CmoCh04G006830 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G006830
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Cytochrome b561 and DOMON domain-containing protein
Location	Cmo_Chr04 : 3391542 .. 3392721 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCCTTAGGCAATGCCCTTCTCAGTGTTTGCCTAATTGGATCGCTCATCTCGCAGGCCCAATCCCTCACTTGTTCTTCCCAAACCTTCCCAAAGAGATCCTTCGCCCACTGCGAGGATCTCCCCGAGCTCGGCGCCTTTCTCCACTGGACCCACGACCCCAAAAATTCATCTCTTTCCATCGCCTTCATTGCCACGCCGCCGCACGAGGAGGGATGGGTTGCCTGGGCTGTTAACCCCACCCACACCGGCATGATCGGAGCCCAAGCCCTGATTGCCTCCCAATCTGGAGGCACCCCTTCTGTCCGTACCTTCAACATCTCCTCCTACTCTGTTGTCCTCCCTTCCCACTCCCTATCTTTCCCTGTTTGGGACGTCGCCGCCGAATGCTCCCAGGAGCAGTTCACCATCTTTGCTACTGTAAAGGTTCCAGAGAAGACTAAGTCGTTGAACCAAGTCTGGCAAGTTGGGCCTGGGGTGAATCCCCATTCTGGGATTCCAAAGGTTCATGCCTTTGATTCCTCTAATTTCAATGCCGAAAACGAGTTGGTGTTTGACAAGGAGGGTGGTGCTGATCTTGCCCCACACGCCCACCACGACGCCTCCCCTGCGCCCGAGGCTAGCACCACTGCCGCCTCCGCTTCGAGTGGGGTTGCCCAAATTACAACCAAAAGTATAGGGCTCCTTGTGCCTTATTTTGTATTTATTTGGGGAATTAATAATTTTTTATTTTAATTATTTAACACAAATATTGTTCTTTTTATTTTCTACCTTTTATTTCCCAAATTTTTAAAAAATAATTTGATTTAGTTTTGATTTTTGCATTATTTCCACGAATGGTTCAATATATAACTTAATATTTCACGACAAGACTATGAAAATAAAAATAAAATCAAACGGTAAATAAACTTAAGTAAGTGACTTTACTGCTGGTTTAGTTGGATGAATGAATTATTTGAAACATGGACGGTGCATGTCTTGTACTTGATTTATGTTTGTTTATACTATGGAGCTTGAAATGTTGGTTACGTTATGGAATATCACGTTGACATGTTATGTCTTACATTATGAAAAAACATGAAATGATTATGTTATGAAAGAAAATGTAACCAGTATCATATATATGTCTTAATTTTAAATTATAGTGACCTCATACATATTATACGAGTTTGTATGA

mRNA sequence

ATGGCGTCCTTAGGCAATGCCCTTCTCAGTGTTTGCCTAATTGGATCGCTCATCTCGCAGGCCCAATCCCTCACTTGTTCTTCCCAAACCTTCCCAAAGAGATCCTTCGCCCACTGCGAGGATCTCCCCGAGCTCGGCGCCTTTCTCCACTGGACCCACGACCCCAAAAATTCATCTCTTTCCATCGCCTTCATTGCCACGCCGCCGCACGAGGAGGGATGGGTTGCCTGGGCTGTTAACCCCACCCACACCGGCATGATCGGAGCCCAAGCCCTGATTGCCTCCCAATCTGGAGGCACCCCTTCTGTCCGTACCTTCAACATCTCCTCCTACTCTGTTGTCCTCCCTTCCCACTCCCTATCTTTCCCTGTTTGGGACGTCGCCGCCGAATGCTCCCAGGAGCAGTTCACCATCTTTGCTACTGTAAAGGTTCCAGAGAAGACTAAGTCGTTGAACCAAGTCTGGCAAGTTGGGCCTGGGGTGAATCCCCATTCTGGGATTCCAAAGGTTCATGCCTTTGATTCCTCTAATTTCAATGCCGAAAACGAGTTGGTGTTTGACAAGGAGGGTGGTGCTGATCTTGCCCCACACGCCCACCACGACGCCTCCCCTGCGCCCGAGGCTAGCACCACTGCCGCCTCCGCTTCGAGTGGGGTTGCCCAAATTACAACCAAAATGACCTCATACATATTATACGAGTTTGTATGA

Coding sequence (CDS)

ATGGCGTCCTTAGGCAATGCCCTTCTCAGTGTTTGCCTAATTGGATCGCTCATCTCGCAGGCCCAATCCCTCACTTGTTCTTCCCAAACCTTCCCAAAGAGATCCTTCGCCCACTGCGAGGATCTCCCCGAGCTCGGCGCCTTTCTCCACTGGACCCACGACCCCAAAAATTCATCTCTTTCCATCGCCTTCATTGCCACGCCGCCGCACGAGGAGGGATGGGTTGCCTGGGCTGTTAACCCCACCCACACCGGCATGATCGGAGCCCAAGCCCTGATTGCCTCCCAATCTGGAGGCACCCCTTCTGTCCGTACCTTCAACATCTCCTCCTACTCTGTTGTCCTCCCTTCCCACTCCCTATCTTTCCCTGTTTGGGACGTCGCCGCCGAATGCTCCCAGGAGCAGTTCACCATCTTTGCTACTGTAAAGGTTCCAGAGAAGACTAAGTCGTTGAACCAAGTCTGGCAAGTTGGGCCTGGGGTGAATCCCCATTCTGGGATTCCAAAGGTTCATGCCTTTGATTCCTCTAATTTCAATGCCGAAAACGAGTTGGTGTTTGACAAGGAGGGTGGTGCTGATCTTGCCCCACACGCCCACCACGACGCCTCCCCTGCGCCCGAGGCTAGCACCACTGCCGCCTCCGCTTCGAGTGGGGTTGCCCAAATTACAACCAAAATGACCTCATACATATTATACGAGTTTGTATGA

