CmoCh04G006980 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G006980
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ring E3 ubiquitin ligase
Location	Cmo_Chr04 : 3461953 .. 3463398 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATACCCACCAGAATGGGAAGAACCCAGCCTCCATAGGTGGATTACGAGAAGGACCTCCGATCAGTGACGAGGGTACATGGGACGAAAGTGCATACGCTCAAATCAGACTTTATAAGCCTAATTTTTGTTATTGCTGTTGCAGACAAATTTGGTCTGTTGTTTTCGTGTGGGAACTACATTTATATGTTTGCATCAGAACCATATTTATATGTCTGTGTTCCTACTTTATGATATGGTCGGGTTTGCAGGCTGGAGTCTAATAATGTCCCATTTAGAAATTTCAGGGATGATGAATTTGAACTGGATCTAGAGGACATAATGGTGATGGAAGCAATCTGGCTCTCAATTCAGGTAAAAATAGCTCACCCATATATGGTACAACTGTTCTTGTTTTTCTTGTTTTGTTAATCTTTAGTTTGATTAAAGTGCATAATAATTGAAATGTTCAGGAGAAAGGAAGGCATCAAGATCCAGTTTACACTGAGGCTGCTTCCTCTGATCAATATCCGACAGAAGGTCGATATGTCTCTCCGACCACCGTTCCATTAGCTGGAACATCATCTTCATCATCATCATCATCCCCATCTGGAGGTCTTGTTTGTGCCATGGCTGCTCTTGCAGAGCAGCAGCAGATAGGCAGGGGACCGTTATCGACTTGCGCAAATGGAGATTCACCCGTCTTCAATATGCTTCCTGGAGCCACGGAGTTCTACAACAGGATGAACACCAATGTAGAAAACTATCCACCCCTACAAATCTCAATCAACACAGAAAATTATACGCCTGCACAACTCTCTATCAACACGGTACCGATACCAGATTGTAGGATGATCTTAACAAGAAACGGTGGCGAGTGGAATCTGGACAATCAATCTGAAGAAGATGAAGCTGGGACAAGCTACCCAACCTCCGACTCGACCGAAGATAATGGTATTGACTGTGCCTTGCCCACAGTCCATGCGATTGATGGTGGAAACCAAACACCAATACCCATCATGCCTCAGAACTTTGAGGAGCAGATGATGCTAGCCATGGCTGTTTCTCTAGCCGAGGCTCGGGGAGTGTCTACTGGACCCGGGCATTCCTGGCAGCAGTGATTATGATTATGATTACGATTACGATTACGATCGAATCTTAACTTGAACATTCGGTTGTAGCCAATACCAACATAGCTGGCAGAGAGAGCGCGTTGGTGTCGCATCCGAGCTGCAAGGTAGGAAATCGACACAAGGAGTGGCGTGATGTTTGTTCAAAGGTTGATCTCCCTCGGCGGGTCGGGTGAAAAAAAGAAAAAGAAGTGTAAAAATGGAATACAAATTCTTTTAGTGAATTAAAATTTGGGTGGTTCATTCAAGTTCATGGATGGATGGATGGCAATATTTCCCCTTTTCTTTTCCTAATTATTGAAAATATTGTTTCAGCTTGTGGAAGTTTATAGTCCC

