CmoCh04G006540 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G006540
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	FRS (FAR1 Related Sequences) transcription factor family
Location	Cmo_Chr04 : 3244730 .. 3245500 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGACGTTGTGGCTGAAATGCATGATAGAGATGATGGAATTGTTAGTTTACCGAAGGACATCCTGTTTGAAGGGGACATAGATTTTGAGCCACGGAGTGGAATTGAATTTGAATCCCACGAAGCTGCATACACATTTTATCAAGAGTATGCCAAATCAATGGGATTCACCACATCGATTAAGAATAGTCGACGTTCAAAGAAATCAAAAGAGTTTATTGATGCAAAATTTGCATGTTCAAGATATGGAGTTACTCCTGAATCTGAGAATGGAAATAGTCGAAGGCCAAGCGTGAAAAAAACCGACTGTAAAGCCAGTATGCATGTGAAGAGAAGGCCAGATGGAAGATGGATTATTCATGAATTCATAAAAGATCATAATCATGAGTTTTTACCTGCTCTTGCATATCATTTCCGCATCCATAGGAATGTAAAGCTTGCAGAGAAGAACAACATCGTCATATTACATGCTGTTAGTGAAAGAACACGGAGGATGTATGTTGAGATGTCGAAAAAACGTGGTGTGTACAGAAATGTTGGTTTCCCGCAGATTGACACAACTTATCAGTTCAACAAAGGCCAGTATTTAGCGCTTGATGAGGGTGATGCGCAAGTATTGCTGGAGTATTTTAAGCGTATCCAAAAGGAGAATCCTTACTTTTTCTATGCTATAGACTTGAATGAAGAGCAACGTCTGAGAAACTTGTTTTGGGTCGATGCCAAAAGTAGGAACGATTATGTTAGTTTCAGTGACGTTGTTTCATTCTAG

mRNA sequence

ATGGTCGACGTTGTGGCTGAAATGCATGATAGAGATGATGGAATTGTTAGTTTACCGAAGGACATCCTGTTTGAAGGGGACATAGATTTTGAGCCACGGAGTGGAATTGAATTTGAATCCCACGAAGCTGCATACACATTTTATCAAGAGTATGCCAAATCAATGGGATTCACCACATCGATTAAGAATAGTCGACGTTCAAAGAAATCAAAAGAGTTTATTGATGCAAAATTTGCATGTTCAAGATATGGAGTTACTCCTGAATCTGAGAATGGAAATAGTCGAAGGCCAAGCGTGAAAAAAACCGACTGTAAAGCCAGTATGCATGTGAAGAGAAGGCCAGATGGAAGATGGATTATTCATGAATTCATAAAAGATCATAATCATGAGTTTTTACCTGCTCTTGCATATCATTTCCGCATCCATAGGAATGTAAAGCTTGCAGAGAAGAACAACATCGTCATATTACATGCTGTTAGTGAAAGAACACGGAGGATGTATGTTGAGATGTCGAAAAAACGTGGTGTGTACAGAAATGTTGGTTTCCCGCAGATTGACACAACTTATCAGTTCAACAAAGGCCAGTATTTAGCGCTTGATGAGGGTGATGCGCAAGTATTGCTGGAGTATTTTAAGCGTATCCAAAAGGAGAATCCTTACTTTTTCTATGCTATAGACTTGAATGAAGAGCAACGTCTGAGAAACTTGTTTTGGGTCGATGCCAAAAGTAGGAACGATTATGTTAGTTTCAGTGACGTTGTTTCATTCTAG

Coding sequence (CDS)

ATGGTCGACGTTGTGGCTGAAATGCATGATAGAGATGATGGAATTGTTAGTTTACCGAAGGACATCCTGTTTGAAGGGGACATAGATTTTGAGCCACGGAGTGGAATTGAATTTGAATCCCACGAAGCTGCATACACATTTTATCAAGAGTATGCCAAATCAATGGGATTCACCACATCGATTAAGAATAGTCGACGTTCAAAGAAATCAAAAGAGTTTATTGATGCAAAATTTGCATGTTCAAGATATGGAGTTACTCCTGAATCTGAGAATGGAAATAGTCGAAGGCCAAGCGTGAAAAAAACCGACTGTAAAGCCAGTATGCATGTGAAGAGAAGGCCAGATGGAAGATGGATTATTCATGAATTCATAAAAGATCATAATCATGAGTTTTTACCTGCTCTTGCATATCATTTCCGCATCCATAGGAATGTAAAGCTTGCAGAGAAGAACAACATCGTCATATTACATGCTGTTAGTGAAAGAACACGGAGGATGTATGTTGAGATGTCGAAAAAACGTGGTGTGTACAGAAATGTTGGTTTCCCGCAGATTGACACAACTTATCAGTTCAACAAAGGCCAGTATTTAGCGCTTGATGAGGGTGATGCGCAAGTATTGCTGGAGTATTTTAAGCGTATCCAAAAGGAGAATCCTTACTTTTTCTATGCTATAGACTTGAATGAAGAGCAACGTCTGAGAAACTTGTTTTGGGTCGATGCCAAAAGTAGGAACGATTATGTTAGTTTCAGTGACGTTGTTTCATTCTAG

Homology

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BLAST of CmoCh04G006540 vs. Swiss-Prot
Match: FAR1_ARATH (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 1.4e-109
Identity = 199/263 (75.67%), Postives = 232/263 (88.21%), Query Frame = 1


Query: 1   MVDVVAEMH-DRDDGIV---SLPKDILFEGDIDFEPRSGIEFESHEAAYTFYQEYAKSMG 60
           MVD+V E H +RD GIV   ++  D+ F GD+D EPR+GI+F++HEAAY FYQEYAKSMG
Sbjct: 16  MVDIVVEPHSNRDIGIVDEFNIGGDVGFSGDLDLEPRNGIDFDTHEAAYIFYQEYAKSMG 75

Query: 61  FTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESENG--NSRRPSVKKTDCKASMHVKRRP 120
           FTTSIKNSRRSKK+K+FIDAKFACSRYGVTPESE+   +SRR +VKKTDCKASMHVKRRP
Sbjct: 76  FTTSIKNSRRSKKTKDFIDAKFACSRYGVTPESESSGSSSRRSTVKKTDCKASMHVKRRP 135

Query: 121 DGRWIIHEFIKDHNHEFLPALAYHFRIHRNVKLAEKNNIVILHAVSERTRRMYVEMSKKR 180
           DG+WIIHEF+KDHNHE LPALAYHFRI RNVKLAEKNNI ILHAVSERT++MYVEMS++ 
Sbjct: 136 DGKWIIHEFVKDHNHELLPALAYHFRIQRNVKLAEKNNIDILHAVSERTKKMYVEMSRQS 195