Homology

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BLAST of CmoCh04G006830 vs. Swiss-Prot
Match: AIR12_ARATH (Auxin-induced in root cultures protein 12 OS=Arabidopsis thaliana GN=AIR12 PE=1 SV=3)

HSP 1 Score: 150.2 bits (378), Expect = 2.8e-35
Identity = 99/226 (43.81%), Postives = 130/226 (57.52%), Query Frame = 1


Query: 1   MASLGNALL--SVCLIGSLISQAQSL-TCSSQTFPKRS-FAHCEDLPELGAFLHWTHDPK 60
           MAS  ++LL  +V    SLIS A S   C SQ       F  CEDLP L ++LH+T++  
Sbjct: 1   MASSSSSLLILAVACFVSLISPAISQQACKSQNLNSAGPFDSCEDLPVLNSYLHYTYNSS 60

Query: 61  NSSLSIAFIATPPHEE-GWVAWAVNPTHTGMIGAQALIASQSGG--TPSVRTFNISSYSV 120
           NSSLS+AF+ATP     GWVAWA+NPT T M G+QA +A +SGG   P V+T+NISSYS 
Sbjct: 61  NSSLSVAFVATPSQANGGWVAWAINPTGTKMAGSQAFLAYRSGGGAAPVVKTYNISSYSS 120

Query: 121 VLPSHSLSFPVWDVAAE-CSQEQFTIFATVKVPEKTKSLNQVWQVGPGVNPHSGIPKVHA 180
           ++    L+F  W++ AE  S  +  IF TVKVP    S+NQVWQ+G  V   +G P VH 
Sbjct: 121 LVEG-KLAFDFWNLRAESLSGGRIAIFTTVKVPAGADSVNQVWQIGGNVT--NGRPGVHP 180

Query: 181 FDSSNFNAENELVFDKEGGADLAPHAHHDASPAPEASTTAASASSG 219
           F   N  +   L F ++     AP      +P    STT  +A+ G
Sbjct: 181 FGPDNLGSHRVLSFTEDAAPGSAPSPGSAPAPGTSGSTTPGTAAGG 223

[Close]

BLAST of CmoCh04G006830 vs. Swiss-Prot
Match: B561C_ARATH (Cytochrome b561 and DOMON domain-containing protein At3g25290 OS=Arabidopsis thaliana GN=At3g25290 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 8.1e-35
Identity = 88/194 (45.36%), Postives = 119/194 (61.34%), Query Frame = 1


Query: 9   LSVCLIGSLISQAQSLTCSSQTFP-KRSFAHCEDLPELGAFLHWTHDPKNSSLSIAFIAT 68
           LS   +  LIS A S TC SQTF   +++ HC DLP+L AFLH+++D  N++L++ F A 
Sbjct: 11  LSFIFLALLISPAVSQTCKSQTFSGDKTYPHCLDLPQLKAFLHYSYDASNTTLAVVFSAP 70

Query: 69  PPHEEGWVAWAVNPTHTGMIGAQALIA--SQSGGTPSVRTFNISSYSVVLPSHSLSFPVW 128
           P    GW+AWA+NP  TGM+G+Q L+A      G   V+T NISSYS ++PS  L+F VW
Sbjct: 71  PAKPGGWIAWAINPKATGMVGSQTLVAYKDPGNGVAVVKTLNISSYSSLIPS-KLAFDVW 130

Query: 129 DVAAECSQE---QFTIFATVKVPEKTKS---LNQVWQVGPGVNPHSGIPKVHAFDSSNFN 188
           D+ AE +        IFA VKVP    +   +NQVWQVGP + P  G+   HAFDS+N  
Sbjct: 131 DMKAEEAARDGGSLRIFARVKVPADLVAKGKVNQVWQVGPELGP-GGMIGRHAFDSANLA 190

Query: 189 AEN--ELVFDKEGG 192
           + +  +L  D  GG
Sbjct: 191 SMSSLDLKGDNSGG 202

[Close]

BLAST of CmoCh04G006830 vs. Swiss-Prot
Match: B561O_ARATH (Cytochrome b561 and DOMON domain-containing protein At4g12980 OS=Arabidopsis thaliana GN=At4g12980 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.3e-34
Identity = 84/173 (48.55%), Postives = 110/173 (63.58%), Query Frame = 1


Query: 21  AQSLTCSSQTFPK-RSFAHCEDLPELGAFLHWTHDPKNSSLSIAFIATPPHEEGWVAWAV 80
           +QS +CSSQTF   +S+ HC DLP+L A LH+++D  N++L++ F A P    GW+AWA+
Sbjct: 24  SQSSSCSSQTFSGVKSYPHCLDLPDLKAILHYSYDASNTTLAVVFSAPPSKPGGWIAWAI 83

Query: 81  NPTHTGMIGAQALIASQ--SGGTPSVRTFNISSYSVVLPSHSLSFPVWDVAAECSQEQ-- 140
           NP  TGM G+QAL+AS+  S G  SV T NI SYS ++PS  LSF VWDV AE +     
Sbjct: 84  NPKSTGMAGSQALVASKDPSTGVASVTTLNIVSYSSLVPS-KLSFDVWDVKAEEAANDGG 143

Query: 141 -FTIFATVKVP---EKTKSLNQVWQVGPGVNPHSGIPKVHAFDSSNFNAENEL 185
              IFA VKVP     +  +NQVWQVGPGV+  +G  + H F   N N+   L
Sbjct: 144 ALRIFAKVKVPADLAASGKVNQVWQVGPGVS--NGRIQAHDFSGPNLNSVGSL 193

[Close]

BLAST of CmoCh04G006830 vs. Swiss-Prot
Match: B561P_ARATH (Cytochrome b561 and DOMON domain-containing protein At5g35735 OS=Arabidopsis thaliana GN=At5g35735 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.9e-24
Identity = 69/183 (37.70%), Postives = 101/183 (55.19%), Query Frame = 1


Query: 7   ALLSVCLIGSLISQAQSLTCSSQTFPKR-SFAHCEDLPELGAFLHWTHDPKNSSLSIAFI 66
           A+L+  L+  L    QSL C++  F    +FA C DL  LG+FLHWT++ +N ++SIA+ 
Sbjct: 13  AVLATLLV--LTVNGQSL-CNTHRFTNNLAFADCSDLSALGSFLHWTYNEQNGTVSIAYR 72

Query: 67  ATPPHEEGWVAWAVNPTHTGMIGAQALIASQSGGTPSVR--TFNISSYSVVLPSHSLSFP 126
                   WVAW +NP+ T M+G QAL+A  +  T   +  T ++SSY   L   SLSF 
Sbjct: 73  HPGTSASSWVAWGLNPSSTQMVGTQALVAFTNTTTNQFQAYTSSVSSYGTRLERSSLSFG 132

Query: 127 VWDVAAECSQEQFTIFATVKVPEKTKSLNQVWQVGPGVNPHSGIPKVHAFDSSNFNAENE 186
           V  ++A     + TIFAT+++     + NQ+WQVGP VN   G+P  H     N  +   
Sbjct: 133 VSGLSATLVSGEVTIFATLELSPNLITANQLWQVGPVVN---GVPASHQTSGDNMRSSGR 189

[Close]

BLAST of CmoCh04G006830 vs. Swiss-Prot
Match: B561J_ARATH (Cytochrome b561 and DOMON domain-containing protein At5g47530 OS=Arabidopsis thaliana GN=At5g47530 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 8.7e-21
Identity = 70/169 (41.42%), Postives = 92/169 (54.44%), Query Frame = 1


Query: 1   MASLGNALLSVCLIGSLISQ-AQSLTCSSQTFP-KRSFAHCEDLPELGAFLHWTHDPKNS 60
           MA   N LL + L   +I++ A +  CS+  F   R F  C DLP L +FLH+T+D  + 
Sbjct: 1   MAISSNLLLCLSLFIFIITKSALAQKCSNYKFSTNRLFESCNDLPVLDSFLHYTYDSSSG 60

Query: 61  SLSIAFIATPPHEEGWVAWAVNPTHTGMIGAQALIA-SQSGGTPSVRTFNISSYSVVLPS 120
           +L IA+  T      WVAWAVNPT TGM+GAQA++A  QS GT    T  ISSY   L  
Sbjct: 61  NLQIAYRHTKLTPGKWVAWAVNPTSTGMVGAQAIVAYPQSDGTVRAYTSPISSYQTSLLE 120

Query: 121 HSLSFPVWDVAAECSQEQFTIFATVKVPEKTKS-LNQVWQVG--PGVNP 164
             LSF V  ++A     +  I+A + +P      +N VWQ G   G NP
Sbjct: 121 AELSFNVSQLSATYQNNEMVIYAILNLPLANGGIINTVWQDGSLSGNNP 169

[Close]

BLAST of CmoCh04G006830 vs. TrEMBL
Match: A0A0A0K5A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G368155 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 7.1e-54
Identity = 114/219 (52.05%), Postives = 148/219 (67.58%), Query Frame = 1


Query: 1   MASLGNALLSVCLIGSLISQAQSLTCSSQTFPKRSFAHCEDLPELGAFLHWTHDPKNSSL 60
           MAS     L + LI S +S + SLTCSSQ+FP R+F +C+DLP L AFLHW+++PKNSSL
Sbjct: 1   MASFSTFFLFLTLISSSLSISHSLTCSSQSFPNRTFTNCQDLPYLHAFLHWSYNPKNSSL 60

Query: 61  SIAFIATPPHEEGWVAWAVNPTHTGMIGAQALIASQSGGTPSVRTFNISSYSVVLPSHSL 120
           SIAF+A PP   GWVAWAVNPT TGM G+QA +A+    + +VRTFNI+SY+ V PS +L
Sbjct: 61  SIAFLAPPPTTAGWVAWAVNPTATGMAGSQAFLAAFFTKSLTVRTFNITSYNSVRPSPTL 120

Query: 121 SFPVWDVAAECSQEQFTIFATVKVPEKTKSLNQVWQVGPGVNPHSGIPKVHAFDSSNFNA 180
           SFP WD+A++ S + F IF TVKVPEK+ SLNQVWQVG  V+   G+P VH F   N  +
Sbjct: 121 SFPFWDLASQSSDDLFAIFVTVKVPEKSSSLNQVWQVGASVDSSMGVPAVHEFKPDNLKS 180

Query: 181 ENELVFDKEGGADLAPHAHHDASPAPEASTTAASASSGV 220
              LVFD      ++P      +P P+    +A+ S+ V
Sbjct: 181 RGVLVFD----GSVSPVGTPSPAPRPDHGGASAAPSTSV 215

[Close]

BLAST of CmoCh04G006830 vs. TrEMBL
Match: M5VKB3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010457mg PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 6.7e-44
Identity = 102/210 (48.57%), Postives = 130/210 (61.90%), Query Frame = 1


Query: 11  VCLIGSLISQAQSLTCSSQTFPKRS-FAHCEDLPELGAFLHWTHDPKNSSLSIAFIATPP 70
           + L+  LIS AQ+ TC+SQTF K   +AHC DLP L ++LHWT++  NSSLS+AF+A P 
Sbjct: 16  ISLLALLISPAQAATCTSQTFKKNKLYAHCSDLPFLSSYLHWTYNASNSSLSVAFVAKPA 75