mRNA sequence

ATGGATACCCACCAGAATGGGAAGAACCCAGCCTCCATAGGTGGATTACGAGAAGGACCTCCGATCAGTGACGAGGACAAATTTGGTCTGTTGTTTTCGTGTGGGAACTACATTTATATGCTGGAGTCTAATAATGTCCCATTTAGAAATTTCAGGGATGATGAATTTGAACTGGATCTAGAGGACATAATGGTGATGGAAGCAATCTGGCTCTCAATTCAGGAGAAAGGAAGGCATCAAGATCCAGTTTACACTGAGGCTGCTTCCTCTGATCAATATCCGACAGAAGGTCGATATGTCTCTCCGACCACCGTTCCATTAGCTGGAACATCATCTTCATCATCATCATCATCCCCATCTGGAGGTCTTGTTTGTGCCATGGCTGCTCTTGCAGAGCAGCAGCAGATAGGCAGGGGACCGTTATCGACTTGCGCAAATGGAGATTCACCCGTCTTCAATATGCTTCCTGGAGCCACGGAGTTCTACAACAGGATGAACACCAATGTAGAAAACTATCCACCCCTACAAATCTCAATCAACACAGAAAATTATACGCCTGCACAACTCTCTATCAACACGGTACCGATACCAGATTGTAGGATGATCTTAACAAGAAACGGTGGCGAGTGGAATCTGGACAATCAATCTGAAGAAGATGAAGCTGGGACAAGCTACCCAACCTCCGACTCGACCGAAGATAATGGTATTGACTGTGCCTTGCCCACAGTCCATGCGATTGATGGTGGAAACCAAACACCAATACCCATCATGCCTCAGAACTTTGAGGAGCAGATGATGCTAGCCATGGCTGTTTCTCTAGCCGAGGCTCGGGGAGTGTCTACTGGACCCGGGCATTCCTGGCAGCAGTGATTATGATTATGATTACGATTACGATTACGATCGAATCTTAACTTGAACATTCGGTTGTAGCCAATACCAACATAGCTGGCAGAGAGAGCGCGTTGGTGTCGCATCCGAGCTGCAAGGTAGGAAATCGACACAAGGAGTGGCGTGATGTTTGTTCAAAGGTTGATCTCCCTCGGCGGGTCGGGTGAAAAAAAGAAAAAGAAGTGTAAAAATGGAATACAAATTCTTTTAGTGAATTAAAATTTGGGTGGTTCATTCAAGTTCATGGATGGATGGATGGCAATATTTCCCCTTTTCTTTTCCTAATTATTGAAAATATTGTTTCAGCTTGTGGAAGTTTATAGTCCC

Coding sequence (CDS)

ATGGATACCCACCAGAATGGGAAGAACCCAGCCTCCATAGGTGGATTACGAGAAGGACCTCCGATCAGTGACGAGGACAAATTTGGTCTGTTGTTTTCGTGTGGGAACTACATTTATATGCTGGAGTCTAATAATGTCCCATTTAGAAATTTCAGGGATGATGAATTTGAACTGGATCTAGAGGACATAATGGTGATGGAAGCAATCTGGCTCTCAATTCAGGAGAAAGGAAGGCATCAAGATCCAGTTTACACTGAGGCTGCTTCCTCTGATCAATATCCGACAGAAGGTCGATATGTCTCTCCGACCACCGTTCCATTAGCTGGAACATCATCTTCATCATCATCATCATCCCCATCTGGAGGTCTTGTTTGTGCCATGGCTGCTCTTGCAGAGCAGCAGCAGATAGGCAGGGGACCGTTATCGACTTGCGCAAATGGAGATTCACCCGTCTTCAATATGCTTCCTGGAGCCACGGAGTTCTACAACAGGATGAACACCAATGTAGAAAACTATCCACCCCTACAAATCTCAATCAACACAGAAAATTATACGCCTGCACAACTCTCTATCAACACGGTACCGATACCAGATTGTAGGATGATCTTAACAAGAAACGGTGGCGAGTGGAATCTGGACAATCAATCTGAAGAAGATGAAGCTGGGACAAGCTACCCAACCTCCGACTCGACCGAAGATAATGGTATTGACTGTGCCTTGCCCACAGTCCATGCGATTGATGGTGGAAACCAAACACCAATACCCATCATGCCTCAGAACTTTGAGGAGCAGATGATGCTAGCCATGGCTGTTTCTCTAGCCGAGGCTCGGGGAGTGTCTACTGGACCCGGGCATTCCTGGCAGCAGTGA

Homology

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BLAST of CmoCh04G006980 vs. TrEMBL
Match: A0A0A0L0A5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G075220 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.5e-90
Identity = 174/218 (79.82%), Postives = 189/218 (86.70%), Query Frame = 1


Query: 73  IQEKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSSSSSPSGGLVCAMAALAE 132
           + EKGR++DPVY EAASSDQY TEGRYVSP T+PLAGTSSS     PSGGL CA+AALAE
Sbjct: 4   LSEKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSS-----PSGGLACAIAALAE 63

Query: 133 QQQIGRGPLSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPLQISINTENYTPAQLS-I 192
           QQQIGRGP STC NGDSPVF MLPGATEFYNRMNTNVENYPP Q SI+ ENY PAQ+S +
Sbjct: 64  QQQIGRGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTV 123