Query: 181 GVYRNVG-FPQIDTTYQFNKGQYLALDEGDAQVLLEYFKRIQKENPYFFYAIDLNEEQRL 240
           G Y+N+G   Q D + Q +KG+YLAL+EGD+QVLLEYFKRI+KENP FFYAIDLNE+QRL
Sbjct: 196 GGYKNIGSLLQTDVSSQVDKGRYLALEEGDSQVLLEYFKRIKKENPKFFYAIDLNEDQRL 255

Query: 241 RNLFWVDAKSRNDYVSFSDVVSF 257
           RNLFW DAKSR+DY+SF+DVVSF
Sbjct: 256 RNLFWADAKSRDDYLSFNDVVSF 278

[Close]

BLAST of CmoCh04G006540 vs. Swiss-Prot
Match: FHY3_ARATH (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana GN=FHY3 PE=1 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 8.0e-60
Identity = 123/270 (45.56%), Postives = 172/270 (63.70%), Query Frame = 1


Query: 3   DVVAEMHDRDDGIVSLPKDILFE--GDIDFEPRSGIEFESHEAAYTFYQEYAKSMGFTTS 62
           DV  E++  D   + +P   L E    ++ EP +G+EFESH  AY+FYQEY+++MGF T+
Sbjct: 39  DVSVEVNTDDSVGMGVPTGELVEYTEGMNLEPLNGMEFESHGEAYSFYQEYSRAMGFNTA 98

Query: 63  IKNSRRSKKSKEFIDAKFACSRYGVTPESENGNSR---------------RPSVKKTDCK 122
           I+NSRRSK ++EFIDAKFACSRYG   E +   +R               R +  KTDCK
Sbjct: 99  IQNSRRSKTTREFIDAKFACSRYGTKREYDKSFNRPRARQSKQDPENMAGRRTCAKTDCK 158

Query: 123 ASMHVKRRPDGRWIIHEFIKDHNHEFLPALAYHFRIHRNVKLAEKNNIVILHAVSERTRR 182
           ASMHVKRRPDG+W+IH F+++HNHE LPA                       AVSE+TR+
Sbjct: 159 ASMHVKRRPDGKWVIHSFVREHNHELLPA----------------------QAVSEQTRK 218

Query: 183 MYVEMSKKRGVYRNVGFPQIDTTYQFNKGQYLALDEGDAQVLLEYFKRIQKENPYFFYAI 242
           +Y  M+K+   Y+ V   + D+   F KG+ L+++ GD ++LL++  R+Q  N  FFYA+
Sbjct: 219 IYAAMAKQFAEYKTVISLKSDSKSSFEKGRTLSVETGDFKILLDFLSRMQSLNSNFFYAV 278

Query: 243 DLNEEQRLRNLFWVDAKSRNDYVSFSDVVS 256
           DL ++QR++N+FWVDAKSR++Y SF DVVS
Sbjct: 279 DLGDDQRVKNVFWVDAKSRHNYGSFCDVVS 286

[Close]

BLAST of CmoCh04G006540 vs. Swiss-Prot
Match: FRS4_ARATH (Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana GN=FRS4 PE=2 SV=2)

HSP 1 Score: 219.5 bits (558), Expect = 4.1e-56
Identity = 111/221 (50.23%), Postives = 152/221 (68.78%), Query Frame = 1


Query: 36  IEFESHEAAYTFYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESENGNSR 95
           +EFE+HE AY FY++YAKS+GF T+  +SRRS+ SKEFIDAKF+C RYG   +S++  + 
Sbjct: 1   MEFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGSKQQSDDAINP 60

Query: 96  RPSVKKTDCKASMHVKRRPDGRWIIHEFIKDHNHEFLPALAYHFRIHRNVKLAEKNNIVI 155
           R S  K  CKASMHVKRRPDG+W ++ F+K+HNH+ LP  A++FR HRN +L + N+  +
Sbjct: 61  RAS-PKIGCKASMHVKRRPDGKWYVYSFVKEHNHDLLPEQAHYFRSHRNTELVKSNDSRL 120

Query: 156 LHAVSERTRRMYVEMSKKRGVYRNVGFPQIDTTYQFNKGQYLALDEGDAQVLLEYFKRIQ 215
                 R +   +   K    Y ++ F       Q +KG+ L LD GDA++LLE+  R+Q
Sbjct: 121 -----RRKKNTPLTDCKHLSAYHDLDFIDGYMRNQHDKGRRLVLDTGDAEILLEFLMRMQ 180

Query: 216 KENPYFFYAIDLNEEQRLRNLFWVDAKSRNDYVSFSDVVSF 257
           +ENP FF+A+D +E+  LRN+FWVDAK   DY SFSDVVSF
Sbjct: 181 EENPKFFFAVDFSEDHLLRNVFWVDAKGIEDYKSFSDVVSF 215

[Close]

BLAST of CmoCh04G006540 vs. Swiss-Prot
Match: FRS2_ARATH (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=FRS2 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 4.4e-42
Identity = 97/226 (42.92%), Postives = 134/226 (59.29%), Query Frame = 1


Query: 31  EPRSGIEFESHEAAYTFYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESE 90
           E R+G++FES EAAY FY+EYA+S+GF  +IK SRRSK+S +FID K ACSR+G   E  
Sbjct: 37  ELRNGMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFGTKREKA 96

Query: 91  NGNSRRPSVKKTDCKASMHVKRRPDGRWIIHEFIKDHNHEFLPALAYHFRIHRNVKLAEK 150
              + R S  KT CKA +H+KR+ D +W+I+ F+K+HNHE  P                 
Sbjct: 97  TAINPR-SCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHEICPD---------------- 156

Query: 151 NNIVILHAVSERTRRMYVEMSKKRGVYRNVGFPQIDTTYQFNKGQYLALDEGDAQVLLEY 210
                           YV +   RG  +  G   I       KG  LAL+E D ++LLE+
Sbjct: 157 --------------DFYVSV---RGKNKPAGALAI------KKGLQLALEEEDLKLLLEH 216

Query: 211 FKRIQKENPYFFYAIDLNEEQRLRNLFWVDAKSRNDYVSFSDVVSF 257
           F  +Q + P FFYA+D + ++R+RN+FW+DAK+++DY SFSDVV F
Sbjct: 217 FMEMQDKQPGFFYAVDFDSDKRVRNVFWLDAKAKHDYCSFSDVVLF 222

