CmoCh04G006880 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAATGAAGTGAAGCTGTTGGATTTCTGGCCCAGCATGTTTGGGATGCGAGTTAGAATAGCTCTGGCCGAGAAGGGCGTGGCGTACGAATACGTGGAAGAAGATCTGAGAAACAAGAGCCCTTTGCTTCTGCAGATGAACCCAATTCACAAGAAAATCCCTGTTCTTGTTCATAATGGAAAACCCATCTCCGAATCTTCCATTATCGTTCAGTACATCGATGAAACGTGGAAGGACAGAGCTCCTCTGTTGCCGTCTGATCCATACGAGAGGGCTCAAGCCAGGTTTTGGGTGGATTTCATCGACAAGAAGGTGACATTCTAAAAACCCTTTACCTGATAGGCCTTAATGACATTCCTAAGCAATGAAAGGGGTATGAAAATGTGTAGCTTTATGATGAAACGAGGAAGACATGGGGGAGCAAGGGAGAGGAGCAGGAGGCAGGGAAGAGGGGGATGATTGCAATTTTGAAGCAACTGGAGGAAGTTCTTGGGGAGAAGGCTTTCTTTGGAGGAGAGTGTTTGGGGTTCCTAGACATTGGTTTGATTGGATTCTCATCTTGGTTTTATAGCTATGAGACCATTGGGAAGTTCAGCATCGAGGCAGAGTGTCCCAAGATCATGGCTTGGGTGAAGAGATGCTTGCAGAAGGAGAGTGTTTCAAAGTCCCTGCCTGACCCCATGAAAGTGTATCCCTTTGTGCTTGAAATTATGAAAGCGCTTGGCCTTGACTAACCAAAAATCTGCACCCTTTTTCATCTGTTCCTTGTTGTTCTAGTCTCGGTCTTGAATAAGTTGTGAAGGATTTGTGTGGGTAATCGATCTATTTTCTAGTGTTTAAGTTTCGGGTGGGTTTTCTTGTTTTCTATCTTGATATAACTAAATCGAAGTTTGTTGACTCAAGCTACGGACTGTAAAATTAAACGTTCAAGAATTTGTTAGACACTCTCCAAAGTTCACGGATCAAATGACGTAACTTGAGGTTGGTAAAAGAGAATATATGGTACAAATATGCATACGGGACCATATTACTAAATGCTAGTCGTACTAAGTTGTCCATATACACTTGAACACTTGTGACTTCCTATCTAACATCATGTTTCATGCCAACATACTCATAATCTATGAGCCTTTAATTTTAAAATGTCTTGTTGTTTAAAAATGTATGAACCCACATGGATTGGAGAAAGAAAGGACGAAATTATCTATATAAATACTTGGGCTCAAGCTCAATCTCTTCTCCATTTCGATTTGTGAGTTTGTTCCCAATTGGCAACAATGGCGGAGGAGGTGAAACTGTTGGATTTTTGGCCCAGCATGTTCGGGATGCGTGTTAGAATAGCTCTGGCTGAGAAGGGCGTGGCCTACGAATATGTGGAACAAGATCTGAAAAACAAGACCCCTTTGCTTCTGGAGATGAATCCAATTCACAAAAAGGTACCTGTTTTTGTTCATAATGGAAAACCCATCAGTGAATCTTCCATTATCATTCAGTACATTGATGAAGTATGGAAAGACAGAGCTCCTCTGTTGCCGTCTGATCCTTACGAGAGGGCTCAAGCCAGGTTCTGGGTGGATTTCATCGACAAGAAGGTGGCATGCTCAAAACCCTTTACCTGATAGGCCTTAATGTTTTCATTGATATTCCCAAGCAATGAATGTATTATCAAACTGTGCAGCTTTACATTGAAACAAGGAAGATATACATGAGCAAGGGAGAAGAGCAGGAGACAGGCAAGAAGGAGGTGATAGCAATTTTGAAGCAAGTGGAAGCAGTTCTTGGGGAGAAGGCCTACTTTGGAGGAGAGTGTTTGGGGTTCATAGACATTGCCTTGATTGGATTCACATCTTGGTTTTATAGCTACGAAACCATTGGGAATTTCAGCATTGAAGCTGAGTGTCCCAAGATCATGGCTTGGGTGAAGAGATGCCTGCAAAAGGAGAGCGTTTCAAGCTCCCTGCCTGACCCCATCAAAGTCATCACTTCTTGCTTCAAGTCAGGAAAGCACTTGGCCTTGACTAACCAAATTGCTTCAGTCAGGAAGGACTTGGTGTGGATCAAAATGGATGAAATTTTTAGTGTTTGTGGTTGGGGTTTTGATATCTTCTCCCACTTTGATGCAGCGTAGTAAGTCATTGAATAAATGACATAGCCAGCCTTATGGTTAGCATTAAAAAGTTTAATTAATCTATAAGTTCTGTTTTTAATAGATTCTTGAGTGCGTTTCCGGTATCAAGAACACGATGAACTGACCCTTGATAGAAATCACTAATCTCCACAATAATTTGATATTGTCCTTAAAATCTTAAACCCGGACTCCCACGTGATCCTTCCTCAAAACAATGAGTCCACACCATGTTGAATGGTCCATAGCATTGGAAGTTGCAGAAAATGGACTCTGTTTTCACCGCATCCTTTCCCCTTTTGTCCTTTCTCTTCTCTCTCCACTATTCCATTTTGTCCCACTTTCTACAAATGGGTCCACTCTCAAACTCACTCTCAATCCCTCAAAACTCATAGCCCTAAAGCGGCGCTCTCCCTTTGAGTTTCATCTTCCCCATTTGGCAACAATGGCAGAGGAAGTGAAGCTCTTGGATTTCTGGCCCAGCATGTTCGGGATGCGAGTCAAAGTAGCCCTGGCCATGAAGGGCGTGGCCTACGAATACGTAGAACAAGATCTAAGAAACAAGAGCCCTCTGCTTCTGGAAATGAACCCAATCCACAAGAAAATCCCTGTTCTTGTTCATAACGGAAAACCCATCTGTGAATCATCCATTATCGTTCAGTACATCGATGAAACGTGGAAGAACAGAGCTCCTCTGTTACCATCTGATCCATACGAGAGGGCTCAGGCCAGGTTTTGGGTGGATTTCATCGACAAGAAGGTTCGGGTGAATTAATGAAAGTTTAGTTCGTTTTGTTCATGGTGTTTGACATTGATAAACAAAAATGCAGGTGTTTGAGAGTGGGAGGAAGATCTGGGCTAGCAAGGGAGAGGAGCGTGAAGAAGGGAAGAAGGAGTTCATGGGAAGCTTGAAGAAGCTGGAGGAAGTTCTTGGGGAGAAGGCTTACTTTGGAGGCGAGAATGTGGGGTTTGTGGACATTGTTTTGATTGGATACTACACCTGGTTTTACAGCTACGAGAGCATTGGGAACTTGAGCGTTGAGGCAGAGTGCTCCAAGATACTGGGATGGGCTAAGAGATGCTTGCAAAATGAGAGCGTTTCTAACTCCCTGCCTGACCCCTTCAAGATCTGTGACTTTGTGCTTCTAATGAAGAAGAAGTATGGCCCTGAATGAATGAATGAACAAACAAACCATGTGTGGACTATCTCTAATGTATTTTGTATGCTGAAATAAATTTGGGGTATTTTGATCTGTTAAATTATGTTCATGTTCATGTTCATATCTTTACTTCAATAAAAAAAAGTTTCGAAATTTTTTACCGTCTTGTTCTCAATTGGCG ATGGCGAATGAAGTGAAGCTGTTGGATTTCTGGCCCAGCATGTTTGGGATGCGAGTTAGAATAGCTCTGGCCGAGAAGGGCGTGGCGTACGAATACGTGGAAGAAGATCTGAGAAACAAGAGCCCTTTGCTTCTGCAGATGAACCCAATTCACAAGAAAATCCCTGTTCTTGTTCATAATGGAAAACCCATCTCCGAATCTTCCATTATCGTTCAGTACATCGATGAAACGTGGAAGGACAGAGCTCCTCTGTTGCCGTCTGATCCATACGAGAGGGCTCAAGCCAGGTTTTGGGTGGATTTCATCGACAAGAAGCTTTATGATGAAACGAGGAAGACATGGGGGAGCAAGGGAGAGGAGCAGGAGGCAGGGAAGAGGGGGATGATTGCAATTTTGAAGCAACTGGAGGAAGTTCTTGGGGAGAAGGCTTTCTTTGGAGGAGAGTGTTTGGGGTTCCTAGACATTGGTTTGATTGGATTCTCATCTTGGTTTTATAGCTATGAGACCATTGGGAAGTTCAGCATCGAGGCAGAGTGTCCCAAGATCATGGCTTGGGTGAAGAGATGCTTGCAGAAGGAGAGTGTTTCAAAGTCCCTGCCTGACCCCATGAAAGTCATGTTCGGGATGCGTGTTAGAATAGCTCTGGCTGAGAAGGGCGTGGCCTACGAATATGTGGAACAAGATCTGAAAAACAAGACCCCTTTGCTTCTGGAGATGAATCCAATTCACAAAAAGGTACCTGTTTTTGTTCATAATGGAAAACCCATCAGTGAATCTTCCATTATCATTCAGTACATTGATGAAGTATGGAAAGACAGAGCTCCTCTGTTGCCGTCTGATCCTTACGAGAGGGCTCAAGCCAGGTTCTGGGTGGATTTCATCGACAAGAAGCTTTACATTGAAACAAGGAAGATATACATGAGCAAGGGAGAAGAGCAGGAGACAGGCAAGAAGGAGGTGATAGCAATTTTGAAGCAAGTGGAAGCAGTTCTTGGGGAGAAGGCCTACTTTGGAGGAGAGTGTTTGGGGTTCATAGACATTGCCTTGATTGGATTCACATCTTGGTTTTATAGCTACGAAACCATTGGGAATTTCAGCATTGAAGCTGAGTGTCCCAAGATCATGGCTTGGGTGAAGAGATGCCTGCAAAAGGAGAGCGTTTCAAGCTCCCTGCCTGACCCCATCAAAGTCATCACTTCTTGCTTCAAGTCAGGAAAGCACTTGGCCTTGACTAACCAAATTGCTTCAGTCAGGAAGGACTTGGTGTGGATCAAAATGGATGAAATTTTTAGTGTTTGTGGTTGGGGTTTTGATATCTTCTCCCACTTTGATGCAGCGTACATGTTCGGGATGCGAGTCAAAGTAGCCCTGGCCATGAAGGGCGTGGCCTACGAATACGTAGAACAAGATCTAAGAAACAAGAGCCCTCTGCTTCTGGAAATGAACCCAATCCACAAGAAAATCCCTGTTCTTGTTCATAACGGAAAACCCATCTGTGAATCATCCATTATCGTTCAGTACATCGATGAAACGTGGAAGAACAGAGCTCCTCTGTTACCATCTGATCCATACGAGAGGGCTCAGGCCAGGTTTTGGGTGGATTTCATCGACAAGAAGGTGTTTGAGAGTGGGAGGAAGATCTGGGCTAGCAAGGGAGAGGAGCGTGAAGAAGGGAAGAAGGAGTTCATGGGAAGCTTGAAGAAGCTGGAGGAAGTTCTTGGGGAGAAGGCTTACTTTGGAGGCGAGAATGTGGGGTTTGTGGACATTGTTTTGATTGGATACTACACCTGGTTTTACAGCTACGAGAGCATTGGGAACTTGAGCGTTGAGGCAGAGTGCTCCAAGATACTGGGATGGGCTAAGAGATGCTTGCAAAATGAGAGCGTTTCTAACTCCCTGCCTGACCCCTTCAAGATCTGTGACTTTGTGCTTCTAATGAAGAAGAAGTATGGCCCTGAATGAATGAATGAACAAACAAACCATGTGTGGACTATCTCTAATGTATTTTGTATGCTGAAATAAATTTGGGGTATTTTGATCTGTTAAATTATGTTCATGTTCATGTTCATATCTTTACTTCAATAAAAAAAAGTTTCGAAATTTTTTACCGTCTTGTTCTCAATTGGCG ATGGCGAATGAAGTGAAGCTGTTGGATTTCTGGCCCAGCATGTTTGGGATGCGAGTTAGAATAGCTCTGGCCGAGAAGGGCGTGGCGTACGAATACGTGGAAGAAGATCTGAGAAACAAGAGCCCTTTGCTTCTGCAGATGAACCCAATTCACAAGAAAATCCCTGTTCTTGTTCATAATGGAAAACCCATCTCCGAATCTTCCATTATCGTTCAGTACATCGATGAAACGTGGAAGGACAGAGCTCCTCTGTTGCCGTCTGATCCATACGAGAGGGCTCAAGCCAGGTTTTGGGTGGATTTCATCGACAAGAAGCTTTATGATGAAACGAGGAAGACATGGGGGAGCAAGGGAGAGGAGCAGGAGGCAGGGAAGAGGGGGATGATTGCAATTTTGAAGCAACTGGAGGAAGTTCTTGGGGAGAAGGCTTTCTTTGGAGGAGAGTGTTTGGGGTTCCTAGACATTGGTTTGATTGGATTCTCATCTTGGTTTTATAGCTATGAGACCATTGGGAAGTTCAGCATCGAGGCAGAGTGTCCCAAGATCATGGCTTGGGTGAAGAGATGCTTGCAGAAGGAGAGTGTTTCAAAGTCCCTGCCTGACCCCATGAAAGTCATGTTCGGGATGCGTGTTAGAATAGCTCTGGCTGAGAAGGGCGTGGCCTACGAATATGTGGAACAAGATCTGAAAAACAAGACCCCTTTGCTTCTGGAGATGAATCCAATTCACAAAAAGGTACCTGTTTTTGTTCATAATGGAAAACCCATCAGTGAATCTTCCATTATCATTCAGTACATTGATGAAGTATGGAAAGACAGAGCTCCTCTGTTGCCGTCTGATCCTTACGAGAGGGCTCAAGCCAGGTTCTGGGTGGATTTCATCGACAAGAAGCTTTACATTGAAACAAGGAAGATATACATGAGCAAGGGAGAAGAGCAGGAGACAGGCAAGAAGGAGGTGATAGCAATTTTGAAGCAAGTGGAAGCAGTTCTTGGGGAGAAGGCCTACTTTGGAGGAGAGTGTTTGGGGTTCATAGACATTGCCTTGATTGGATTCACATCTTGGTTTTATAGCTACGAAACCATTGGGAATTTCAGCATTGAAGCTGAGTGTCCCAAGATCATGGCTTGGGTGAAGAGATGCCTGCAAAAGGAGAGCGTTTCAAGCTCCCTGCCTGACCCCATCAAAGTCATCACTTCTTGCTTCAAGTCAGGAAAGCACTTGGCCTTGACTAACCAAATTGCTTCAGTCAGGAAGGACTTGGTGTGGATCAAAATGGATGAAATTTTTAGTGTTTGTGGTTGGGGTTTTGATATCTTCTCCCACTTTGATGCAGCGTACATGTTCGGGATGCGAGTCAAAGTAGCCCTGGCCATGAAGGGCGTGGCCTACGAATACGTAGAACAAGATCTAAGAAACAAGAGCCCTCTGCTTCTGGAAATGAACCCAATCCACAAGAAAATCCCTGTTCTTGTTCATAACGGAAAACCCATCTGTGAATCATCCATTATCGTTCAGTACATCGATGAAACGTGGAAGAACAGAGCTCCTCTGTTACCATCTGATCCATACGAGAGGGCTCAGGCCAGGTTTTGGGTGGATTTCATCGACAAGAAGGTGTTTGAGAGTGGGAGGAAGATCTGGGCTAGCAAGGGAGAGGAGCGTGAAGAAGGGAAGAAGGAGTTCATGGGAAGCTTGAAGAAGCTGGAGGAAGTTCTTGGGGAGAAGGCTTACTTTGGAGGCGAGAATGTGGGGTTTGTGGACATTGTTTTGATTGGATACTACACCTGGTTTTACAGCTACGAGAGCATTGGGAACTTGAGCGTTGAGGCAGAGTGCTCCAAGATACTGGGATGGGCTAAGAGATGCTTGCAAAATGAGAGCGTTTCTAACTCCCTGCCTGACCCCTTCAAGATCTGTGACTTTGTGCTTCTAATGAAGAAGAAGTATGGCCCTGAATGA
BLAST of CmoCh04G006880 vs. Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 1.7e-85 Identity = 154/213 (72.30%), Postives = 176/213 (82.63%), Query Frame = 1
BLAST of CmoCh04G006880 vs. Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 2.2e-85 Identity = 153/213 (71.83%), Postives = 176/213 (82.63%), Query Frame = 1
BLAST of CmoCh04G006880 vs. Swiss-Prot
Match: GSTUJ_ARATH (Glutathione S-transferase U19 OS=Arabidopsis thaliana GN=GSTU19 PE=1 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 2.4e-84 Identity = 148/205 (72.20%), Postives = 169/205 (82.44%), Query Frame = 1
BLAST of CmoCh04G006880 vs. Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 5.9e-83 Identity = 143/213 (67.14%), Postives = 177/213 (83.10%), Query Frame = 1