Query: 193 NTVPIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCALPTVHAIDGGNQ 252
           +TV  PDCRMILTRN GEWNLD+QSEE EAGTSYPTSD  EDN  +CALPTV+A+DGGNQ
Sbjct: 124 DTV--PDCRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQ 183

Query: 253 TPIPIMPQNFEEQMMLAMAVSLAEARGVSTGPGHSWQQ 290
             IPI+PQNFEEQMMLAMAVSLAEAR VSTGPGHSWQ+
Sbjct: 184 ATIPIIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 214

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BLAST of CmoCh04G006980 vs. TrEMBL
Match: W9REB0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022476 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 5.5e-56
Identity = 132/243 (54.32%), Postives = 165/243 (67.90%), Query Frame = 1


Query: 47  PFRNFRDDEFELDLEDIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGRYVSPTTVP 106
           P R  R+DEF+LDLEDIMV+EAIWLSIQE GR++     +A SS QY TE  YVSP+  P
Sbjct: 186 PLRAHREDEFDLDLEDIMVIEAIWLSIQESGRNKTSNIVDAPSSGQYVTEDCYVSPSLAP 245

Query: 107 LAGTSSSSSSSSPSGGLVCAMAALAEQQQIGRGPLSTCANGDSPVFNMLPGATEFYNRMN 166
           +AG   SSSSSSPSGGL CA+AALAE+QQ+G G  ST   G+   FNM+PGA+ FYNR +
Sbjct: 246 VAG---SSSSSSPSGGLACAIAALAERQQMG-GESSTNPGGNGSAFNMVPGASRFYNRAD 305

Query: 167 TNVENYPPLQISINTENYTPAQLSINTVPIPDCRMILTRNGGEWNLDNQSEEDEAGTSYP 226
            + E YPP   ++N           +T   P C M L R+  EWN+D+ SE  EAGTSY 
Sbjct: 306 RDAETYPP---AVN-----------STAVSPKCAMALPRDDREWNIDHGSEVAEAGTSYA 365

Query: 227 TSDSTEDNGIDCALPTVHAIDGGNQ-TPIPIMPQNFEEQMMLAMAVSLAEARGVSTGPGH 286
           +SD+ ED G   ALP  + I+G  Q  P PI+P++FEEQMMLAMA+SLAEAR ++ G G 
Sbjct: 366 SSDAAEDAGSMSALPPPNQIEGNLQNVPEPIVPESFEEQMMLAMALSLAEARAMAGGQGV 410

Query: 287 SWQ 289
           +WQ
Sbjct: 426 TWQ 410

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BLAST of CmoCh04G006980 vs. TrEMBL
Match: V4T5F1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020251mg PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 3.0e-54
Identity = 133/247 (53.85%), Postives = 159/247 (64.37%), Query Frame = 1


Query: 53  DDEFELDLEDIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGTSS 112
           DDEF+LDLEDIMVMEAIWLSIQE GR ++P Y EAA S+QY TE RYVS T  P+AG   
Sbjct: 202 DDEFDLDLEDIMVMEAIWLSIQENGRQRNPTYEEAAPSEQYVTEDRYVSSTMAPIAG--- 261

Query: 113 SSSSSSPSGGLVCAMAALAEQQQIGRGPLSTCANGDSPVFNMLPGATEFYNRMNTNVENY 172
             SSSSPSGGL CA+AALAE+QQ+  G  S    G+   FNM PG++  YNRM+ +VENY
Sbjct: 262 --SSSSPSGGLACAIAALAERQQVS-GESSINHGGNMSSFNMFPGSSRLYNRMDHDVENY 321

Query: 173 PPLQISINTENYTPAQLSINTVPIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPTSDSTE 232
            P +  INT               PD RM + R+ GEW +D  SE  EAGTSY +SD  E
Sbjct: 322 APAESLINTS--------------PDGRMTVARDEGEWGIDRGSELAEAGTSYASSDMAE 381

Query: 233 DNGIDCALPT----VHAID-----GGN--QTPIPIMPQNFEEQMMLAMAVSLAEARGVST 289
           D G   +LP     + ++      GGN    P PI+P++FEEQMMLAMA SLAEAR +S 
Sbjct: 382 DGGGISSLPEDGGGISSLSPTEEIGGNFQNVPGPIVPESFEEQMMLAMAASLAEARPMSN 428