[Close]

BLAST of CmoCh04G006540 vs. Swiss-Prot
Match: FRS5_ARATH (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-38
Identity = 84/235 (35.74%), Postives = 133/235 (56.60%), Query Frame = 1


Query: 28  IDFEPRSGIEFESHEAAYTFYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTP 87
           +D EP  G+EFES EAA  FY  YA+ +GF+T + +SRRS++    I  +F C++ G   
Sbjct: 69  LDLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRN 128

Query: 88  ESENGNS----RRP-SVKKTDCKASMHVKRRPDGRWIIHEFIKDHNHEFLPALAYH-FRI 147
            +E        +RP ++ +  CKAS+ VK +  G+W++  F+KDHNHE +P    H  R 
Sbjct: 129 MNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPDQVHCLRS 188

Query: 148 HRNVKLAEKNNIVILHAVSERTRRMYVEMSKKRGVYRNVGFPQIDTTYQFNKGQYLALDE 207
           HR +    K  I  L A     RR+   + K+ G    VGF ++D        +  ++ E
Sbjct: 189 HRQISGPAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQKSI-E 248

Query: 208 GDAQVLLEYFKRIQKENPYFFYAIDLNEEQRLRNLFWVDAKSRNDYVSFSDVVSF 257
           G+ Q+LL+Y +++  +NP FFY++  +E+Q + N+FW D K+  D+  F D V+F
Sbjct: 249 GEIQLLLDYLRQMNADNPNFFYSVQGSEDQSVGNVFWADPKAIMDFTHFGDTVTF 302

[Close]

BLAST of CmoCh04G006540 vs. TrEMBL
Match: A0A0A0KXC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056770 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 2.7e-131
Identity = 238/257 (92.61%), Postives = 246/257 (95.72%), Query Frame = 1


Query: 1   MVDVVAEMHDRDDGIVSLPK-DILFEGDIDFEPRSGIEFESHEAAYTFYQEYAKSMGFTT 60
           MVDVVAEM DR  GIVSLPK DILFEGD+DFEP +GIEFESHEAAYTFYQEYAKSMGFTT
Sbjct: 1   MVDVVAEMQDRG-GIVSLPKKDILFEGDVDFEPHTGIEFESHEAAYTFYQEYAKSMGFTT 60

Query: 61  SIKNSRRSKKSKEFIDAKFACSRYGVTPESENGNSRRPSVKKTDCKASMHVKRRPDGRWI 120
           SIKNSRRSKKSKEFIDAKFACSRYGVTPESE+GNSRRPSVKKTDCKASMHVKRRPDGRWI
Sbjct: 61  SIKNSRRSKKSKEFIDAKFACSRYGVTPESESGNSRRPSVKKTDCKASMHVKRRPDGRWI 120

Query: 121 IHEFIKDHNHEFLPALAYHFRIHRNVKLAEKNNIVILHAVSERTRRMYVEMSKKRGVYRN 180
           IHEFIKDHNHE LPALAYHFRIHRNVKLAEKNNI ILHAVSERTRRMYVEMSK+ G YRN
Sbjct: 121 IHEFIKDHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRRMYVEMSKQCGGYRN 180

Query: 181 VGFPQIDTTYQFNKGQYLALDEGDAQVLLEYFKRIQKENPYFFYAIDLNEEQRLRNLFWV 240
             FPQIDTTYQF+KG+YLALDEGDAQ+LLEYFKR+QKENPYFFYAIDLNEEQRLRNLFWV
Sbjct: 181 FSFPQIDTTYQFDKGRYLALDEGDAQMLLEYFKRVQKENPYFFYAIDLNEEQRLRNLFWV 240

Query: 241 DAKSRNDYVSFSDVVSF 257
           DAKSRNDYVSFSDVVSF
Sbjct: 241 DAKSRNDYVSFSDVVSF 256

[Close]

BLAST of CmoCh04G006540 vs. TrEMBL
Match: F6HTN0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0017g01810 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 1.3e-112
Identity = 209/259 (80.69%), Postives = 233/259 (89.96%), Query Frame = 1


Query: 1   MVDVVAEMHDRDDGIVSLPK-DIL-FEGDIDFEPRSGIEFESHEAAYTFYQEYAKSMGFT 60
           MVD V   HDRD  I++ PK D++  EGD DFEPR+GIEFESHEAAY+FYQEYAKSMGFT
Sbjct: 1   MVDAVDGGHDRDGKILNSPKMDVIRAEGDTDFEPRNGIEFESHEAAYSFYQEYAKSMGFT 60

Query: 61  TSIKNSRRSKKSKEFIDAKFACSRYGVTPESENGN-SRRPSVKKTDCKASMHVKRRPDGR 120
           TSIKNSRRSKKSKEFIDAKFACSRYGVTPES++G+ SRRPSVKKTDCKASMHVKRR DG+
Sbjct: 61  TSIKNSRRSKKSKEFIDAKFACSRYGVTPESDSGSSSRRPSVKKTDCKASMHVKRRLDGK 120

Query: 121 WIIHEFIKDHNHEFLPALAYHFRIHRNVKLAEKNNIVILHAVSERTRRMYVEMSKKRGVY 180
           W+IHEFIK+HNHE LPALAYHFRIHRNVKLAEKNNI IL AVSERTR+MYVEMS++ G Y
Sbjct: 121 WVIHEFIKEHNHELLPALAYHFRIHRNVKLAEKNNIDILQAVSERTRKMYVEMSRQCGGY 180

Query: 181 RNVGFPQIDTTYQFNKGQYLALDEGDAQVLLEYFKRIQKENPYFFYAIDLNEEQRLRNLF 240
           R+VGF + +   QF+KG+YLALDEGDAQV+LEYFK IQK+NP FFYA+DLNEEQRLRNLF
Sbjct: 181 RDVGFLRNEIPSQFDKGRYLALDEGDAQVILEYFKHIQKDNPNFFYALDLNEEQRLRNLF 240

Query: 241 WVDAKSRNDYVSFSDVVSF 257
           WVDAKSRNDY+ FSDVVSF
Sbjct: 241 WVDAKSRNDYIHFSDVVSF 259

[Close]

BLAST of CmoCh04G006540 vs. TrEMBL
Match: M5XA11_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001511mg PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 2.1e-112
Identity = 207/258 (80.23%), Postives = 231/258 (89.53%), Query Frame = 1


