  V A+ + SD W WRKYGQKPIKGSPYPR YYRCS+SKGC ARKQVER+ SDP 
Sbjct: 123 QHKKVCHVAAEALNSDVWAWRKYGQKPIKGSPYPRGYYRCSTSKGCLARKQVERNRSDPK 182

Query: 182 IFVVTYTAEHNHAEPTRRNALAGTTRKK-----------------FPAPENPSFDVILSP 241
           +F+VTYTAEHNH  PT RN+LAG+TR+K                   +P   + + +L  
Sbjct: 183 MFIVTYTAEHNHPAPTHRNSLAGSTRQKPSDQQTSKSPTTTIATYSSSPVTSADEFVLPV 242

Query: 242 NDSTCVASIEEEQPMEGVGEGGVLMHIPFEFSSEDLFTGLED 251
            D   V  ++ E+ +  + +  V         S+D F GLE+
Sbjct: 243 EDHLAVGDLDGEEDLLSLSDTVV---------SDDFFDGLEE 266

[Close]
BLAST of CmoCh04G007680 vs. TAIR10
Match: AT2G34830.1 (AT2G34830.1 WRKY DNA-binding protein 35)

HSP 1 Score: 132.5 bits (332), Expect = 3.7e-31
Identity = 69/113 (61.06%), Postives = 80/113 (70.80%), Query Frame = 1 

Query: 89  QKKQISAIKQKQSKKSRQNRVVKEVKADGVCSDSWGWRKYGQKPIKGSPYPRSYYRCSSS 148
           Q K++  I    +  SR +  V       V SD W WRKYGQKPIKGSPYPR YYRCSSS
Sbjct: 191 QAKKVVCIPAPAAMNSRSSGEV-------VPSDLWAWRKYGQKPIKGSPYPRGYYRCSSS 250

Query: 149 KGCSARKQVERSFSDPNIFVVTYTAEHNHAEPTRRNALAGTTRKKFPAPENPS 202
           KGCSARKQVERS +DPN+ V+TYT+EHNH  PT+RNALAG+TR    +  NPS
Sbjct: 251 KGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSSSSSSLNPS 296

[Close]
BLAST of CmoCh04G007680 vs. TAIR10
Match: AT1G30650.1 (AT1G30650.1 WRKY DNA-binding protein 14)

HSP 1 Score: 128.6 bits (322), Expect = 5.3e-30
Identity = 66/113 (58.41%), Postives = 79/113 (69.91%), Query Frame = 1 

Query: 89  QKKQISAIKQKQSKKSRQNRVVKEVKADGVCSDSWGWRKYGQKPIKGSPYPRSYYRCSSS 148
           Q K++  I    +  SR +  V       V SD W WRKYGQKPIKGSP+PR YYRCSSS
Sbjct: 193 QAKKVVCIPAPAAMNSRSSGEV-------VPSDLWAWRKYGQKPIKGSPFPRGYYRCSSS 252

Query: 149 KGCSARKQVERSFSDPNIFVVTYTAEHNHAEPTRRNALAGTTRKKFPAPENPS 202
           KGCSARKQVERS +DPN+ V+TYT+EHNH  P +RNALAG+TR    +  NP+
Sbjct: 253 KGCSARKQVERSRTDPNMLVITYTSEHNHPWPIQRNALAGSTRSSTSSSSNPN 298

[Close]
BLAST of CmoCh04G007680 vs. NCBI nr
Match: gi|525506973|ref|NP_001267532.1| (WRKY transcription factor 22-like [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 1.2e-79
Identity = 187/283 (66.08%), Postives = 207/283 (73.14%), Query Frame = 1 

Query: 1   MEDWDLQAIVKGCSSRP---------TSMLQDP-FFSFL---SEEDDF--SCDFSSS--- 60
           MEDW LQAIVKGC+  P         T +++D  ++SFL    EED+F  SC ++SS   
Sbjct: 1   MEDWGLQAIVKGCNGIPIGSSTTAATTRLMEDSNWYSFLRSDQEEDEFFSSCVYNSSYNN 60