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BLAST of CmoCh04G006980 vs. TrEMBL
Match: V4VR33_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020251mg PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 3.0e-54
Identity = 133/247 (53.85%), Postives = 159/247 (64.37%), Query Frame = 1


Query: 53  DDEFELDLEDIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGTSS 112
           DDEF+LDLEDIMVMEAIWLSIQE GR ++P Y EAA S+QY TE RYVS T  P+AG   
Sbjct: 107 DDEFDLDLEDIMVMEAIWLSIQENGRQRNPTYEEAAPSEQYVTEDRYVSSTMAPIAG--- 166

Query: 113 SSSSSSPSGGLVCAMAALAEQQQIGRGPLSTCANGDSPVFNMLPGATEFYNRMNTNVENY 172
             SSSSPSGGL CA+AALAE+QQ+  G  S    G+   FNM PG++  YNRM+ +VENY
Sbjct: 167 --SSSSPSGGLACAIAALAERQQVS-GESSINHGGNMSSFNMFPGSSRLYNRMDHDVENY 226

Query: 173 PPLQISINTENYTPAQLSINTVPIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPTSDSTE 232
            P +  INT               PD RM + R+ GEW +D  SE  EAGTSY +SD  E
Sbjct: 227 APAESLINTS--------------PDGRMTVARDEGEWGIDRGSELAEAGTSYASSDMAE 286

Query: 233 DNGIDCALPT----VHAID-----GGN--QTPIPIMPQNFEEQMMLAMAVSLAEARGVST 289
           D G   +LP     + ++      GGN    P PI+P++FEEQMMLAMA SLAEAR +S 
Sbjct: 287 DGGGISSLPEDGGGISSLSPTEEIGGNFQNVPGPIVPESFEEQMMLAMAASLAEARPMSN 333

[Close]

BLAST of CmoCh04G006980 vs. TrEMBL
Match: B9GGW3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s38730g PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 8.2e-52
Identity = 127/242 (52.48%), Postives = 155/242 (64.05%), Query Frame = 1


Query: 52  RDDEFELDLEDIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGRYVSPTTV-PLAGT 111
           RDDEF+LDLEDIMVMEAIWLSIQE GR ++P+  +AA   QY  E RYV+P    PLAG 
Sbjct: 202 RDDEFDLDLEDIMVMEAIWLSIQENGRQKNPLCGDAAPPAQYTMEARYVTPAMAPPLAG- 261

Query: 112 SSSSSSSSPSGGLVCAMAALAEQQQIGRGPLSTCANGDSPVFNMLPGATEFYNRMNTNVE 171
               SSSSPSGGL CA+AALAE+QQ G G      +G+ P FNMLP  + FYNR+  + +
Sbjct: 262 ----SSSSPSGGLACAIAALAERQQTG-GESIVHNSGNMPSFNMLPSTSSFYNRLEQDAD 321

Query: 172 NYPPLQISINTENYTPAQLSINTVPIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPTSDS 231
           NY P Q S N               +PDCRMI+TR+ GEW  D  S+  EAGTSY +S++
Sbjct: 322 NYSPAQSSSNV--------------LPDCRMIVTRDDGEWGADRGSDAAEAGTSYASSET 381

Query: 232 TED-NGIDCAL---PTVHAIDGGNQTPIPIMPQNFEEQMMLAMAVSLAEARGVSTGPGHS 289
            ED  GI   L   P    I G  Q     +P++FEEQMMLAMAVSLAEAR +++GP  +
Sbjct: 382 AEDAGGISSLLPPPPPTDEIGGSFQNVSGPIPESFEEQMMLAMAVSLAEARAMTSGPQSA 423

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BLAST of CmoCh04G006980 vs. TAIR10
Match: AT1G78420.1 (AT1G78420.1 RING/U-box superfamily protein)

HSP 1 Score: 87.4 bits (215), Expect = 1.5e-17
Identity = 76/236 (32.20%), Postives = 114/236 (48.31%), Query Frame = 1


Query: 49  RNFRDDEFELDLEDIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGR-YVS--PTTV 108
           R  R+DE ++DLE++MVMEAIWLS+QE G  ++    E  SS QY T+   YVS  P   
Sbjct: 201 RGNREDEVDVDLEELMVMEAIWLSVQETGTQRNSASGEITSSRQYVTDNHSYVSSPPRVT 260