Query: 1   MVDVVAEMHDRDDGIVSLPK-DI-LFEGDIDFEPRSGIEFESHEAAYTFYQEYAKSMGFT 60
           MV VV E+ +R   ++S PK DI +FEGD DFEP +GIEFESHEAAY+FYQEYAKSMGFT
Sbjct: 1   MVAVVEEVQNRGGVVISSPKRDIQVFEGDTDFEPCNGIEFESHEAAYSFYQEYAKSMGFT 60

Query: 61  TSIKNSRRSKKSKEFIDAKFACSRYGVTPESENGNSRRPSVKKTDCKASMHVKRRPDGRW 120
           TSIKNSRRSKKSKEFIDAKFACSRYGVTPES++G SRRP+VKKTDCKASMHVKRR DG+W
Sbjct: 61  TSIKNSRRSKKSKEFIDAKFACSRYGVTPESDSGTSRRPTVKKTDCKASMHVKRRADGKW 120

Query: 121 IIHEFIKDHNHEFLPALAYHFRIHRNVKLAEKNNIVILHAVSERTRRMYVEMSKKRGVYR 180
           IIHEFIK+HNHE LPALAYHFRIHRNVKLAEKNNI ILHAVSERTR+MYVEMS++ G Y+
Sbjct: 121 IIHEFIKEHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRKMYVEMSRQSGGYQ 180

Query: 181 NVGFPQIDTTYQFNKGQYLALDEGDAQVLLEYFKRIQKENPYFFYAIDLNEEQRLRNLFW 240
           N GF   D+ YQF+K + L LDEGDAQV+LEYFKRI+KENP FFYAIDLNEEQR+RNLFW
Sbjct: 181 NTGFTTTDSNYQFDKCRDLGLDEGDAQVMLEYFKRIRKENPNFFYAIDLNEEQRVRNLFW 240

Query: 241 VDAKSRNDYVSFSDVVSF 257
           VDAKSR+DY SF+DVVSF
Sbjct: 241 VDAKSRSDYRSFNDVVSF 258

[Close]

BLAST of CmoCh04G006540 vs. TrEMBL
Match: A0A067KDU2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16664 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 2.4e-111
Identity = 203/258 (78.68%), Postives = 224/258 (86.82%), Query Frame = 1


Query: 1   MVDVVAEMHDRDDGIVSLPKDI--LFEGDIDFEPRSGIEFESHEAAYTFYQEYAKSMGFT 60
           MVDV+ E  + D G+ + PK    +FE   DFEP +GIEFESHEAAY+FYQEYAKSMGFT
Sbjct: 29  MVDVMDEAQNGDGGVANYPKTAVAMFEESTDFEPGNGIEFESHEAAYSFYQEYAKSMGFT 88

Query: 61  TSIKNSRRSKKSKEFIDAKFACSRYGVTPESENGNSRRPSVKKTDCKASMHVKRRPDGRW 120
           TSIKNSRRSKKSKEFIDAKFACSRYGVTPE++  NSRR SVKKTDCKASMHVKRRPDG+W
Sbjct: 89  TSIKNSRRSKKSKEFIDAKFACSRYGVTPETDGSNSRRSSVKKTDCKASMHVKRRPDGKW 148

Query: 121 IIHEFIKDHNHEFLPALAYHFRIHRNVKLAEKNNIVILHAVSERTRRMYVEMSKKRGVYR 180
           IIHEF+K+HNHE LPALAYHFRIHRNVKLAEKNNI ILHAVSERTR+MYVEM ++ G  +
Sbjct: 149 IIHEFVKEHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRKMYVEMLRQSGGCQ 208

Query: 181 NVGFPQIDTTYQFNKGQYLALDEGDAQVLLEYFKRIQKENPYFFYAIDLNEEQRLRNLFW 240
           N  F Q D   QF KG++LALD+GDAQ LLEYFKRI+KENP FFYAIDLNEEQRLRNLFW
Sbjct: 209 NFAFVQSDINSQFEKGRHLALDDGDAQALLEYFKRIKKENPNFFYAIDLNEEQRLRNLFW 268

Query: 241 VDAKSRNDYVSFSDVVSF 257
           VDAKSRNDY+SFSDVVSF
Sbjct: 269 VDAKSRNDYISFSDVVSF 286

[Close]

BLAST of CmoCh04G006540 vs. TrEMBL
Match: A0A061DMC6_THECC (FRS (FAR1 Related Sequences) transcription factor family OS=Theobroma cacao GN=TCM_002030 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 6.9e-111
Identity = 206/259 (79.54%), Postives = 227/259 (87.64%), Query Frame = 1


Query: 1   MVDVVAEM-HDRDDGIVSLPKDIL--FEGDIDFEPRSGIEFESHEAAYTFYQEYAKSMGF 60
           MVD+V E  H RD  IV   K  +  FEGD DFEPR+GIEFESHEAAY FYQEYAKSMGF
Sbjct: 31  MVDIVDEAAHGRDGAIVDSSKRAVIGFEGDTDFEPRNGIEFESHEAAYAFYQEYAKSMGF 90

Query: 61  TTSIKNSRRSKKSKEFIDAKFACSRYGVTPESENGNSRRPSVKKTDCKASMHVKRRPDGR 120
           TTSIKNSRRSKKSKEFIDAKFACSRYGVTPES+ G+SRR SVKKTDCKASMHVKRRPDG+
Sbjct: 91  TTSIKNSRRSKKSKEFIDAKFACSRYGVTPESDVGSSRRSSVKKTDCKASMHVKRRPDGK 150

Query: 121 WIIHEFIKDHNHEFLPALAYHFRIHRNVKLAEKNNIVILHAVSERTRRMYVEMSKKRGVY 180
           WIIHEF+K+HNHE LPALAYHFRI+RNVKLAEKNNI IL+AVSERTR+MYVEMS++ G Y
Sbjct: 151 WIIHEFVKEHNHELLPALAYHFRIYRNVKLAEKNNIDILNAVSERTRKMYVEMSRQSGGY 210

Query: 181 RNVGFPQIDTTYQFNKGQYLALDEGDAQVLLEYFKRIQKENPYFFYAIDLNEEQRLRNLF 240
           +NV   Q D   QF+KG++L +DEGDAQ++LEYFKRI+KENP FFYAIDLNEEQRLRNLF
Sbjct: 211 QNVSLLQNDIKDQFDKGRHLVVDEGDAQIMLEYFKRIKKENPDFFYAIDLNEEQRLRNLF 270

Query: 241 WVDAKSRNDYVSFSDVVSF 257
           WVDAKSR DY SFSDVVSF
Sbjct: 271 WVDAKSRKDYASFSDVVSF 289

[Close]