Query: 61  -----SSCSSHEFEG-FGSSIFPVFHPLIPYPNNSAA--ISDLLGEFKEP--QKLLQKKQ 120
                SS    EFEG FG +            NNSAA  IS LL +FKEP  QKL  K Q
Sbjct: 61  PQISSSSIFHDEFEGLFGRNS----------SNNSAAASISHLLRDFKEPADQKLHHKNQ 120

Query: 121 I-SAIKQKQSKKSRQNRVVKEVKADGVCSDSWGWRKYGQKPIKGSPYPRSYYRCSSSKGC 180
           I    KQKQSKKSRQNRVVKEVKAD VCSDSWGWRKYGQKPIKGSPYPRSYYRCSSSKGC
Sbjct: 121 IIQPTKQKQSKKSRQNRVVKEVKADKVCSDSWGWRKYGQKPIKGSPYPRSYYRCSSSKGC 180

Query: 181 SARKQVERSFSDPNIFVVTYTAEHNHAEPTRRNALAGTTRKKFPAPENPSFDVILSPNDS 240
           SARKQVERS SDP +F+VTYTAEHNHAEPTRRNALAGTTRKKFPA ENP+ D+ILSPN+S
Sbjct: 181 SARKQVERSLSDPEVFIVTYTAEHNHAEPTRRNALAGTTRKKFPALENPNLDMILSPNNS 240

Query: 241 TCVASIEEEQ-PMEGVGEGGVLMHIPFEFSSEDLFTGLEDLLF 254
           T VASIEE+Q PMEGV +G VL+ +PFEF     FTGLEDLLF
Sbjct: 241 TSVASIEEDQHPMEGVTDGEVLIDMPFEF-----FTGLEDLLF 268

[Close]
BLAST of CmoCh04G007680 vs. NCBI nr
Match: gi|659102203|ref|XP_008452006.1| (PREDICTED: probable WRKY transcription factor 29 [Cucumis melo])

HSP 1 Score: 302.4 bits (773), Expect = 7.6e-79
Identity = 187/285 (65.61%), Postives = 205/285 (71.93%), Query Frame = 1 

Query: 1   MEDWDLQAIVKGCSSRP---------TSMLQDP--FFSFL--SEEDD----FSCDFS--- 60
           MEDW LQAIVKGC+  P         T +++D    +SFL   +E+D     SC ++   
Sbjct: 1   MEDWGLQAIVKGCNGIPIGSSTTAATTRLMEDTNNLYSFLRSDQEEDGGFFSSCVYNNYY 60

Query: 61  ----SSSSCSSHEFEG-FGSSIFPVFHPLIPYPNNSAA--ISDLLGEFKEP--QKLLQKK 120
               SSSS    EFEG FG +            NNSAA  IS LL +FKEP  QKL  K 
Sbjct: 61  NPQISSSSIFHDEFEGLFGRNS----------SNNSAAASISHLLRDFKEPADQKLHHKN 120

Query: 121 QI-SAIKQKQSKKSRQNRVVKEVKADGVCSDSWGWRKYGQKPIKGSPYPRSYYRCSSSKG 180
           QI    KQKQSKKSRQNRVVKEVKAD VCSDSWGWRKYGQKPIKGSPYPRSYYRCSSSKG
Sbjct: 121 QIIQPTKQKQSKKSRQNRVVKEVKADKVCSDSWGWRKYGQKPIKGSPYPRSYYRCSSSKG 180

Query: 181 CSARKQVERSFSDPNIFVVTYTAEHNHAEPTRRNALAGTTRKKFPAPENPSFDVILSPND 240
           CSARKQVERS SDP +FVVTYTAEHNHAEPTRRNALAGTTRKKFPA ENP+ D+ILSPN+
Sbjct: 181 CSARKQVERSLSDPEVFVVTYTAEHNHAEPTRRNALAGTTRKKFPALENPNLDMILSPNN 240

Query: 241 STCVASIEEEQ--PMEGVGEGGVLMHIPFEFSSEDLFTGLEDLLF 254
           ST VASIEE+Q  PMEGV +G VLM +PFEF     FTGLEDLLF
Sbjct: 241 STSVASIEEDQHHPMEGVADGEVLMDMPFEF-----FTGLEDLLF 270