Query: 71  HEEGWVAWAVNPTHTGMIGAQALIASQS-GGTPSVRTFNISSYSVVLPSHSLSFPVWDVA 130
             +GWVAWA+NPT T M GAQ L+A ++  G P+V T NISSYS ++P   LSF VWDV+
Sbjct: 76  KSDGWVAWAINPTETKMAGAQTLLAYKTENGAPAVNTLNISSYSSIVPG-KLSFEVWDVS 135

Query: 131 AECSQEQFTIFATVKVPEKTKSLNQVWQVGPGVNPHSGIPKVHAFDSSNFNAENELVFDK 190
           AE S + FTIFATVKVP+   S+NQVWQVG  VN  SG P+ H     N  +   L    
Sbjct: 136 AEFSNDTFTIFATVKVPKDAASVNQVWQVGSAVNKTSGFPEKHDVAPPNLKSFGTLSL-- 195

Query: 191 EGGADLAPHAHHDASPAPEASTTAASASSG 219
             GA+     +         +TT  S   G
Sbjct: 196 --GANSTTTTNSTTGTPAGTNTTTNSTGGG 220

[Close]

BLAST of CmoCh04G006830 vs. TrEMBL
Match: M5W7R0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021935mg PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.5e-43
Identity = 93/176 (52.84%), Postives = 122/176 (69.32%), Query Frame = 1


Query: 11  VCLIGSLISQAQSLTCSSQTFPKRS-FAHCEDLPELGAFLHWTHDPKNSSLSIAFIATPP 70
           + L+  +IS AQ+ TCSSQTF     + +C DLP L ++LHWT++  NSSLSIAF+ATP 
Sbjct: 16  ISLLALVISPAQAATCSSQTFKNNKLYPNCSDLPFLSSYLHWTYNASNSSLSIAFVATPS 75

Query: 71  HEEGWVAWAVNPTHTGMIGAQALIASQS-GGTPSVRTFNISSYSVVLPSHSLSFPVWDVA 130
             EGWVAWA+NPT   M GAQ L+A ++  G P V+TFNI+SYS ++P   L+F VWDV+
Sbjct: 76  KSEGWVAWAINPTAAKMAGAQTLLAYKTEDGAPVVKTFNITSYSSIVPG-KLAFDVWDVS 135

Query: 131 AECSQEQFTIFATVKVPEKTKSLNQVWQVGPGVNPHSGIPKVHAFDSSNFNAENEL 185
           AE S+  FTIFA+VKVP+   S+NQVWQ+GP +N  SG P  H F   N  + + L
Sbjct: 136 AEFSKGTFTIFASVKVPKDAASVNQVWQLGPAINKTSGFPVKHDFAPPNLQSFSTL 190

[Close]

BLAST of CmoCh04G006830 vs. TrEMBL
Match: M5VVB4_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa023151mg PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.6e-42
Identity = 97/186 (52.15%), Postives = 124/186 (66.67%), Query Frame = 1


Query: 1   MASLGNALLSVCLIGS----LISQAQSLTCSSQTFPKRS-FAHCEDLPELGAFLHWTHDP 60
           MAS    L+SV    S    L+S AQ+ TC+SQTF     +++C DLP L ++LHWT+D 
Sbjct: 1   MASSLLLLVSVSWFSSFLALLVSPAQAATCTSQTFNNNKLYSNCTDLPVLNSYLHWTYDT 60

Query: 61  KNSSLSIAFIATPPHEEGWVAWAVNPTHTGMIGAQALIA-SQSGGTPSVRTFNISSYSVV 120
            +SSLSIAFI+TP   +GWVAW +NPT T M GAQ L+A +  GG P+V+TFNISSY+ V
Sbjct: 61  SDSSLSIAFISTPSQSDGWVAWGINPTSTKMAGAQILLAYNTDGGIPTVKTFNISSYTSV 120

Query: 121 LPSHSLSFPVWDVAAECSQEQFTIFATVKVPEKTKSLNQVWQVGPGVNPHSGIPKVHAFD 180
           +P   LSF +WD+++E S   F IFA VKVP+  KS+NQVWQVGP VN  SG P  H   
Sbjct: 121 VPG-KLSFDIWDISSEFSNGTFKIFAAVKVPKNKKSVNQVWQVGPRVNQTSGFPDKHDIV 180

[Close]

BLAST of CmoCh04G006830 vs. TrEMBL
Match: M5VT29_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa018032mg PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 8.2e-42
Identity = 96/186 (51.61%), Postives = 123/186 (66.13%), Query Frame = 1


Query: 1   MASLGNALLSVCLIGS----LISQAQSLTCSSQTFPKRS-FAHCEDLPELGAFLHWTHDP 60
           MAS    L+SV    S    L+S AQ+ TC+SQ F   + ++ C DLP L ++LHWT+D 
Sbjct: 1   MASSLLLLVSVSWFSSFLALLVSPAQADTCTSQVFINSNLYSSCTDLPVLSSYLHWTYDT 60

Query: 61  KNSSLSIAFIATPPHEEGWVAWAVNPTHTGMIGAQALIA-SQSGGTPSVRTFNISSYSVV 120
            NSSLSIAFI+TPP  +GWVAW +NPT T M GAQ L+A +   G P+V+TFNISSY+ V
Sbjct: 61  SNSSLSIAFISTPPQSDGWVAWGINPTSTKMAGAQILLAYNTDSGIPTVKTFNISSYTSV 120