BLAST of CmoCh04G006880 vs. Swiss-Prot
Match: GSTUP_ARATH (Glutathione S-transferase U25 OS=Arabidopsis thaliana GN=GSTU25 PE=1 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 7.9e-80 Identity = 136/206 (66.02%), Postives = 166/206 (80.58%), Query Frame = 1
BLAST of CmoCh04G006880 vs. TrEMBL
Match: M0U3L4_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1) HSP 1 Score: 697.2 bits (1798), Expect = 1.9e-197 Identity = 358/678 (52.80%), Postives = 455/678 (67.11%), Query Frame = 1
BLAST of CmoCh04G006880 vs. TrEMBL
Match: A0A103XM80_CYNCS (Glutathione S-transferase/chloride channel, C-terminal OS=Cynara cardunculus var. scolymus GN=Ccrd_004596 PE=3 SV=1) HSP 1 Score: 494.2 bits (1271), Expect = 2.4e-136 Identity = 235/409 (57.46%), Postives = 297/409 (72.62%), Query Frame = 1
BLAST of CmoCh04G006880 vs. TrEMBL
Match: A0A103YKK2_CYNCS (Glutathione S-transferase/chloride channel, C-terminal OS=Cynara cardunculus var. scolymus GN=Ccrd_010740 PE=4 SV=1) HSP 1 Score: 482.6 bits (1241), Expect = 7.4e-133 Identity = 242/424 (57.08%), Postives = 302/424 (71.23%), Query Frame = 1
BLAST of CmoCh04G006880 vs. TrEMBL
Match: F6I510_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0015g02610 PE=3 SV=1) HSP 1 Score: 473.4 bits (1217), Expect = 4.5e-130 Identity = 216/317 (68.14%), Postives = 262/317 (82.65%), Query Frame = 1
BLAST of CmoCh04G006880 vs. TrEMBL
Match: D7KVA3_ARALL (F3F9.11 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_316741 PE=4 SV=1) HSP 1 Score: 471.5 bits (1212), Expect = 1.7e-129 Identity = 232/388 (59.79%), Postives = 280/388 (72.16%), Query Frame = 1
BLAST of CmoCh04G006880 vs. TAIR10
Match: AT1G78380.1 (AT1G78380.1 glutathione S-transferase TAU 19) HSP 1 Score: 314.7 bits (805), Expect = 1.3e-85 Identity = 148/205 (72.20%), Postives = 169/205 (82.44%), Query Frame = 1
BLAST of CmoCh04G006880 vs. TAIR10
Match: AT1G17180.1 (AT1G17180.1 glutathione S-transferase TAU 25) HSP 1 Score: 299.7 bits (766), Expect = 4.5e-81 Identity = 136/206 (66.02%), Postives = 166/206 (80.58%), Query Frame = 1