BLAST of CmoCh04G006540 vs. TAIR10
Match: AT4G15090.1 (AT4G15090.1 FRS (FAR1 Related Sequences) transcription factor family)

HSP 1 Score: 397.1 bits (1019), Expect = 8.1e-111
Identity = 199/263 (75.67%), Postives = 232/263 (88.21%), Query Frame = 1


Query: 1   MVDVVAEMH-DRDDGIV---SLPKDILFEGDIDFEPRSGIEFESHEAAYTFYQEYAKSMG 60
           MVD+V E H +RD GIV   ++  D+ F GD+D EPR+GI+F++HEAAY FYQEYAKSMG
Sbjct: 16  MVDIVVEPHSNRDIGIVDEFNIGGDVGFSGDLDLEPRNGIDFDTHEAAYIFYQEYAKSMG 75

Query: 61  FTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESENG--NSRRPSVKKTDCKASMHVKRRP 120
           FTTSIKNSRRSKK+K+FIDAKFACSRYGVTPESE+   +SRR +VKKTDCKASMHVKRRP
Sbjct: 76  FTTSIKNSRRSKKTKDFIDAKFACSRYGVTPESESSGSSSRRSTVKKTDCKASMHVKRRP 135

Query: 121 DGRWIIHEFIKDHNHEFLPALAYHFRIHRNVKLAEKNNIVILHAVSERTRRMYVEMSKKR 180
           DG+WIIHEF+KDHNHE LPALAYHFRI RNVKLAEKNNI ILHAVSERT++MYVEMS++ 
Sbjct: 136 DGKWIIHEFVKDHNHELLPALAYHFRIQRNVKLAEKNNIDILHAVSERTKKMYVEMSRQS 195

Query: 181 GVYRNVG-FPQIDTTYQFNKGQYLALDEGDAQVLLEYFKRIQKENPYFFYAIDLNEEQRL 240
           G Y+N+G   Q D + Q +KG+YLAL+EGD+QVLLEYFKRI+KENP FFYAIDLNE+QRL
Sbjct: 196 GGYKNIGSLLQTDVSSQVDKGRYLALEEGDSQVLLEYFKRIKKENPKFFYAIDLNEDQRL 255

Query: 241 RNLFWVDAKSRNDYVSFSDVVSF 257
           RNLFW DAKSR+DY+SF+DVVSF
Sbjct: 256 RNLFWADAKSRDDYLSFNDVVSF 278

[Close]

BLAST of CmoCh04G006540 vs. TAIR10
Match: AT3G22170.1 (AT3G22170.1 far-red elongated hypocotyls 3)

HSP 1 Score: 231.9 bits (590), Expect = 4.5e-61
Identity = 123/270 (45.56%), Postives = 172/270 (63.70%), Query Frame = 1


Query: 3   DVVAEMHDRDDGIVSLPKDILFE--GDIDFEPRSGIEFESHEAAYTFYQEYAKSMGFTTS 62
           DV  E++  D   + +P   L E    ++ EP +G+EFESH  AY+FYQEY+++MGF T+
Sbjct: 39  DVSVEVNTDDSVGMGVPTGELVEYTEGMNLEPLNGMEFESHGEAYSFYQEYSRAMGFNTA 98

Query: 63  IKNSRRSKKSKEFIDAKFACSRYGVTPESENGNSR---------------RPSVKKTDCK 122
           I+NSRRSK ++EFIDAKFACSRYG   E +   +R               R +  KTDCK
Sbjct: 99  IQNSRRSKTTREFIDAKFACSRYGTKREYDKSFNRPRARQSKQDPENMAGRRTCAKTDCK 158

Query: 123 ASMHVKRRPDGRWIIHEFIKDHNHEFLPALAYHFRIHRNVKLAEKNNIVILHAVSERTRR 182
           ASMHVKRRPDG+W+IH F+++HNHE LPA                       AVSE+TR+
Sbjct: 159 ASMHVKRRPDGKWVIHSFVREHNHELLPA----------------------QAVSEQTRK 218

Query: 183 MYVEMSKKRGVYRNVGFPQIDTTYQFNKGQYLALDEGDAQVLLEYFKRIQKENPYFFYAI 242
           +Y  M+K+   Y+ V   + D+   F KG+ L+++ GD ++LL++  R+Q  N  FFYA+
Sbjct: 219 IYAAMAKQFAEYKTVISLKSDSKSSFEKGRTLSVETGDFKILLDFLSRMQSLNSNFFYAV 278

Query: 243 DLNEEQRLRNLFWVDAKSRNDYVSFSDVVS 256
           DL ++QR++N+FWVDAKSR++Y SF DVVS
Sbjct: 279 DLGDDQRVKNVFWVDAKSRHNYGSFCDVVS 286

[Close]

BLAST of CmoCh04G006540 vs. TAIR10
Match: AT1G76320.1 (AT1G76320.1 FAR1-related sequence 4)

HSP 1 Score: 219.5 bits (558), Expect = 2.3e-57
Identity = 111/221 (50.23%), Postives = 152/221 (68.78%), Query Frame = 1


Query: 36  IEFESHEAAYTFYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESENGNSR 95
           +EFE+HE AY FY++YAKS+GF T+  +SRRS+ SKEFIDAKF+C RYG   +S++  + 
Sbjct: 1   MEFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGSKQQSDDAINP 60

Query: 96  RPSVKKTDCKASMHVKRRPDGRWIIHEFIKDHNHEFLPALAYHFRIHRNVKLAEKNNIVI 155
           R S  K  CKASMHVKRRPDG+W ++ F+K+HNH+ LP  A++FR HRN +L + N+  +
Sbjct: 61  RAS-PKIGCKASMHVKRRPDGKWYVYSFVKEHNHDLLPEQAHYFRSHRNTELVKSNDSRL 120

Query: 156 LHAVSERTRRMYVEMSKKRGVYRNVGFPQIDTTYQFNKGQYLALDEGDAQVLLEYFKRIQ 215
                 R +   +   K    Y ++ F       Q +KG+ L LD GDA++LLE+  R+Q
Sbjct: 121 -----RRKKNTPLTDCKHLSAYHDLDFIDGYMRNQHDKGRRLVLDTGDAEILLEFLMRMQ 180

Query: 216 KENPYFFYAIDLNEEQRLRNLFWVDAKSRNDYVSFSDVVSF 257
           +ENP FF+A+D +E+  LRN+FWVDAK   DY SFSDVVSF
Sbjct: 181 EENPKFFFAVDFSEDHLLRNVFWVDAKGIEDYKSFSDVVSF 215