Query: 121 LPSHSLSFPVWDVAAECSQEQFTIFATVKVPEKTKSLNQVWQVGPGVNPHSGIPKVHAFD 180
           +P   LSF +WD+++E S   F IFA +KVP+  KS+NQVWQVGP VN  SG P  H   
Sbjct: 121 VPG-KLSFDIWDISSEFSNGTFKIFAALKVPQNEKSVNQVWQVGPRVNQTSGFPDKHDIV 180

[Close]

BLAST of CmoCh04G006830 vs. TAIR10
Match: AT3G07390.1 (AT3G07390.1 auxin-responsive family protein)

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-36
Identity = 99/226 (43.81%), Postives = 130/226 (57.52%), Query Frame = 1


Query: 1   MASLGNALL--SVCLIGSLISQAQSL-TCSSQTFPKRS-FAHCEDLPELGAFLHWTHDPK 60
           MAS  ++LL  +V    SLIS A S   C SQ       F  CEDLP L ++LH+T++  
Sbjct: 22  MASSSSSLLILAVACFVSLISPAISQQACKSQNLNSAGPFDSCEDLPVLNSYLHYTYNSS 81

Query: 61  NSSLSIAFIATPPHEE-GWVAWAVNPTHTGMIGAQALIASQSGG--TPSVRTFNISSYSV 120
           NSSLS+AF+ATP     GWVAWA+NPT T M G+QA +A +SGG   P V+T+NISSYS 
Sbjct: 82  NSSLSVAFVATPSQANGGWVAWAINPTGTKMAGSQAFLAYRSGGGAAPVVKTYNISSYSS 141

Query: 121 VLPSHSLSFPVWDVAAE-CSQEQFTIFATVKVPEKTKSLNQVWQVGPGVNPHSGIPKVHA 180
           ++    L+F  W++ AE  S  +  IF TVKVP    S+NQVWQ+G  V   +G P VH 
Sbjct: 142 LVEG-KLAFDFWNLRAESLSGGRIAIFTTVKVPAGADSVNQVWQIGGNVT--NGRPGVHP 201

Query: 181 FDSSNFNAENELVFDKEGGADLAPHAHHDASPAPEASTTAASASSG 219
           F   N  +   L F ++     AP      +P    STT  +A+ G
Sbjct: 202 FGPDNLGSHRVLSFTEDAAPGSAPSPGSAPAPGTSGSTTPGTAAGG 244

[Close]

BLAST of CmoCh04G006830 vs. TAIR10
Match: AT3G25290.1 (AT3G25290.1 Auxin-responsive family protein)

HSP 1 Score: 148.7 bits (374), Expect = 4.6e-36
Identity = 88/194 (45.36%), Postives = 119/194 (61.34%), Query Frame = 1


Query: 9   LSVCLIGSLISQAQSLTCSSQTFP-KRSFAHCEDLPELGAFLHWTHDPKNSSLSIAFIAT 68
           LS   +  LIS A S TC SQTF   +++ HC DLP+L AFLH+++D  N++L++ F A 
Sbjct: 11  LSFIFLALLISPAVSQTCKSQTFSGDKTYPHCLDLPQLKAFLHYSYDASNTTLAVVFSAP 70

Query: 69  PPHEEGWVAWAVNPTHTGMIGAQALIA--SQSGGTPSVRTFNISSYSVVLPSHSLSFPVW 128
           P    GW+AWA+NP  TGM+G+Q L+A      G   V+T NISSYS ++PS  L+F VW
Sbjct: 71  PAKPGGWIAWAINPKATGMVGSQTLVAYKDPGNGVAVVKTLNISSYSSLIPS-KLAFDVW 130

Query: 129 DVAAECSQE---QFTIFATVKVPEKTKS---LNQVWQVGPGVNPHSGIPKVHAFDSSNFN 188
           D+ AE +        IFA VKVP    +   +NQVWQVGP + P  G+   HAFDS+N  
Sbjct: 131 DMKAEEAARDGGSLRIFARVKVPADLVAKGKVNQVWQVGPELGP-GGMIGRHAFDSANLA 190

Query: 189 AEN--ELVFDKEGG 192
           + +  +L  D  GG
Sbjct: 191 SMSSLDLKGDNSGG 202

[Close]

BLAST of CmoCh04G006830 vs. TAIR10
Match: AT4G12980.1 (AT4G12980.1 Auxin-responsive family protein)

HSP 1 Score: 146.0 bits (367), Expect = 3.0e-35
Identity = 84/173 (48.55%), Postives = 110/173 (63.58%), Query Frame = 1


Query: 21  AQSLTCSSQTFPK-RSFAHCEDLPELGAFLHWTHDPKNSSLSIAFIATPPHEEGWVAWAV 80
           +QS +CSSQTF   +S+ HC DLP+L A LH+++D  N++L++ F A P    GW+AWA+
Sbjct: 24  SQSSSCSSQTFSGVKSYPHCLDLPDLKAILHYSYDASNTTLAVVFSAPPSKPGGWIAWAI 83

Query: 81  NPTHTGMIGAQALIASQ--SGGTPSVRTFNISSYSVVLPSHSLSFPVWDVAAECSQEQ-- 140
           NP  TGM G+QAL+AS+  S G  SV T NI SYS ++PS  LSF VWDV AE +     
Sbjct: 84  NPKSTGMAGSQALVASKDPSTGVASVTTLNIVSYSSLVPS-KLSFDVWDVKAEEAANDGG 143

Query: 141 -FTIFATVKVP---EKTKSLNQVWQVGPGVNPHSGIPKVHAFDSSNFNAENEL 185
              IFA VKVP     +  +NQVWQVGPGV+  +G  + H F   N N+   L
Sbjct: 144 ALRIFAKVKVPADLAASGKVNQVWQVGPGVS--NGRIQAHDFSGPNLNSVGSL 193

[Close]