BLAST of CmoCh04G006880 vs. TAIR10
Match: AT1G78370.1 (AT1G78370.1 glutathione S-transferase TAU 20) HSP 1 Score: 292.0 bits (746), Expect = 9.3e-79 Identity = 135/206 (65.53%), Postives = 159/206 (77.18%), Query Frame = 1
BLAST of CmoCh04G006880 vs. TAIR10
Match: AT1G78340.1 (AT1G78340.1 glutathione S-transferase TAU 22) HSP 1 Score: 280.8 bits (717), Expect = 2.1e-75 Identity = 132/213 (61.97%), Postives = 164/213 (77.00%), Query Frame = 1
BLAST of CmoCh04G006880 vs. TAIR10
Match: AT1G17170.1 (AT1G17170.1 glutathione S-transferase TAU 24) HSP 1 Score: 278.5 bits (711), Expect = 1.1e-74 Identity = 133/206 (64.56%), Postives = 160/206 (77.67%), Query Frame = 1
BLAST of CmoCh04G006880 vs. NCBI nr
Match: gi|8052534|gb|AAF71798.1|AC013430_7 (F3F9.11 [Arabidopsis thaliana]) HSP 1 Score: 495.4 bits (1274), Expect = 1.6e-136 Identity = 241/404 (59.65%), Postives = 288/404 (71.29%), Query Frame = 1
BLAST of CmoCh04G006880 vs. NCBI nr
Match: gi|976905729|gb|KVH93346.1| (Glutathione S-transferase/chloride channel, C-terminal [Cynara cardunculus var. scolymus]) HSP 1 Score: 494.2 bits (1271), Expect = 3.5e-136 Identity = 235/409 (57.46%), Postives = 297/409 (72.62%), Query Frame = 1
BLAST of CmoCh04G006880 vs. NCBI nr
Match: gi|976927037|gb|KVI10866.1| (Glutathione S-transferase/chloride channel, C-terminal [Cynara cardunculus var. scolymus]) HSP 1 Score: 482.6 bits (1241), Expect = 1.1e-132 Identity = 242/424 (57.08%), Postives = 302/424 (71.23%), Query Frame = 1
BLAST of CmoCh04G006880 vs. NCBI nr
Match: gi|297842615|ref|XP_002889189.1| (F3F9.11 [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 471.5 bits (1212), Expect = 2.4e-129 Identity = 232/388 (59.79%), Postives = 280/388 (72.16%), Query Frame = 1
BLAST of CmoCh04G006880 vs. NCBI nr
Match: gi|223544978|gb|EEF46493.1| (glutathione s-transferase, putative [Ricinus communis]) HSP 1 Score: 404.8 bits (1039), Expect = 2.8e-109 Identity = 202/386 (52.33%), Postives = 267/386 (69.17%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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