[Close]

BLAST of CmoCh04G006540 vs. TAIR10
Match: AT2G32250.1 (AT2G32250.1 FAR1-related sequence 2)

HSP 1 Score: 172.9 bits (437), Expect = 2.5e-43
Identity = 97/226 (42.92%), Postives = 134/226 (59.29%), Query Frame = 1


Query: 31  EPRSGIEFESHEAAYTFYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESE 90
           E R+G++FES EAAY FY+EYA+S+GF  +IK SRRSK+S +FID K ACSR+G   E  
Sbjct: 37  ELRNGMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFGTKREKA 96

Query: 91  NGNSRRPSVKKTDCKASMHVKRRPDGRWIIHEFIKDHNHEFLPALAYHFRIHRNVKLAEK 150
              + R S  KT CKA +H+KR+ D +W+I+ F+K+HNHE  P                 
Sbjct: 97  TAINPR-SCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHEICPD---------------- 156

Query: 151 NNIVILHAVSERTRRMYVEMSKKRGVYRNVGFPQIDTTYQFNKGQYLALDEGDAQVLLEY 210
                           YV +   RG  +  G   I       KG  LAL+E D ++LLE+
Sbjct: 157 --------------DFYVSV---RGKNKPAGALAI------KKGLQLALEEEDLKLLLEH 216

Query: 211 FKRIQKENPYFFYAIDLNEEQRLRNLFWVDAKSRNDYVSFSDVVSF 257
           F  +Q + P FFYA+D + ++R+RN+FW+DAK+++DY SFSDVV F
Sbjct: 217 FMEMQDKQPGFFYAVDFDSDKRVRNVFWLDAKAKHDYCSFSDVVLF 222

[Close]

BLAST of CmoCh04G006540 vs. TAIR10
Match: AT4G38180.1 (AT4G38180.1 FAR1-related sequence 5)

HSP 1 Score: 161.0 bits (406), Expect = 9.7e-40
Identity = 84/235 (35.74%), Postives = 133/235 (56.60%), Query Frame = 1


Query: 28  IDFEPRSGIEFESHEAAYTFYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTP 87
           +D EP  G+EFES EAA  FY  YA+ +GF+T + +SRRS++    I  +F C++ G   
Sbjct: 69  LDLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRN 128

Query: 88  ESENGNS----RRP-SVKKTDCKASMHVKRRPDGRWIIHEFIKDHNHEFLPALAYH-FRI 147
            +E        +RP ++ +  CKAS+ VK +  G+W++  F+KDHNHE +P    H  R 
Sbjct: 129 MNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPDQVHCLRS 188

Query: 148 HRNVKLAEKNNIVILHAVSERTRRMYVEMSKKRGVYRNVGFPQIDTTYQFNKGQYLALDE 207
           HR +    K  I  L A     RR+   + K+ G    VGF ++D        +  ++ E
Sbjct: 189 HRQISGPAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQKSI-E 248

Query: 208 GDAQVLLEYFKRIQKENPYFFYAIDLNEEQRLRNLFWVDAKSRNDYVSFSDVVSF 257
           G+ Q+LL+Y +++  +NP FFY++  +E+Q + N+FW D K+  D+  F D V+F
Sbjct: 249 GEIQLLLDYLRQMNADNPNFFYSVQGSEDQSVGNVFWADPKAIMDFTHFGDTVTF 302

[Close]

BLAST of CmoCh04G006540 vs. NCBI nr
Match: gi|449459996|ref|XP_004147732.1| (PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 [Cucumis sativus])

HSP 1 Score: 476.1 bits (1224), Expect = 3.9e-131
Identity = 238/257 (92.61%), Postives = 246/257 (95.72%), Query Frame = 1


Query: 1   MVDVVAEMHDRDDGIVSLPK-DILFEGDIDFEPRSGIEFESHEAAYTFYQEYAKSMGFTT 60
           MVDVVAEM DR  GIVSLPK DILFEGD+DFEP +GIEFESHEAAYTFYQEYAKSMGFTT
Sbjct: 1   MVDVVAEMQDRG-GIVSLPKKDILFEGDVDFEPHTGIEFESHEAAYTFYQEYAKSMGFTT 60

Query: 61  SIKNSRRSKKSKEFIDAKFACSRYGVTPESENGNSRRPSVKKTDCKASMHVKRRPDGRWI 120
           SIKNSRRSKKSKEFIDAKFACSRYGVTPESE+GNSRRPSVKKTDCKASMHVKRRPDGRWI
Sbjct: 61  SIKNSRRSKKSKEFIDAKFACSRYGVTPESESGNSRRPSVKKTDCKASMHVKRRPDGRWI 120

Query: 121 IHEFIKDHNHEFLPALAYHFRIHRNVKLAEKNNIVILHAVSERTRRMYVEMSKKRGVYRN 180
           IHEFIKDHNHE LPALAYHFRIHRNVKLAEKNNI ILHAVSERTRRMYVEMSK+ G YRN
Sbjct: 121 IHEFIKDHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRRMYVEMSKQCGGYRN 180

Query: 181 VGFPQIDTTYQFNKGQYLALDEGDAQVLLEYFKRIQKENPYFFYAIDLNEEQRLRNLFWV 240
             FPQIDTTYQF+KG+YLALDEGDAQ+LLEYFKR+QKENPYFFYAIDLNEEQRLRNLFWV
Sbjct: 181 FSFPQIDTTYQFDKGRYLALDEGDAQMLLEYFKRVQKENPYFFYAIDLNEEQRLRNLFWV 240

Query: 241 DAKSRNDYVSFSDVVSF 257
           DAKSRNDYVSFSDVVSF
Sbjct: 241 DAKSRNDYVSFSDVVSF 256

[Close]

BLAST of CmoCh04G006540 vs. NCBI nr
Match: gi|659101978|ref|XP_008451890.1| (PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 [Cucumis melo])

HSP 1 Score: 472.2 bits (1214), Expect = 5.6e-130
Identity = 234/257 (91.05%), Postives = 244/257 (94.94%), Query Frame = 1


Query: 1   MVDVVAEMHDRDDGIVSLPK-DILFEGDIDFEPRSGIEFESHEAAYTFYQEYAKSMGFTT 60
           MVDVVAEM D +  IVSLPK DILFEGD+DFEP +GIEFESHEAAYTFYQEYAKSMGFTT
Sbjct: 1   MVDVVAEMQDTEGAIVSLPKKDILFEGDVDFEPHTGIEFESHEAAYTFYQEYAKSMGFTT 60