BLAST of CmoCh04G006830 vs. TAIR10
Match: AT5G35735.1 (AT5G35735.1 Auxin-responsive family protein)

HSP 1 Score: 113.6 bits (283), Expect = 1.6e-25
Identity = 69/183 (37.70%), Postives = 101/183 (55.19%), Query Frame = 1


Query: 7   ALLSVCLIGSLISQAQSLTCSSQTFPKR-SFAHCEDLPELGAFLHWTHDPKNSSLSIAFI 66
           A+L+  L+  L    QSL C++  F    +FA C DL  LG+FLHWT++ +N ++SIA+ 
Sbjct: 13  AVLATLLV--LTVNGQSL-CNTHRFTNNLAFADCSDLSALGSFLHWTYNEQNGTVSIAYR 72

Query: 67  ATPPHEEGWVAWAVNPTHTGMIGAQALIASQSGGTPSVR--TFNISSYSVVLPSHSLSFP 126
                   WVAW +NP+ T M+G QAL+A  +  T   +  T ++SSY   L   SLSF 
Sbjct: 73  HPGTSASSWVAWGLNPSSTQMVGTQALVAFTNTTTNQFQAYTSSVSSYGTRLERSSLSFG 132

Query: 127 VWDVAAECSQEQFTIFATVKVPEKTKSLNQVWQVGPGVNPHSGIPKVHAFDSSNFNAENE 186
           V  ++A     + TIFAT+++     + NQ+WQVGP VN   G+P  H     N  +   
Sbjct: 133 VSGLSATLVSGEVTIFATLELSPNLITANQLWQVGPVVN---GVPASHQTSGDNMRSSGR 189

[Close]

BLAST of CmoCh04G006830 vs. TAIR10
Match: AT5G47530.1 (AT5G47530.1 Auxin-responsive family protein)

HSP 1 Score: 102.1 bits (253), Expect = 4.9e-22
Identity = 70/169 (41.42%), Postives = 92/169 (54.44%), Query Frame = 1


Query: 1   MASLGNALLSVCLIGSLISQ-AQSLTCSSQTFP-KRSFAHCEDLPELGAFLHWTHDPKNS 60
           MA   N LL + L   +I++ A +  CS+  F   R F  C DLP L +FLH+T+D  + 
Sbjct: 1   MAISSNLLLCLSLFIFIITKSALAQKCSNYKFSTNRLFESCNDLPVLDSFLHYTYDSSSG 60

Query: 61  SLSIAFIATPPHEEGWVAWAVNPTHTGMIGAQALIA-SQSGGTPSVRTFNISSYSVVLPS 120
           +L IA+  T      WVAWAVNPT TGM+GAQA++A  QS GT    T  ISSY   L  
Sbjct: 61  NLQIAYRHTKLTPGKWVAWAVNPTSTGMVGAQAIVAYPQSDGTVRAYTSPISSYQTSLLE 120

Query: 121 HSLSFPVWDVAAECSQEQFTIFATVKVPEKTKS-LNQVWQVG--PGVNP 164
             LSF V  ++A     +  I+A + +P      +N VWQ G   G NP
Sbjct: 121 AELSFNVSQLSATYQNNEMVIYAILNLPLANGGIINTVWQDGSLSGNNP 169

[Close]

BLAST of CmoCh04G006830 vs. NCBI nr
Match: gi|700189430|gb|KGN44663.1| (hypothetical protein Csa_7G368155 [Cucumis sativus])

HSP 1 Score: 218.8 bits (556), Expect = 1.0e-53
Identity = 114/219 (52.05%), Postives = 148/219 (67.58%), Query Frame = 1


Query: 1   MASLGNALLSVCLIGSLISQAQSLTCSSQTFPKRSFAHCEDLPELGAFLHWTHDPKNSSL 60
           MAS     L + LI S +S + SLTCSSQ+FP R+F +C+DLP L AFLHW+++PKNSSL
Sbjct: 1   MASFSTFFLFLTLISSSLSISHSLTCSSQSFPNRTFTNCQDLPYLHAFLHWSYNPKNSSL 60

Query: 61  SIAFIATPPHEEGWVAWAVNPTHTGMIGAQALIASQSGGTPSVRTFNISSYSVVLPSHSL 120
           SIAF+A PP   GWVAWAVNPT TGM G+QA +A+    + +VRTFNI+SY+ V PS +L
Sbjct: 61  SIAFLAPPPTTAGWVAWAVNPTATGMAGSQAFLAAFFTKSLTVRTFNITSYNSVRPSPTL 120

Query: 121 SFPVWDVAAECSQEQFTIFATVKVPEKTKSLNQVWQVGPGVNPHSGIPKVHAFDSSNFNA 180
           SFP WD+A++ S + F IF TVKVPEK+ SLNQVWQVG  V+   G+P VH F   N  +
Sbjct: 121 SFPFWDLASQSSDDLFAIFVTVKVPEKSSSLNQVWQVGASVDSSMGVPAVHEFKPDNLKS 180

Query: 181 ENELVFDKEGGADLAPHAHHDASPAPEASTTAASASSGV 220
              LVFD      ++P      +P P+    +A+ S+ V
Sbjct: 181 RGVLVFD----GSVSPVGTPSPAPRPDHGGASAAPSTSV 215

[Close]

BLAST of CmoCh04G006830 vs. NCBI nr
Match: gi|595793179|ref|XP_007200338.1| (hypothetical protein PRUPE_ppa010457mg [Prunus persica])

HSP 1 Score: 185.7 bits (470), Expect = 9.6e-44
Identity = 102/210 (48.57%), Postives = 130/210 (61.90%), Query Frame = 1