Query: 109 PLAGTSSSSSSSSPSGGLVCAMAALAEQQQIGRGPLSTCANGDSPVFNMLPGATEFYNRM 168
           P+   ++ SSSS   GGL CA++ALAE+Q +G                    ++   +  
Sbjct: 261 PIVEPATPSSSS---GGLSCAISALAERQMVGE-------------------SSSHNHNH 320

Query: 169 NTNVENYPPLQISINTENYTPAQLSINTVPIPDCRMILTRNGGEWNLDNQSEEDEAGTSY 228
           N NV +Y  L    N ++Y   +  ++ +           N        +  E  +  SY
Sbjct: 321 NVNVSSYSMLPG--NCDSYYDIEQEVDGID----------NHHHHRHHYEMGETGSSNSY 380

Query: 229 PTSDSTEDNGIDCALPTVHAIDGGNQTPIPIMPQNFEEQMMLAMAVSLAEARGVST 282
            +S  T +   +   P           P+ I+P++FEEQMM+AMAVS+AE    +T
Sbjct: 381 VSSYMTGEGFHNFPPPP----------PLVIVPESFEEQMMMAMAVSMAEVHATTT 392

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BLAST of CmoCh04G006980 vs. TAIR10
Match: AT1G17145.1 (AT1G17145.1 RING/U-box superfamily protein)

HSP 1 Score: 69.7 bits (169), Expect = 3.3e-12
Identity = 51/123 (41.46%), Postives = 68/123 (55.28%), Query Frame = 1


Query: 52  RDDEFELDLEDIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGTS 111
           RD +F+ DLEDIMVMEAIWLS+QE G  ++       S D    + R   P+T       
Sbjct: 201 RDGQFDFDLEDIMVMEAIWLSMQEPGIQRN------TSPDDISEKDRNEEPST------- 260

Query: 112 SSSSSSSPSGGLVCAMAALAEQQQIGRGPLSTCANGDSPVFNMLP--GATEFYNRMNTNV 171
              SSSSPSGGL CA+A LAE+QQ+  G  S+  N +    N++P  G    YN +  + 
Sbjct: 261 --PSSSSPSGGLACAIAVLAERQQM-VGVSSSNQNVNLASQNLVPDNGNNSHYNAIEQDS 307

Query: 172 ENY 173
            +Y
Sbjct: 321 NHY 307

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BLAST of CmoCh04G006980 vs. NCBI nr
Match: gi|659101778|ref|XP_008451788.1| (PREDICTED: uncharacterized protein LOC103492971 isoform X1 [Cucumis melo])

HSP 1 Score: 398.7 bits (1023), Expect = 8.9e-108
Identity = 214/295 (72.54%), Postives = 235/295 (79.66%), Query Frame = 1


Query: 3   THQNGK-NPASIGGLREGPPISDEDKFGLLFSCGNYI------YMLESNNVPFRNFRDDE 62
           T +NG+ NPA+    +   P  DE+   L   C   I        + SN    RNFRDDE
Sbjct: 162 TVENGEDNPAAAPSSQS--PAEDEEIVSLQDPCMTPIRPPPPPIPIRSN----RNFRDDE 221

Query: 63  FELDLEDIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSS 122
           F+LDLEDIMVMEAIWLSIQEKGRH+DPVY EAASSDQY TEGRYVSP T+PLAGTSSS  
Sbjct: 222 FDLDLEDIMVMEAIWLSIQEKGRHKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSS-- 281

Query: 123 SSSPSGGLVCAMAALAEQQQIGRGPLSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPL 182
              PSGGL CA+AALAEQQQI RGP S C NGDSPVFNMLPGATEFYNRMNTNVENYPP 
Sbjct: 282 ---PSGGLACAIAALAEQQQISRGPSSACTNGDSPVFNMLPGATEFYNRMNTNVENYPPT 341

Query: 183 QISINTENYTPAQLS-INTVPIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDN 242
           Q+SI+ ENY PAQ+S ++TV  PDCRMILTRN GEWNLD+QSEE EAGTSYPTSDS EDN
Sbjct: 342 QVSISAENYAPAQVSAVDTV--PDCRMILTRNDGEWNLDHQSEEAEAGTSYPTSDSNEDN 401