Query: 61  SIKNSRRSKKSKEFIDAKFACSRYGVTPESENGNSRRPSVKKTDCKASMHVKRRPDGRWI 120
           SIKNSRRSKKSKEFIDAKFACSRYGVTPESE+GNSRRPSVKKTDCKASMHVKRRPDGRWI
Sbjct: 61  SIKNSRRSKKSKEFIDAKFACSRYGVTPESESGNSRRPSVKKTDCKASMHVKRRPDGRWI 120

Query: 121 IHEFIKDHNHEFLPALAYHFRIHRNVKLAEKNNIVILHAVSERTRRMYVEMSKKRGVYRN 180
           IHEFIKDHNHE LPALAYHFRIHRNVKLAEKNNI ILHAVSERTRRMYVEMSK+ G YRN
Sbjct: 121 IHEFIKDHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRRMYVEMSKQCGGYRN 180

Query: 181 VGFPQIDTTYQFNKGQYLALDEGDAQVLLEYFKRIQKENPYFFYAIDLNEEQRLRNLFWV 240
             FPQI++TYQF+KG+YLALDEGDAQ+LLEYFKRIQKENPYFFYAIDLNEEQRLRNLFWV
Sbjct: 181 FSFPQIESTYQFDKGRYLALDEGDAQILLEYFKRIQKENPYFFYAIDLNEEQRLRNLFWV 240

Query: 241 DAKSRNDYVSFSDVVSF 257
           DAKSRNDY SFSDVVSF
Sbjct: 241 DAKSRNDYPSFSDVVSF 257

[Close]

BLAST of CmoCh04G006540 vs. NCBI nr
Match: gi|1009127841|ref|XP_015880908.1| (PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 [Ziziphus jujuba])

HSP 1 Score: 427.2 bits (1097), Expect = 2.1e-116
Identity = 208/258 (80.62%), Postives = 235/258 (91.09%), Query Frame = 1


Query: 1   MVDVVAEMHDRDDGIVSLPKD--ILFEGDIDFEPRSGIEFESHEAAYTFYQEYAKSMGFT 60
           M+ V+  +H+RD G++S PK   ++FEGD DFEP +GIEFESHEAAY+FYQEYAKSMGFT
Sbjct: 27  MIVVMDGVHNRDGGLLSSPKRDVVMFEGDTDFEPCNGIEFESHEAAYSFYQEYAKSMGFT 86

Query: 61  TSIKNSRRSKKSKEFIDAKFACSRYGVTPESENGNSRRPSVKKTDCKASMHVKRRPDGRW 120
           TSIKNSRRSKKSKEFIDAKFACSRYGVTPES+ G+SRRPSVKKTDCKASMHVKRR DG+W
Sbjct: 87  TSIKNSRRSKKSKEFIDAKFACSRYGVTPESDGGSSRRPSVKKTDCKASMHVKRRSDGKW 146

Query: 121 IIHEFIKDHNHEFLPALAYHFRIHRNVKLAEKNNIVILHAVSERTRRMYVEMSKKRGVYR 180
           IIHEFIK+HNHE LPALAYHFRIHRNVKL EKNNI ILHAVSERTR+MYVEMS++ G Y+
Sbjct: 147 IIHEFIKEHNHELLPALAYHFRIHRNVKLVEKNNIDILHAVSERTRKMYVEMSRQSGGYQ 206

Query: 181 NVGFPQIDTTYQFNKGQYLALDEGDAQVLLEYFKRIQKENPYFFYAIDLNEEQRLRNLFW 240
           N+GF + +T +QF+KG+YL L+EGDAQVLLEYFKRIQKENP FFYAIDLNEEQR+RNLFW
Sbjct: 207 NIGFVRAETDFQFDKGRYLGLEEGDAQVLLEYFKRIQKENPNFFYAIDLNEEQRVRNLFW 266

Query: 241 VDAKSRNDYVSFSDVVSF 257
           VDAKSR+DY SFSDVVSF
Sbjct: 267 VDAKSRSDYASFSDVVSF 284

[Close]

BLAST of CmoCh04G006540 vs. NCBI nr
Match: gi|694446432|ref|XP_009349573.1| (PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 416.8 bits (1070), Expect = 2.8e-113
Identity = 207/258 (80.23%), Postives = 232/258 (89.92%), Query Frame = 1


Query: 1   MVDVVAEMHDRDDGIVSLP-KDI-LFEGDIDFEPRSGIEFESHEAAYTFYQEYAKSMGFT 60
           MV V  E+ +R  G+++ P KD+ +FEG+ DFEP +GIEFESHEAAY+FYQEYAKSMGFT
Sbjct: 29  MVAVAEEVQNRGGGVITSPEKDVQVFEGEADFEPCNGIEFESHEAAYSFYQEYAKSMGFT 88

Query: 61  TSIKNSRRSKKSKEFIDAKFACSRYGVTPESENGNSRRPSVKKTDCKASMHVKRRPDGRW 120
           TSIKNSRRSKKSKEFIDAKFACSRYGVTPES++G SRRP+VKKTDCKASMHVKRR DG+W
Sbjct: 89  TSIKNSRRSKKSKEFIDAKFACSRYGVTPESDSGTSRRPTVKKTDCKASMHVKRRADGKW 148

Query: 121 IIHEFIKDHNHEFLPALAYHFRIHRNVKLAEKNNIVILHAVSERTRRMYVEMSKKRGVYR 180
           IIHEFIK+HNHE LPALAYHFRIHRNVKLAEKNNI ILHAVSERTR+MYVEMS+  G Y+
Sbjct: 149 IIHEFIKEHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRKMYVEMSRHSGGYQ 208

Query: 181 NVGFPQIDTTYQFNKGQYLALDEGDAQVLLEYFKRIQKENPYFFYAIDLNEEQRLRNLFW 240
           + GFPQ DT YQF+K + L+LD GDAQV+LEYFKRIQKENP FFYAIDLNEEQRLRNLFW
Sbjct: 209 STGFPQADTNYQFDKCRDLSLDLGDAQVMLEYFKRIQKENPNFFYAIDLNEEQRLRNLFW 268

Query: 241 VDAKSRNDYVSFSDVVSF 257
           VDAKSR+DY SF+DVVSF
Sbjct: 269 VDAKSRSDYKSFNDVVSF 286

[Close]

BLAST of CmoCh04G006540 vs. NCBI nr
Match: gi|694446428|ref|XP_009349572.1| (PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 416.8 bits (1070), Expect = 2.8e-113
Identity = 207/258 (80.23%), Postives = 232/258 (89.92%), Query Frame = 1