[Close]
BLAST of CmoCh04G007680 vs. NCBI nr
Match: gi|694433116|ref|XP_009343870.1| (PREDICTED: probable WRKY transcription factor 29 isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 191.8 bits (486), Expect = 1.4e-45
Identity = 109/232 (46.98%), Postives = 148/232 (63.79%), Query Frame = 1 

Query: 1   MEDWDLQAIVKGCSSRPTSMLQD---PFF----SFLSEEDDFSCDFSSSSSCSS--HEFE 60
           ME+WDLQA+V+GC+S    +++D   P+F    SF  + + F+  F  +   ++   E E
Sbjct: 1   MENWDLQAVVRGCNSNIDEVIEDSQIPYFCAPLSFQEDNELFAAKFPQAFEATTTLDELE 60

Query: 61  GFGSSIFPVFHPLIPYPNNSAAISDLLGEFKEPQKLLQKKQISAIKQKQSKKSRQNRVVK 120
                 +PVF    P    +++IS       +  KL++  + S   +K+ +K++  RVVK
Sbjct: 61  ELYKPFYPVFQLTTPPTILTSSISVPQEIITQAPKLIKNMEESTPVRKRIRKNQNKRVVK 120

Query: 121 EVKADGVCSDSWGWRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERSFSDPNIFVVTY 180
           EVKA+ + SD W WRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERS S+P  F++TY
Sbjct: 121 EVKAEDLFSDVWAWRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERSCSNPETFIITY 180

Query: 181 TAEHNHAEPTRRNALAGTTRKKFPAPENPS--FDVILSPNDSTCVASIEEEQ 222
           TAEHNH  PTRRN+LAG+TR KFP+ +N         SP      ASIE+++
Sbjct: 181 TAEHNHVHPTRRNSLAGSTRSKFPSSKNKDKCGSSSNSPATPNIAASIEDDR 232

[Close]
BLAST of CmoCh04G007680 vs. NCBI nr
Match: gi|694433114|ref|XP_009343869.1| (PREDICTED: probable WRKY transcription factor 29 isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 190.7 bits (483), Expect = 3.2e-45
Identity = 109/233 (46.78%), Postives = 150/233 (64.38%), Query Frame = 1 

Query: 1   MEDWDLQAIVKGCSSRPTSMLQD---PFF----SFLSEEDDFSCDFSSSSSCSS--HEFE 60
           ME+WDLQA+V+GC+S    +++D   P+F    SF  + + F+  F  +   ++   E E
Sbjct: 1   MENWDLQAVVRGCNSNIDEVIEDSQIPYFCAPLSFQEDNELFAAKFPQAFEATTTLDELE 60

Query: 61  GFGSSIFPVFHPLIPYPNNSAAISDLLGEFKEPQKLLQKKQISA-IKQKQSKKSRQNRVV 120
                 +PVF    P    +++IS       +  KL++  + S  ++++ S+K++  RVV
Sbjct: 61  ELYKPFYPVFQLTTPPTILTSSISVPQEIITQAPKLIKNMEESTPVRKRISRKNQNKRVV 120

Query: 121 KEVKADGVCSDSWGWRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERSFSDPNIFVVT 180
           KEVKA+ + SD W WRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERS S+P  F++T
Sbjct: 121 KEVKAEDLFSDVWAWRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERSCSNPETFIIT 180

Query: 181 YTAEHNHAEPTRRNALAGTTRKKFPAPENPS--FDVILSPNDSTCVASIEEEQ 222
           YTAEHNH  PTRRN+LAG+TR KFP+ +N         SP      ASIE+++
Sbjct: 181 YTAEHNHVHPTRRNSLAGSTRSKFPSSKNKDKCGSSSNSPATPNIAASIEDDR 233

[Close]
BLAST of CmoCh04G007680 vs. NCBI nr
Match: gi|694371827|ref|XP_009363390.1| (PREDICTED: probable WRKY transcription factor 29 [Pyrus x bretschneideri])

HSP 1 Score: 190.3 bits (482), Expect = 4.2e-45
Identity = 109/233 (46.78%), Postives = 150/233 (64.38%), Query Frame = 1 

Query: 1   MEDWDLQAIVKGCSSRPTSMLQD---PFF----SFLSEEDDFSCDFSSSSSCSS--HEFE 60
           ME+WDLQA+V+GC+S    +++D   P+F    SF  + + F+  F  +   ++   E E
Sbjct: 1   MENWDLQAVVRGCNSNIDEVIEDSQIPYFCAPLSFQEDNELFAAKFPQAFEVTTTLDELE 60