Query: 243 GIDCALPTVHAIDGGNQTPIPIMPQNFEEQMMLAMAVSLAEARGVSTGPGHSWQQ 290
             +CALPTV+A+DGGNQ  IPI+PQNFEEQMMLAMAVSLAEAR VSTGPGHSWQ+
Sbjct: 402 STECALPTVNAMDGGNQATIPIIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 443

[Close]

BLAST of CmoCh04G006980 vs. NCBI nr
Match: gi|659101784|ref|XP_008451791.1| (PREDICTED: uncharacterized protein LOC103492971 isoform X2 [Cucumis melo])

HSP 1 Score: 397.5 bits (1020), Expect = 2.0e-107
Identity = 211/289 (73.01%), Postives = 233/289 (80.62%), Query Frame = 1


Query: 3   THQNGK-NPASIGGLREGPPISDEDKFGLLFSCGNYIYMLESNNVPFRNFRDDEFELDLE 62
           T +NG+ NPA+    +   P  DE+   L   C   I       +P R+ RDDEF+LDLE
Sbjct: 162 TVENGEDNPAAAPSSQS--PAEDEEIVSLQDPCMTPIRP-PPPPIPIRSNRDDEFDLDLE 221

Query: 63  DIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSSSSSPSG 122
           DIMVMEAIWLSIQEKGRH+DPVY EAASSDQY TEGRYVSP T+PLAGTSSS     PSG
Sbjct: 222 DIMVMEAIWLSIQEKGRHKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSS-----PSG 281

Query: 123 GLVCAMAALAEQQQIGRGPLSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPLQISINT 182
           GL CA+AALAEQQQI RGP S C NGDSPVFNMLPGATEFYNRMNTNVENYPP Q+SI+ 
Sbjct: 282 GLACAIAALAEQQQISRGPSSACTNGDSPVFNMLPGATEFYNRMNTNVENYPPTQVSISA 341

Query: 183 ENYTPAQLS-INTVPIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCAL 242
           ENY PAQ+S ++TV  PDCRMILTRN GEWNLD+QSEE EAGTSYPTSDS EDN  +CAL
Sbjct: 342 ENYAPAQVSAVDTV--PDCRMILTRNDGEWNLDHQSEEAEAGTSYPTSDSNEDNSTECAL 401

Query: 243 PTVHAIDGGNQTPIPIMPQNFEEQMMLAMAVSLAEARGVSTGPGHSWQQ 290
           PTV+A+DGGNQ  IPI+PQNFEEQMMLAMAVSLAEAR VSTGPGHSWQ+
Sbjct: 402 PTVNAMDGGNQATIPIIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 440

[Close]

BLAST of CmoCh04G006980 vs. NCBI nr
Match: gi|659101786|ref|XP_008451792.1| (PREDICTED: uncharacterized protein LOC103492971 isoform X3 [Cucumis melo])

HSP 1 Score: 396.4 bits (1017), Expect = 4.4e-107
Identity = 200/242 (82.64%), Postives = 215/242 (88.84%), Query Frame = 1


Query: 49  RNFRDDEFELDLEDIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLA 108
           RNFRDDEF+LDLEDIMVMEAIWLSIQEKGRH+DPVY EAASSDQY TEGRYVSP T+PLA
Sbjct: 202 RNFRDDEFDLDLEDIMVMEAIWLSIQEKGRHKDPVYAEAASSDQYATEGRYVSPATIPLA 261

Query: 109 GTSSSSSSSSPSGGLVCAMAALAEQQQIGRGPLSTCANGDSPVFNMLPGATEFYNRMNTN 168
           GTSSS     PSGGL CA+AALAEQQQI RGP S C NGDSPVFNMLPGATEFYNRMNTN
Sbjct: 262 GTSSS-----PSGGLACAIAALAEQQQISRGPSSACTNGDSPVFNMLPGATEFYNRMNTN 321

Query: 169 VENYPPLQISINTENYTPAQLS-INTVPIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPT 228
           VENYPP Q+SI+ ENY PAQ+S ++TV  PDCRMILTRN GEWNLD+QSEE EAGTSYPT
Sbjct: 322 VENYPPTQVSISAENYAPAQVSAVDTV--PDCRMILTRNDGEWNLDHQSEEAEAGTSYPT 381