Query: 1   MVDVVAEMHDRDDGIVSLP-KDI-LFEGDIDFEPRSGIEFESHEAAYTFYQEYAKSMGFT 60
           MV V  E+ +R  G+++ P KD+ +FEG+ DFEP +GIEFESHEAAY+FYQEYAKSMGFT
Sbjct: 29  MVAVAEEVQNRGGGVITSPEKDVQVFEGEADFEPCNGIEFESHEAAYSFYQEYAKSMGFT 88

Query: 61  TSIKNSRRSKKSKEFIDAKFACSRYGVTPESENGNSRRPSVKKTDCKASMHVKRRPDGRW 120
           TSIKNSRRSKKSKEFIDAKFACSRYGVTPES++G SRRP+VKKTDCKASMHVKRR DG+W
Sbjct: 89  TSIKNSRRSKKSKEFIDAKFACSRYGVTPESDSGTSRRPTVKKTDCKASMHVKRRADGKW 148

Query: 121 IIHEFIKDHNHEFLPALAYHFRIHRNVKLAEKNNIVILHAVSERTRRMYVEMSKKRGVYR 180
           IIHEFIK+HNHE LPALAYHFRIHRNVKLAEKNNI ILHAVSERTR+MYVEMS+  G Y+
Sbjct: 149 IIHEFIKEHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRKMYVEMSRHSGGYQ 208

Query: 181 NVGFPQIDTTYQFNKGQYLALDEGDAQVLLEYFKRIQKENPYFFYAIDLNEEQRLRNLFW 240
           + GFPQ DT YQF+K + L+LD GDAQV+LEYFKRIQKENP FFYAIDLNEEQRLRNLFW
Sbjct: 209 STGFPQADTNYQFDKCRDLSLDLGDAQVMLEYFKRIQKENPNFFYAIDLNEEQRLRNLFW 268

Query: 241 VDAKSRNDYVSFSDVVSF 257
           VDAKSR+DY SF+DVVSF
Sbjct: 269 VDAKSRSDYKSFNDVVSF 286

The following BLAST results are available for this feature:

BLAST of CmoCh04G006540 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FAR1_ARATH	1.4e-109	75.67	Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1 PE=1 SV=1	[more]
FHY3_ARATH	8.0e-60	45.56	Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana GN=FHY3 PE=1 SV=1	[more]
FRS4_ARATH	4.1e-56	50.23	Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana GN=FRS4 PE=2 SV=2	[more]
FRS2_ARATH	4.4e-42	42.92	Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=FRS2 PE=1 SV=1	[more]
FRS5_ARATH	1.7e-38	35.74	Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5 PE=2 SV=1	[more]

BLAST of CmoCh04G006540 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXC8_CUCSA	2.7e-131	92.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056770 PE=4 SV=1	[more]
F6HTN0_VITVI	1.3e-112	80.69	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0017g01810 PE=4 SV=...	[more]
M5XA11_PRUPE	2.1e-112	80.23	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001511mg PE=4 SV=1	[more]
A0A067KDU2_JATCU	2.4e-111	78.68	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16664 PE=4 SV=1	[more]
A0A061DMC6_THECC	6.9e-111	79.54	FRS (FAR1 Related Sequences) transcription factor family OS=Theobroma cacao GN=T...	[more]

BLAST of CmoCh04G006540 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G15090.1	8.1e-111	75.67	FRS (FAR1 Related Sequences) transcription factor family	[more]
AT3G22170.1	4.5e-61	45.56	far-red elongated hypocotyls 3	[more]
AT1G76320.1	2.3e-57	50.23	FAR1-related sequence 4	[more]
AT2G32250.1	2.5e-43	42.92	FAR1-related sequence 2	[more]
AT4G38180.1	9.7e-40	35.74	FAR1-related sequence 5	[more]

BLAST of CmoCh04G006540 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449459996\|ref\|XP_004147732.1\|	3.9e-131	92.61	PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 [Cucumis sativus]	[more]
gi\|659101978\|ref\|XP_008451890.1\|	5.6e-130	91.05	PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 [Cucumis melo]	[more]
gi\|1009127841\|ref\|XP_015880908.1\|	2.1e-116	80.62	PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 [Ziziphus jujuba]	[more]
gi\|694446432\|ref\|XP_009349573.1\|	2.8e-113	80.23	PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 isoform X2 [Pyrus x bretschneider...	[more]
gi\|694446428\|ref\|XP_009349572.1\|	2.8e-113	80.23	PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 isoform X1 [Pyrus x bretschneider...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004330	FAR1_DNA_bnd_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010018	far-red light signaling pathway
biological_process	GO:0042753	positive regulation of circadian rhythm
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G006540.1	CmoCh04G006540.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004330	FAR1 DNA binding domain	PFAM	PF03101	FAR1	coord: 47..133 score: 2.4
None	No IPR available	PANTHER	PTHR31669:SF21	PROTEIN FAR-RED IMPAIRED RESPONSE 1	coord: 1..256 score: 9.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G006540	Csa4G056780	Cucumber (Chinese Long) v2	cmocuB699
CmoCh04G006540	Cp4.1LG14g03040	Cucurbita pepo (Zucchini)	cmocpeB670
CmoCh04G006540	Carg13132	Silver-seed gourd	carcmoB0058

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G006540	Cucumber (Gy14) v2	cgybcmoB515
CmoCh04G006540	Melon (DHL92) v3.6.1	cmomedB780
CmoCh04G006540	Silver-seed gourd	carcmoB0902
CmoCh04G006540	Cucumber (Chinese Long) v3	cmocucB0827
CmoCh04G006540	Watermelon (97103) v2	cmowmbB756
CmoCh04G006540	Wax gourd	cmowgoB0844
CmoCh04G006540	Cucurbita moschata (Rifu)	cmocmoB288
CmoCh04G006540	Cucumber (Gy14) v1	cgycmoB0512
CmoCh04G006540	Cucurbita maxima (Rimu)	cmacmoB340
CmoCh04G006540	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G006540	Wild cucumber (PI 183967)	cmocpiB707
CmoCh04G006540	Melon (DHL92) v3.5.1	cmomeB687
CmoCh04G006540	Melon (DHL92) v3.5.1	cmomeB697
CmoCh04G006540	Watermelon (Charleston Gray)	cmowcgB677
CmoCh04G006540	Watermelon (97103) v1	cmowmB686
CmoCh04G006540	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G006540	Bottle gourd (USVL1VR-Ls)	cmolsiB689