Query: 61  GFGSSIFPVFHPLIPYPNNSAAISDLLGEFKEPQKLLQKKQISA-IKQKQSKKSRQNRVV 120
                 +PVF    P    +++IS       +  KL++  + S  ++++ S+K++  RVV
Sbjct: 61  ELYKPFYPVFQLTTPPTILTSSISVPQEIITQAPKLIKNMEESTPVRKRISRKNQNKRVV 120

Query: 121 KEVKADGVCSDSWGWRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERSFSDPNIFVVT 180
           KEVKA+ + SD W WRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERS S+P  F++T
Sbjct: 121 KEVKAEDLFSDVWAWRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVERSCSNPETFIIT 180

Query: 181 YTAEHNHAEPTRRNALAGTTRKKFPAPENPS--FDVILSPNDSTCVASIEEEQ 222
           YTAEHNH  PTRRN+LAG+TR KFP+ +N         SP      ASIE+++
Sbjct: 181 YTAEHNHVHPTRRNSLAGSTRSKFPSSKNKDKCGSSSNSPATPNIAASIEDDR 233

The following BLAST results are available for this feature:
BLAST of CmoCh04G007680 vs. Swiss-Prot
Match NameE-valueIdentityDescription
WRK29_ARATH1.4e-3540.50Probable WRKY transcription factor 29 OS=Arabidopsis thaliana GN=WRKY29 PE=2 SV=... [more]
WRK27_ARATH1.8e-3249.67Probable WRKY transcription factor 27 OS=Arabidopsis thaliana GN=WRKY27 PE=2 SV=... [more]
WRK22_ARATH2.4e-3234.04WRKY transcription factor 22 OS=Arabidopsis thaliana GN=WRKY22 PE=2 SV=1[more]
WRK35_ARATH6.5e-3061.06Probable WRKY transcription factor 35 OS=Arabidopsis thaliana GN=WRKY35 PE=2 SV=... [more]
WRK14_ARATH9.4e-2958.41Probable WRKY transcription factor 14 OS=Arabidopsis thaliana GN=WRKY14 PE=2 SV=... [more]
BLAST of CmoCh04G007680 vs. TrEMBL
Match NameE-valueIdentityDescription
E7CEX4_CUCSA8.2e-8066.08Uncharacterized protein OS=Cucumis sativus GN=WRKY26 PE=2 SV=1[more]
M5WSN2_PRUPE5.7e-4145.27Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025013mg PE=4 SV=1[more]
B9RCH8_RICCO7.5e-4148.25WRKY transcription factor, putative OS=Ricinus communis GN=RCOM_1689100 PE=4 SV=... [more]
W9SBD8_9ROSA9.8e-4148.10Putative WRKY transcription factor 29 OS=Morus notabilis GN=L484_006704 PE=4 SV=... [more]
K7KRZ9_SOYBN1.3e-4045.11Uncharacterized protein OS=Glycine max GN=GLYMA_05G211900 PE=4 SV=1[more]
BLAST of CmoCh04G007680 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G23550.17.7e-3740.50 WRKY family transcription factor[more]
AT5G52830.11.0e-3349.67 WRKY DNA-binding protein 27[more]
AT4G01250.11.4e-3334.04 WRKY family transcription factor[more]
AT2G34830.13.7e-3161.06 WRKY DNA-binding protein 35[more]
AT1G30650.15.3e-3058.41 WRKY DNA-binding protein 14[more]
BLAST of CmoCh04G007680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|525506973|ref|NP_001267532.1|1.2e-7966.08WRKY transcription factor 22-like [Cucumis sativus][more]
gi|659102203|ref|XP_008452006.1|7.6e-7965.61PREDICTED: probable WRKY transcription factor 29 [Cucumis melo][more]
gi|694433116|ref|XP_009343870.1|1.4e-4546.98PREDICTED: probable WRKY transcription factor 29 isoform X2 [Pyrus x bretschneid... [more]
gi|694433114|ref|XP_009343869.1|3.2e-4546.78PREDICTED: probable WRKY transcription factor 29 isoform X1 [Pyrus x bretschneid... [more]