Query: 229 SDSTEDNGIDCALPTVHAIDGGNQTPIPIMPQNFEEQMMLAMAVSLAEARGVSTGPGHSW 288
           SDS EDN  +CALPTV+A+DGGNQ  IPI+PQNFEEQMMLAMAVSLAEAR VSTGPGHSW
Sbjct: 382 SDSNEDNSTECALPTVNAMDGGNQATIPIIPQNFEEQMMLAMAVSLAEAREVSTGPGHSW 436

Query: 289 QQ 290
           Q+
Sbjct: 442 QE 436

[Close]

BLAST of CmoCh04G006980 vs. NCBI nr
Match: gi|778691423|ref|XP_011653274.1| (PREDICTED: uncharacterized protein LOC101215345 isoform X1 [Cucumis sativus])

HSP 1 Score: 393.3 bits (1009), Expect = 3.7e-106
Identity = 212/295 (71.86%), Postives = 235/295 (79.66%), Query Frame = 1


Query: 3   THQNGKN-PASIGGLREGPPISDEDKFGLLFSCGNYI------YMLESNNVPFRNFRDDE 62
           T +NG++ PA++   +   P  DE+   L   C   I        + SN    RNFRDDE
Sbjct: 162 TVENGEDSPAAVPSSQS--PAEDEEIVSLQDPCMTQIRPPPPPIPIRSN----RNFRDDE 221

Query: 63  FELDLEDIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSS 122
           F+LDLEDIMVMEAIWLSIQEKGR++DPVY EAASSDQY TEGRYVSP T+PLAGTSSS  
Sbjct: 222 FDLDLEDIMVMEAIWLSIQEKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSS-- 281

Query: 123 SSSPSGGLVCAMAALAEQQQIGRGPLSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPL 182
              PSGGL CA+AALAEQQQIGRGP STC NGDSPVF MLPGATEFYNRMNTNVENYPP 
Sbjct: 282 ---PSGGLACAIAALAEQQQIGRGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPT 341

Query: 183 QISINTENYTPAQLS-INTVPIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDN 242
           Q SI+ ENY PAQ+S ++TV  PDCRMILTRN GEWNLD+QSEE EAGTSYPTSD  EDN
Sbjct: 342 QGSISAENYAPAQVSTVDTV--PDCRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDN 401

Query: 243 GIDCALPTVHAIDGGNQTPIPIMPQNFEEQMMLAMAVSLAEARGVSTGPGHSWQQ 290
             +CALPTV+A+DGGNQ  IPI+PQNFEEQMMLAMAVSLAEAR VSTGPGHSWQ+
Sbjct: 402 STECALPTVNAMDGGNQATIPIIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 443

[Close]

BLAST of CmoCh04G006980 vs. NCBI nr
Match: gi|449438951|ref|XP_004137251.1| (PREDICTED: uncharacterized protein LOC101215345 isoform X2 [Cucumis sativus])

HSP 1 Score: 392.1 bits (1006), Expect = 8.3e-106
Identity = 209/289 (72.32%), Postives = 233/289 (80.62%), Query Frame = 1


Query: 3   THQNGKN-PASIGGLREGPPISDEDKFGLLFSCGNYIYMLESNNVPFRNFRDDEFELDLE 62
           T +NG++ PA++   +   P  DE+   L   C   I       +P R+ RDDEF+LDLE
Sbjct: 162 TVENGEDSPAAVPSSQS--PAEDEEIVSLQDPCMTQIRP-PPPPIPIRSNRDDEFDLDLE 221

Query: 63  DIMVMEAIWLSIQEKGRHQDPVYTEAASSDQYPTEGRYVSPTTVPLAGTSSSSSSSSPSG 122
           DIMVMEAIWLSIQEKGR++DPVY EAASSDQY TEGRYVSP T+PLAGTSSS     PSG
Sbjct: 222 DIMVMEAIWLSIQEKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSS-----PSG 281

Query: 123 GLVCAMAALAEQQQIGRGPLSTCANGDSPVFNMLPGATEFYNRMNTNVENYPPLQISINT 182
           GL CA+AALAEQQQIGRGP STC NGDSPVF MLPGATEFYNRMNTNVENYPP Q SI+ 
Sbjct: 282 GLACAIAALAEQQQIGRGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISA 341