Query: 11  VCLIGSLISQAQSLTCSSQTFPKRS-FAHCEDLPELGAFLHWTHDPKNSSLSIAFIATPP 70
           + L+  LIS AQ+ TC+SQTF K   +AHC DLP L ++LHWT++  NSSLS+AF+A P 
Sbjct: 16  ISLLALLISPAQAATCTSQTFKKNKLYAHCSDLPFLSSYLHWTYNASNSSLSVAFVAKPA 75

Query: 71  HEEGWVAWAVNPTHTGMIGAQALIASQS-GGTPSVRTFNISSYSVVLPSHSLSFPVWDVA 130
             +GWVAWA+NPT T M GAQ L+A ++  G P+V T NISSYS ++P   LSF VWDV+
Sbjct: 76  KSDGWVAWAINPTETKMAGAQTLLAYKTENGAPAVNTLNISSYSSIVPG-KLSFEVWDVS 135

Query: 131 AECSQEQFTIFATVKVPEKTKSLNQVWQVGPGVNPHSGIPKVHAFDSSNFNAENELVFDK 190
           AE S + FTIFATVKVP+   S+NQVWQVG  VN  SG P+ H     N  +   L    
Sbjct: 136 AEFSNDTFTIFATVKVPKDAASVNQVWQVGSAVNKTSGFPEKHDVAPPNLKSFGTLSL-- 195

Query: 191 EGGADLAPHAHHDASPAPEASTTAASASSG 219
             GA+     +         +TT  S   G
Sbjct: 196 --GANSTTTTNSTTGTPAGTNTTTNSTGGG 220

[Close]

BLAST of CmoCh04G006830 vs. NCBI nr
Match: gi|645279395|ref|XP_008244699.1| (PREDICTED: auxin-induced in root cultures protein 12-like [Prunus mume])

HSP 1 Score: 184.9 bits (468), Expect = 1.6e-43
Identity = 93/172 (54.07%), Postives = 116/172 (67.44%), Query Frame = 1


Query: 11  VCLIGSLISQAQSLTCSSQTFPKRS-FAHCEDLPELGAFLHWTHDPKNSSLSIAFIATPP 70
           + L+  LIS AQ+ TC+SQTF     +A C DLP L ++LHWT+   NSSLS+AF+ATP 
Sbjct: 16  ISLLALLISPAQAATCTSQTFKNNKLYAQCNDLPYLSSYLHWTYSASNSSLSVAFVATPA 75

Query: 71  HEEGWVAWAVNPTHTGMIGAQALIA-SQSGGTPSVRTFNISSYSVVLPSHSLSFPVWDVA 130
             +GWVAWA+NPT T M GAQ L+A     G P+V T NISSY+ ++P   LSF VWDV+
Sbjct: 76  KSDGWVAWAINPTQTKMAGAQTLLAYKNEKGAPAVNTLNISSYNSIVPG-KLSFEVWDVS 135

Query: 131 AECSQEQFTIFATVKVPEKTKSLNQVWQVGPGVNPHSGIPKVHAFDSSNFNA 181
           AE S   FTIFATVKVP+   S+NQVWQVG  VN  SG P+ H    +N  +
Sbjct: 136 AEFSNGSFTIFATVKVPKDAASVNQVWQVGSAVNKTSGFPEKHDVAPANLKS 186

[Close]

BLAST of CmoCh04G006830 vs. NCBI nr
Match: gi|658057145|ref|XP_008364338.1| (PREDICTED: auxin-induced in root cultures protein 12-like [Malus domestica])

HSP 1 Score: 184.5 bits (467), Expect = 2.1e-43
Identity = 93/174 (53.45%), Postives = 121/174 (69.54%), Query Frame = 1


Query: 13  LIGSLISQA-QSLTCSSQTFPKRSFAHCEDLPELGAFLHWTHDPKNSSLSIAFIATPPHE 72
           L+  LIS A Q+ TC+SQTF  + +++C DLP L ++LHWT+D  NSSLSIAF+A P   
Sbjct: 18  LLALLISPAVQAATCNSQTFKNKLYSNCSDLPVLSSYLHWTYDRSNSSLSIAFVAAPAKT 77

Query: 73  EGWVAWAVNPTHTGMIGAQALIAS-QSGGTPSVRTFNISSYSVVLPSHSLSFPVWDVAAE 132
           +GWVAWA+NPT   M G+QAL+A   + GTP+V T+NISSY+ ++P   LSF VWDV+AE
Sbjct: 78  DGWVAWAINPTAERMAGSQALLAHLTANGTPTVTTYNISSYASIIPG-KLSFDVWDVSAE 137

Query: 133 CSQEQFTIFATVKVPEKTKSLNQVWQVGPGVNPHSGIPKVHAFDSSNFNAENEL 185
            S   F IFATVKV +   S+N VWQVGPGVN  +G P+ H F  +N  +   L
Sbjct: 138 FSSGTFMIFATVKVKKDAVSVNHVWQVGPGVNTTTGFPEKHDFSPANLRSYETL 190

[Close]

BLAST of CmoCh04G006830 vs. NCBI nr
Match: gi|595800230|ref|XP_007201646.1| (hypothetical protein PRUPE_ppa021935mg [Prunus persica])

HSP 1 Score: 184.5 bits (467), Expect = 2.1e-43
Identity = 93/176 (52.84%), Postives = 122/176 (69.32%), Query Frame = 1


Query: 11  VCLIGSLISQAQSLTCSSQTFPKRS-FAHCEDLPELGAFLHWTHDPKNSSLSIAFIATPP 70
           + L+  +IS AQ+ TCSSQTF     + +C DLP L ++LHWT++  NSSLSIAF+ATP 
Sbjct: 16  ISLLALVISPAQAATCSSQTFKNNKLYPNCSDLPFLSSYLHWTYNASNSSLSIAFVATPS 75