gi|694371827|ref|XP_009363390.1|4.2e-4546.78PREDICTED: probable WRKY transcription factor 29 [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003657WRKY_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0010200 response to chitin
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G007680.1CmoCh04G007680.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003657WRKY domainGENE3DG3DSA:2.20.25.80coord: 105..180
score: 4.6
IPR003657WRKY domainPFAMPF03106WRKYcoord: 121..177
score: 9.9
IPR003657WRKY domainSMARTSM00774WRKY_clscoord: 119..179
score: 2.0
IPR003657WRKY domainPROFILEPS50811WRKYcoord: 114..180
score: 32
IPR003657WRKY domainunknownSSF118290WRKY DNA-binding domaincoord: 117..180
score: 2.62
NoneNo IPR availablePANTHERPTHR32096FAMILY NOT NAMEDcoord: 1..224
score: 2.8
NoneNo IPR availablePANTHERPTHR32096:SF30SUBFAMILY NOT NAMEDcoord: 1..224
score: 2.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G007680Cucsa.106960Cucumber (Gy14) v1cgycmoB0245
CmoCh04G007680CmaCh16G005800Cucurbita maxima (Rimu)cmacmoB337
CmoCh04G007680CmaCh04G007240Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G007680Csa4G050120Cucumber (Chinese Long) v2cmocuB705
CmoCh04G007680MELO3C016338Melon (DHL92) v3.5.1cmomeB686
CmoCh04G007680ClCG07G007870Watermelon (Charleston Gray)cmowcgB670
CmoCh04G007680CSPI04G05940Wild cucumber (PI 183967)cmocpiB715
CmoCh04G007680Lsi07G009040Bottle gourd (USVL1VR-Ls)cmolsiB694
CmoCh04G007680Cp4.1LG01g00250Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G007680Cp4.1LG14g02220Cucurbita pepo (Zucchini)cmocpeB667
CmoCh04G007680MELO3C016338.2Melon (DHL92) v3.6.1cmomedB779
CmoCh04G007680MELO3C006081.2Melon (DHL92) v3.6.1cmomedB773
CmoCh04G007680CsaV3_4G006110Cucumber (Chinese Long) v3cmocucB0833
CmoCh04G007680CsaV3_3G008610Cucumber (Chinese Long) v3cmocucB0821
CmoCh04G007680CsaV3_5G001010Cucumber (Chinese Long) v3cmocucB0870
CmoCh04G007680Cla97C07G135040Watermelon (97103) v2cmowmbB748
CmoCh04G007680Cla97C05G081570Watermelon (97103) v2cmowmbB733
CmoCh04G007680Bhi01G001787Wax gourdcmowgoB0843
CmoCh04G007680CsGy4G005820Cucumber (Gy14) v2cgybcmoB521
CmoCh04G007680Carg14121Silver-seed gourdcarcmoB1259
CmoCh04G007680Carg22217Silver-seed gourdcarcmoB0804
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh04G007680CmoCh16G006300Cucurbita moschata (Rifu)cmocmoB285
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G007680Cucurbita pepo (Zucchini)cmocpeB661
CmoCh04G007680Bottle gourd (USVL1VR-Ls)cmolsiB611
CmoCh04G007680Cucumber (Gy14) v2cgybcmoB639
CmoCh04G007680Melon (DHL92) v3.6.1cmomedB717
CmoCh04G007680Cucumber (Chinese Long) v3cmocucB0860
CmoCh04G007680Watermelon (97103) v2cmowmbB677
CmoCh04G007680Watermelon (97103) v2cmowmbB744
CmoCh04G007680Cucurbita moschata (Rifu)cmocmoB264
CmoCh04G007680Cucumber (Gy14) v1cgycmoB0833
CmoCh04G007680Cucurbita maxima (Rimu)cmacmoB311
CmoCh04G007680Wild cucumber (PI 183967)cmocpiB734
CmoCh04G007680Cucumber (Chinese Long) v2cmocuB728
CmoCh04G007680Melon (DHL92) v3.5.1cmomeB628
CmoCh04G007680Watermelon (Charleston Gray)cmowcgB637
CmoCh04G007680Watermelon (97103) v1cmowmB671