Query: 183 ENYTPAQLS-INTVPIPDCRMILTRNGGEWNLDNQSEEDEAGTSYPTSDSTEDNGIDCAL 242
           ENY PAQ+S ++TV  PDCRMILTRN GEWNLD+QSEE EAGTSYPTSD  EDN  +CAL
Sbjct: 342 ENYAPAQVSTVDTV--PDCRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECAL 401

Query: 243 PTVHAIDGGNQTPIPIMPQNFEEQMMLAMAVSLAEARGVSTGPGHSWQQ 290
           PTV+A+DGGNQ  IPI+PQNFEEQMMLAMAVSLAEAR VSTGPGHSWQ+
Sbjct: 402 PTVNAMDGGNQATIPIIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 440

The following BLAST results are available for this feature:

BLAST of CmoCh04G006980 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G006980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0A5_CUCSA	1.5e-90	79.82	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G075220 PE=4 SV=1	[more]
W9REB0_9ROSA	5.5e-56	54.32	Uncharacterized protein OS=Morus notabilis GN=L484_022476 PE=4 SV=1	[more]
V4T5F1_9ROSI	3.0e-54	53.85	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020251mg PE=4 SV=1	[more]
V4VR33_9ROSI	3.0e-54	53.85	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020251mg PE=4 SV=1	[more]
B9GGW3_POPTR	8.2e-52	52.48	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s38730g PE=4 SV=1	[more]

BLAST of CmoCh04G006980 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78420.1	1.5e-17	32.20	RING/U-box superfamily protein	[more]
AT1G17145.1	3.3e-12	41.46	RING/U-box superfamily protein	[more]

BLAST of CmoCh04G006980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659101778\|ref\|XP_008451788.1\|	8.9e-108	72.54	PREDICTED: uncharacterized protein LOC103492971 isoform X1 [Cucumis melo]	[more]
gi\|659101784\|ref\|XP_008451791.1\|	2.0e-107	73.01	PREDICTED: uncharacterized protein LOC103492971 isoform X2 [Cucumis melo]	[more]
gi\|659101786\|ref\|XP_008451792.1\|	4.4e-107	82.64	PREDICTED: uncharacterized protein LOC103492971 isoform X3 [Cucumis melo]	[more]
gi\|778691423\|ref\|XP_011653274.1\|	3.7e-106	71.86	PREDICTED: uncharacterized protein LOC101215345 isoform X1 [Cucumis sativus]	[more]
gi\|449438951\|ref\|XP_004137251.1\|	8.3e-106	72.32	PREDICTED: uncharacterized protein LOC101215345 isoform X2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G006980.1	CmoCh04G006980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31315	FAMILY NOT NAMED	coord: 35..287 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G006980	Cucurbita pepo (Zucchini)	cmocpeB670
CmoCh04G006980	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G006980	Bottle gourd (USVL1VR-Ls)	cmolsiB689
CmoCh04G006980	Bottle gourd (USVL1VR-Ls)	cmolsiB696
CmoCh04G006980	Cucumber (Gy14) v2	cgybcmoB515
CmoCh04G006980	Melon (DHL92) v3.6.1	cmomedB787
CmoCh04G006980	Silver-seed gourd	carcmoB0058
CmoCh04G006980	Silver-seed gourd	carcmoB0902
CmoCh04G006980	Cucumber (Chinese Long) v3	cmocucB0827
CmoCh04G006980	Watermelon (97103) v2	cmowmbB756
CmoCh04G006980	Wax gourd	cmowgoB0844
CmoCh04G006980	Cucurbita moschata (Rifu)	cmocmoB288
CmoCh04G006980	Cucumber (Gy14) v1	cgycmoB0756
CmoCh04G006980	Cucurbita maxima (Rimu)	cmacmoB340
CmoCh04G006980	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G006980	Wild cucumber (PI 183967)	cmocpiB707
CmoCh04G006980	Cucumber (Chinese Long) v2	cmocuB699
CmoCh04G006980	Melon (DHL92) v3.5.1	cmomeB693
CmoCh04G006980	Watermelon (Charleston Gray)	cmowcgB677
CmoCh04G006980	Watermelon (97103) v1	cmowmB686