Query: 71  HEEGWVAWAVNPTHTGMIGAQALIASQS-GGTPSVRTFNISSYSVVLPSHSLSFPVWDVA 130
             EGWVAWA+NPT   M GAQ L+A ++  G P V+TFNI+SYS ++P   L+F VWDV+
Sbjct: 76  KSEGWVAWAINPTAAKMAGAQTLLAYKTEDGAPVVKTFNITSYSSIVPG-KLAFDVWDVS 135

Query: 131 AECSQEQFTIFATVKVPEKTKSLNQVWQVGPGVNPHSGIPKVHAFDSSNFNAENEL 185
           AE S+  FTIFA+VKVP+   S+NQVWQ+GP +N  SG P  H F   N  + + L
Sbjct: 136 AEFSKGTFTIFASVKVPKDAASVNQVWQLGPAINKTSGFPVKHDFAPPNLQSFSTL 190

The following BLAST results are available for this feature:

BLAST of CmoCh04G006830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AIR12_ARATH	2.8e-35	43.81	Auxin-induced in root cultures protein 12 OS=Arabidopsis thaliana GN=AIR12 PE=1 ...	[more]
B561C_ARATH	8.1e-35	45.36	Cytochrome b561 and DOMON domain-containing protein At3g25290 OS=Arabidopsis tha...	[more]
B561O_ARATH	5.3e-34	48.55	Cytochrome b561 and DOMON domain-containing protein At4g12980 OS=Arabidopsis tha...	[more]
B561P_ARATH	2.9e-24	37.70	Cytochrome b561 and DOMON domain-containing protein At5g35735 OS=Arabidopsis tha...	[more]
B561J_ARATH	8.7e-21	41.42	Cytochrome b561 and DOMON domain-containing protein At5g47530 OS=Arabidopsis tha...	[more]

BLAST of CmoCh04G006830 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5A4_CUCSA	7.1e-54	52.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G368155 PE=4 SV=1	[more]
M5VKB3_PRUPE	6.7e-44	48.57	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010457mg PE=4 SV=1	[more]
M5W7R0_PRUPE	1.5e-43	52.84	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021935mg PE=4 SV=1	[more]
M5VVB4_PRUPE	1.6e-42	52.15	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa023151mg PE=4 S...	[more]
M5VT29_PRUPE	8.2e-42	51.61	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa018032mg PE=4 S...	[more]

BLAST of CmoCh04G006830 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07390.1	1.6e-36	43.81	auxin-responsive family protein	[more]
AT3G25290.1	4.6e-36	45.36	Auxin-responsive family protein	[more]
AT4G12980.1	3.0e-35	48.55	Auxin-responsive family protein	[more]
AT5G35735.1	1.6e-25	37.70	Auxin-responsive family protein	[more]
AT5G47530.1	4.9e-22	41.42	Auxin-responsive family protein	[more]

BLAST of CmoCh04G006830 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700189430\|gb\|KGN44663.1\|	1.0e-53	52.05	hypothetical protein Csa_7G368155 [Cucumis sativus]	[more]
gi\|595793179\|ref\|XP_007200338.1\|	9.6e-44	48.57	hypothetical protein PRUPE_ppa010457mg [Prunus persica]	[more]
gi\|645279395\|ref\|XP_008244699.1\|	1.6e-43	54.07	PREDICTED: auxin-induced in root cultures protein 12-like [Prunus mume]	[more]
gi\|658057145\|ref\|XP_008364338.1\|	2.1e-43	53.45	PREDICTED: auxin-induced in root cultures protein 12-like [Malus domestica]	[more]
gi\|595800230\|ref\|XP_007201646.1\|	2.1e-43	52.84	hypothetical protein PRUPE_ppa021935mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005018	DOMON_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G006830.1	CmoCh04G006830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005018	DOMON domain	PFAM	PF04526	DUF568	coord: 86..185 score: 2.3
IPR005018	DOMON domain	PROFILE	PS50836	DOMON	coord: 45..158 score: 12
None	No IPR available	PANTHER	PTHR23130	FAMILY NOT NAMED	coord: 19..186 score: 5.0
None	No IPR available	PANTHER	PTHR23130:SF95	AUXIN-RESPONSIVE PROTEIN-RELATED	coord: 19..186 score: 5.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G006830	CmaCh04G006340	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G006830	Carg13112	Silver-seed gourd	carcmoB0058

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G006830	Cucumber (Gy14) v1	cgycmoB0512
CmoCh04G006830	Cucurbita maxima (Rimu)	cmacmoB340
CmoCh04G006830	Wild cucumber (PI 183967)	cmocpiB707
CmoCh04G006830	Cucumber (Chinese Long) v2	cmocuB699
CmoCh04G006830	Melon (DHL92) v3.5.1	cmomeB693
CmoCh04G006830	Watermelon (Charleston Gray)	cmowcgB677
CmoCh04G006830	Watermelon (97103) v1	cmowmB686
CmoCh04G006830	Cucurbita pepo (Zucchini)	cmocpeB670
CmoCh04G006830	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G006830	Bottle gourd (USVL1VR-Ls)	cmolsiB689
CmoCh04G006830	Bottle gourd (USVL1VR-Ls)	cmolsiB696
CmoCh04G006830	Cucumber (Gy14) v2	cgybcmoB515
CmoCh04G006830	Melon (DHL92) v3.6.1	cmomedB787
CmoCh04G006830	Silver-seed gourd	carcmoB0902
CmoCh04G006830	Cucumber (Chinese Long) v3	cmocucB0827
CmoCh04G006830	Watermelon (97103) v2	cmowmbB756
CmoCh04G006830	Wax gourd	cmowgoB0844
CmoCh04G006830	Cucurbita moschata (Rifu)	cmocmoB288